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Deep Convolution Generative Adversarial Network-Based Electroencephalogram Data Augmentation for Post-Stroke Rehabilitation with Motor Imagery. 基于深度卷积生成对抗网络的脑卒中后运动图像康复脑电数据增强。
IF 8 2区 计算机科学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2022-09-01 Epub Date: 2022-07-25 DOI: 10.1142/S0129065722500393
Fangzhou Xu, Gege Dong, Jincheng Li, Qingbo Yang, Lei Wang, Yanna Zhao, Yihao Yan, Jinzhao Zhao, Shaopeng Pang, Dongju Guo, Yang Zhang, Jiancai Leng

The motor imagery brain-computer interface (MI-BCI) system is currently one of the most advanced rehabilitation technologies, and it can be used to restore the motor function of stroke patients. The deep learning algorithms in the MI-BCI system require lots of training samples, but the electroencephalogram (EEG) data of stroke patients is quite scarce. Therefore, the expansion of EEG data has become an important part of stroke clinical rehabilitation research. In this paper, a deep convolution generative adversarial network (DCGAN) model is proposed to generate artificial EEG data and further expand the scale of the stroke dataset. First, multichannel one-dimensional EEG data is converted into a two-dimensional EEG spectrogram using EEG2Image based on the modified S-transform. Then, DCGAN is used to artificially generate EEG data based on MI. Finally, the validity of the generated artificial EEG data is proved. This paper preliminarily indicates that generating artificial stroke data is a promising strategy, which contributes to the further development of stroke clinical rehabilitation.

运动图像脑机接口(MI-BCI)系统是目前最先进的康复技术之一,可用于恢复脑卒中患者的运动功能。MI-BCI系统中的深度学习算法需要大量的训练样本,而脑卒中患者的脑电图(EEG)数据非常稀缺。因此,脑电数据的扩充已成为脑卒中临床康复研究的重要组成部分。本文提出了一种深度卷积生成对抗网络(deep convolution generative adversarial network, DCGAN)模型来生成人工脑电数据,并进一步扩大脑卒中数据集的规模。首先,利用基于改进s变换的EEG2Image将多通道一维脑电数据转换成二维脑电频谱图;在此基础上,利用DCGAN对人工脑电数据进行人工生成,最后对人工脑电数据的有效性进行了验证。本文初步指出,人工脑卒中数据生成是一种很有前途的策略,有助于脑卒中临床康复的进一步发展。
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引用次数: 8
Detection of Alzheimer's Dementia by Using Signal Decomposition and Machine Learning Methods. 基于信号分解和机器学习方法的阿尔茨海默氏痴呆症检测。
IF 8 2区 计算机科学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2022-09-01 Epub Date: 2022-08-09 DOI: 10.1142/S0129065722500423
Ozlem Karabiber Cura, Aydin Akan, Gulce Cosku Yilmaz, Hatice Sabiha Ture

Dementia is one of the most common neurological disorders causing defection of cognitive functions, and seriously affects the quality of life. In this study, various methods have been proposed for the detection and follow-up of Alzheimer's dementia (AD) with advanced signal processing methods by using electroencephalography (EEG) signals. Signal decomposition-based approaches such as empirical mode decomposition (EMD), ensemble EMD (EEMD), and discrete wavelet transform (DWT) are presented to classify EEG segments of control subjects (CSs) and AD patients. Intrinsic mode functions (IMFs) are obtained from the signals using the EMD and EEMD methods, and the IMFs showing the most significant differences between the two groups are selected by applying previously suggested selection procedures. Five-time-domain and 5-spectral-domain features are calculated using selected IMFs, and five detail and approximation coefficients of DWT. Signal decomposition processes are conducted for both 1 min and 5 s EEG segment durations. For the 1 min segment duration, all the proposed approaches yield prominent classification performances. While the highest classification accuracies are obtained using EMD (91.8%) and EEMD (94.1%) approaches from the temporal/right brain cluster, the highest classification accuracy for the DWT (95.2%) approach is obtained from the temporal/left brain cluster for 1 min segment duration.

痴呆症是最常见的神经系统疾病之一,可导致认知功能缺损,严重影响生活质量。本研究提出了多种利用脑电图(EEG)信号进行先进信号处理的方法来检测和随访阿尔茨海默氏痴呆(AD)的方法。提出了基于信号分解的经验模态分解(EMD)、集成模态分解(EEMD)和离散小波变换(DWT)等方法对对照组(CSs)和AD患者的脑电信号进行分类。使用EMD和EEMD方法从信号中获得固有模态函数(imf),并通过应用先前建议的选择程序选择两组之间显示最显著差异的imf。使用选定的imf和DWT的五个细节和近似系数计算五时域和五谱域特征。分别对1 min和5 s脑电段时间进行信号分解处理。对于1分钟的片段持续时间,所有的方法都有突出的分类性能。EMD(91.8%)和EEMD(94.1%)方法在颞/右脑聚类中获得了最高的分类准确率,而DWT方法在1分钟段持续时间内从颞/左脑聚类中获得了最高的分类准确率(95.2%)。
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引用次数: 5
Parallel Binary Image Cryptosystem Via Spiking Neural Networks Variants. 基于脉冲神经网络变体的并行二值图像密码系统。
IF 8 2区 计算机科学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2022-08-01 Epub Date: 2021-02-26 DOI: 10.1142/S0129065721500143
Mingzhe Liu, Feixiang Zhao, Xin Jiang, Hong Zhang, Helen Zhou

Due to the inefficiency of multiple binary images encryption, a parallel binary image encryption framework based on the typical variants of spiking neural networks, spiking neural P (SNP) systems is proposed in this paper. More specifically, the two basic units in the proposed image cryptosystem, the permutation unit and the diffusion unit, are designed through SNP systems with multiple channels and polarizations (SNP-MCP systems), and SNP systems with astrocyte-like control (SNP-ALC systems), respectively. Different from the serial computing of the traditional image permutation/diffusion unit, SNP-MCP-based permutation/SNP-ALC-based diffusion unit can realize parallel computing through the parallel use of rules inside the neurons. Theoretical analysis results confirm the high efficiency of the binary image proposed cryptosystem. Security analysis experiments demonstrate the security of the proposed cryptosystem.

针对多幅二值图像加密效率低的问题,提出了一种基于尖峰神经网络的典型变体——尖峰神经P (SNP)系统的并行二值图像加密框架。更具体地说,所提出的图像密码系统中的两个基本单元,排列单元和扩散单元,分别通过具有多通道和极化的SNP系统(SNP- mcp系统)和具有星形细胞样控制的SNP系统(SNP- alc系统)设计。与传统图像排列/扩散单元的串行计算不同,基于snp - mcp的排列/ snp - alc的扩散单元可以通过神经元内部规则的并行利用来实现并行计算。理论分析结果证实了所提出的二值图像密码系统的高效性。安全分析实验证明了所提出密码系统的安全性。
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引用次数: 5
A Neurorobotic Embodiment for Exploring the Dynamical Interactions of a Spiking Cerebellar Model and a Robot Arm During Vision-Based Manipulation Tasks. 在基于视觉的操作任务中探索尖峰小脑模型和机械臂的动态相互作用的神经机器人实施例。
IF 8 2区 计算机科学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2022-08-01 Epub Date: 2021-05-18 DOI: 10.1142/S0129065721500283
Omar Zahra, David Navarro-Alarcon, Silvia Tolu

While the original goal for developing robots is replacing humans in dangerous and tedious tasks, the final target shall be completely mimicking the human cognitive and motor behavior. Hence, building detailed computational models for the human brain is one of the reasonable ways to attain this. The cerebellum is one of the key players in our neural system to guarantee dexterous manipulation and coordinated movements as concluded from lesions in that region. Studies suggest that it acts as a forward model providing anticipatory corrections for the sensory signals based on observed discrepancies from the reference values. While most studies consider providing the teaching signal as error in joint-space, few studies consider the error in task-space and even fewer consider the spiking nature of the cerebellum on the cellular-level. In this study, a detailed cellular-level forward cerebellar model is developed, including modeling of Golgi and Basket cells which are usually neglected in previous studies. To preserve the biological features of the cerebellum in the developed model, a hyperparameter optimization method tunes the network accordingly. The efficiency and biological plausibility of the proposed cerebellar-based controller is then demonstrated under different robotic manipulation tasks reproducing motor behavior observed in human reaching experiments.

虽然开发机器人的最初目标是取代人类从事危险和繁琐的任务,但最终目标应该是完全模仿人类的认知和运动行为。因此,为人类大脑建立详细的计算模型是实现这一目标的合理途径之一。小脑是我们神经系统中保证灵巧操作和协调运动的关键角色之一,从该区域的病变中得出结论。研究表明,它作为一种正演模型,根据观察到的与参考值的差异,为感官信号提供预期的修正。虽然大多数研究认为提供教学信号是关节空间的误差,但很少有研究考虑任务空间的误差,更少的研究考虑小脑在细胞水平上的尖峰特性。在这项研究中,建立了一个详细的细胞水平的小脑正向模型,包括高尔基细胞和篮细胞的建模,这在以往的研究中通常被忽视。为了在开发的模型中保留小脑的生物学特征,一种超参数优化方法相应地调整了网络。然后,在不同的机器人操作任务中,再现了在人类伸手实验中观察到的运动行为,证明了所提出的基于小脑的控制器的效率和生物学合理性。
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引用次数: 10
Announcement: The 2022 Hojjat Adeli Award for Outstanding Contributions in Neural Systems. 公告:2022年霍贾特·阿德利神经系统杰出贡献奖。
IF 8 2区 计算机科学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2022-07-16 DOI: 10.1142/s0129065714820012
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引用次数: 0
Automated Interictal Epileptiform Discharge Detection From Scalp EEG Using Scalable Time-series Classification Approaches 基于可扩展时间序列分类方法的头皮脑电图间期癫痫样放电自动检测
IF 8 2区 计算机科学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2022-07-10 DOI: 10.1101/2022.07.06.22277287
D. Nhu, M. Janmohamed, L. Shakhatreh, O. Gonen, P. Perucca, A. Gilligan, P. Kwan, T. O'Brien, C. Tan, L. Kuhlmann
Deep learning for automated interictal epileptiform discharge (IED) detection has been topical with many published papers in recent years. All existing work viewed EEG signals as time-series and developed specific models for IED classification; however, general time-series classification (TSC) methods were not considered. Moreover, none of these methods were evaluated on any public datasets, making direct comparisons challenging. This paper explored two state-of-the-art convolutional-based TSC algorithms, InceptionTime and Minirocket, on IED detection. We fine-tuned and cross-evaluated them on two private and public (Temple University Events - TUEV) datasets and provided ready metrics for benchmarking future work. We observed that the optimal parameters correlated with the clinical duration of an IED and achieved the best AUC, AUPRC and F1 scores of 0.98, 0.80 and 0.77 on the private datasets, respectively. The AUC, AUPRC and F1 on TUEV were 0.99, 0.99 and 0.97, respectively. While algorithms trained on the private sets maintained the performance when tested on the TUEV data, those trained on TUEV could not generalise well to the private data. These results emerge from differences in the class distributions across datasets and indicate a need for public datasets with a better diversity of IED waveforms, background activities and artifacts to facilitate standardisation and benchmarking of algorithms.
近年来,深度学习用于癫痫样放电(IED)自动检测一直是许多已发表论文的热门话题。所有现有的工作都将EEG信号视为时间序列,并开发了IED分类的特定模型;然而,没有考虑一般的时间序列分类(TSC)方法。此外,这些方法都没有在任何公共数据集上进行评估,这使得直接比较具有挑战性。本文探讨了两种最先进的基于卷积的TSC算法,InceptionTime和Minirocket,用于IED检测。我们在两个私人和公共(坦普尔大学活动-TUEV)数据集上对它们进行了微调和交叉评估,并为未来的工作基准提供了现成的指标。我们观察到,最佳参数与IED的临床持续时间相关,并在私人数据集上获得了最佳AUC、AUPRC和F1得分,分别为0.98、0.80和0.77。TUEV的AUC、AUPRC和F1分别为0.99、0.99和0.97。虽然在私有集上训练的算法在TUEV数据上测试时保持了性能,但在TUEV上训练的那些算法不能很好地推广到私有数据。这些结果源于数据集之间类别分布的差异,表明需要具有更好多样性的IED波形、背景活动和工件的公共数据集,以促进算法的标准化和基准测试。
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引用次数: 2
Epileptic Seizure Prediction Using Deep Neural Networks Via Transfer Learning and Multi-Feature Fusion 基于迁移学习和多特征融合的深度神经网络癫痫发作预测
IF 8 2区 计算机科学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2022-06-11 DOI: 10.1142/S0129065722500320
Zuyi Yu, L. Albera, R. Bouquin-Jeannès, A. Kachenoura, A. Karfoul, Chunfeng Yang, H. Shu
Epilepsy is one of the most common neurological diseases, which can seriously affect the patient's psychological well-being and quality of life. An accurate and reliable seizure prediction system can generate alarm before epileptic seizures to provide patients and their caregivers with sufficient time to take appropriate action. This study proposes an efficient seizure prediction system based on deep learning in order to anticipate the onset of the seizure as early as possible. Handcrafted features extracted based on the prior knowledge and hidden deep features are complementarily fused through the feature fusion module, and then the hybrid features are fed into the multiplicative long short-term memory (MLSTM) to explore the temporal dependency in EEG signals. A one-dimensional channel attention mechanism is implemented to emphasize the more representative information in the multi-channel output of the MLSTM. Finally, a transfer learning strategy is proposed to transfer the weights of the base model trained on the EEG data of all patients to the target patient model, and the latter is then continuously trained using the EEG data of the target patient. The proposed method achieves an average sensitivity of 95.56% and a false positive rate (FPR) of 0.27/h on the SWEC-ETHZ intracranial EEG data. For the more challenging CHB-MIT scalp EEG database, an average sensitivity of 89.47% and a FPR of 0.34/h are obtained. Experimental results demonstrate that the proposed method has good robustness and generalization ability in both intracranial and scalp EEG signals.
癫痫是最常见的神经系统疾病之一,严重影响患者的心理健康和生活质量。准确可靠的癫痫发作预测系统可以在癫痫发作前发出警报,为患者及其护理人员提供足够的时间采取适当的行动。这项研究提出了一种基于深度学习的有效癫痫发作预测系统,以便尽早预测癫痫发作。基于先验知识提取的手工特征和隐藏的深层特征通过特征融合模块进行互补融合,然后将混合特征输入到乘法长短期记忆(MLSTM)中,以探索EEG信号中的时间依赖性。实现了一维通道注意力机制,以强调MLSTM的多通道输出中更具代表性的信息。最后,提出了一种转移学习策略,将根据所有患者的脑电图数据训练的基础模型的权重转移到目标患者模型,然后使用目标患者的脑电图信息连续训练目标患者模型。该方法对SWEC-ETHZ颅内脑电图数据的平均灵敏度为95.56%,假阳性率为0.27/h。对于更具挑战性的CHB-MIT头皮EEG数据库,获得了89.47%的平均灵敏度和0.34/h的FPR。实验结果表明,该方法对颅内和头皮脑电信号都具有良好的鲁棒性和泛化能力。
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引用次数: 4
Patient-Independent Seizure Detection Based on Channel-Perturbation Convolutional Neural Network and Bidirectional Long Short-Term Memory. 基于通道摄动卷积神经网络和双向长短期记忆的患者独立癫痫检测。
IF 6.6 2区 计算机科学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2022-06-01 Epub Date: 2021-11-15 DOI: 10.1142/S0129065721500519
Guoyang Liu, Lan Tian, Weidong Zhou

Automatic seizure detection is of great significance for epilepsy diagnosis and alleviating the massive burden caused by manual inspection of long-term EEG. At present, most seizure detection methods are highly patient-dependent and have poor generalization performance. In this study, a novel patient-independent approach is proposed to effectively detect seizure onsets. First, the multi-channel EEG recordings are preprocessed by wavelet decomposition. Then, the Convolutional Neural Network (CNN) with proper depth works as an EEG feature extractor. Next, the obtained features are fed into a Bidirectional Long Short-Term Memory (BiLSTM) network to further capture the temporal variation characteristics. Finally, aiming to reduce the false detection rate (FDR) and improve the sensitivity, the postprocessing, including smoothing and collar, is performed on the outputs of the model. During the training stage, a novel channel perturbation technique is introduced to enhance the model generalization ability. The proposed approach is comprehensively evaluated on the CHB-MIT public scalp EEG database as well as a more challenging SH-SDU scalp EEG database we collected. Segment-based average accuracies of 97.51% and 93.70%, event-based average sensitivities of 86.51% and 89.89%, and average AUC-ROC of 90.82% and 90.75% are yielded on the CHB-MIT database and SH-SDU database, respectively.

癫痫发作自动检测对于癫痫的诊断和减轻人工长期脑电图检查带来的巨大负担具有重要意义。目前,大多数癫痫检测方法都是高度依赖患者的,泛化性能较差。在这项研究中,提出了一种新的独立于患者的方法来有效地检测癫痫发作。首先,对多通道脑电信号进行小波分解预处理。然后,适当深度的卷积神经网络(CNN)作为EEG特征提取器。然后,将得到的特征输入到双向长短期记忆(BiLSTM)网络中,进一步捕捉时间变化特征。最后,为了降低误检率(FDR)和提高灵敏度,对模型输出进行平滑和领圈等后处理。在训练阶段,引入了一种新的通道摄动技术来提高模型的泛化能力。该方法在CHB-MIT公共头皮EEG数据库以及我们收集的更具挑战性的SH-SDU头皮EEG数据库上进行了综合评估。在CHB-MIT和SH-SDU数据库上,基于片段的平均准确率分别为97.51%和93.70%,基于事件的平均灵敏度分别为86.51%和89.89%,平均AUC-ROC分别为90.82%和90.75%。
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引用次数: 0
Characterizing Fractal Genetic Variation in the Human Genome from the Hapmap Project 人类基因组分形遗传变异的特征
IF 8 2区 计算机科学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2022-05-12 DOI: 10.1142/S0129065722500289
A. Borri, A. Cerasa, P. Tonin, L. Citrigno, C. Porcaro
Over the last decades, the exuberant development of next-generation sequencing has revolutionized gene discovery. These technologies have boosted the mapping of single nucleotide polymorphisms (SNPs) across the human genome, providing a complex universe of heterogeneity characterizing individuals worldwide. Fractal dimension (FD) measures the degree of geometric irregularity, quantifying how "complex" a self-similar natural phenomenon is. We compared two FD algorithms, box-counting dimension (BCD) and Higuchi's fractal dimension (HFD), to characterize genome-wide patterns of SNPs extracted from the HapMap data set, which includes data from 1184 healthy subjects of eleven populations. In addition, we have used cluster and classification analysis to relate the genetic distances within chromosomes based on FD similarities to the geographical distances among the 11 global populations. We found that HFD outperformed BCD at both grand average clusterization analysis by the cophenetic correlation coefficient, in which the closest value to 1 represents the most accurate clustering solution (0.981 for the HFD and 0.956 for the BCD) and classification (79.0% accuracy, 61.7% sensitivity, and 96.4% specificity for the HFD with respect to 69.1% accuracy, 43.2% sensitivity, and 94.9% specificity for the BCD) of the 11 populations present in the HapMap data set. These results support the evidence that HFD is a reliable measure helpful in representing individual variations within all chromosomes and categorizing individuals and global populations.
在过去的几十年里,下一代测序的蓬勃发展彻底改变了基因发现。这些技术促进了单核苷酸多态性(SNPs)在人类基因组中的定位,为世界各地的个体提供了一个复杂的异质性世界。分形维数(FD)测量几何不规则程度,量化自相似自然现象的“复杂程度”。我们比较了两种FD算法,盒计数维数(BCD)和Higuchi分形维数(HFD),以表征从HapMap数据集中提取的SNPs的全基因组模式,该数据集包括来自11个群体的1184名健康受试者的数据。此外,我们还使用聚类和分类分析,将基于FD相似性的染色体内遗传距离与11个全球种群之间的地理距离联系起来。我们发现,HFD在两次大平均聚类分析中均优于BCD,其中最接近1的值表示HapMap数据集中存在的11个群体的最准确的聚类解决方案(HFD为0.981,BCD为0.956)和分类(HFD的79.0%准确度、61.7%灵敏度和96.4%特异度相对于BCD的69.1%准确度、43.2%灵敏度和94.9%特异度)。这些结果支持了HFD是一种可靠的测量方法的证据,有助于表示所有染色体内的个体变异,并对个体和全球种群进行分类。
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引用次数: 3
A Hybrid Time-Distributed Deep Neural Architecture for Speech Emotion Recognition 一种用于语音情感识别的混合时间分布深度神经结构
IF 8 2区 计算机科学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2022-05-12 DOI: 10.1142/S0129065722500241
J. Lope, M. Graña
In recent years, speech emotion recognition (SER) has emerged as one of the most active human-machine interaction research areas. Innovative electronic devices, services and applications are increasingly aiming to check the user emotional state either to issue alerts under some predefined conditions or to adapt the system responses to the user emotions. Voice expression is a very rich and noninvasive source of information for emotion assessment. This paper presents a novel SER approach based on that is a hybrid of a time-distributed convolutional neural network (TD-CNN) and a long short-term memory (LSTM) network. Mel-frequency log-power spectrograms (MFLPSs) extracted from audio recordings are parsed by a sliding window that selects the input for the TD-CNN. The TD-CNN transforms the input image data into a sequence of high-level features that are feed to the LSTM, which carries out the overall signal interpretation. In order to reduce overfitting, the MFLPS representation allows innovative image data augmentation techniques that have no immediate equivalent on the original audio signal. Validation of the proposed hybrid architecture achieves an average recognition accuracy of 73.98% on the most widely and hardest publicly distributed database for SER benchmarking. A permutation test confirms that this result is significantly different from random classification ([Formula: see text]). The proposed architecture outperforms state-of-the-art deep learning models as well as conventional machine learning techniques evaluated on the same database trying to identify the same number of emotions.
近年来,语音情感识别(SER)已成为最活跃的人机交互研究领域之一。创新的电子设备、服务和应用程序正越来越多地致力于检查用户情绪状态,以便在一些预定义的条件下发出警报,或者使系统响应适应用户情绪。语音表达是情感评估的一个非常丰富和无创的信息来源。本文提出了一种新的SER方法,该方法是时间分布卷积神经网络(TD-CNN)和长短期记忆(LSTM)网络的混合。从音频记录中提取的梅尔频率对数功率谱图(MFLPS)通过选择TD-CNN的输入的滑动窗口来解析。TD-CNN将输入图像数据转换为一系列高级特征,这些特征被馈送到LSTM,LSTM执行整体信号解释。为了减少过拟合,MFLPS表示允许在原始音频信号上没有直接等效物的创新图像数据增强技术。对所提出的混合架构的验证在SER基准测试中最广泛、最难公开分布的数据库上实现了73.98%的平均识别准确率。排列测试证实,这一结果与随机分类显著不同([公式:见正文])。所提出的架构优于在同一数据库上评估的最先进的深度学习模型以及传统的机器学习技术,试图识别相同数量的情绪。
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引用次数: 2
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International Journal of Neural Systems
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