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Unveiling critical ADHD biomarkers in limbic system and cerebellum using a binary hypothesis testing approach. 利用二元假设检验方法揭示边缘系统和小脑中关键的多动症生物标志物。
IF 2.6 4区 工程技术 Q1 Mathematics Pub Date : 2024-04-28 DOI: 10.3934/mbe.2024256
Ying Chen, Lele Wang, Zhixin Li, Yibin Tang, Zhan Huan

Attention deficit hyperactivity disorder (ADHD) is a common childhood developmental disorder. In recent years, pattern recognition methods have been increasingly applied to neuroimaging studies of ADHD. However, these methods often suffer from limited accuracy and interpretability, impeding their contribution to the identification of ADHD-related biomarkers. To address these limitations, we applied the amplitude of low-frequency fluctuation (ALFF) results for the limbic system and cerebellar network as input data and conducted a binary hypothesis testing framework for ADHD biomarker detection. Our study on the ADHD-200 dataset at multiple sites resulted in an average classification accuracy of 93%, indicating strong discriminative power of the input brain regions between the ADHD and control groups. Moreover, our approach identified critical brain regions, including the thalamus, hippocampal gyrus, and cerebellum Crus 2, as biomarkers. Overall, this investigation uncovered potential ADHD biomarkers in the limbic system and cerebellar network through the use of ALFF realizing highly credible results, which can provide new insights for ADHD diagnosis and treatment.

注意缺陷多动障碍(ADHD)是一种常见的儿童发育障碍。近年来,越来越多的模式识别方法被应用于多动症的神经影像学研究。然而,这些方法往往存在准确性和可解释性有限的问题,阻碍了它们对多动症相关生物标志物的识别。为了解决这些局限性,我们将边缘系统和小脑网络的低频波动幅度(ALFF)结果作为输入数据,并采用二元假设检验框架进行多动症生物标记物的检测。我们对多部位 ADHD-200 数据集的研究结果表明,平均分类准确率为 93%,表明输入脑区在多动症组和对照组之间具有很强的区分能力。此外,我们的方法还确定了丘脑、海马回和小脑Crus 2等关键脑区为生物标记物。总之,这项研究通过使用 ALFF 发现了边缘系统和小脑网络中潜在的多动症生物标志物,实现了高度可信的结果,可为多动症的诊断和治疗提供新的见解。
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引用次数: 0
Bayesian inverse problem for a fractional diffusion model of cell migration. 细胞迁移分数扩散模型的贝叶斯逆问题。
IF 2.6 4区 工程技术 Q1 Mathematics Pub Date : 2024-04-28 DOI: 10.3934/mbe.2024257
Francisco Julian Ariza-Hernandez, Juan Carlos Najera-Tinoco, Martin Patricio Arciga-Alejandre, Eduardo Castañeda-Saucedo, Jorge Sanchez-Ortiz

In the present work, both direct and inverse problems are considered for a Fisher-type fractional diffusion equation, which is proposed to describe the phenomenon of cell migration. For the direct problem, a solution is given via the Fourier method and the Laplace transform. On the other hand, we solved the inverse problem from a Bayesian statistical framework using a set of data that are the result of a cell migration experiment on a wound closure assay. We estimated the parameters of the mathematical model via Markov Chain Monte Carlo methods.

本研究考虑了费雪型分数扩散方程的直接问题和逆问题,该方程被提出来描述细胞迁移现象。对于直接问题,我们通过傅立叶方法和拉普拉斯变换给出了解决方案。另一方面,我们从贝叶斯统计框架出发,利用一组在伤口闭合试验中进行细胞迁移实验的数据解决了逆问题。我们通过马尔可夫链蒙特卡洛方法估计了数学模型的参数。
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引用次数: 0
Research on a vehicle and pedestrian detection algorithm based on improved attention and feature fusion. 基于改进的注意力和特征融合的车辆和行人检测算法研究。
IF 2.6 4区 工程技术 Q1 Mathematics Pub Date : 2024-04-26 DOI: 10.3934/mbe.2024255
Wenjie Liang

With the widespread integration of deep learning in intelligent transportation and various industrial sectors, target detection technology is gradually becoming one of the key research areas. Accurately detecting road vehicles and pedestrians is of great significance for the development of autonomous driving technology. Road object detection faces problems such as complex backgrounds, significant scale changes, and occlusion. To accurately identify traffic targets in complex environments, this paper proposes a road target detection algorithm based on the enhanced YOLOv5s. This algorithm introduces the weighted enhanced polarization self attention (WEPSA) self-attention mechanism, which uses spatial attention and channel attention to strengthen the important features extracted by the feature extraction network and suppress insignificant background information. In the neck network, we designed a weighted feature fusion network (CBiFPN) to enhance neck feature representation and enrich semantic information. This strategic feature fusion not only boosts the algorithm's adaptability to intricate scenes, but also contributes to its robust performance. Then, the bounding box regression loss function uses EIoU to accelerate model convergence and reduce losses. Finally, a large number of experiments have shown that the improved YOLOv5s algorithm achieves mAP@0.5 scores of 92.8% and 53.5% on the open-source datasets KITTI and Cityscapes. On the self-built dataset, the mAP@0.5 reaches 88.7%, which is 1.7%, 3.8%, and 3.3% higher than YOLOv5s, respectively, ensuring real-time performance while improving detection accuracy. In addition, compared to the latest YOLOv7 and YOLOv8, the improved YOLOv5 shows good overall performance on the open-source datasets.

随着深度学习在智能交通和各工业领域的广泛应用,目标检测技术逐渐成为重点研究领域之一。准确检测道路车辆和行人对自动驾驶技术的发展具有重要意义。道路目标检测面临着背景复杂、尺度变化大和遮挡等问题。为了在复杂环境中准确识别交通目标,本文提出了一种基于增强型 YOLOv5s 的道路目标检测算法。该算法引入了加权增强极化自我注意(WEPSA)自我注意机制,利用空间注意和通道注意来强化特征提取网络提取的重要特征,抑制不重要的背景信息。在颈部网络中,我们设计了一个加权特征融合网络(CBiFPN)来增强颈部特征表示并丰富语义信息。这种策略性的特征融合不仅提高了算法对复杂场景的适应性,还有助于提高算法的鲁棒性能。然后,边界框回归损失函数使用 EIoU 加速模型收敛并减少损失。最后,大量实验表明,改进后的 YOLOv5s 算法在开源数据集 KITTI 和 Cityscapes 上的 mAP@0.5 得分为 92.8% 和 53.5%。在自建数据集上,mAP@0.5,达到 88.7%,分别比 YOLOv5s 高出 1.7%、3.8% 和 3.3%,在提高检测精度的同时保证了实时性。此外,与最新的 YOLOv7 和 YOLOv8 相比,改进后的 YOLOv5 在开源数据集上显示出良好的整体性能。
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引用次数: 0
The switching and learning behavior of an octopus cell implemented on FPGA. 在 FPGA 上实现章鱼细胞的开关和学习行为。
IF 2.6 4区 工程技术 Q1 Mathematics Pub Date : 2024-04-25 DOI: 10.3934/mbe.2024254
Alexej Tschumak, Frank Feldhoff, Frank Klefenz

A dendrocentric backpropagation spike timing-dependent plasticity learning rule has been derived based on temporal logic for a single octopus neuron. It receives parallel spike trains and collectively adjusts its synaptic weights in the range [0, 1] during training. After the training phase, it spikes in reaction to event signaling input patterns in sensory streams. The learning and switching behavior of the octopus cell has been implemented in field-programmable gate array (FPGA) hardware. The application in an FPGA is described and the proof of concept for its application in hardware that was obtained by feeding it with spike cochleagrams is given; also, it is verified by performing a comparison with the pre-computed standard software simulation results.

我们基于时间逻辑为单个章鱼神经元推导出了一种树枝状反向传播尖峰计时可塑性学习规则。在训练过程中,它接收平行的尖峰列车,并在 [0, 1] 范围内集体调整其突触权重。训练阶段结束后,神经元会对感觉流中的事件信号输入模式作出尖峰反应。章鱼细胞的学习和切换行为是通过现场可编程门阵列(FPGA)硬件实现的。文中介绍了在 FPGA 中的应用,并给出了通过向其输入尖峰耳蜗图而获得的在硬件中应用的概念验证;此外,还通过与预先计算的标准软件仿真结果进行比较进行了验证。
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引用次数: 0
Multi-phase features interaction transformer network for liver tumor segmentation and microvascular invasion assessment in contrast-enhanced CT. 用于对比增强 CT 中肝脏肿瘤分割和微血管侵犯评估的多相位特征交互变压器网络
IF 2.6 4区 工程技术 Q1 Mathematics Pub Date : 2024-04-24 DOI: 10.3934/mbe.2024253
Wencong Zhang, Yuxi Tao, Zhanyao Huang, Yue Li, Yingjia Chen, Tengfei Song, Xiangyuan Ma, Yaqin Zhang

Precise segmentation of liver tumors from computed tomography (CT) scans is a prerequisite step in various clinical applications. Multi-phase CT imaging enhances tumor characterization, thereby assisting radiologists in accurate identification. However, existing automatic liver tumor segmentation models did not fully exploit multi-phase information and lacked the capability to capture global information. In this study, we developed a pioneering multi-phase feature interaction Transformer network (MI-TransSeg) for accurate liver tumor segmentation and a subsequent microvascular invasion (MVI) assessment in contrast-enhanced CT images. In the proposed network, an efficient multi-phase features interaction module was introduced to enable bi-directional feature interaction among multiple phases, thus maximally exploiting the available multi-phase information. To enhance the model's capability to extract global information, a hierarchical transformer-based encoder and decoder architecture was designed. Importantly, we devised a multi-resolution scales feature aggregation strategy (MSFA) to optimize the parameters and performance of the proposed model. Subsequent to segmentation, the liver tumor masks generated by MI-TransSeg were applied to extract radiomic features for the clinical applications of the MVI assessment. With Institutional Review Board (IRB) approval, a clinical multi-phase contrast-enhanced CT abdominal dataset was collected that included 164 patients with liver tumors. The experimental results demonstrated that the proposed MI-TransSeg was superior to various state-of-the-art methods. Additionally, we found that the tumor mask predicted by our method showed promising potential in the assessment of microvascular invasion. In conclusion, MI-TransSeg presents an innovative paradigm for the segmentation of complex liver tumors, thus underscoring the significance of multi-phase CT data exploitation. The proposed MI-TransSeg network has the potential to assist radiologists in diagnosing liver tumors and assessing microvascular invasion.

从计算机断层扫描(CT)扫描中精确分割肝脏肿瘤是各种临床应用的前提步骤。多相 CT 成像可增强肿瘤特征描述,从而帮助放射科医生准确识别肿瘤。然而,现有的肝脏肿瘤自动分割模型并未充分利用多相信息,也缺乏捕捉全局信息的能力。在这项研究中,我们开发了一种开创性的多相位特征交互变换器网络(MI-TransSeg),用于在对比增强 CT 图像中准确地进行肝脏肿瘤分割和随后的微血管侵犯(MVI)评估。在所提出的网络中,引入了一个高效的多相位特征交互模块,以实现多相位之间的双向特征交互,从而最大限度地利用可用的多相位信息。为了增强模型提取全局信息的能力,我们设计了一种基于分层变压器的编码器和解码器架构。重要的是,我们设计了一种多分辨率尺度特征聚合策略(MSFA),以优化所提模型的参数和性能。分割后,MI-TransSeg 生成的肝脏肿瘤掩膜被用于提取放射学特征,以用于 MVI 评估的临床应用。经机构审查委员会(IRB)批准,收集了临床多相对比增强腹部 CT 数据集,其中包括 164 名肝脏肿瘤患者。实验结果表明,所提出的 MI-TransSeg 优于各种最先进的方法。此外,我们还发现,我们的方法所预测的肿瘤掩膜在评估微血管侵犯方面表现出了良好的潜力。总之,MI-TransSeg 为复杂肝脏肿瘤的分割提供了一个创新范例,从而强调了多相 CT 数据利用的重要性。建议的 MI-TransSeg 网络有可能帮助放射科医生诊断肝脏肿瘤和评估微血管侵犯。
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引用次数: 0
EMG gesture signal analysis towards diagnosis of upper limb using dual-pathway convolutional neural network. 利用双通路卷积神经网络对 EMG 手势信号进行分析,以诊断上肢疾病。
IF 2.6 4区 工程技术 Q1 Mathematics Pub Date : 2024-04-24 DOI: 10.3934/mbe.2024252
Hafiz Ghulam Murtza Qamar, Muhammad Farrukh Qureshi, Zohaib Mushtaq, Zubariah Zubariah, Muhammad Zia Ur Rehman, Nagwan Abdel Samee, Noha F Mahmoud, Yeong Hyeon Gu, Mohammed A Al-Masni

This research introduces a novel dual-pathway convolutional neural network (DP-CNN) architecture tailored for robust performance in Log-Mel spectrogram image analysis derived from raw multichannel electromyography signals. The primary objective is to assess the effectiveness of the proposed DP-CNN architecture across three datasets (NinaPro DB1, DB2, and DB3), encompassing both able-bodied and amputee subjects. Performance metrics, including accuracy, precision, recall, and F1-score, are employed for comprehensive evaluation. The DP-CNN demonstrates notable mean accuracies of 94.93 ± 1.71% and 94.00 ± 3.65% on NinaPro DB1 and DB2 for healthy subjects, respectively. Additionally, it achieves a robust mean classification accuracy of 85.36 ± 0.82% on amputee subjects in DB3, affirming its efficacy. Comparative analysis with previous methodologies on the same datasets reveals substantial improvements of 28.33%, 26.92%, and 39.09% over the baseline for DB1, DB2, and DB3, respectively. The DP-CNN's superior performance extends to comparisons with transfer learning models for image classification, reaffirming its efficacy. Across diverse datasets involving both able-bodied and amputee subjects, the DP-CNN exhibits enhanced capabilities, holding promise for advancing myoelectric control.

本研究介绍了一种新颖的双通路卷积神经网络(DP-CNN)架构,该架构专为在从原始多通道肌电信号导出的 Log-Mel 频谱图像分析中实现稳健性能而量身定制。主要目的是评估拟议的 DP-CNN 架构在三个数据集(NinaPro DB1、DB2 和 DB3)中的有效性,其中包括健全受试者和截肢受试者。综合评估采用了准确度、精确度、召回率和 F1 分数等性能指标。DP-CNN 对健康受试者的 NinaPro DB1 和 DB2 的平均准确率分别为 94.93 ± 1.71% 和 94.00 ± 3.65%。此外,在 DB3 中,它对截肢受试者的平均分类准确率达到了 85.36 ± 0.82%,证明了它的功效。在相同的数据集上与以前的方法进行比较分析后发现,DB1、DB2 和 DB3 比基线分别提高了 28.33%、26.92% 和 39.09%。DP-CNN 的卓越性能还延伸到与图像分类的迁移学习模型的比较中,再次证明了它的功效。在涉及健全受试者和截肢受试者的各种数据集上,DP-CNN 显示出更强的能力,为推进肌电控制带来了希望。
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引用次数: 0
Retraction notice to "Kinesin family member 15 can promote the proliferation of glioblastoma" [Mathematical Biosciences and Engineering 19(8) (2022) 8259-8272]. 驱动蛋白家族成员 15 能促进胶质母细胞瘤的增殖》的撤稿通知 [Mathematical Biosciences and Engineering 19(8) (2022) 8259-8272]。
IF 2.6 4区 工程技术 Q1 Mathematics Pub Date : 2024-04-22 DOI: 10.3934/mbe.2024250
Editorial Office Of Mathematical Biosciences And Engineering
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引用次数: 0
Stability and Hopf bifurcation of an intraguild prey-predator fishery model with two delays and Michaelis-Menten type predator harvest. 具有两个延迟和 Michaelis-Menten 型捕食者收获的野内猎物-捕食者渔业模型的稳定性和霍普夫分岔。
IF 2.6 4区 工程技术 Q1 Mathematics Pub Date : 2024-04-22 DOI: 10.3934/mbe.2024251
Min Hou, Tonghua Zhang, Sanling Yuan

In this paper, we have proposed and investigated an intraguild predator-prey system incorporating two delays and a harvesting mechanism based on the Michaelis-Menten principle, and it was assumed that the two species compete for a shared resource. Firstly, we examined the properties of the relevant characteristic equations to derive sufficient conditions for the asymptotical stability of equilibria in the delayed model and the existence of Hopf bifurcation. Using the normal form method and the central manifold theorem, we analyzed the stability and direction of periodic solutions arising from Hopf bifurcations. Our theoretical findings were subsequently validated through numerical simulations. Furthermore, we explored the impact of harvesting on the quantity of biological resources and examined the critical values associated with the two delays.

在本文中,我们提出并研究了一个包含两个延迟和基于迈克尔-门顿原理的收获机制的野内捕食者-猎物系统,并假设两个物种竞争一个共享资源。首先,我们研究了相关特征方程的性质,推导出延迟模型中均衡渐近稳定性和霍普夫分岔存在的充分条件。利用正态形式方法和中心流形定理,我们分析了霍普夫分岔产生的周期解的稳定性和方向。随后,我们通过数值模拟验证了我们的理论发现。此外,我们还探讨了收割对生物资源数量的影响,并研究了与两个延迟相关的临界值。
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引用次数: 0
Bifurcation analysis in a modified Leslie-Gower predator-prey model with fear effect and multiple delays. 具有恐惧效应和多重延迟的改良莱斯利-高尔捕食者-猎物模型的分岔分析
IF 2.6 4区 工程技术 Q1 Mathematics Pub Date : 2024-04-19 DOI: 10.3934/mbe.2024249
Shuo Yao, Jingen Yang, Sanling Yuan

In this paper, we explored a modified Leslie-Gower predator-prey model incorporating a fear effect and multiple delays. We analyzed the existence and local stability of each potential equilibrium. Furthermore, we investigated the presence of periodic solutions via Hopf bifurcation bifurcated from the positive equilibrium with respect to both delays. By utilizing the normal form theory and the center manifold theorem, we investigated the direction and stability of these periodic solutions. Our theoretical findings were validated through numerical simulations, which demonstrated that the fear delay could trigger a stability shift at the positive equilibrium. Additionally, we observed that an increase in fear intensity or the presence of substitute prey reinforces the stability of the positive equilibrium.

在本文中,我们探讨了一个包含恐惧效应和多重延迟的改良莱斯利-高尔捕食者-猎物模型。我们分析了每个潜在平衡的存在性和局部稳定性。此外,我们还研究了通过霍普夫分岔(Hopf bifurcation)从两个延迟的正平衡分岔出的周期解的存在性。通过利用正态形式理论和中心流形定理,我们研究了这些周期解的方向和稳定性。我们的理论发现通过数值模拟得到了验证,结果表明恐惧延迟会引发正平衡的稳定性转变。此外,我们还观察到,恐惧强度的增加或替代猎物的出现会加强正平衡的稳定性。
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引用次数: 0
Population mobility, well-mixed clustering and disease spread: a look at COVID-19 Spread in the United States and preventive policy insights. 人口流动、混合群聚与疾病传播:COVID-19 在美国的传播情况及预防政策启示。
IF 2.6 4区 工程技术 Q1 Mathematics Pub Date : 2024-04-16 DOI: 10.3934/mbe.2024247
David Lyver, Mihai Nica, Corentin Cot, Giacomo Cacciapaglia, Zahra Mohammadi, Edward W Thommes, Monica-Gabriela Cojocaru

The epidemiology of pandemics is classically viewed using geographical and political borders; however, these artificial divisions can result in a misunderstanding of the current epidemiological state within a given region. To improve upon current methods, we propose a clustering algorithm which is capable of recasting regions into well-mixed clusters such that they have a high level of interconnection while minimizing the external flow of the population towards other clusters. Moreover, we analyze and identify so-called core clusters, clusters that retain their features over time (temporally stable) and independent of the presence or absence of policy measures. In order to demonstrate the capabilities of this algorithm, we use USA county-level cellular mobility data to divide the country into such clusters. Herein, we show a more granular spread of SARS-CoV-2 throughout the first weeks of the pandemic. Moreover, we are able to identify areas (groups of counties) that were experiencing above average levels of transmission within a state, as well as pan-state areas (clusters overlapping more than one state) with very similar disease spread. Therefore, our method enables policymakers to make more informed decisions on the use of public health interventions within their jurisdiction, as well as guide collaboration with surrounding regions to benefit the general population in controlling the spread of communicable diseases.

人们通常使用地理和政治边界来看待流行病学;然而,这些人为的划分可能会导致对特定区域内当前流行病学状态的误解。为了改进现有的方法,我们提出了一种聚类算法,该算法能够将区域重塑为混合良好的聚类,使其具有高度的相互关联性,同时最大限度地减少人口向其他聚类的外部流动。此外,我们还分析并识别了所谓的核心集群,即随着时间的推移(时间上稳定)而保持其特征的集群,且不受政策措施存在与否的影响。为了展示该算法的能力,我们使用美国县级蜂窝移动数据将全国划分为此类集群。在此,我们展示了 SARS-CoV-2 在大流行最初几周内更细化的传播情况。此外,我们还能识别出州内传播水平高于平均水平的地区(县群),以及疾病传播非常相似的泛州地区(与多个州重叠的群集)。因此,我们的方法使政策制定者能够在其管辖范围内就公共卫生干预措施的使用做出更明智的决策,并指导与周边地区的合作,在控制传染病传播的过程中造福大众。
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引用次数: 0
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Mathematical Biosciences and Engineering
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