首页 > 最新文献

Imaging Neuroscience最新文献

英文 中文
Geometric deep learning for diffusion MRI signal reconstruction with continuous samplings (DISCUS) 用于连续采样弥散核磁共振成像信号重建的几何深度学习(DISCUS)
Pub Date : 2024-04-01 DOI: 10.1162/imag_a_00121
Christian Ewert, David Kügler, R. Stirnberg, A. Koch, A. Yendiki, Martin Reuter
Abstract Diffusion-weighted magnetic resonance imaging (dMRI) permits a detailed in-vivo analysis of neuroanatomical microstructure, invaluable for clinical and population studies. However, many measurements with different diffusion-encoding directions and possibly b-values are necessary to infer the underlying tissue microstructure within different imaging voxels accurately. Two challenges particularly limit the utility of dMRI: long acquisition times limit feasible scans to only a few directional measurements, and the heterogeneity of acquisition schemes across studies makes it difficult to combine datasets. Left unaddressed by previous learning-based methods that only accept dMRI data adhering to the specific acquisition scheme used for training, there is a need for methods that accept and predict signals for arbitrary diffusion encodings. Addressing these challenges, we describe the first geometric deep learning method for continuous dMRI signal reconstruction for arbitrary diffusion sampling schemes for both the input and output. Our method combines the reconstruction accuracy and robustness of previous learning-based methods with the flexibility of model-based methods, for example, spherical harmonics or SHORE. We demonstrate that our method outperforms model-based methods and performs on par with discrete learning-based methods on single-, multi-shell, and grid-based diffusion MRI datasets. Relevant for dMRI-derived analyses, we show that our reconstruction translates to higher-quality estimates of frequently used microstructure models compared to other reconstruction methods, enabling high-quality analyses even from very short dMRI acquisitions.
摘要 扩散加权磁共振成像(dMRI)可对神经解剖学微观结构进行详细的体内分析,对临床和人群研究非常有价值。然而,要准确推断不同成像体素内的潜在组织微观结构,必须使用不同的扩散编码方向和可能的 b 值进行多次测量。有两个挑战尤其限制了 dMRI 的实用性:较长的采集时间限制了只能进行少量方向测量的可行扫描,而不同研究中采集方案的异质性使得合并数据集变得十分困难。以往基于学习的方法只接受与训练所用特定采集方案一致的 dMRI 数据,但却无法解决这些问题,因此需要一种能接受和预测任意扩散编码信号的方法。为了应对这些挑战,我们介绍了第一种几何深度学习方法,用于对输入和输出的任意扩散采样方案进行连续的 dMRI 信号重建。我们的方法结合了以往基于学习方法的重建精度和鲁棒性,以及基于模型方法(如球谐波或 SHORE)的灵活性。我们证明了我们的方法优于基于模型的方法,并且在单壳、多壳和基于网格的弥散 MRI 数据集上的表现与基于离散学习的方法相当。在 dMRI 衍生分析方面,我们的研究表明,与其他重建方法相比,我们的重建方法能对常用的微结构模型进行更高质量的估算,甚至能对很短的 dMRI 采集数据进行高质量的分析。
{"title":"Geometric deep learning for diffusion MRI signal reconstruction with continuous samplings (DISCUS)","authors":"Christian Ewert, David Kügler, R. Stirnberg, A. Koch, A. Yendiki, Martin Reuter","doi":"10.1162/imag_a_00121","DOIUrl":"https://doi.org/10.1162/imag_a_00121","url":null,"abstract":"Abstract Diffusion-weighted magnetic resonance imaging (dMRI) permits a detailed in-vivo analysis of neuroanatomical microstructure, invaluable for clinical and population studies. However, many measurements with different diffusion-encoding directions and possibly b-values are necessary to infer the underlying tissue microstructure within different imaging voxels accurately. Two challenges particularly limit the utility of dMRI: long acquisition times limit feasible scans to only a few directional measurements, and the heterogeneity of acquisition schemes across studies makes it difficult to combine datasets. Left unaddressed by previous learning-based methods that only accept dMRI data adhering to the specific acquisition scheme used for training, there is a need for methods that accept and predict signals for arbitrary diffusion encodings. Addressing these challenges, we describe the first geometric deep learning method for continuous dMRI signal reconstruction for arbitrary diffusion sampling schemes for both the input and output. Our method combines the reconstruction accuracy and robustness of previous learning-based methods with the flexibility of model-based methods, for example, spherical harmonics or SHORE. We demonstrate that our method outperforms model-based methods and performs on par with discrete learning-based methods on single-, multi-shell, and grid-based diffusion MRI datasets. Relevant for dMRI-derived analyses, we show that our reconstruction translates to higher-quality estimates of frequently used microstructure models compared to other reconstruction methods, enabling high-quality analyses even from very short dMRI acquisitions.","PeriodicalId":507939,"journal":{"name":"Imaging Neuroscience","volume":"55 2","pages":"1-18"},"PeriodicalIF":0.0,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140764635","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Reduced cortical complexity in ventromedial prefrontal cortex is associated with a greater preference for risky and immediate rewards 腹内侧前额叶皮层复杂性的降低与更偏好风险和即时奖励有关
Pub Date : 2024-04-01 DOI: 10.1162/imag_a_00143
F. Bergström, Caryn Lerman, J. Kable
Abstract In our everyday lives, we are often faced with situations in which we make choices that involve risky or delayed rewards. However, the extent to which we are willing to accept larger risky (over smaller certain) or larger delayed (over smaller immediate) rewards varies across individuals. Here, we investigated the relationship between cortical complexity in the medial prefrontal cortex and individual differences in risky and intertemporal preferences. We found that reduced cortical complexity in left ventromedial prefrontal cortex (vmPFC) was associated with a greater preference for risky and immediate rewards. In addition to these common structural associations in left vmPFC, we also found associations between lower cortical complexity and a greater preference for immediate rewards that extended into the left dorsomedial prefrontal cortex and right vmPFC. Furthermore, these structural associations occurred in a context where a preference for risky rewards was correlated with a preference for delayed rewards across individuals. These results suggest that risk and intertemporal preferences are distinct but related, and likely influenced by multiple neurocognitive processes, with cortical complexity in vmPFC reflecting one shared aspect possibly related to impulsiveness in terms of risky and impatient economic choice. Future work should elucidate the complex relationships between brain structure and behavioral preferences.
摘要 在日常生活中,我们经常会遇到涉及风险或延迟回报的选择情况。然而,我们在多大程度上愿意接受较大的风险性(而不是较小的确定性)或较大的延迟性(而不是较小的即时性)回报,因人而异。在这里,我们研究了内侧前额叶皮层的皮质复杂性与风险和时际偏好的个体差异之间的关系。我们发现,左侧腹内侧前额叶皮层(vmPFC)皮层复杂性的降低与对风险性和即时性奖励的更大偏好有关。除了左侧腹外侧前额叶皮层的这些常见结构关联外,我们还发现皮层复杂性降低与更偏好即时奖励之间的关联延伸到了左侧背内侧前额叶皮层和右侧腹外侧前额叶皮层。此外,这些结构性关联是在不同个体对风险奖励的偏好与对延迟奖励的偏好相关的情况下发生的。这些结果表明,风险偏好和时际偏好是不同的,但又是相关的,很可能受到多种神经认知过程的影响,而前脑皮质的复杂性反映了可能与冲动有关的一个共同方面,即风险和急躁的经济选择。未来的工作应阐明大脑结构与行为偏好之间的复杂关系。
{"title":"Reduced cortical complexity in ventromedial prefrontal cortex is associated with a greater preference for risky and immediate rewards","authors":"F. Bergström, Caryn Lerman, J. Kable","doi":"10.1162/imag_a_00143","DOIUrl":"https://doi.org/10.1162/imag_a_00143","url":null,"abstract":"Abstract In our everyday lives, we are often faced with situations in which we make choices that involve risky or delayed rewards. However, the extent to which we are willing to accept larger risky (over smaller certain) or larger delayed (over smaller immediate) rewards varies across individuals. Here, we investigated the relationship between cortical complexity in the medial prefrontal cortex and individual differences in risky and intertemporal preferences. We found that reduced cortical complexity in left ventromedial prefrontal cortex (vmPFC) was associated with a greater preference for risky and immediate rewards. In addition to these common structural associations in left vmPFC, we also found associations between lower cortical complexity and a greater preference for immediate rewards that extended into the left dorsomedial prefrontal cortex and right vmPFC. Furthermore, these structural associations occurred in a context where a preference for risky rewards was correlated with a preference for delayed rewards across individuals. These results suggest that risk and intertemporal preferences are distinct but related, and likely influenced by multiple neurocognitive processes, with cortical complexity in vmPFC reflecting one shared aspect possibly related to impulsiveness in terms of risky and impatient economic choice. Future work should elucidate the complex relationships between brain structure and behavioral preferences.","PeriodicalId":507939,"journal":{"name":"Imaging Neuroscience","volume":"76 1","pages":"1-14"},"PeriodicalIF":0.0,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140785374","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Graph theory-based analysis reveals neural anatomical network alterations in chronic post-traumatic stress disorder 基于图论的分析揭示了慢性创伤后应激障碍的神经解剖网络改变
Pub Date : 2024-04-01 DOI: 10.1162/imag_a_00141
Chuan Huang, Thomas Hagan, Minos Kritikos, Daniel Suite, Tianyun Zhao, Melissa A. Carr, Stephanie Meija-Santiago, A. Invernizzi, Megan K. Horton, Roberto G. Lucchini, Evelyn J. Bromet, Roman Kotov, Sean A P Clouston, B. Luft
Abstract Multimodal imaging using network connectivity techniques shows promise for investigating neuropathology influencing Post-Traumatic Stress Disorder (PTSD) symptom maintenance and course. We recruited World Trade Center (WTC) responders who continued to suffer from chronic PTSD into a diffusion tensor neuroimaging protocol (n = 100), along with nine unexposed controls without PTSD from other sources. Using a graph theory approach to probe network alterations in brain diffusion images, we calculated weighted characteristics path length (wCPL) as a surrogate marker for the effective neuroanatomical distance between anatomical nodes. The sample (N = 109; 47 with chronic PTSD) was in their mid-fifties, and the majority were male. Responders were matched in terms of cognitive performance, occupation, and demographics. The anatomical connectivity graph was constructed for each participant using deterministic diffusion tractography. We identified a significant difference in wCPL between trauma-exposed WTC responders (Cohen’s d = 0.42, p < 0.001) that was highest in people with PTSD, and not explained by WTC exposure severity or duration. We also found that wCPL was associated with PTSD symptom severity in responders with PTSD. In the largest study to date to examine the relationship between chronic PTSD and anatomy, we examined the anatomical topography of neural connections and found that wCPL differed between the PTSD+ and PTSD- diagnostic categories.
摘要 采用网络连接技术的多模态成像技术有望研究影响创伤后应激障碍(PTSD)症状维持和病程的神经病理学。我们招募了继续患有慢性创伤后应激障碍的世贸中心(WTC)响应者(n = 100)和九名未接触过创伤后应激障碍的对照者(n = 100)进行弥散张量神经成像。我们采用图论方法探查大脑弥散图像中的网络变化,计算加权特征路径长度(wCPL),作为解剖节点之间有效神经解剖距离的替代标记。样本(N = 109;47 人患有慢性创伤后应激障碍)年龄在五十多岁,大多数为男性。受试者在认知能力、职业和人口统计学方面都是匹配的。我们使用确定性扩散束成像技术为每位受试者构建了解剖连接图。我们发现,受到创伤的世界贸易中心应答者之间的 wCPL 存在明显差异(Cohen's d = 0.42,p < 0.001),其中创伤后应激障碍患者的差异最大,而世界贸易中心暴露的严重程度或持续时间则无法解释这种差异。我们还发现,wCPL 与创伤后应激障碍患者的创伤后应激障碍症状严重程度有关。在迄今为止研究慢性创伤后应激障碍与解剖结构之间关系的最大规模研究中,我们检查了神经连接的解剖拓扑结构,发现 wCPL 在创伤后应激障碍+ 和创伤后应激障碍- 诊断类别之间存在差异。
{"title":"Graph theory-based analysis reveals neural anatomical network alterations in chronic post-traumatic stress disorder","authors":"Chuan Huang, Thomas Hagan, Minos Kritikos, Daniel Suite, Tianyun Zhao, Melissa A. Carr, Stephanie Meija-Santiago, A. Invernizzi, Megan K. Horton, Roberto G. Lucchini, Evelyn J. Bromet, Roman Kotov, Sean A P Clouston, B. Luft","doi":"10.1162/imag_a_00141","DOIUrl":"https://doi.org/10.1162/imag_a_00141","url":null,"abstract":"Abstract Multimodal imaging using network connectivity techniques shows promise for investigating neuropathology influencing Post-Traumatic Stress Disorder (PTSD) symptom maintenance and course. We recruited World Trade Center (WTC) responders who continued to suffer from chronic PTSD into a diffusion tensor neuroimaging protocol (n = 100), along with nine unexposed controls without PTSD from other sources. Using a graph theory approach to probe network alterations in brain diffusion images, we calculated weighted characteristics path length (wCPL) as a surrogate marker for the effective neuroanatomical distance between anatomical nodes. The sample (N = 109; 47 with chronic PTSD) was in their mid-fifties, and the majority were male. Responders were matched in terms of cognitive performance, occupation, and demographics. The anatomical connectivity graph was constructed for each participant using deterministic diffusion tractography. We identified a significant difference in wCPL between trauma-exposed WTC responders (Cohen’s d = 0.42, p < 0.001) that was highest in people with PTSD, and not explained by WTC exposure severity or duration. We also found that wCPL was associated with PTSD symptom severity in responders with PTSD. In the largest study to date to examine the relationship between chronic PTSD and anatomy, we examined the anatomical topography of neural connections and found that wCPL differed between the PTSD+ and PTSD- diagnostic categories.","PeriodicalId":507939,"journal":{"name":"Imaging Neuroscience","volume":"398 1","pages":"1-11"},"PeriodicalIF":0.0,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140758035","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Stability and variation of brain-behavior correlation patterns across measures of social support 不同社会支持措施之间大脑行为相关模式的稳定性和变异性
Pub Date : 2024-04-01 DOI: 10.1162/imag_a_00133
Haily Merritt, Joshua Faskowitz, Marlen Z. Gonzalez, Richard F. Betzel
Abstract The social environment has a critical influence on human development, cognition, and health. Research in health psychology and social neuroscience indicate an urgent need to understand how social relationships are associated with brain function and organization. To address this, we apply multilayer modeling and modularity maximization—both established tools in network neuroscience—to jointly cluster patterns of brain-behavior associations for seven social support measures. By using network approaches to map and analyze the connectivity between all pairs of brain regions simultaneously, we can clarify how relationships between brain regions (e.g. connectivity) change as a function of social relationships. This multilayer approach enables direct comparison of brain-behavior associations across social contexts for all brain regions and builds on both ecological and developmental neuroscientific findings and network neuroscientific approaches. In particular, we find that subcortical and control systems are especially sensitive to different constructs of perceived social support. Network nodes in these systems are highly flexible; their community affiliations, which reflect groups of nodes with similar patterns of brain-behavior associations, differ across social support measures. Additionally, our application of multilayer modeling to patterns of brain-behavior correlations, as opposed to just functional connectivity, represents an innovation in how multilayer models are used in human neuroscience. More than that, it offers a generalizable technique for studying the stability and variation of brain-behavior associations.
摘要 社会环境对人类的发展、认知和健康有着至关重要的影响。健康心理学和社会神经科学的研究表明,迫切需要了解社会关系如何与大脑功能和组织相关联。为了解决这个问题,我们应用多层建模和模块化最大化--这两种网络神经科学的成熟工具--对七种社会支持措施的大脑行为关联模式进行联合聚类。通过使用网络方法同时映射和分析所有脑区对之间的连通性,我们可以阐明脑区之间的关系(如连通性)是如何随着社会关系的变化而变化的。这种多层方法可以直接比较所有脑区在不同社会背景下的大脑行为关联,并建立在生态和发育神经科学研究成果以及网络神经科学方法的基础之上。特别是,我们发现皮层下和控制系统对感知到的社会支持的不同结构特别敏感。这些系统中的网络节点具有高度灵活性;它们的社区从属关系反映了具有类似大脑行为关联模式的节点群,但在不同的社会支持度量中,它们的社区从属关系也不尽相同。此外,我们将多层建模应用于大脑行为关联模式,而不仅仅是功能连接,这代表了多层模型在人类神经科学中应用方式的创新。不仅如此,它还为研究大脑行为关联的稳定性和变化提供了一种可推广的技术。
{"title":"Stability and variation of brain-behavior correlation patterns across measures of social support","authors":"Haily Merritt, Joshua Faskowitz, Marlen Z. Gonzalez, Richard F. Betzel","doi":"10.1162/imag_a_00133","DOIUrl":"https://doi.org/10.1162/imag_a_00133","url":null,"abstract":"Abstract The social environment has a critical influence on human development, cognition, and health. Research in health psychology and social neuroscience indicate an urgent need to understand how social relationships are associated with brain function and organization. To address this, we apply multilayer modeling and modularity maximization—both established tools in network neuroscience—to jointly cluster patterns of brain-behavior associations for seven social support measures. By using network approaches to map and analyze the connectivity between all pairs of brain regions simultaneously, we can clarify how relationships between brain regions (e.g. connectivity) change as a function of social relationships. This multilayer approach enables direct comparison of brain-behavior associations across social contexts for all brain regions and builds on both ecological and developmental neuroscientific findings and network neuroscientific approaches. In particular, we find that subcortical and control systems are especially sensitive to different constructs of perceived social support. Network nodes in these systems are highly flexible; their community affiliations, which reflect groups of nodes with similar patterns of brain-behavior associations, differ across social support measures. Additionally, our application of multilayer modeling to patterns of brain-behavior correlations, as opposed to just functional connectivity, represents an innovation in how multilayer models are used in human neuroscience. More than that, it offers a generalizable technique for studying the stability and variation of brain-behavior associations.","PeriodicalId":507939,"journal":{"name":"Imaging Neuroscience","volume":"16 3","pages":"1-18"},"PeriodicalIF":0.0,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140785128","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Testing PET-[11C]ABP688 as a tool to quantify glutamate release in vivo 将 PET-[11C]ABP688 作为量化体内谷氨酸释放的工具进行测试
Pub Date : 2024-04-01 DOI: 10.1162/imag_a_00126
Hussein Bdair, Marie Sato-Fitoussi, Stéphane Planche, L. Moquin, M. Kang, A. Aliaga, A. Nagano-Saito, Kelly Smart, S. M. Cox, Jamie Near, A. Aguilar-Valles, G. Massarweh, Pedro Rosa-Neto, C. Benkelfat, j.-p. soucy, Alexey Kostikov, Alain Gratton, M. Leyton
Abstract The excitatory neurotransmitter glutamate plays a critical role in experience-dependent neuroplasticity, including addiction-related processes. To date, however, it is not possible to measure glutamate release in the living human brain. Positron emission tomography (PET) with [11C]ABP688, a selective allosteric antagonist of metabotropic type 5 glutamate (mGlu5) receptors, could offer an effective strategy. To test this proposition, we conducted a series of studies in rats using microdialysis and [11C]ABP688 microPET imaging, and in humans using PET and magnetic resonance spectroscopy (MRS). Significant calcium-dependent glutamate release was identified in the ventral striatum of awake rats (190.5 ± 34.7%, p < 0.05; n = 7) following administration of a low dose of ethanol (EtOH; 20%, 0.5 g/kg), a pharmacological challenge readily translatable to human research. Simultaneous microdialysis and microPET studies in anesthetized rats yielded concurrent increases in glutamate release (126.9 ± 5.3%, p < 0.001; n = 11) and decreases in striatal [11C]ABP688 binding (6.8 ± 9.6%, p < 0.05). These latter two effects, however, were not significantly correlated (r = 0.25, p = 0.46). In humans, a laboratory stressor yielded significant changes in self-reported mood (ps < 0.041), sympathetic system activations (ps < 0.042), and the MRS index of striatal glutamate reuptake following excitatory neurotransmission, Glx/Cr levels (p = 0.048). These effects, however, were not accompanied by significant changes in [11C]ABP688 BPND (ps > 0.21, n = 9) or correlated with each other (ps > 0.074). Together, these studies document EtOH-induced glutamate release from neurons, EtOH-induced decreases in [11C]ABP688 binding, and stress-induced changes in glutamate turnover, yet fail to provide evidence that the PET [11C]ABP688 method can be exploited to quantify moderate changes in glutamate release. The results underscore the need for highly controlled testing conditions during PET measures of mGlu5 receptors.
摘要 兴奋性神经递质谷氨酸在依赖经验的神经可塑性(包括成瘾相关过程)中发挥着关键作用。然而,迄今为止还无法测量活体人脑中谷氨酸的释放。使用[11C]ABP688(一种选择性异位拮抗剂,能拮抗代谢型 5 谷氨酸(mGlu5)受体)进行正电子发射断层扫描(PET)可提供一种有效的策略。为了验证这一观点,我们使用微透析和[11C]ABP688 microPET 成像技术在大鼠身上进行了一系列研究,并使用 PET 和磁共振光谱(MRS)技术在人类身上进行了一系列研究。给清醒大鼠腹侧纹状体注射低剂量乙醇(EtOH;20%,0.5 克/千克)后,发现大鼠腹侧纹状体有明显的钙依赖性谷氨酸释放(190.5 ± 34.7%,p < 0.05;n = 7),这种药理学挑战很容易转化为人体研究。在麻醉大鼠身上同时进行的微透析和 microPET 研究发现,谷氨酸释放量同时增加(126.9 ± 5.3%,p < 0.001;n = 11),纹状体 [11C]ABP688 结合量减少(6.8 ± 9.6%,p < 0.05)。然而,后两种效应并没有明显的相关性(r = 0.25,p = 0.46)。在人类中,实验室压力会导致自我报告的情绪(PS < 0.041)、交感神经系统激活(PS < 0.042)和兴奋性神经传递后纹状体谷氨酸再摄取的 MRS 指数 Glx/Cr 水平(P = 0.048)发生显著变化。然而,这些影响并不伴随[11C]ABP688 BPND 的显著变化(ps > 0.21,n = 9),也不相互关联(ps > 0.074)。总之,这些研究记录了乙醇诱导的神经元谷氨酸释放、乙醇诱导的[11C]ABP688结合力下降和应激诱导的谷氨酸周转变化,但未能提供证据证明 PET [11C]ABP688 方法可用于量化谷氨酸释放的适度变化。这些结果突出表明,在对 mGlu5 受体进行 PET 测量时,需要高度受控的测试条件。
{"title":"Testing PET-[11C]ABP688 as a tool to quantify glutamate release in vivo","authors":"Hussein Bdair, Marie Sato-Fitoussi, Stéphane Planche, L. Moquin, M. Kang, A. Aliaga, A. Nagano-Saito, Kelly Smart, S. M. Cox, Jamie Near, A. Aguilar-Valles, G. Massarweh, Pedro Rosa-Neto, C. Benkelfat, j.-p. soucy, Alexey Kostikov, Alain Gratton, M. Leyton","doi":"10.1162/imag_a_00126","DOIUrl":"https://doi.org/10.1162/imag_a_00126","url":null,"abstract":"Abstract The excitatory neurotransmitter glutamate plays a critical role in experience-dependent neuroplasticity, including addiction-related processes. To date, however, it is not possible to measure glutamate release in the living human brain. Positron emission tomography (PET) with [11C]ABP688, a selective allosteric antagonist of metabotropic type 5 glutamate (mGlu5) receptors, could offer an effective strategy. To test this proposition, we conducted a series of studies in rats using microdialysis and [11C]ABP688 microPET imaging, and in humans using PET and magnetic resonance spectroscopy (MRS). Significant calcium-dependent glutamate release was identified in the ventral striatum of awake rats (190.5 ± 34.7%, p < 0.05; n = 7) following administration of a low dose of ethanol (EtOH; 20%, 0.5 g/kg), a pharmacological challenge readily translatable to human research. Simultaneous microdialysis and microPET studies in anesthetized rats yielded concurrent increases in glutamate release (126.9 ± 5.3%, p < 0.001; n = 11) and decreases in striatal [11C]ABP688 binding (6.8 ± 9.6%, p < 0.05). These latter two effects, however, were not significantly correlated (r = 0.25, p = 0.46). In humans, a laboratory stressor yielded significant changes in self-reported mood (ps < 0.041), sympathetic system activations (ps < 0.042), and the MRS index of striatal glutamate reuptake following excitatory neurotransmission, Glx/Cr levels (p = 0.048). These effects, however, were not accompanied by significant changes in [11C]ABP688 BPND (ps > 0.21, n = 9) or correlated with each other (ps > 0.074). Together, these studies document EtOH-induced glutamate release from neurons, EtOH-induced decreases in [11C]ABP688 binding, and stress-induced changes in glutamate turnover, yet fail to provide evidence that the PET [11C]ABP688 method can be exploited to quantify moderate changes in glutamate release. The results underscore the need for highly controlled testing conditions during PET measures of mGlu5 receptors.","PeriodicalId":507939,"journal":{"name":"Imaging Neuroscience","volume":"309 ","pages":"1-18"},"PeriodicalIF":0.0,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140755811","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Improving auditory attention decoding by classifying intracranial responses to glimpsed and masked acoustic events 通过对瞥见和掩蔽声音事件的颅内反应进行分类改进听觉注意力解码
Pub Date : 2024-04-01 DOI: 10.1162/imag_a_00148
Vinay S. Raghavan, James A. O'Sullivan, J. Herrero, Stephan Bickel, A. Mehta, N. Mesgarani
Abstract Listeners with hearing loss have trouble following a conversation in multitalker environments. While modern hearing aids can generally amplify speech, these devices are unable to tune into a target speaker without first knowing to which speaker a user aims to attend. Brain-controlled hearing aids have been proposed using auditory attention decoding (AAD) methods, but current methods use the same model to compare the speech stimulus and neural response, regardless of the dynamic overlap between talkers which is known to influence neural encoding. Here, we propose a novel framework that directly classifies event-related potentials (ERPs) evoked by glimpsed and masked acoustic events to determine whether the source of the event was attended. We present a system that identifies auditory events using the local maxima in the envelope rate of change, assesses the temporal masking of auditory events relative to competing speakers, and utilizes masking-specific ERP classifiers to determine if the source of the event was attended. Using intracranial electrophysiological recordings, we showed that high gamma ERPs from recording sites in auditory cortex can effectively decode the attention of subjects. This method of AAD provides higher accuracy, shorter switch times, and more stable decoding results compared with traditional correlational methods, permitting the quick and accurate detection of changes in a listener’s attentional focus. This framework also holds unique potential for detecting instances of divided attention and inattention. Overall, we extend the scope of AAD algorithms by introducing the first linear, direct-classification method for determining a listener’s attentional focus that leverages the latest research in multitalker speech perception. This work represents another step toward informing the development of effective and intuitive brain-controlled hearing assistive devices.
摘要 有听力损失的听众在多人交谈环境中很难跟上谈话内容。虽然现代助听器一般都能放大语音,但这些设备无法在不知道用户想要听哪位发言者讲话的情况下调整到目标发言者的位置。大脑控制助听器已被提出使用听觉注意力解码(AAD)方法,但目前的方法使用相同的模型来比较语音刺激和神经反应,而不考虑说话者之间的动态重叠,众所周知,这种重叠会影响神经编码。在这里,我们提出了一个新颖的框架,它能直接对瞥见的和掩蔽的声学事件诱发的事件相关电位(ERPs)进行分类,以确定事件的来源是否被关注。我们提出的系统能利用包络变化率的局部最大值识别听觉事件,评估听觉事件相对于竞争扬声器的时间掩蔽,并利用掩蔽特定的 ERP 分类器确定事件源是否被注意到。通过颅内电生理记录,我们发现来自听觉皮层记录点的高伽马ERP能有效解码受试者的注意力。与传统的相关方法相比,这种 AAD 方法具有更高的准确性、更短的切换时间和更稳定的解码结果,可以快速准确地检测出听者注意力焦点的变化。这一框架还具有检测注意力分散和不集中情况的独特潜力。总之,我们通过引入第一种线性、直接分类方法来确定听者的注意力焦点,并利用多语者语音感知方面的最新研究成果,扩展了 AAD 算法的范围。这项工作标志着我们向开发有效、直观的脑控听力辅助设备又迈进了一步。
{"title":"Improving auditory attention decoding by classifying intracranial responses to glimpsed and masked acoustic events","authors":"Vinay S. Raghavan, James A. O'Sullivan, J. Herrero, Stephan Bickel, A. Mehta, N. Mesgarani","doi":"10.1162/imag_a_00148","DOIUrl":"https://doi.org/10.1162/imag_a_00148","url":null,"abstract":"Abstract Listeners with hearing loss have trouble following a conversation in multitalker environments. While modern hearing aids can generally amplify speech, these devices are unable to tune into a target speaker without first knowing to which speaker a user aims to attend. Brain-controlled hearing aids have been proposed using auditory attention decoding (AAD) methods, but current methods use the same model to compare the speech stimulus and neural response, regardless of the dynamic overlap between talkers which is known to influence neural encoding. Here, we propose a novel framework that directly classifies event-related potentials (ERPs) evoked by glimpsed and masked acoustic events to determine whether the source of the event was attended. We present a system that identifies auditory events using the local maxima in the envelope rate of change, assesses the temporal masking of auditory events relative to competing speakers, and utilizes masking-specific ERP classifiers to determine if the source of the event was attended. Using intracranial electrophysiological recordings, we showed that high gamma ERPs from recording sites in auditory cortex can effectively decode the attention of subjects. This method of AAD provides higher accuracy, shorter switch times, and more stable decoding results compared with traditional correlational methods, permitting the quick and accurate detection of changes in a listener’s attentional focus. This framework also holds unique potential for detecting instances of divided attention and inattention. Overall, we extend the scope of AAD algorithms by introducing the first linear, direct-classification method for determining a listener’s attentional focus that leverages the latest research in multitalker speech perception. This work represents another step toward informing the development of effective and intuitive brain-controlled hearing assistive devices.","PeriodicalId":507939,"journal":{"name":"Imaging Neuroscience","volume":"339 4","pages":"1-19"},"PeriodicalIF":0.0,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140781026","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Sensory modality and information domain contribute jointly to dual-task interference between working memory and perceptual processing 感觉模式和信息领域共同导致了工作记忆和知觉处理之间的双任务干扰
Pub Date : 2024-04-01 DOI: 10.1162/imag_a_00130
Justin T. Fleming, J. M. Njoroge, Abigail L. Noyce, Tyler K. Perrachione, Barbara G. Shinn-Cunningham
Abstract Making sense of our environment requires us to extract temporal and spatial information from multiple sensory modalities, particularly audition and vision. Often, we must hold this sensory information in working memory (WM) to guide future actions, while simultaneously processing new sensory inputs as they arise. However, these processes of WM maintenance and perceptual processing can interfere with one another when the tasks rely on similar cognitive resources. fMRI studies have uncovered attention and WM networks that are specialized for either auditory-temporal or visual-spatial processing; the functional specialization of these networks makes specific predictions about patterns of interference between perceptual processing and WM. Specifically, we hypothesized that dual-task interference should increase when the tasks share a common sensory modality, a common information domain (temporal vs. spatial processing), or both. To test these predictions, we asked participants to store temporal or spatial information about auditory or visual stimuli in WM. On some trials, participants also performed an intervening auditory task, which was either temporal or spatial, during WM retention. Errors on WM recall and perceptual judgment tasks both generally increased when the tasks relied on shared modality- and domain-biased resources, with maximal interference when both tasks were auditory-temporal. Pupil dilations were also larger and started earlier when both tasks were auditory-temporal, indicating an increase in cognitive effort to overcome the interference. Event-related potentials (ERPs) and alpha-band oscillatory activity revealed neural signatures of domain-based interference even when the tasks were presented in different sensory modalities, when behavioral differences were masked by ceiling effects. These results demonstrate that sensory modality and information domain jointly affect how task information is represented in WM, consistent with past work demonstrating how tasks engage complementary auditory-temporal and visual-spatial cognitive control networks.
摘要 要了解我们所处的环境,需要我们从多种感官模式(尤其是听觉和视觉)中提取时间和空间信息。通常情况下,我们必须将这些感官信息保存在工作记忆(WM)中以指导未来的行动,同时还要处理新出现的感官输入。fMRI研究发现了专门用于听觉-时间或视觉-空间处理的注意力和工作记忆网络;这些网络的功能特化对知觉处理和工作记忆之间的干扰模式做出了具体预测。具体来说,我们假设当任务具有共同的感官模式、共同的信息领域(时间处理与空间处理)或两者兼而有之时,双任务干扰就会增加。为了验证这些预测,我们要求参与者在 WM 中存储有关听觉或视觉刺激的时间或空间信息。在某些试验中,受试者还在 WM 保留期间执行了一项时间或空间的听觉任务。当任务依赖于共享的模态和领域偏倚资源时,WM 回忆和知觉判断任务的错误率都会普遍增加,当两个任务都是听觉-时间任务时,干扰最大。当两个任务都是听觉-时间任务时,瞳孔放大的幅度也更大,开始的时间也更早,这表明克服干扰的认知努力有所增加。事件相关电位(ERPs)和α波段振荡活动揭示了基于领域干扰的神经特征,即使任务以不同的感官模式呈现,行为差异也会被上限效应所掩盖。这些结果表明,感官模式和信息领域会共同影响任务信息在 WM 中的表征方式,这与过去的研究结果一致,证明了任务是如何调动互补的听觉-时间和视觉-空间认知控制网络的。
{"title":"Sensory modality and information domain contribute jointly to dual-task interference between working memory and perceptual processing","authors":"Justin T. Fleming, J. M. Njoroge, Abigail L. Noyce, Tyler K. Perrachione, Barbara G. Shinn-Cunningham","doi":"10.1162/imag_a_00130","DOIUrl":"https://doi.org/10.1162/imag_a_00130","url":null,"abstract":"Abstract Making sense of our environment requires us to extract temporal and spatial information from multiple sensory modalities, particularly audition and vision. Often, we must hold this sensory information in working memory (WM) to guide future actions, while simultaneously processing new sensory inputs as they arise. However, these processes of WM maintenance and perceptual processing can interfere with one another when the tasks rely on similar cognitive resources. fMRI studies have uncovered attention and WM networks that are specialized for either auditory-temporal or visual-spatial processing; the functional specialization of these networks makes specific predictions about patterns of interference between perceptual processing and WM. Specifically, we hypothesized that dual-task interference should increase when the tasks share a common sensory modality, a common information domain (temporal vs. spatial processing), or both. To test these predictions, we asked participants to store temporal or spatial information about auditory or visual stimuli in WM. On some trials, participants also performed an intervening auditory task, which was either temporal or spatial, during WM retention. Errors on WM recall and perceptual judgment tasks both generally increased when the tasks relied on shared modality- and domain-biased resources, with maximal interference when both tasks were auditory-temporal. Pupil dilations were also larger and started earlier when both tasks were auditory-temporal, indicating an increase in cognitive effort to overcome the interference. Event-related potentials (ERPs) and alpha-band oscillatory activity revealed neural signatures of domain-based interference even when the tasks were presented in different sensory modalities, when behavioral differences were masked by ceiling effects. These results demonstrate that sensory modality and information domain jointly affect how task information is represented in WM, consistent with past work demonstrating how tasks engage complementary auditory-temporal and visual-spatial cognitive control networks.","PeriodicalId":507939,"journal":{"name":"Imaging Neuroscience","volume":"103 2","pages":"1-22"},"PeriodicalIF":0.0,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140790347","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Functional organization of the human corpus callosum unveiled with BOLD-fMRI gradients 利用 BOLD-fMRI 梯度揭示人类胼胝体的功能组织
Pub Date : 2024-03-01 DOI: 10.1162/imag_a_00115
Huan Huang, Yuchao Jiang, Hechun Li, Hanxi Wu, Xiaorong Feng, Jinnan Gong, Sisi Jiang, Dezhong Yao, C. Luo
Abstract Gradients capture the underlying functional organization of the brain. Cortical gradients have been well characterized, however very little is known about the underlying gradient of the white matter. Here, we proposed a functionally gradient mapping of the corpus callosum by using blood-oxygen-level-dependent functional magnetic resonance imaging (BOLD-fMRI), which for the first time uncovered three distinct but stable spatial axes: posterior-anterior, dorsal-ventral, and left-right. The three spatial patterns were replicated in another independent cohort and robust across scanning conditions. We further associated the three gradient maps with brain anatomy, connectome, and task-related brain functions, by using structural magnetic resonance imaging, both resting-state and task fMRI, and diffusion tensor imaging data. The posterior-anterior gradient distribution of the corpus callosum showed a similar pattern with the cerebral cortex, gradually extending from the primary cortex to the transmodal cortex. The dorsal-ventral gradient distribution revealed an N-shaped pattern from the primary cortex to the higher-order cognitive cortex. The posterior-anterior and dorsal-ventral gradient maps were also associated with white-matter microstructures, such as fractional anisotropy and myelin water fraction. The left-right gradient showed an inverted V-shaped pattern, which delineated the inter-hemisphere separation. These findings provide fundamental insight into the functional organization of the human corpus callosum, unveiling potential patterns of functional interaction with the cerebral cortex and their associations with cognitive behaviors.
摘要 梯度反映了大脑的基本功能组织。大脑皮层梯度已被很好地描述,但对白质的基本梯度却知之甚少。在此,我们利用血氧水平依赖性功能磁共振成像(BOLD-fMRI)提出了胼胝体的功能梯度图谱,首次发现了三个不同但稳定的空间轴:后-前、背-腹和左-右。这三种空间模式在另一个独立队列中得到了复制,并在不同扫描条件下保持稳定。通过使用结构磁共振成像、静息态和任务 fMRI 以及弥散张量成像数据,我们进一步将这三种梯度图与大脑解剖、连接组以及与任务相关的大脑功能联系起来。胼胝体的前后梯度分布显示出与大脑皮层相似的模式,从初级皮层逐渐延伸到跨模态皮层。背腹梯度分布显示了从初级皮层到高阶认知皮层的 N 型模式。后-前和背-腹梯度图还与白质微结构有关,如分数各向异性和髓鞘水分数。左右梯度图呈倒 V 形,划分了大脑半球之间的分隔。这些发现从根本上揭示了人类胼胝体的功能组织,揭示了其与大脑皮层功能相互作用的潜在模式及其与认知行为的关联。
{"title":"Functional organization of the human corpus callosum unveiled with BOLD-fMRI gradients","authors":"Huan Huang, Yuchao Jiang, Hechun Li, Hanxi Wu, Xiaorong Feng, Jinnan Gong, Sisi Jiang, Dezhong Yao, C. Luo","doi":"10.1162/imag_a_00115","DOIUrl":"https://doi.org/10.1162/imag_a_00115","url":null,"abstract":"Abstract Gradients capture the underlying functional organization of the brain. Cortical gradients have been well characterized, however very little is known about the underlying gradient of the white matter. Here, we proposed a functionally gradient mapping of the corpus callosum by using blood-oxygen-level-dependent functional magnetic resonance imaging (BOLD-fMRI), which for the first time uncovered three distinct but stable spatial axes: posterior-anterior, dorsal-ventral, and left-right. The three spatial patterns were replicated in another independent cohort and robust across scanning conditions. We further associated the three gradient maps with brain anatomy, connectome, and task-related brain functions, by using structural magnetic resonance imaging, both resting-state and task fMRI, and diffusion tensor imaging data. The posterior-anterior gradient distribution of the corpus callosum showed a similar pattern with the cerebral cortex, gradually extending from the primary cortex to the transmodal cortex. The dorsal-ventral gradient distribution revealed an N-shaped pattern from the primary cortex to the higher-order cognitive cortex. The posterior-anterior and dorsal-ventral gradient maps were also associated with white-matter microstructures, such as fractional anisotropy and myelin water fraction. The left-right gradient showed an inverted V-shaped pattern, which delineated the inter-hemisphere separation. These findings provide fundamental insight into the functional organization of the human corpus callosum, unveiling potential patterns of functional interaction with the cerebral cortex and their associations with cognitive behaviors.","PeriodicalId":507939,"journal":{"name":"Imaging Neuroscience","volume":"153 2","pages":"1-22"},"PeriodicalIF":0.0,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140403085","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Alpha peak frequency affects visual performance beyond temporal resolution 阿尔法峰频率对视觉表现的影响超越了时间分辨率
Pub Date : 2024-03-01 DOI: 10.1162/imag_a_00107
Maëlan Q. Menétrey, M. Roinishvili, E. Chkonia, Michael H. Herzog, David Pascucci
Abstract Recent work suggests that the individual alpha peak frequency (IAPF) reflects the temporal resolution of visual processing: individuals with higher IAPF can segregate stimuli at shorter intervals compared to those with lower IAPF. However, this evidence mainly comes from studies focusing on short intervals, with stimulus onset asynchronies (SOA) rarely extending beyond a single alpha cycle (e.g., ~100 ms). Here, we investigated the relationship between IAPF and performance in visual backward masking (VBM), which allowed us to test the effects of IAPF for longer SOAs than an alpha cycle. A group of healthy controls (N = 79) and schizophrenia patients (N = 121), who generally exhibit lower IAPF, were tested in conditions with a Vernier shown alone, a Vernier followed by a mask at two SOAs (30 and 150 ms), or only a mask. Our results show that IAPF can predict VBM performance in all conditions with a Vernier. Furthermore, in both the control and schizophrenia groups, individuals with higher IAPF showed reduced masking effects, even when the SOA of 150 ms exceeded the alpha cycle. These findings challenge the notion that IAPF is exclusively related to temporal resolution and visual processing within a single alpha cycle. We discuss alternative mechanisms by which IAPF determines visual performance.
摘要 最近的研究表明,个体α峰频率(IAPF)反映了视觉处理的时间分辨率:与 IAPF 较低的个体相比,IAPF 较高的个体可以在更短的时间间隔内分离刺激。然而,这些证据主要来自于针对短间隔的研究,刺激起始不同步(SOA)很少超过一个α周期(如约 100 毫秒)。在这里,我们研究了 IAPF 与视觉后向遮蔽(VBM)表现之间的关系,这使我们能够测试 IAPF 对比起α周期更长 SOA 的影响。我们对一组健康对照组(79 人)和精神分裂症患者(121 人)(他们通常表现出较低的 IAPF)进行了测试,测试条件包括单独显示一个游标、在两个 SOAs(30 毫秒和 150 毫秒)处显示一个游标和一个遮罩,或仅显示一个遮罩。我们的结果表明,IAPF 可以预测在所有显示 Vernier 的条件下的 VBM 表现。此外,在对照组和精神分裂症组中,IAPF 较高的个体表现出较低的掩蔽效应,即使当 150 毫秒的 SOA 超过α周期时也是如此。这些发现质疑了 IAPF 只与单个α周期内的时间分辨率和视觉处理有关的观点。我们讨论了 IAPF 决定视觉表现的其他机制。
{"title":"Alpha peak frequency affects visual performance beyond temporal resolution","authors":"Maëlan Q. Menétrey, M. Roinishvili, E. Chkonia, Michael H. Herzog, David Pascucci","doi":"10.1162/imag_a_00107","DOIUrl":"https://doi.org/10.1162/imag_a_00107","url":null,"abstract":"Abstract Recent work suggests that the individual alpha peak frequency (IAPF) reflects the temporal resolution of visual processing: individuals with higher IAPF can segregate stimuli at shorter intervals compared to those with lower IAPF. However, this evidence mainly comes from studies focusing on short intervals, with stimulus onset asynchronies (SOA) rarely extending beyond a single alpha cycle (e.g., ~100 ms). Here, we investigated the relationship between IAPF and performance in visual backward masking (VBM), which allowed us to test the effects of IAPF for longer SOAs than an alpha cycle. A group of healthy controls (N = 79) and schizophrenia patients (N = 121), who generally exhibit lower IAPF, were tested in conditions with a Vernier shown alone, a Vernier followed by a mask at two SOAs (30 and 150 ms), or only a mask. Our results show that IAPF can predict VBM performance in all conditions with a Vernier. Furthermore, in both the control and schizophrenia groups, individuals with higher IAPF showed reduced masking effects, even when the SOA of 150 ms exceeded the alpha cycle. These findings challenge the notion that IAPF is exclusively related to temporal resolution and visual processing within a single alpha cycle. We discuss alternative mechanisms by which IAPF determines visual performance.","PeriodicalId":507939,"journal":{"name":"Imaging Neuroscience","volume":"16 22","pages":"1-12"},"PeriodicalIF":0.0,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140277357","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
EiDA: A lossless approach for dynamic functional connectivity; application to fMRI data of a model of ageing EiDA:动态功能连接的无损方法;应用于老龄化模型的 fMRI 数据
Pub Date : 2024-03-01 DOI: 10.1162/imag_a_00113
Giuseppe de Alteriis, Eilidh MacNicol, Fran Hancock, Alessandro Ciaramella, Diana Cash, P. Expert, Federico E. Turkheimer
Abstract Dynamic Functional Connectivity (dFC) is the study of the dynamic patterns of interaction that characterise brain function. Numerous numerical methods are available to compute and analyse dFC from high-dimensional data. In fMRI, a number of them rely on the computation of the instantaneous Phase Alignment (iPA) matrix (also known as instantaneous Phase Locking). Their limitations are the high computational cost and the concomitant need to introduce approximations with ensuing information loss. Here, we introduce the analytical decomposition of the iPA. This has two advantages. Firstly, we achieve an up to 1000-fold reduction in computing time without information loss. Secondly, we can formally introduce two alternative approaches to the analysis of the resulting time-varying instantaneous connectivity patterns, Discrete and Continuous EiDA (Eigenvector Dynamic Analysis), and a related set of metrics to quantify the total amount of instantaneous connectivity, drawn from dynamical systems and information theory. We applied EiDA to a dataset from 48 rats that underwent functional magnetic resonance imaging (fMRI) at four stages during a longitudinal study of ageing. Using EiDA, we found that the metrics we introduce provided robust markers of ageing with decreases in total connectivity and metastability, and an increase in informational complexity over the life span. This suggests that ageing reduces the available functional repertoire that is postulated to support cognitive functions and overt behaviours, slows down the exploration of this reduced repertoire, and decreases the coherence of its structure. In summary, EiDA is a method to extract lossless connectivity information that requires significantly less computational time, and provides robust and analytically principled metrics for brain dynamics. These metrics are interpretable and promising for studies on neurodevelopmental and neurodegenerative disorders.
摘要 动态功能连接(dFC)是对大脑功能的动态交互模式的研究。有许多数值方法可用于计算和分析高维数据中的 dFC。在 fMRI 中,许多方法都依赖于计算瞬时相位对齐(iPA)矩阵(也称为瞬时相位锁定)。其局限性在于计算成本高,同时需要引入近似值,从而造成信息损失。在这里,我们介绍 iPA 的分析分解。这有两个优点。首先,我们在不损失信息的情况下将计算时间减少了 1000 倍。其次,我们可以正式引入两种方法来分析由此产生的时变瞬时连接模式,即离散和连续 EiDA(特征向量动态分析),以及从动态系统和信息论中提取的量化瞬时连接总量的相关指标集。我们将 EiDA 应用于 48 只大鼠的数据集,这些大鼠在老化纵向研究的四个阶段接受了功能磁共振成像(fMRI)。通过使用 EiDA,我们发现我们引入的度量指标提供了稳健的老化标记,总连通性和易变性下降,而信息复杂性随着寿命的延长而增加。这表明,衰老减少了用于支持认知功能和公开行为的可用功能库,减缓了对这一减少的功能库的探索,并降低了其结构的一致性。总之,EiDA 是一种提取无损连接信息的方法,它所需的计算时间大大减少,并能为大脑动态提供稳健的分析原理度量。这些指标具有可解释性,有望用于神经发育和神经退行性疾病的研究。
{"title":"EiDA: A lossless approach for dynamic functional connectivity; application to fMRI data of a model of ageing","authors":"Giuseppe de Alteriis, Eilidh MacNicol, Fran Hancock, Alessandro Ciaramella, Diana Cash, P. Expert, Federico E. Turkheimer","doi":"10.1162/imag_a_00113","DOIUrl":"https://doi.org/10.1162/imag_a_00113","url":null,"abstract":"Abstract Dynamic Functional Connectivity (dFC) is the study of the dynamic patterns of interaction that characterise brain function. Numerous numerical methods are available to compute and analyse dFC from high-dimensional data. In fMRI, a number of them rely on the computation of the instantaneous Phase Alignment (iPA) matrix (also known as instantaneous Phase Locking). Their limitations are the high computational cost and the concomitant need to introduce approximations with ensuing information loss. Here, we introduce the analytical decomposition of the iPA. This has two advantages. Firstly, we achieve an up to 1000-fold reduction in computing time without information loss. Secondly, we can formally introduce two alternative approaches to the analysis of the resulting time-varying instantaneous connectivity patterns, Discrete and Continuous EiDA (Eigenvector Dynamic Analysis), and a related set of metrics to quantify the total amount of instantaneous connectivity, drawn from dynamical systems and information theory. We applied EiDA to a dataset from 48 rats that underwent functional magnetic resonance imaging (fMRI) at four stages during a longitudinal study of ageing. Using EiDA, we found that the metrics we introduce provided robust markers of ageing with decreases in total connectivity and metastability, and an increase in informational complexity over the life span. This suggests that ageing reduces the available functional repertoire that is postulated to support cognitive functions and overt behaviours, slows down the exploration of this reduced repertoire, and decreases the coherence of its structure. In summary, EiDA is a method to extract lossless connectivity information that requires significantly less computational time, and provides robust and analytically principled metrics for brain dynamics. These metrics are interpretable and promising for studies on neurodevelopmental and neurodegenerative disorders.","PeriodicalId":507939,"journal":{"name":"Imaging Neuroscience","volume":"100 ","pages":"1-22"},"PeriodicalIF":0.0,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140276191","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Imaging Neuroscience
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1