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Post-Exposure Effects of Vaccines on Infectious Diseases. 疫苗对传染病的暴露后影响。
IF 5.5 2区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2019-01-31 DOI: 10.1101/19001396
Tara Gallagher, M. Lipsitch
Many available vaccines have demonstrated post-exposure effectiveness, but no published systematic reviews have synthesized these findings. We searched the PubMed database for clinical trials and observational human studies concerning the post-exposure vaccination effects, targeting infections with Food and Drug Administration licensed vaccine plus dengue, hepatitis E, malaria, and tick borne encephalitis, which have licensed vaccines outside of the U.S. Studies concerning animal models, serologic testing, and pipeline vaccines were excluded. Eligible studies were evaluated by definition of exposure, and their attempt at distinguishing pre- and post-exposure effects was rated on a scale of 1-4. We screened 4518 articles and ultimately identified 14 clinical trials and 31 observational studies for this review, amounting to 45 eligible articles spanning 7 of the 28 vaccine-preventable diseases. For secondary attack rate, this body of evidence found the following medians for post-exposure vaccination effectiveness: hepatitis A: 85% (IQR: 28; 5 sources), hepatitis B: 85% (IQR: 22; 5 sources), measles: 83% (IQR: 21; 8 sources), varicella: 67% (IQR: 48; 9 sources), smallpox: 45% (IQR: 39; 4 sources), and mumps: 38% (IQR: 7; 2 sources). For case fatality proportions resulting from rabies and smallpox, the vaccine efficacies had medians of 100% (IQR: 0; 6 sources) and 63% (IQR: 50; 8 sources) postexposure. Although mainly used for preventive measures, many available vaccines can modify or preclude disease if administered after exposure. This post-exposure effectiveness could be important to consider during vaccine trials and while developing new vaccines.
许多可用的疫苗已经证明了暴露后的有效性,但没有发表的系统综述综合了这些发现。我们在PubMed数据库中搜索了有关暴露后疫苗接种效果的临床试验和观察性人体研究,针对的是美国食品药品监督管理局许可的疫苗加上登革热、戊型肝炎、疟疾和蜱传脑炎的感染,这些疫苗已在美国以外获得许可,管道疫苗被排除在外。符合条件的研究根据暴露的定义进行评估,并对其区分暴露前和暴露后影响的尝试进行1-4的评分。我们筛选了4518篇文章,最终确定了14项临床试验和31项观察性研究,共计45篇符合条件的文章,涵盖28种疫苗可预防疾病中的7种。关于二次发病率,该证据发现暴露后疫苗接种有效性的中位数如下:甲型肝炎:85%(IQR:28;5个来源),乙型肝炎:85%。对于狂犬病和天花引起的病死率,疫苗的有效性在暴露后分别为100%(IQR:0;6个来源)和63%(IQR:50;8个来源)。尽管主要用于预防措施,但如果在暴露后接种,许多可用的疫苗可以改变或预防疾病。这种暴露后的有效性在疫苗试验和开发新疫苗时可能很重要。
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引用次数: 21
A Review of Coccidioidomycosis in California: Exploring the Intersection of Land-use, Population Movement, and Climate Change. 加州球虫病综述:探索土地利用、人口流动和气候变化的交叉点。
IF 5.5 2区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2019-01-31 DOI: 10.1093/epirev/mxz004
Dharshani L. Pearson, Keita Ebisu, X. Wu, R. Basu
California has seen a surge in coccidioidomycosis (Valley fever), a disease spread by the Coccidioides Immitis fungus found in soil throughout the state, particularly in the San Joaquin Valley. In this paper, we reviewed epidemiologic studies examining outbreak and sporadic cases of coccidioidomycosis and considered their possible relationship to environmental conditions, particularly the state's growing aridity, drought and wildfire conditions. Most of the studies we reviewed pertained to cases occupationally-acquired in construction, military, archeological and correctional institutional settings where workers faced exposure to dust in Coccidioides Immitis-endemic areas. A few reviewed outbreaks in the general population related to dust exposure from natural disasters, including an earthquake-associated landslide and a dust storm that carried particles long distances from endemic areas. Although many of California's coccidioidomycosis outbreaks have been occupationally-related, changing demographics and new, immunologically-naive populations in dry, endemic areas could expose the general population to Coccidioides Immitis spores. Given the high rate of infection among largely healthy workers, the general population, comprised of some elderly and immunocompromised individuals, could face additional risk. With climate-related events like drought and wildfires also increasing in endemic areas, future research is needed to address the possible associations between these phenomena and coccidioidomycosis outbreaks.
加利福尼亚州的球虫病(山谷热)激增,这是一种由在全州土壤中发现的球虫免疫性真菌传播的疾病,尤其是在圣华金谷。在这篇论文中,我们回顾了对球虫病爆发和散发病例的流行病学研究,并考虑了它们与环境条件的可能关系,特别是该州日益干旱、干旱和野火的条件。我们回顾的大多数研究都与建筑、军事、考古和惩教机构环境中的职业性病例有关,在球虫免疫流行区,工人面临灰尘暴露。一些人回顾了与自然灾害粉尘暴露有关的普通人群中的疫情,包括与地震相关的山体滑坡和携带颗粒物远离流行地区的沙尘暴。尽管加利福尼亚州的许多球虫病疫情与职业有关,但在干旱、流行地区,不断变化的人口结构和新的免疫幼稚人群可能会使普通人群接触到球虫免疫孢子。鉴于大部分健康工人的感染率很高,由一些老年人和免疫功能低下的人组成的普通人群可能面临额外的风险。随着干旱和野火等气候相关事件在流行地区也在增加,未来的研究需要解决这些现象与球虫病爆发之间的可能联系。
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引用次数: 24
Evaluation of the epidemiological efficacy of eradicating Helicobacter pylori on development of gastric cancer. 根除幽门螺杆菌对胃癌发生的流行病学疗效评价。
IF 5.5 2区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2019-01-31 DOI: 10.1093/epirev/mxz006
Fujiao Duan, Chunhua Song, Jintao Zhang, Peng Wang, H. Ye, L. Dai, Jianying Zhang, Kaijuan Wang
Eradication of Helicobacter pylori (H. pylori) colonization has been reported to affect the progression of gastric cancer. A comprehensive literature search was performed from 1997 to 2017 through the electronic database. All randomized controlled trials (RCT) and non-randomized controlled trials (non-RCT) evaluated the effect of H. pylori eradication on development of gastric cancer. Four RCTs and nine non-RCTs were included, with a total of 40,740 participants (321,269 person-years). Overall, H. pylori eradication therapy was associated with a significantly reduced the risk of gastric cancer (Incidence rate ratio, IRR = 0.52, 95% CI: 0.41, 0.65). Results of mixed-effect Poisson regression meta-analysis were similar with traditional meta-analyses. In stratified analyses, the IRRs were 0.59 (95% CI: 0.41, 0.86) in RCTs and 0.48 (95% CI: 0.36, 0.64) in non-RCTs. The IRRs were 0.45 (95% CI: 0.34, 0.61) in patients and 0.63 (95% CI: 0.44, 0.90) in population. Moreover, the relative risk reduction was approximately 77% on the development of non-cardiac gastric cancer for H. pylori eradication therapy in China. Attributable risk percentage and population attributable risk percentage for Chinese patients were 77.08% and 75.33% and Japanese patients were 57.80% and 45.99%. In conclusion, H. pylori eradication therapy reduces the risk of developing non-cardiac gastric cancer, the findings indicate the importance of early intervention of H. pylori eradication therapy from the perspective of epidemiology.
据报道,根除幽门螺杆菌(h.p ylori)定植会影响胃癌的进展。通过电子数据库对1997 - 2017年的文献进行全面检索。所有随机对照试验(RCT)和非随机对照试验(non-RCT)都评估了根除幽门螺杆菌对胃癌发展的影响。纳入4项随机对照试验和9项非随机对照试验,共40740名受试者(321269人-年)。总的来说,根除幽门螺杆菌治疗与显著降低胃癌风险相关(发病率比,IRR = 0.52, 95% CI: 0.41, 0.65)。混合效应泊松回归meta分析结果与传统meta分析结果相似。在分层分析中,随机对照试验的irr为0.59 (95% CI: 0.41, 0.86),非随机对照试验的irr为0.48 (95% CI: 0.36, 0.64)。患者的irs为0.45 (95% CI: 0.34, 0.61),人群的irs为0.63 (95% CI: 0.44, 0.90)。此外,在中国,幽门螺杆菌根除治疗可使非心源性胃癌的相对风险降低约77%。中国患者归因风险率和人群归因风险率分别为77.08%和75.33%,日本患者为57.80%和45.99%。综上所述,幽门螺杆菌根除治疗降低了发生非心源性胃癌的风险,从流行病学角度提示早期干预幽门螺杆菌根除治疗的重要性。
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引用次数: 7
Advances in Data Driven Responses to Preventing Spread of Antibiotic Resistance across Healthcare Settings. 预防抗生素耐药性在医疗保健环境中传播的数据驱动反应进展。
IF 5.5 2区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2019-01-31 DOI: 10.1093/epirev/mxz010
S. Fridkin
Among the most urgent and serious antibiotic resistant threats to public health, seven are bacteria predominately acquired during health care delivery. There is an emerging field of healthcare epidemiology focused on preventing healthcare-associated infections with antibiotic resistant bacteria incorporating data from patient transfers or patient movements both within and between facilities; this analytic field is being used to help public health professionals identify best opportunities for prevention. Different analytic approaches drawing on uses of big data is being explored to help target the use of limited public health resources, leverage expertise, and enact effective policy to maximize an impact on a population-level health. This paper will summarize recent advances in data driven responses to preventing spread of antibiotic resistance across healthcare settings: leveraging big data for machine learning, integration or advances in tracking patient movement, and highlighting the value of coordinating response across institutions within a region.
在对公共健康最紧迫和最严重的抗生素耐药性威胁中,有七种是主要在医疗保健过程中获得的细菌。医疗流行病学的一个新兴领域专注于预防与医疗保健相关的抗生素耐药性细菌感染,该领域结合了患者在设施内和设施之间转移或患者流动的数据;这一分析领域正被用来帮助公共卫生专业人员确定预防的最佳机会。正在探索利用大数据的不同分析方法,以帮助确定有限公共卫生资源的使用目标,利用专业知识,并制定有效的政策,最大限度地提高对人口健康的影响。本文将总结数据驱动的应对措施的最新进展,以防止抗生素耐药性在医疗环境中的传播:利用大数据进行机器学习、整合或跟踪患者运动的进展,并强调协调一个地区内各机构应对措施的价值。
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引用次数: 2
The Many Faces of Emerging and Re-emerging Infectious Disease. 新出现和重新出现的传染病的多方面。
IF 5.5 2区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2019-01-31 DOI: 10.1093/epirev/mxz011
J. Lessler, W. Orenstein
The emergence of disease threats can take many forms, from the adaptation of a traditionally zoonotic pathogen for efficient spread in humans, to the development of antibiotic resistance in well-known pathogens, to the creation of new niches for established disease through social and societal changes. In this commentary, the authors explore these various facets of disease emergence through the lens of the papers included in this issue of Epidemiologic Reviews. The authors explore multiple aspects of emergence, and the ways in which emergent pathogens can be controlled with the limited tools available. In doing so they put the papers in this issue in the context of the broader research agenda around understanding and combatting emergent pathogens.
疾病威胁的出现可以采取多种形式,从传统的人畜共患病原体适应在人类中有效传播,到众所周知的病原体产生抗生素耐药性,以及通过社会和社会变化为现有疾病创造新的生态位。在这篇评论中,作者通过本期《流行病学评论》中收录的论文,探讨了疾病出现的这些不同方面。作者探索了涌现的多个方面,以及利用有限的可用工具控制涌现病原体的方法。在这样做的过程中,他们把发表在这个问题上的论文放在了更广泛的研究议程的背景下,围绕着理解和对抗突发病原体。
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引用次数: 5
Zoonotic Tuberculosis in Humans: Control, Surveillance, and the One Health Approach. 人类人畜共患结核病:控制、监测和同一个健康方法。
IF 5.5 2区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2019-01-31 DOI: 10.1093/epirev/mxz002
Rodrigo Macedo Couto, Otavio T Ranzani, Eliseu Alves Waldman

Zoonotic tuberculosis is a reemerging infectious disease in high-income countries and a neglected one in low- and middle-income countries. Despite major advances in its control as a result of milk pasteurization, its global burden is unknown, especially due the lack of surveillance data. Additionally, very little is known about control strategies. The purpose of this review was to contextualize the current knowledge about the epidemiology of zoonotic tuberculosis and to describe the available evidence regarding surveillance and control strategies in high-, middle-, and low-income countries. We conducted this review enriched by a One Health perspective, encompassing its inherent multifaceted characteristics. We found that the burden of zoonotic tuberculosis is likely to be underreported worldwide, with higher incidence in low-income countries, where the surveillance systems are even more fragile. Together with the lack of specific political commitment, surveillance data is affected by lack of a case definition and limitations of diagnostic methods. Control measures were dependent on risk factors and varied greatly between countries. This review supports the claim that a One Health approach is the most valuable concept to build capable surveillance systems, resulting in effective control measures. The disease characteristics and suggestions to implement surveillance and control programs are discussed.

人畜共患结核病在高收入国家是一种重新出现的传染病,在低收入和中等收入国家是一种被忽视的传染病。尽管由于牛奶巴氏消毒在控制其方面取得了重大进展,但其全球负担尚不清楚,特别是由于缺乏监测数据。此外,我们对控制策略知之甚少。本综述的目的是将目前关于人畜共患结核病流行病学的知识置于背景下,并描述有关高、中、低收入国家监测和控制策略的现有证据。我们进行了这一综述,丰富了一个健康的观点,包括其固有的多方面的特点。我们发现,人畜共患结核病的负担可能在世界范围内被低估,在监测系统更加脆弱的低收入国家发病率更高。由于缺乏病例定义和诊断方法的局限性,加上缺乏具体的政治承诺,监测数据受到影响。控制措施取决于风险因素,各国之间差异很大。这篇综述支持这样一种说法,即“同一个健康”方针是建立有能力的监测系统、产生有效控制措施的最有价值的概念。讨论了该病的特点和实施监测控制方案的建议。
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引用次数: 12
Emerging Evidence for Infectious Causes of Cancer in the United States. 美国癌症感染原因的新证据。
IF 5.5 2区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2019-01-31 DOI: 10.1093/epirev/mxz003
Heidi E Brown, Leslie K Dennis, Priscilla Lauro, Purva Jain, Erin Pelley, Eyal Oren

Worldwide, infectious agents currently contribute to an estimated 15% of new cancer cases. Most of these (92%, or 2 million new cancer cases) are attributable to 4 infectious agents: Helicobacter pylori, human papillomavirus, and hepatitis B and C viruses. A better understanding of how infectious agents relate to the US cancer burden may assist new diagnostic and treatment efforts. We review US-specific crude mortality rates from infection-associated cancers and describe temporal and spatial trends since 1999. We review the US-specific evidence for infection-cancer associations by reporting available estimates for attributable fractions for the infection-cancer associations. Death due to cancers with established infectious associations varies geographically, but estimates for the US attributable fraction are limited to a few observational studies. To describe the burden of infection-associated cancer in the United States, additional observational studies are necessary to estimate the prevalence of infection nationally and within subpopulations. As infectious associations emerge to explain cancer etiologies, new opportunities and challenges to reducing the burden arise. Improved estimates for the United States would help target interventions to higher-risk subpopulations.

在世界范围内,目前估计有15%的新癌症病例是由传染性病原体造成的。其中大多数(92%,即200万新发癌症病例)可归因于4种感染因子:幽门螺杆菌、人乳头瘤病毒、乙型和丙型肝炎病毒。更好地了解感染因子与美国癌症负担的关系可能有助于新的诊断和治疗工作。我们回顾了美国特定的感染相关癌症的粗死亡率,并描述了自1999年以来的时间和空间趋势。我们通过报告感染-癌症关联的可归因分数的现有估计,回顾了美国特定的感染-癌症关联的证据。与已确定的感染相关的癌症导致的死亡因地理位置而异,但对美国可归因比例的估计仅限于少数观察性研究。为了描述美国感染相关癌症的负担,需要额外的观察性研究来估计全国和亚人群内感染的患病率。随着解释癌症病因的传染性关联的出现,减轻负担的新机会和挑战出现了。改善对美国的估计将有助于针对高风险亚人群进行干预。
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引用次数: 6
Incubation Period of Shiga Toxin–Producing Escherichia coli 产志贺毒素大肠杆菌的培养期
IF 5.5 2区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2019-01-31 DOI: 10.1093/epirev/mxz001
A. Awofisayo-Okuyelu, J. Brainard, I. Hall, N. McCarthy
Abstract Shiga toxin–producing Escherichia coli are pathogenic bacteria found in the gastrointestinal tract of humans. Severe infections could lead to life-threatening complications, especially in young children and the elderly. Understanding the distribution of the incubation period, which is currently inconsistent and ambiguous, can help in controlling the burden of disease. We conducted a systematic review of outbreak investigation reports, extracted individual incubation data and summary estimates, tested for heterogeneity, classified studies into subgroups with limited heterogeneity, and undertook a meta-analysis to identify factors that may contribute to the distribution of the pathogen’s incubation period. Twenty-eight studies were identified for inclusion in the review (1 of which included information on 2 outbreaks), and the resulting I2 value was 77%, indicating high heterogeneity. Studies were classified into 5 subgroups, with the mean incubation period ranging from 3.5 to 8.1 days. The length of the incubation period increased with patient age and decreased by 7.2 hours with every 10% increase in attack rate.
摘要志贺毒素产生的大肠杆菌是在人类胃肠道中发现的致病菌。严重感染可能导致危及生命的并发症,尤其是在幼儿和老年人中。了解目前不一致和不明确的潜伏期分布,有助于控制疾病负担。我们对疫情调查报告进行了系统审查,提取了个体潜伏期数据和总结估计,测试了异质性,将研究分为异质性有限的亚组,并进行了荟萃分析,以确定可能导致病原体潜伏期分布的因素。28项研究被确定纳入综述(其中1项包括2次疫情的信息),结果I2值为77%,表明高度异质性。研究分为5个亚组,平均潜伏期为3.5至8.1天。潜伏期随着患者年龄的增长而增加,发病率每增加10%,潜伏期就减少7.2小时。
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引用次数: 4
Postexposure Effects of Vaccines on Infectious Diseases. 疫苗对传染病的暴露后影响。
IF 5.5 2区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2019-01-31 DOI: 10.1093/epirev/mxz014
Tara Gallagher, Marc Lipsitch

We searched the PubMed database for clinical trials and observational human studies about postexposure vaccination effects, targeting infections with approved vaccines and vaccines licensed outside the United States against dengue, hepatitis E, malaria, and tick-borne encephalitis. Studies of animal models, serologic testing, and pipeline vaccines were excluded. Eligible studies were evaluated by definition of exposure; attempts to distinguish pre- and postexposure effects were rated on a scale of 1 to 4. We screened 4,518 articles and ultimately identified for this review 14 clinical trials and 31 observational studies spanning 7 of the 28 vaccine-preventable diseases. For secondary attack rate, the following medians were found for postexposure vaccination effectiveness: hepatitis A, 85% (interquartile range (IQR), 28; n = 5 sources); hepatitis B, 85% (IQR, 22; n = 5 sources); measles, 83% (IQR, 21; n = 8 sources); varicella, 67% (IQR: 48; n = 9 sources); smallpox, 45% (IQR, 39; n = 4 sources); and mumps, 38% (IQR, 7; n = 2 sources). For case fatality proportions resulting from rabies and smallpox, the median vaccine postexposure efficacies were 100% (IQR, 0; n = 6 sources) and 63% (IQR, 50; n = 8 sources), respectively. Many available vaccines can modify or preclude disease if administered after exposure. This postexposure effectiveness could be important to consider during vaccine trials and while developing new vaccines.

我们在PubMed数据库中搜索了关于暴露后疫苗接种效果的临床试验和观察性人体研究,针对的是使用已批准的疫苗和美国境外许可的登革热、戊型肝炎、疟疾和蜱传脑炎疫苗的感染。排除了动物模型、血清学测试和管道疫苗的研究。符合条件的研究通过暴露定义进行评估;区分暴露前和暴露后影响的尝试按1-4分。我们筛选了4518篇文章,最终确定了14项临床试验和31项观察性研究,涵盖28种疫苗可预防疾病中的7种。对于二次发病率,暴露后疫苗接种有效性的中位数如下:甲型肝炎,85%(四分位数间距(IQR),28;n=5个来源);乙型肝炎,85%(IQR,22;n=5来源);麻疹,83%(IQR,21;n=8个来源);水痘,67%(IQR:48;n=9个来源);天花,45%(IQR,39;n=4个来源);腮腺炎,38%(IQR,7;n=2来源)。对于狂犬病和天花引起的病死率,疫苗暴露后的中位有效性分别为100%(IQR,0;n=6个来源)和63%(IQR;50;n=8个来源)。许多可用的疫苗如果在暴露后接种,可以改变或预防疾病。这种暴露后的有效性在疫苗试验和开发新疫苗时可能很重要。
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引用次数: 0
RE: "PREVALENCE OF POSTTRAUMATIC STRESS DISORDER IN PRISONERS". 回复:“囚犯中创伤后应激障碍的患病率”。
IF 5.5 2区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2018-06-01 DOI: 10.1093/epirev/mxy007
In the article “Prevalence of Posttraumatic Stress Disorder in Prisoners” by Baranyi et al. (1), there was an error in the version of the corrected proof that published online ahead of print. In the tenth sentence of the abstract, the number of smaller studies was listed as “n< 100.” The correct number is n≤ 200. This has been updated in the print and online versions of the article. The authors regret this error. REFERENCE
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引用次数: 81
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Epidemiologic Reviews
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