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Screening Anti-inflammatory, Anticoagulant, and Respiratory Agents for SARS-CoV-2 3CLpro Inhibition from Chemical Fingerprints Through a Deep Learning Approach. 通过深度学习方法从化学指纹中筛选抗炎、抗凝和呼吸药物对SARS-CoV-2 3CLpro的抑制作用
IF 1.4 4区 医学 Q2 Medicine Pub Date : 2022-01-03 DOI: 10.24875/RIC.21000282
Elena Caires Silveira

Background: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the etiologic agent of coronavirus disease 2019 (COVID-19), triggers a pathophysiological process linked not only to viral mechanisms of infectivity, but also to the pattern of host response. Drug repurposing is a promising strategy for rapid identification of treatments for SARS-CoV-2 infection, and several attractive molecular viral targets can be exploited. Among those, 3CL protease is a potential target of great interest.

Objective: The objective of the study was to screen potential 3CLpro inhibitors compounds based on chemical fingerprints among anti-inflammatory, anticoagulant, and respiratory system agents.

Methods: The screening was developed based on a drug property prediction framework, in which the evaluated property was the ability to inhibit the activity of the 3CLpro protein, and the predictions were performed using a dense neural network trained and validated on bioassay data.

Results: On the validation and test set, the model obtained area under the curve values of 98.2 and 76.3, respectively, demonstrating high specificity for both sets (98.5% and 94.7%). Regarding the 1278 compounds screened, the model indicated four anti-inflammatory agents, two anticoagulants, and one respiratory agent as potential 3CLpro inhibitors.

Conclusions: Those findings point to a possible desirable synergistic effect in the management of patients with COVID-19 and provide potential directions for in vitro and in vivo research, which are indispensable for the validation of their results.

背景:严重急性呼吸综合征冠状病毒2型(SARS-CoV-2)是2019冠状病毒病(COVID-19)的病原,它触发的病理生理过程不仅与病毒感染机制有关,而且与宿主反应模式有关。药物再利用是快速识别SARS-CoV-2感染治疗方法的一种很有前途的策略,并且可以利用几个有吸引力的分子病毒靶点。其中,3CL蛋白酶是一个非常有趣的潜在靶点。目的:基于化学指纹图谱在抗炎、抗凝血和呼吸系统药物中筛选潜在的3CLpro抑制剂化合物。方法:筛选基于药物性质预测框架,其中评估的性质是抑制3CLpro蛋白活性的能力,并使用密集神经网络进行预测,并根据生物测定数据进行训练和验证。结果:在验证集和测试集上,模型曲线下面积分别为98.2和76.3,特异性均较高(98.5%和94.7%)。在筛选的1278种化合物中,该模型显示四种抗炎药、两种抗凝血药和一种呼吸药是潜在的3CLpro抑制剂。结论:这些发现为新冠肺炎患者的治疗提供了可能的协同效应,并为体外和体内研究提供了潜在的方向,这对验证其结果是必不可少的。
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引用次数: 1
Adaptation to Moderate Altitude Hypoxemia: The Example of the Valley of Mexico. 适应中等海拔低氧血症:以墨西哥河谷为例。
IF 1.4 4区 医学 Q2 Medicine Pub Date : 2022-01-03 DOI: 10.24875/RIC.21000159
José R Pérez-Padilla

A large world population resides at moderate altitude. In the Valley of Mexico (2,240 m above sea level), its inhabitants, breathe approximately 29% more on average and have 10% increased hemoglobin concentrations compared to sea level residents, among other differences. These compensations reduce but not eliminate the impact of altitude hypoxemia. The objective of the manuscript is to review and describe the information available on health and disease at moderate altitudes, mainly with data in Spanish language from Latin-American countries. Young adults in Mexico City have an SaO2 between 92% and 94% versus 97% at sea level, frequently decreasing below 90% during sleep and intense exercise. It is likely that among the population living at this altitude, lung growth, and development during pregnancy and infancy are enhanced, and that after residing for several tens of thousands of years, more important adaptations in oxygen transport and utilization have developed, but we are not certain about it. For patients with respiratory diseases, residing at moderate altitudes implies increased hypoxemia and clinical deterioration, unless supplementary oxygen is prescribed or patients move to sea level. Hyperventilation increases exposure of residents to air pollutants compared to those living in cities with similar concentrations of pollutants, although at sea level. Humans evolved at sea level and lack the best-known adaptations to reside at moderate or high altitudes. Residents of moderate altitudes breathe deeply the city´s air with all its pollutants, and more often require supplementary oxygen.

世界上有大量人口居住在中等海拔地区。在墨西哥谷(海拔2240米),与海平面居民相比,其居民平均多呼吸约29%,血红蛋白浓度增加10%,以及其他差异。这些补偿减少但不能消除高原低氧血症的影响。该手稿的目的是审查和描述关于中等海拔地区健康和疾病的现有信息,主要使用拉丁美洲国家的西班牙语数据。墨西哥城年轻人的SaO2含量在92%至94%之间,而海平面为97%,在睡眠和剧烈运动期间经常降至90%以下。可能生活在这个海拔高度的人群,在怀孕和婴儿期肺部的生长和发育得到了加强,并且在居住了数万年之后,在氧气运输和利用方面发展了更重要的适应,但我们不确定。对于呼吸系统疾病患者,居住在中等海拔地区意味着低氧血症加重和临床恶化,除非处方补充氧气或患者搬到海平面。与那些生活在污染物浓度相似的城市中的人相比,过度换气会增加居民接触空气污染物的机会,尽管污染物浓度在海平面上。人类是在海平面上进化的,缺乏众所周知的适应中海拔或高海拔地区生活的能力。中等海拔地区的居民深深呼吸着含有污染物的城市空气,而且更多时候需要补充氧气。
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引用次数: 3
Cardiovascular Risk Prediction Models in People Living with HIV in Colombia. 哥伦比亚艾滋病毒感染者心血管风险预测模型
IF 1.4 4区 医学 Q2 Medicine Pub Date : 2022-01-03 DOI: 10.24875/RIC.21000251
Angel A García-Peña, Esther De-Vries, Jairo Aldana-Bitar, Edward Cáceres, Juan Botero, Juan Vásquez-Jiménez, Roberto Tamara, Peter Olejua

Background: People living with HIV are at increased risk of cardiovascular disease. Cardiovascular risk (CVR) prediction scores are powerful tools for individualized assessment that inform decision-making about follow-up frequency, hypolipemiant treatment intensification, and choice antiretroviral therapy.

Objectives: The objectives of the study were to evaluate the performance of multiple cardiovascular assessment scores in predicting major adverse cardiovascular events (MACE) at 5 and 10 years. Framingham (2004, 2008, and Colombia-adjusted), SCORE, PROCAM, ASCVD, and D:A:D scores were included in the analysis.

Methods: Data were obtained from a medical registry of adults living with HIV attended by a teaching hospital in Colombia. All patients with complete information necessary for risk score calculations and determination of MACE at 5 and 10 years were included in the study. Receiver operating characteristic curves (ROC) were generated using calculations with all the aforementioned models for every individual. Differences between curves were compared with De- Long's test.

Results: A total of 808 patients were included in the analysis. Mean age was 35 years, and 12% were female. The majority of subjects had low and very low CVR. Eight MACE occurred during follow-up. Area under ROC curves were: Framingham (0.90), Framingham ATP3 (0.92), Framingham calibrated for Colombia (0.90), SCORE (0.92), PROCAM (0.92), ASCVD (0.89), and D:A:D (0.92), with no statistically significant differences.

Conclusions: The evaluated scores had an acceptable performance for HIV-infected patients in the studied cohort, especially for those in low and very low risk categories.

背景:艾滋病毒感染者患心血管疾病的风险增加。心血管风险(CVR)预测评分是个性化评估的有力工具,可为随访频率、低血压治疗强化和选择抗逆转录病毒治疗提供决策信息。目的:本研究的目的是评估多种心血管评估评分在预测5年和10年主要心血管不良事件(MACE)方面的表现。分析包括Framingham(2004、2008和哥伦比亚调整)、SCORE、PROCAM、ASCVD和D:A:D评分。方法:数据来自哥伦比亚一家教学医院的成人艾滋病毒感染者医疗登记。所有具有风险评分计算和确定5年和10年MACE所需的完整信息的患者都被纳入研究。使用上述所有模型计算每个个体的受试者工作特征曲线(ROC)。用德龙检验法比较曲线间的差异。结果:共纳入808例患者。平均年龄35岁,女性占12%。大多数受试者的CVR较低或极低。随访期间发生8例MACE。ROC曲线下面积分别为:Framingham(0.90)、Framingham ATP3(0.92)、Framingham校准哥伦比亚(0.90)、SCORE(0.92)、PROCAM(0.92)、ASCVD(0.89)、D:A:D(0.92),差异无统计学意义。结论:在研究队列中,评估得分对于hiv感染患者具有可接受的表现,特别是对于那些处于低风险和极低风险类别的患者。
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引用次数: 1
Activation of CTHRC1 by HOXB9 Promotes Angiogenesis through Fatty Acid Metabolism in Lung Adenocarcinoma. HOXB9激活CTHRC1通过脂肪酸代谢促进肺腺癌血管生成
IF 1.4 4区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.24875/RIC.23000023
Keqi Liu, Xiaomin Li, Zhouzhou Yang, Rong Zhang

Background: CTHRC1 is highly expressed in various cancers.

Objectives: The aim of the study was to study the role of CTHRC1 played in lung adenocarcinoma (LUAD) development and its underlying biological functions.

Methods: Enriched pathways and upstream transcription factors of CTHRC1 were explored by bioinformatics analysis. Dual-luciferase assay and Chromatin immunoprecipitation assay were used to verify the binding relationship between CTHRC1 and HOXB9. CCK-8 was utilized to detect cell viability. Expression levels of CTHRC1, HOXB9, and angiogenesis-related genes were assessed by quantitative real time-polymerase chain reaction. Angiogenesis assay was used to detect angiogenesis ability. Quantitative analysis of metabolites were used to detect the accumulation of neutral lipids, the levels of free fatty acids (FAs), and glycerol. Western blot was conducted to measure expression of metabolic enzymes of FA.

Results: CTHRC1 was enriched in FA metabolic pathway, which was positively correlated and bound with HOXB9. CTHRC1 and HOXB9 expression was remarkably up-regulated in LUAD cells. Overexpression of CTHRC1 promoted FA metabolic pathway and angiogenesis, and FA inhibitor Orlistat restored it to NC group level. Meanwhile, CTHRC1 affected LUAD angiogenesis by activating HOXB9 to regulate FA metabolism.

Conclusions: This study found that activation of CTHRC1 by HOXB9 induces angiogenesis by mediating FA metabolism. CTHRC1 may be a potential target for LUAD diagnosis.

背景:CTHRC1在多种癌症中高表达。目的:本研究的目的是研究CTHRC1在肺腺癌(LUAD)发展中的作用及其潜在的生物学功能。方法:通过生物信息学分析,探索CTHRC1的富集途径和上游转录因子。采用双荧光素酶法和染色质免疫沉淀法验证CTHRC1与HOXB9的结合关系。CCK-8检测细胞活力。定量实时聚合酶链反应检测CTHRC1、HOXB9及血管生成相关基因的表达水平。血管生成实验检测血管生成能力。代谢物的定量分析用于检测中性脂的积累,游离脂肪酸(FAs)和甘油的水平。Western blot检测FA代谢酶的表达。结果:CTHRC1在FA代谢途径中富集,与HOXB9正相关并结合。在LUAD细胞中,CTHRC1和HOXB9的表达显著上调。CTHRC1过表达促进了FA代谢途径和血管生成,FA抑制剂奥利司他使其恢复到NC组水平。同时,CTHRC1通过激活HOXB9调节FA代谢,影响LUAD血管生成。结论:本研究发现HOXB9激活CTHRC1通过介导FA代谢诱导血管生成。CTHRC1可能是LUAD诊断的潜在靶点。
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引用次数: 0
Telomeres Length Variations in a Rheumatoid Arthritis Patients Cohort at Early Disease Onset and after Follow-Up. 类风湿关节炎患者早期发病和随访后的端粒长度变化。
IF 1.4 4区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.24875/RIC.22000048
Yevgeniya Svyryd, Virginia Pascual-Ramos, Irazú Contreras-Yañez, Luís A Muñoz-Tellez, Leonora Luna-Muñoz, María A López-Hernández, Adolfo Aguayo-Gómez, Osvaldo M Mutchinick

Background: Rheumatoid arthritis (RA) is an autoimmune disease characterized by chronic synovial joint inflammation, progressive disability, premature immune aging, and telomere length (TL) shortening.

Objectives: The objective of the study was to study TL changes in patients at early disease onset and after follow-up.

Methods: Relative leukocyte TL (rLTL) was measured by quantitative polymerase chain reaction (qPCR) in 88 at-admission patients (AAP) with < 1 year of symptoms onset, self-compared after follow-up, and a reference group of sex- and age-matched healthy individuals. Correlations between rLTL percentage change after variable disease exposure time (DET) and clinical laboratory disease activity markers and treatments were assessed. Non-parametrical statistics were applied, considering < 0.05 p-value significant.

Results: The median (p25, p75) rLTL was lower in patients after DET (0.61, 0.49-0.70) than in AAP (0.64, 0.50-0.77), p = 0.017. Furthermore, telomeres at early stages of RA were shorter than in the reference group (0.77, 0.59-0.92; p = 0.003). HLA-DRB1*04 allele carrier status did not significantly affect rLTL at an early stage and after follow-up. The patients' rLTL shortening was mainly associated with longer at-admission telomeres (OR 16.2, 95%CI: 3.5-74.4; p < 0.0001).

Conclusions: At follow-up, RA patients showed significantly shorter rLTL than AAP, particularly in those AAP with longer telomeres, disregarding disease activity and treatments, denoting an rLTL shortening effect influenced by age, DET, and native rLTL.

背景:类风湿性关节炎(RA)是一种自身免疫性疾病,其特征为慢性滑膜关节炎症、进行性残疾、免疫过早老化和端粒长度(TL)缩短。目的:本研究的目的是研究患者在疾病早期发病和随访后的TL变化。方法:采用定量聚合酶链反应(qPCR)测定88例症状出现< 1年的入院患者(AAP)的相对白细胞TL (rLTL),随访后进行自我比较,对照组为性别和年龄匹配的健康个体。评估可变疾病暴露时间(DET)后rLTL百分比变化与临床实验室疾病活动标志物和治疗之间的相关性。考虑p值< 0.05显著,采用非参数统计。结果:DET组患者rLTL中位值(p25, p75)(0.61, 0.49-0.70)低于AAP组(0.64,0.50-0.77),p = 0.017。此外,RA早期端粒比对照组短(0.77,0.59-0.92;P = 0.003)。HLA-DRB1*04等位基因携带者状态在早期和随访后对rLTL无显著影响。患者rLTL缩短主要与入院时端粒变长有关(OR: 16.2, 95%CI: 3.5-74.4;P < 0.0001)。结论:在随访中,RA患者的rLTL明显短于AAP患者,特别是端粒较长的AAP患者,不考虑疾病活动性和治疗,表明rLTL缩短作用受年龄、DET和原生rLTL的影响。
{"title":"Telomeres Length Variations in a Rheumatoid Arthritis Patients Cohort at Early Disease Onset and after Follow-Up.","authors":"Yevgeniya Svyryd,&nbsp;Virginia Pascual-Ramos,&nbsp;Irazú Contreras-Yañez,&nbsp;Luís A Muñoz-Tellez,&nbsp;Leonora Luna-Muñoz,&nbsp;María A López-Hernández,&nbsp;Adolfo Aguayo-Gómez,&nbsp;Osvaldo M Mutchinick","doi":"10.24875/RIC.22000048","DOIUrl":"https://doi.org/10.24875/RIC.22000048","url":null,"abstract":"<p><strong>Background: </strong>Rheumatoid arthritis (RA) is an autoimmune disease characterized by chronic synovial joint inflammation, progressive disability, premature immune aging, and telomere length (TL) shortening.</p><p><strong>Objectives: </strong>The objective of the study was to study TL changes in patients at early disease onset and after follow-up.</p><p><strong>Methods: </strong>Relative leukocyte TL (rLTL) was measured by quantitative polymerase chain reaction (qPCR) in 88 at-admission patients (AAP) with < 1 year of symptoms onset, self-compared after follow-up, and a reference group of sex- and age-matched healthy individuals. Correlations between rLTL percentage change after variable disease exposure time (DET) and clinical laboratory disease activity markers and treatments were assessed. Non-parametrical statistics were applied, considering < 0.05 p-value significant.</p><p><strong>Results: </strong>The median (p25, p75) rLTL was lower in patients after DET (0.61, 0.49-0.70) than in AAP (0.64, 0.50-0.77), p = 0.017. Furthermore, telomeres at early stages of RA were shorter than in the reference group (0.77, 0.59-0.92; p = 0.003). <i>HLA-DRB1*</i>04 allele carrier status did not significantly affect rLTL at an early stage and after follow-up. The patients' rLTL shortening was mainly associated with longer at-admission telomeres (OR 16.2, 95%CI: 3.5-74.4; p < 0.0001).</p><p><strong>Conclusions: </strong>At follow-up, RA patients showed significantly shorter rLTL than AAP, particularly in those AAP with longer telomeres, disregarding disease activity and treatments, denoting an rLTL shortening effect influenced by age, DET, and native rLTL.</p>","PeriodicalId":49612,"journal":{"name":"Revista De Investigacion Clinica-Clinical and Translational Investigation","volume":"74 4","pages":"202-211"},"PeriodicalIF":1.4,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10417513","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Significant Rise in SARS-CoV-2 Reinfection Rate in Vaccinated Hospital Workers during the Omicron Wave: A Prospective Cohort Study. 欧米克隆波期间接种疫苗的医护人员SARS-CoV-2再感染率显著上升:一项前瞻性队列研究
IF 1.4 4区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.24875/RIC.22000159
Eric Ochoa-Hein, Patricia E Leal-Morán, Karen A Nava-Guzmán, Abril T Vargas-Fernández, José F Vargas-Fernández, Fabricio Díaz-Rodríguez, Joel Armando Rayas-Bernal, Ricardo González-González, Pavel Vázquez-González, Martha A Huertas-Jiménez, Sandra Rajme-López, Pilar Ramos-Cervantes, Violeta Ibarra-González, Luis A García-Andrade, Fernando Ledesma-Barrientos, Alfredo Ponce-de-León, José Sifuentes-Osornio, Arturo Galindo-Fraga

Background: Relatively low SARS-CoV-2 reinfection rates have been reported in vaccinated individuals, but updates considering the Omicron variant are lacking.

Objectives: The objective of the study was to provide a current estimate of the SARS-CoV-2 reinfection rate in a highly immunized population.

Methods: A prospective cohort of Mexican hospital workers was followed (March 2020-February 2022). Reinfection was defined as the occurrence of two or more episodes of COVID-19 separated by a period of ≥ 90 days without symptoms. The reinfection rate was calculated as the number of reinfection episodes per 100,000 persons per day.

Results: A total of 3732 medical consultations were provided to 2700 workers, of whom 1388 (51.4%) were confirmed COVID-19 cases. A total of 73 reinfection cases were identified, of whom 71 (97.3%) had completed their primary vaccination series and 22 (30.1%) had had a booster dose before the second episode. The overall reinfection rate was 23.1 per 100,000 persons per day (as compared to a rate of 1.9 per 100,000 persons per day before the Omicron wave).

Conclusions: The SARS-CoV-2 reinfection rate rose significantly during the Omicron wave despite a high primary vaccination coverage rate. Almost one-third of reinfected workers had a vaccine booster ≥ 14 days before the last COVID-19 episode.

背景:据报道,在接种疫苗的个体中,SARS-CoV-2再感染率相对较低,但缺乏考虑到欧米克隆变体的最新情况。目的:本研究的目的是提供高度免疫人群中SARS-CoV-2再感染率的当前估计。方法:对墨西哥医院工作人员进行前瞻性队列研究(2020年3月- 2022年2月)。再感染定义为两次或两次以上的COVID-19发作,间隔≥90天无症状。再感染率以每天每10万人中再感染的次数计算。结果:2700名医护人员共就诊3732次,其中确诊病例1388例(51.4%)。共发现73例再感染病例,其中71例(97.3%)已完成初次接种系列,22例(30.1%)在第二次发作前已接种加强剂。总体再感染率为每天每10万人23.1例(欧米克隆波爆发前为每天每10万人1.9例)。结论:在欧米克隆波期间,尽管初级疫苗接种率较高,但SARS-CoV-2再感染率明显上升。近三分之一的再感染工人在最后一次COVID-19发作前≥14天接种了疫苗增强剂。
{"title":"Significant Rise in SARS-CoV-2 Reinfection Rate in Vaccinated Hospital Workers during the Omicron Wave: A Prospective Cohort Study.","authors":"Eric Ochoa-Hein,&nbsp;Patricia E Leal-Morán,&nbsp;Karen A Nava-Guzmán,&nbsp;Abril T Vargas-Fernández,&nbsp;José F Vargas-Fernández,&nbsp;Fabricio Díaz-Rodríguez,&nbsp;Joel Armando Rayas-Bernal,&nbsp;Ricardo González-González,&nbsp;Pavel Vázquez-González,&nbsp;Martha A Huertas-Jiménez,&nbsp;Sandra Rajme-López,&nbsp;Pilar Ramos-Cervantes,&nbsp;Violeta Ibarra-González,&nbsp;Luis A García-Andrade,&nbsp;Fernando Ledesma-Barrientos,&nbsp;Alfredo Ponce-de-León,&nbsp;José Sifuentes-Osornio,&nbsp;Arturo Galindo-Fraga","doi":"10.24875/RIC.22000159","DOIUrl":"https://doi.org/10.24875/RIC.22000159","url":null,"abstract":"<p><strong>Background: </strong>Relatively low SARS-CoV-2 reinfection rates have been reported in vaccinated individuals, but updates considering the Omicron variant are lacking.</p><p><strong>Objectives: </strong>The objective of the study was to provide a current estimate of the SARS-CoV-2 reinfection rate in a highly immunized population.</p><p><strong>Methods: </strong>A prospective cohort of Mexican hospital workers was followed (March 2020-February 2022). Reinfection was defined as the occurrence of two or more episodes of COVID-19 separated by a period of ≥ 90 days without symptoms. The reinfection rate was calculated as the number of reinfection episodes per 100,000 persons per day.</p><p><strong>Results: </strong>A total of 3732 medical consultations were provided to 2700 workers, of whom 1388 (51.4%) were confirmed COVID-19 cases. A total of 73 reinfection cases were identified, of whom 71 (97.3%) had completed their primary vaccination series and 22 (30.1%) had had a booster dose before the second episode. The overall reinfection rate was 23.1 per 100,000 persons per day (as compared to a rate of 1.9 per 100,000 persons per day before the Omicron wave).</p><p><strong>Conclusions: </strong>The SARS-CoV-2 reinfection rate rose significantly during the Omicron wave despite a high primary vaccination coverage rate. Almost one-third of reinfected workers had a vaccine booster ≥ 14 days before the last COVID-19 episode.</p>","PeriodicalId":49612,"journal":{"name":"Revista De Investigacion Clinica-Clinical and Translational Investigation","volume":" ","pages":"175-180"},"PeriodicalIF":1.4,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"33458091","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Update on Novel Blood-Based Biomarkers for Lupus Nephritis Beyond Diagnostic Approaches. 超越诊断方法的红斑狼疮肾炎新血液生物标志物研究进展
IF 1.4 4区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.24875/RIC.22000209
José L Maravillas-Montero, Raúl F Reyes-Huerta

Abstract: Systemic lupus erythematosus (SLE) is a chronic inflammatory autoimmune disease with a wide range of clinical presentations. Lupus nephritis (LN) is a frequent complication of SLE, representing a significant cause of morbidity and mortality in these patients. In addition, LN diagnosis remains suboptimal in most clinical contexts. The current gold standard for LN clinical diagnosis is a renal biopsy. Still, the invasiveness of this technique is an obstacle to the early detection of renal involvement and further monitoring of treatment results. Consequently, there are different areas for improvement in the field of LN, such as the search for novel non-invasive clinical biomarkers with an adequate correlation between clinical manifestations and actual histological damage. Although urine component-related studies are promising, the more robust blood/serum biomarkers may still be helpful in developing point-of-care systems that can be adapted to most clinical scenarios. Therefore, this brief review aims to highlight and summarize some of the most recently reported non-classical serum/blood potential LN biomarkers. (Rev Invest Clin. 2022;74(5):227-31).

摘要:系统性红斑狼疮(SLE)是一种慢性炎症性自身免疫性疾病,具有广泛的临床表现。狼疮肾炎(LN)是SLE的常见并发症,是SLE患者发病和死亡的重要原因。此外,在大多数临床情况下,LN诊断仍然是次优的。目前LN临床诊断的金标准是肾活检。尽管如此,该技术的侵入性仍是早期发现肾脏受累和进一步监测治疗结果的障碍。因此,LN领域有不同的改进领域,例如寻找新的无创临床生物标志物,在临床表现和实际组织学损伤之间有充分的相关性。尽管尿液成分相关的研究很有希望,但更强大的血液/血清生物标志物可能仍然有助于开发可适应大多数临床情况的即时护理系统。因此,这篇简短的综述旨在强调和总结一些最近报道的非经典血清/血液潜在LN生物标志物。[j] .中国科学:自然科学版,2011;32(5):557 - 557。
{"title":"Update on Novel Blood-Based Biomarkers for Lupus Nephritis Beyond Diagnostic Approaches.","authors":"José L Maravillas-Montero,&nbsp;Raúl F Reyes-Huerta","doi":"10.24875/RIC.22000209","DOIUrl":"https://doi.org/10.24875/RIC.22000209","url":null,"abstract":"<p><strong>Abstract: </strong>Systemic lupus erythematosus (SLE) is a chronic inflammatory autoimmune disease with a wide range of clinical presentations. Lupus nephritis (LN) is a frequent complication of SLE, representing a significant cause of morbidity and mortality in these patients. In addition, LN diagnosis remains suboptimal in most clinical contexts. The current gold standard for LN clinical diagnosis is a renal biopsy. Still, the invasiveness of this technique is an obstacle to the early detection of renal involvement and further monitoring of treatment results. Consequently, there are different areas for improvement in the field of LN, such as the search for novel non-invasive clinical biomarkers with an adequate correlation between clinical manifestations and actual histological damage. Although urine component-related studies are promising, the more robust blood/serum biomarkers may still be helpful in developing point-of-care systems that can be adapted to most clinical scenarios. Therefore, this brief review aims to highlight and summarize some of the most recently reported non-classical serum/blood potential LN biomarkers. (Rev Invest Clin. 2022;74(5):227-31).</p>","PeriodicalId":49612,"journal":{"name":"Revista De Investigacion Clinica-Clinical and Translational Investigation","volume":"74 5","pages":"227-231"},"PeriodicalIF":1.4,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40464578","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Importance of Confirmatory Tests for Sars-Cov-2 Infection in Hemodialysis Patients: A Multicenter Mexican Registry. 对血液透析患者Sars-Cov-2感染的确认性检测的重要性:墨西哥多中心登记
IF 1.4 4区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.24875/RIC.23000002
Olynka Vega-Vega, Noemí Del Toro-Cisneros, Víctor M Sacoto-Romo, Juan M Ardavín-Ituarte, Alicia Piñeirúa-Menéndez, José C Peña-Rodríguez, Jesús M Ramos-Gordillo, Giovanna Y Arteaga-Müller, Héctor J Mayorga-Madrigal, Ricardo Mendiola-Fernández, Néstor H Cruz Mendoza, Mauricio Arvizu-Hernández, Ricardo Correa-Rotter

Background: Since the beginning of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic, patients with chronic kidney disease vulnerable to suffering more severe COVID-19 disease and worse outcomes have been identified.

Objectives: Our study's aim was to determine the incidence, characteristics, and outcomes of SARS-CoV-2 infection in patients of hemodialysis (HD) units in Mexico and to describe the availability of confirmatory testing.

Methods: This study was multicentric study of 19 HD units, conducted between March 2020 and March 2021.

Results: From a total of 5779 patients, 955 (16.5%) cases of suspicious COVID-19 were detected; a SARS-CoV-2 reverse transcription polymerase chain reaction test was done in only 50.6% of patients. Forty-five percentages were hospitalized and 6% required invasive mechanical ventilation (IMV). There was no significant difference in mortality between confirmed (131/483) and suspicious (124/472) cases (p = 0.74). The percentage of patients in need of hospitalization, IMV, and deceased was greater than in the rest of the study population.

Conclusions: The study revealed that 49.4% of the cases were not confirmed, a worrisome observation given that this is a highly vulnerable population (higher probability of contagion and worse outcomes), in which 100% of patients should have a confirmatory test.

背景:自严重急性呼吸综合征冠状病毒2 (SARS-CoV-2)大流行开始以来,已经发现慢性肾脏疾病患者易患更严重的COVID-19疾病和更差的结局。目的:本研究的目的是确定墨西哥血液透析(HD)患者中SARS-CoV-2感染的发生率、特征和结果,并描述确认性检测的可用性。方法:本研究是在2020年3月至2021年3月期间进行的19个HD单位的多中心研究。结果:5779例患者中检出可疑病例955例(16.5%);只有50.6%的患者进行了SARS-CoV-2逆转录聚合酶链反应试验。45%的患者住院,6%的患者需要有创机械通气(IMV)。确诊病例(131/483)与疑似病例(124/472)的死亡率差异无统计学意义(p = 0.74)。需要住院治疗、IMV和死亡的患者比例高于其他研究人群。结论:该研究显示,49.4%的病例未得到确诊,这是一个令人担忧的观察结果,因为这是一个高度脆弱的人群(传染的可能性更高,结果更差),其中100%的患者应该进行确诊检查。
{"title":"Importance of Confirmatory Tests for Sars-Cov-2 Infection in Hemodialysis Patients: A Multicenter Mexican Registry.","authors":"Olynka Vega-Vega,&nbsp;Noemí Del Toro-Cisneros,&nbsp;Víctor M Sacoto-Romo,&nbsp;Juan M Ardavín-Ituarte,&nbsp;Alicia Piñeirúa-Menéndez,&nbsp;José C Peña-Rodríguez,&nbsp;Jesús M Ramos-Gordillo,&nbsp;Giovanna Y Arteaga-Müller,&nbsp;Héctor J Mayorga-Madrigal,&nbsp;Ricardo Mendiola-Fernández,&nbsp;Néstor H Cruz Mendoza,&nbsp;Mauricio Arvizu-Hernández,&nbsp;Ricardo Correa-Rotter","doi":"10.24875/RIC.23000002","DOIUrl":"https://doi.org/10.24875/RIC.23000002","url":null,"abstract":"<p><strong>Background: </strong>Since the beginning of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic, patients with chronic kidney disease vulnerable to suffering more severe COVID-19 disease and worse outcomes have been identified.</p><p><strong>Objectives: </strong>Our study's aim was to determine the incidence, characteristics, and outcomes of SARS-CoV-2 infection in patients of hemodialysis (HD) units in Mexico and to describe the availability of confirmatory testing.</p><p><strong>Methods: </strong>This study was multicentric study of 19 HD units, conducted between March 2020 and March 2021.</p><p><strong>Results: </strong>From a total of 5779 patients, 955 (16.5%) cases of suspicious COVID-19 were detected; a SARS-CoV-2 reverse transcription polymerase chain reaction test was done in only 50.6% of patients. Forty-five percentages were hospitalized and 6% required invasive mechanical ventilation (IMV). There was no significant difference in mortality between confirmed (131/483) and suspicious (124/472) cases (p = 0.74). The percentage of patients in need of hospitalization, IMV, and deceased was greater than in the rest of the study population.</p><p><strong>Conclusions: </strong>The study revealed that 49.4% of the cases were not confirmed, a worrisome observation given that this is a highly vulnerable population (higher probability of contagion and worse outcomes), in which 100% of patients should have a confirmatory test.</p>","PeriodicalId":49612,"journal":{"name":"Revista De Investigacion Clinica-Clinical and Translational Investigation","volume":"75 2","pages":"47-52"},"PeriodicalIF":1.4,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9490067","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Circulating miRNA-1-3p as Biomarker of Accelerated Sarcopenia in Patients Diagnosed with Chronic Heart Failure. 循环miRNA-1-3p作为慢性心力衰竭患者加速肌肉减少的生物标志物
IF 1.4 4区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.24875/RIC.22000151
Rui Xu, Shuai Cui, Ling Chen, Xin-Chun Chen, Ling-Ling Ma, Hong-Ni Yang, Fang-Mei Wen

Background: While sarcopenia is an important clinical finding in individuals diagnosed with chronic heart failure (CHF), efforts to identify a reliable biomarker capable of predicting the overall muscular and functional decline in CHF patients have been unsuccessful to date.

Objectives: The objectives of this study were to study the diagnostic utility of MicroRNA (miRNA)-1-3p as a predictor of sarcopenia status in individuals diagnosed with CHF.

Methods: In total, 80 individuals with heart failure exhibiting a left ventricular ejection fraction < 50% were enrolled in this study. All patients were analyzed to assess miR-1-3p expression levels, with body composition being evaluated through dual-energy X-ray absorptiometry and sarcopenia being defined based on the sum of appendicular lean muscle mass (ALM) divided by height in meters squared and handgrip strength (HGS). In addition, the activation of the Akt/mTOR signaling pathway was evaluated in these individuals.

Results: In total, 40 of the enrolled patients (50%) exhibited sarcopenia. Sarcopenic patients presented with increased miR-1-3p expression levels as compared to non-sarcopenic individuals (1.69 ± 0.132 vs. 1.22 ± 0.106; p < 0.05). With respect to sarcopenic indices, appendicular skeletal mass index was most strongly correlated with miR-1-3p expression, which was also strongly correlated with HGS. High levels of Akt/mTOR signaling pathway components were expressed in sarcopenic individuals, highlighting a significant relationship between miR-1-3p activity and signaling through this pathway. Moreover, miR-1-3p was identified as a specific marker for sarcopenia in individuals with CHF.

Conclusions: These results suggest that circulating miR-1-3p levels are related to Akt/mTOR pathway activation and can offer valuable insight into the overall physical capacity and muscular integrity of CHF patients as a predictor of sarcopenia. (Rev Invest Clin. 2022;74(5):276-83).

背景:虽然肌肉减少症在慢性心力衰竭(CHF)患者中是一个重要的临床发现,但迄今为止,寻找能够预测CHF患者整体肌肉和功能下降的可靠生物标志物的努力尚未成功。目的:本研究的目的是研究MicroRNA (miRNA)-1-3p在诊断为CHF的个体中作为肌肉减少状态预测因子的诊断效用。方法:共有80例左心室射血分数< 50%的心力衰竭患者参加了这项研究。对所有患者进行分析以评估miR-1-3p的表达水平,通过双能x线吸收仪评估身体成分,并根据阑尾瘦肌肉质量(ALM)除以身高(米平方)和握力(HGS)的总和来定义肌肉减少症。此外,我们还评估了这些个体中Akt/mTOR信号通路的激活情况。结果:总共有40例(50%)患者出现肌肉减少症。与非肌少症患者相比,肌少症患者miR-1-3p表达水平升高(1.69±0.132∶1.22±0.106;P < 0.05)。在肌肉减少指数中,阑尾骨量指数与miR-1-3p表达的相关性最强,miR-1-3p表达与HGS的相关性也很强。高水平的Akt/mTOR信号通路成分在肌肉减少症个体中表达,这突出了miR-1-3p活性与通过该途径的信号传导之间的显著关系。此外,miR-1-3p被确定为CHF患者肌肉减少症的特异性标志物。结论:这些结果表明,循环miR-1-3p水平与Akt/mTOR通路激活有关,可以为CHF患者的整体体能和肌肉完整性提供有价值的信息,作为肌肉减少症的预测指标。[j] .中国科学:自然科学版,2012;33(5):391 - 391。
{"title":"Circulating miRNA-1-3p as Biomarker of Accelerated Sarcopenia in Patients Diagnosed with Chronic Heart Failure.","authors":"Rui Xu,&nbsp;Shuai Cui,&nbsp;Ling Chen,&nbsp;Xin-Chun Chen,&nbsp;Ling-Ling Ma,&nbsp;Hong-Ni Yang,&nbsp;Fang-Mei Wen","doi":"10.24875/RIC.22000151","DOIUrl":"https://doi.org/10.24875/RIC.22000151","url":null,"abstract":"<p><strong>Background: </strong>While sarcopenia is an important clinical finding in individuals diagnosed with chronic heart failure (CHF), efforts to identify a reliable biomarker capable of predicting the overall muscular and functional decline in CHF patients have been unsuccessful to date.</p><p><strong>Objectives: </strong>The objectives of this study were to study the diagnostic utility of MicroRNA (miRNA)-1-3p as a predictor of sarcopenia status in individuals diagnosed with CHF.</p><p><strong>Methods: </strong>In total, 80 individuals with heart failure exhibiting a left ventricular ejection fraction < 50% were enrolled in this study. All patients were analyzed to assess miR-1-3p expression levels, with body composition being evaluated through dual-energy X-ray absorptiometry and sarcopenia being defined based on the sum of appendicular lean muscle mass (ALM) divided by height in meters squared and handgrip strength (HGS). In addition, the activation of the Akt/mTOR signaling pathway was evaluated in these individuals.</p><p><strong>Results: </strong>In total, 40 of the enrolled patients (50%) exhibited sarcopenia. Sarcopenic patients presented with increased miR-1-3p expression levels as compared to non-sarcopenic individuals (1.69 ± 0.132 vs. 1.22 ± 0.106; p < 0.05). With respect to sarcopenic indices, appendicular skeletal mass index was most strongly correlated with miR-1-3p expression, which was also strongly correlated with HGS. High levels of Akt/mTOR signaling pathway components were expressed in sarcopenic individuals, highlighting a significant relationship between miR-1-3p activity and signaling through this pathway. Moreover, miR-1-3p was identified as a specific marker for sarcopenia in individuals with CHF.</p><p><strong>Conclusions: </strong>These results suggest that circulating miR-1-3p levels are related to Akt/mTOR pathway activation and can offer valuable insight into the overall physical capacity and muscular integrity of CHF patients as a predictor of sarcopenia. (Rev Invest Clin. 2022;74(5):276-83).</p>","PeriodicalId":49612,"journal":{"name":"Revista De Investigacion Clinica-Clinical and Translational Investigation","volume":"74 5","pages":"276-268"},"PeriodicalIF":1.4,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40664442","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Predictors of Poor Outcomes in Young Non-Comorbid Patients with COVID-19. 年轻无合并症COVID-19患者预后不良的预测因素
IF 1.4 4区 医学 Q2 Medicine Pub Date : 2022-01-01 DOI: 10.24875/RIC.22000162
Bernardo A Martínez-Guerra, Carla Medrano-Borromeo, María F González-Lara, Carla M Román-Montes, Karla M Tamez-Torres, Sandra Rajme-López, Karla D Salgado-Guízar, Noe A Juárez-Menéndez, Pilar Ramos-Cervantes, Guillermo M Ruiz-Palacios, Alfredo Ponce-de-León, José Sifuentes-Osornio

Background: Prognostic factors in previously healthy young patients with COVID-19 remained understudied.

Objectives: The objective of the study was to identify factors associated with in-hospital death or need for invasive mechanical ventilation (IMV) in young (aged ≤ 65 years) and previously healthy patients with COVID-19.

Methods: We conducted a prospective cohort study that included patients admitted with COVID-19. The primary outcome was in-hospital death/need for IMV. Secondary outcomes included need for IMV during follow-up, days on IMV, length of stay (LOS), hospital-acquired pneumonia/ventilator-associated pneumonia (HAP/VAP), and pulmonary embolism (PE). Bivariate and multivariate analyses were performed.

Results: Among 92 patients, primary outcome occurred in 16 (17%), death in 12 (13%), need for IMV in 16 (17%), HAP/VAP in 7 (8%), and PE in 2 (2%). Median LOS and IMV duration were 7 and 12 days, respectively. Independent associations were found between the primary outcome and male sex (Adjusted odds ratio [aOR] 7.1, 95%CI 1.1-46.0, p < 0.05), D-dimer levels > 1000ng/mL (aOR 9.0, 95%CI 1.6-49.1, p < 0.05), and RT-PCR Ct-value ≤ 24 on initial swab samples (aOR 14.3, 95%CI 2.0-101.5, p < 0.01).

Conclusions: In young and non-comorbid COVID-19 patients, male sex, higher levels of D-dimer, and low SARS-CoV-2 RT-PCR Ct-value on an initial nasopharyngeal swab were independently associated with increased in-hospital mortality or need for IMV. (Rev Invest Clin. 2022;74(5):268-75).

背景:先前健康的年轻COVID-19患者的预后因素仍未得到充分研究。目的:本研究的目的是确定年轻(年龄≤65岁)和既往健康的COVID-19患者院内死亡或需要有创机械通气(IMV)的相关因素。方法:我们进行了一项前瞻性队列研究,纳入了入院的COVID-19患者。主要结局是院内死亡/需要静脉注射。次要结局包括随访期间是否需要IMV治疗、IMV治疗天数、住院时间(LOS)、医院获得性肺炎/呼吸机相关性肺炎(HAP/VAP)和肺栓塞(PE)。进行了双变量和多变量分析。结果:在92例患者中,16例(17%)发生主要结局,12例(13%)死亡,16例(17%)需要IMV, 7例(8%)HAP/VAP, 2例(2%)PE。中位LOS和IMV持续时间分别为7天和12天。主要结局与男性性别(调整比值比[aOR] 7.1, 95%CI 1.1 ~ 46.0, p < 0.05)、d -二聚体水平> 1000ng/mL (aOR 9.0, 95%CI 1.6 ~ 49.1, p < 0.05)、初始棉球样本RT-PCR ct值≤24 (aOR 14.3, 95%CI 2.0 ~ 101.5, p < 0.01)存在独立相关性。结论:在年轻和无合病的COVID-19患者中,男性、较高的d -二聚体水平和初始鼻咽拭子中较低的SARS-CoV-2 RT-PCR ct值与住院死亡率或IMV需求的增加独立相关。[j] .中国科技大学学报(自然科学版),2012;
{"title":"Predictors of Poor Outcomes in Young Non-Comorbid Patients with COVID-19.","authors":"Bernardo A Martínez-Guerra,&nbsp;Carla Medrano-Borromeo,&nbsp;María F González-Lara,&nbsp;Carla M Román-Montes,&nbsp;Karla M Tamez-Torres,&nbsp;Sandra Rajme-López,&nbsp;Karla D Salgado-Guízar,&nbsp;Noe A Juárez-Menéndez,&nbsp;Pilar Ramos-Cervantes,&nbsp;Guillermo M Ruiz-Palacios,&nbsp;Alfredo Ponce-de-León,&nbsp;José Sifuentes-Osornio","doi":"10.24875/RIC.22000162","DOIUrl":"https://doi.org/10.24875/RIC.22000162","url":null,"abstract":"<p><strong>Background: </strong>Prognostic factors in previously healthy young patients with COVID-19 remained understudied.</p><p><strong>Objectives: </strong>The objective of the study was to identify factors associated with in-hospital death or need for invasive mechanical ventilation (IMV) in young (aged ≤ 65 years) and previously healthy patients with COVID-19.</p><p><strong>Methods: </strong>We conducted a prospective cohort study that included patients admitted with COVID-19. The primary outcome was in-hospital death/need for IMV. Secondary outcomes included need for IMV during follow-up, days on IMV, length of stay (LOS), hospital-acquired pneumonia/ventilator-associated pneumonia (HAP/VAP), and pulmonary embolism (PE). Bivariate and multivariate analyses were performed.</p><p><strong>Results: </strong>Among 92 patients, primary outcome occurred in 16 (17%), death in 12 (13%), need for IMV in 16 (17%), HAP/VAP in 7 (8%), and PE in 2 (2%). Median LOS and IMV duration were 7 and 12 days, respectively. Independent associations were found between the primary outcome and male sex (Adjusted odds ratio [aOR] 7.1, 95%CI 1.1-46.0, p < 0.05), D-dimer levels > 1000ng/mL (aOR 9.0, 95%CI 1.6-49.1, p < 0.05), and RT-PCR Ct-value ≤ 24 on initial swab samples (aOR 14.3, 95%CI 2.0-101.5, p < 0.01).</p><p><strong>Conclusions: </strong>In young and non-comorbid COVID-19 patients, male sex, higher levels of D-dimer, and low SARS-CoV-2 RT-PCR Ct-value on an initial nasopharyngeal swab were independently associated with increased in-hospital mortality or need for IMV. (Rev Invest Clin. 2022;74(5):268-75).</p>","PeriodicalId":49612,"journal":{"name":"Revista De Investigacion Clinica-Clinical and Translational Investigation","volume":"74 5","pages":"268-275"},"PeriodicalIF":1.4,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40663515","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Revista De Investigacion Clinica-Clinical and Translational Investigation
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