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Preservation of Genetic Diversity and Selection over a Century in a Coral Reef Fish (Taeniamia zosterophora) in the Philippines. 菲律宾带状带绦虫(Taeniamia zosterophora)一个世纪以来遗传多样性的保存和选择。
IF 2.7 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-11 DOI: 10.1086/738468
Kyra S Fitz, Rene A Abesamis, Jemelyn Grace P Baldisimo, Abner A Bucol, René D Clark, Eric Garcia, Ivan R Lopez, Sharon F Magnuson, Marial J Malabag, Richard N Muallil, Lynne R Parenti, Brendan R Reid, Mudjekeewis D Santos, Christopher E Bird, Kent E Carpenter, Malin L Pinsky

AbstractEvaluating the evolutionary impacts of anthropogenic activity on populations is key to understanding species resiliency and to designing effective conservation strategies. Sequencing DNA from historical specimens provides the opportunity to establish a historical baseline and empirically assess changes in genetic diversity, changes in effective population size, and selection over time. Here, we sequenced historical and contemporary samples of the cardinalfish Taeniamia zosterophora collected in 1908 and in 2021-2022 across two sites with differing human impact in the Philippines. At both sites, genetic diversity increased over time, with contemporary samples having significantly higher Watterson's θ than historical samples. This diversity increase was primarily attributable to positive selection on low-frequency alleles such that they increased toward intermediate frequencies through time. For the putatively neutral fraction of the genome, in contrast, there was a slight but significant decline in Watterson's θ at both low and high human impact sites, suggesting that drift strengthened and effective population sizes declined through time. There was more evidence for selection and greater loss of neutral diversity at the site with higher human impact. Our results provide empirical evidence for the surprising preservation of genetic diversity through the action of natural selection in the face of anthropogenic impacts.

评估人类活动对种群的进化影响是了解物种恢复力和设计有效保护策略的关键。从历史标本中测序DNA提供了建立历史基线的机会,并经验性地评估遗传多样性的变化、有效种群大小的变化和随时间的选择。在这里,我们对1908年和2021-2022年在菲律宾两个不同人类影响地点收集的带状带绦虫(Taeniamia zosterophora)的历史和当代样本进行了测序。在这两个地点,遗传多样性随着时间的推移而增加,当代样本的沃特森θ明显高于历史样本。这种多样性的增加主要归因于低频等位基因的正选择,随着时间的推移,它们向中频方向增加。相比之下,对于假定的中性部分基因组,Watterson θ在低和高人类影响地点都有轻微但显著的下降,这表明漂移加强了,有效种群规模随着时间的推移而下降。在人类活动影响较大的地点,有更多的证据表明自然选择和中性多样性的损失更大。我们的研究结果为遗传多样性在面对人为影响时通过自然选择的作用而得到惊人的保存提供了经验证据。
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引用次数: 0
Rensch's Rule Is Not Supported by a Mammals-Wide Analysis. Rensch法则并没有得到哺乳动物分析的支持。
IF 2.7 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-03 DOI: 10.1086/738469
Kaia J Tombak, Severine B S W Hex

AbstractRensch's rule posits that sexual size dimorphism increases with overall body size among animal species with larger males and that it decreases with body size among species with larger females. The rule, originally based on patterns observed in a limited dataset rather than theory, has attracted much attention in the sexual selection literature. However, evidence for the rule has been equivocal. We test Rensch's rule with a recently published dataset on sexual size dimorphism in mammals using linear regressions with phylogenetic controls. We find that neither male-biased nor female-biased dimorphic species conform to Rensch's rule across mammals. When the analysis is restricted to within-family comparisons, as Rensch originally intended, the rule applies only to three of the 21 mammalian groups tested. We find very limited support for the "rule" in mammals and suggest that it is unlikely to be the general phenomenon that Rensch proposed.

【摘要】trensch法则认为,雄性体型较大的动物的雌雄体型二态性随着体型的增大而增大,雌性体型较大的动物的雌雄体型二态性随着体型的增大而减小。这一规则最初是基于在有限的数据集中观察到的模式,而不是理论,在性选择文献中引起了很多关注。然而,支持这一规则的证据并不明确。我们用最近发表的关于哺乳动物性别大小二态性的数据集测试了Rensch的规则,使用线性回归和系统发育控制。我们发现雄性偏向和雌性偏向的二态物种在哺乳动物中都不符合Rensch规则。当分析仅限于家庭内部比较时,正如Rensch最初打算的那样,该规则仅适用于21个哺乳动物群体中的3个。我们在哺乳动物身上发现的对这一“规律”的支持非常有限,并认为它不太可能是Rensch提出的普遍现象。
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引用次数: 0
Good Colonizers Diversify Faster. 好的殖民者多样化更快。
IF 2.7 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-07 DOI: 10.1086/738413
Søren Faurby, Lars Werdelin, Alex Antonelli

AbstractVariation in colonization ability (comprising the dispersal and successful establishment of lineages in new regions) and its connection to species diversification may be one of the major reasons why clades vary widely in standing diversity. Diversity variation driven by colonization ability can be generated under two scenarios. Under a neutral model, high colonization ability enables some clades to colonize unoccupied areas and over time diversify into more species. Under a nonneutral model, some competitively superior clades are able to rapidly diversify into already occupied niches, both on continents they already occupy and on continents they are invading. Because entire lineages occasionally become extinct, including those that have colonized other landmasses, it can be difficult to distinguish between these models based on extant species. Here, we test these two alternatives using a species-level phylogeny of all extant and extinct species of the mammalian order Carnivora and related extinct groups. We find that species that colonize new continents leave more descendant species than noncolonizers and that colonizing species belong to clades that were diversifying faster than noncolonizers at the time of colonization. Our results suggest that variation in diversification may be partly driven by nonneutral processes with variable competitive ability between lineages. Our study highlights the importance of including extinct species in phylogenies when trying to understand evolutionary and biogeographic patterns.

摘要定殖能力的变化(包括在新区域的扩散和成功建立世系)及其与物种多样化的关系可能是导致进化枝在立地多样性上存在广泛差异的主要原因之一。由殖民化能力驱动的多样性变异可以在两种情况下产生。在中性模型下,高殖民化能力使一些进化枝能够殖民无人居住的地区,并随着时间的推移分化成更多的物种。在非中性模式下,一些具有竞争力的高级进化枝能够迅速向已经被占领的生态位多样化,无论是在它们已经占领的大陆上还是在它们正在入侵的大陆上。因为整个谱系偶尔会灭绝,包括那些在其他大陆上定居的谱系,所以很难区分基于现存物种的这些模型。在这里,我们使用所有现存和灭绝的哺乳动物目食肉目和相关的灭绝类群的物种水平的系统发育来测试这两种选择。我们发现,殖民新大陆的物种比非殖民物种留下了更多的后代物种,而殖民物种属于在殖民时期比非殖民物种多样化更快的分支。我们的研究结果表明,多样性的变化可能在一定程度上是由谱系之间具有可变竞争能力的非中性过程驱动的。我们的研究强调了在试图理解进化和生物地理模式时,将灭绝物种纳入系统发育的重要性。
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引用次数: 0
Phenological Shifts in Plants and Pollinators over a Century Disrupt Interaction Persistence. 一个世纪以来植物和传粉者的物候变化破坏了相互作用的持久性。
IF 2.7 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-04 DOI: 10.1086/738351
Leana Zoller, Diego P Vázquez, Julian Resasco

AbstractMutualistic interactions between plants and pollinators play an important role in supporting biodiversity and ecosystem stability. However, these interactions are increasingly threatened by climate change, which can alter the phenology of species and cause temporal mismatches between interacting partners. Leveraging historical and contemporary datasets collected more than a century apart, we investigated phenological shifts in plants and pollinators and the impact of changes in temporal overlap of the interaction partners on the persistence of their interactions. We found that the onset of flowering and insect activity generally started earlier and has lasted longer in the present. We also found that greater temporal overlap of plant and pollinator species predicted a higher probability of persistence of their interaction between time periods. Our results document phenological shifts over a century and emphasize the importance of maintaining phenological matching for the persistence of plant-pollinator interactions. This illustrates the value of historical datasets for understanding long-term ecological dynamics in the face of accelerating environmental change.

摘要植物与传粉者之间的相互作用在维持生物多样性和生态系统稳定中起着重要作用。然而,这些相互作用日益受到气候变化的威胁,气候变化可以改变物种的物候,并导致相互作用伙伴之间的时间不匹配。利用相隔一个多世纪的历史和当代数据集,我们研究了植物和传粉媒介的物候变化,以及相互作用伙伴时间重叠变化对其相互作用持久性的影响。我们发现,开花和昆虫活动的开始普遍较早,持续时间较长。我们还发现,植物和传粉者物种的时间重叠更大,预示着它们在不同时期之间相互作用的持久性更高的可能性。我们的研究结果记录了一个多世纪的物候变化,并强调了维持植物与传粉者相互作用的物候匹配的重要性。这说明了在面对加速的环境变化时,历史数据集对于理解长期生态动态的价值。
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引用次数: 0
Consequences of Deforestation on Functional Community Structure Reverse at High Elevations. 森林砍伐对高海拔地区功能群落结构逆转的影响
IF 2.7 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-14 DOI: 10.1086/738326
Gavia Lertzman-Lepofsky, Luke O Frishkoff, D Luke Mahler

AbstractFunctional diversity is expected to decrease following land conversion. Empirically, however, the consequences of such changes are highly variable. One possible explanation is that the magnitude and direction of functional diversity change depend on how agricultural land conversion interacts with the original determinants of community assembly (e.g., temperature and elevation gradients). We compared the functional structure of 50 Anolis lizard communities on the island of Hispaniola in both forested and deforested habitats along an elevation gradient, as elevation often determines community composition. We used morphological measurements of body size, limb and tail length, and toepad width to capture ecomorphological aspects of functional diversity. These traits are strongly linked to habitat use, which has been shown to be the primary axis of niche partitioning in anoles. We found that deforestation had little effect on functional (morphological) richness at low elevations but increased functional richness and evenness at high elevations, where natural communities are depauperate owing to thermal constraints. Simultaneously, deforestation reduced spatial turnover and eliminated morphologically peripheral species. These results suggest that how land conversion affects communities depends on whether it relaxes or reinforces a community's dominant environmental filters: at high elevations, as deforestation increases daytime temperatures, the filters that typically shape these communities are relaxed, allowing them to functionally resemble low-elevation communities. While this enriches high-elevation communities, it also removes morphologically unique species and homogenizes diversity across elevations. Our results highlight that how land conversion reorganizes the functional structure of a community depends on environmental context.

摘要土地非农化将导致功能多样性下降。然而,从经验上看,这种变化的后果是高度可变的。一种可能的解释是,功能多样性变化的幅度和方向取决于农业用地转换如何与群落聚集的原始决定因素(例如,温度和海拔梯度)相互作用。我们沿着海拔梯度比较了伊斯帕尼奥拉岛上50个有森林和毁林栖息地的蜥蜴群落的功能结构,因为海拔通常决定了群落的组成。我们使用身体大小、肢体和尾巴长度以及脚趾宽度的形态学测量来捕捉功能多样性的生态形态学方面。这些特征与生境利用密切相关,生境利用已被证明是变色蜥蜴生态位划分的主轴。我们发现,在低海拔地区,森林砍伐对功能(形态)丰富度的影响很小,但在高海拔地区,由于热约束,自然群落的功能丰富度和均匀度增加。同时,森林砍伐减少了空间周转,消除了形态上边缘的物种。这些结果表明,土地转换如何影响社区取决于它是否放松或加强了社区的主要环境过滤器:在高海拔地区,随着森林砍伐增加了白天的温度,通常塑造这些社区的过滤器被放松,使它们在功能上类似于低海拔社区。虽然这丰富了高海拔的群落,但它也消除了形态上独特的物种,并使不同海拔的多样性同质化。我们的研究结果强调,土地转换如何重组社区的功能结构取决于环境背景。
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引用次数: 0
Positive Association between Female-Biased Sexual Size Dimorphism and Male-Skewed Operational Sex Ratio in Anurans. 雌性偏倚的性别大小二型性与雄性偏倚的正常性别比呈正相关。
IF 2.7 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-11 DOI: 10.1086/738328
Yuhan Yuan, Yulin Zhou, Yiming Wu, Shaobin Li, Hong Wu, Yanbo Sun, Ying Jiang, Wenbo Liao, Stefan Lüpold

AbstractSexual size dimorphism (varying body sizes between males and females) and the operational sex ratio (ratio of sexually active males to receptive females) are key demographic traits influenced by complex selective pressures. Two hypotheses explain their relationship: the mating competition hypothesis posits that male-biased sexual size dimorphism intensifies with increasingly male-skewed adult sex ratios, while the mating opportunity hypothesis proposes that female-biased sexual size dimorphism escalates with greater male-biased adult sex ratios. We tested these hypotheses across 101 Chinese anuran species. Our results support the mating opportunity hypothesis, with enhanced female-biased sexual size dimorphism at more male-skewed operational sex ratios, particularly in monogamous species. We further explored the role of ecological factors and life history traits in shaping sexual size dimorphism and operational sex ratio. We found predation pressure to covary negatively with the male bias in operational sex ratios, while temperature variation, likely reflecting seasonal differences, negatively influenced both sexual size dimorphism and operational sex ratio. Our findings highlight the interplay between sexual selection, ecology, and life history in driving the evolution of sexual size dimorphism and operational sex ratio in anurans. Understanding these mechanisms is crucial for predicting how species may respond to future environmental changes.

摘要性别大小二态性(雄性和雌性之间的体型差异)和有效性别比(性活跃的雄性与接受性的雌性的比例)是受复杂选择压力影响的关键人口统计学特征。有两种假说解释了它们之间的关系:交配竞争假说认为,雄性偏向性体型二态性随着成年性别比例的增加而加剧,而交配机会假说认为,雌性偏向性体型二态性随着成年性别比例的增加而加剧。我们在101个中国无尾猿物种中测试了这些假设。我们的研究结果支持了交配机会假说,即在更偏向雄性的操作性别比中,尤其是在一夫一妻制物种中,雌性偏向的性别大小二态性增强。我们进一步探讨了生态因素和生活史特征在两性大小二态性和有效性别比形成中的作用。我们发现,捕食压力与雄性偏向在有效性别比中呈负相关,而温度变化可能反映了季节差异,对性别大小二态性和有效性别比都有负相关影响。我们的研究结果强调了性选择、生态和生活史之间的相互作用,在推动无尾目动物性别大小二态性和有效性别比的进化过程中。了解这些机制对于预测物种如何应对未来的环境变化至关重要。
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引用次数: 0
Intraspecific Reaction Norm Variation Controls the Eco-Evolutionary Consequences of Environmental Change. 种内反应规范变异控制环境变化的生态进化后果。
IF 2.7 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-03 DOI: 10.1086/738412
Daniel J Wieczynski, Matilde M Giglietti, Nicholas Sortisio, Ze-Yi Han, Yaning Yuan, Masayuki Onishi, Maria-Veronica Ciocanel, Jean P Gibert

AbstractAs environmental change accelerates globally, understanding concurrent organismal, species, and community responses is increasingly vital. Here, we examine these collective responses by incorporating genotype-specific thermal reaction norms into an eco-evolutionary predator-prey model, allowing us to track simultaneous phenotypic, ecological, and evolutionary responses to environmental change within ecological communities. We show that the reaction norms expressed by genotypes within a population determine how a community switches between different eco-evolutionary outcomes with changes in temperature. We identify how different components of phenotypic variation in thermal reaction norms-environmental (E), additive environmental and genetic (E+G), and gene-by-environment interactions (G×E)-influence eco-evolutionary dynamics and outcomes as temperature changes. Our findings underscore how complex eco-evolutionary responses to environmental change ultimately emerge from variation in reaction norms among genotypes, offering new mechanistic insights into environmental impacts on adaptation, the maintenance of phenotypic and genetic variation, and ecological stability, which is crucial for understanding and predicting eco-evolutionary effects of rapid environmental change in the future.

摘要随着全球环境变化的加速,了解生物、物种和群落的同步响应变得越来越重要。在这里,我们通过将基因型特异性热反应规范纳入生态进化捕食者-猎物模型来研究这些集体反应,使我们能够在生态群落中跟踪对环境变化的同时表型、生态和进化反应。研究表明,种群内基因型表达的反应规范决定了群落如何随着温度的变化在不同的生态进化结果之间切换。我们确定了热反应规范中表型变异的不同组成部分-环境(E),环境和遗传(E+G),以及基因与环境的相互作用(G×E)-如何随着温度变化影响生态进化动力学和结果。我们的研究结果强调了复杂的生态进化对环境变化的响应最终是如何从基因型之间的反应规范变化中产生的,为环境对适应、表型和遗传变异的维持以及生态稳定性的影响提供了新的机制见解,这对于理解和预测未来快速环境变化的生态进化效应至关重要。
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引用次数: 0
Functional Resurveys and Models Reveal the Interplay of Plasticity and Evolution of Pierid Butterflies in Response to Recent Climate Change. 功能调查和模型揭示了蝴蝶对近期气候变化的可塑性和进化的相互作用。
IF 2.7 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-03 DOI: 10.1086/738432
Lauren B Buckley, Joel G Kingsolver

AbstractThe extent of contemporary evolution, which is mediated by interactions with plasticity, will be an important determinant of biological responses to climate change. We synthesize two functional resurvey projects that, coupled with mechanistic models, evaluate the interplay of plasticity and evolution of pierid butterfly larval (thermal sensitivity of feeding) and adult (wing melanization) traits over recent decades. We characterize thermal environments over the resurvey periods, which we interface with developmental and (historical, current, and hypothetical) thermal sensitivity traits to examine the implications of evolutionary changes. We find that the evolution of photoperiod-cued plasticity of wing melanization in California Colias is consistent with avoiding thermal stress during warming springs. Plasticity has not evolved for Colorado Colias populations, which have experienced stronger increases in climate means relative to extremes in recent decades. Evolution in Colorado Colias larvae has improved tolerance to warm extremes, whereas evolution in California Colias larvae has broadened thermal sensitivity, consistent with capitalizing on expanded seasonal thermal opportunity. Our models predict that Washington Pieris larvae have experienced shifts in the direction of selection to increase performance at warm temperatures. The research highlights the importance of evaluating changes in climate change exposure and sensitivity to understand interacting organismal responses.

摘要当代进化的程度是生物对气候变化反应的重要决定因素,而进化的程度是由生物与可塑性的相互作用介导的。我们综合了两个功能调查项目,结合机制模型,评估了近几十年来幼虫(摄食热敏性)和成虫(翅膀黑化)特征的可塑性和进化的相互作用。我们在重新调查期间对热环境进行了表征,并将其与发育和(历史的、当前的和假设的)热敏性特征相结合,以检查进化变化的含义。我们发现加利福尼亚Colias翅膀黑化的光周期可塑性的进化与在暖春期间避免热应力是一致的。科罗拉多Colias种群的可塑性尚未进化,近几十年来,相对于极端气候,它们经历了更强的气候变化。科罗拉多Colias幼虫的进化提高了对极端温暖的耐受性,而加州Colias幼虫的进化扩大了对热的敏感性,这与利用扩大的季节性热机会是一致的。我们的模型预测,华盛顿Pieris幼虫在温暖的温度下经历了选择方向的转变,以提高性能。该研究强调了评估气候变化暴露和敏感性变化对理解相互作用的生物体反应的重要性。
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引用次数: 0
The Contributions of Microbial Interactions to Abrupt Ecosystem Changes during the Late Quaternary. 微生物相互作用对晚第四纪生态系统突变的贡献
IF 2.7 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-13 DOI: 10.1086/738433
Lucas P P Braga, Yucheng Wang, Zihao Huang, Eske Willerslev, Andrew J Tanentzap

AbstractAbrupt ecosystem shifts during the Late Quaternary coincided with major climatic changes and intensified human activities, but the precise causes of these shifts remain debated. Here, building on previous hypotheses and work, we propose a new hypothesis that both plant beneficial and antagonistic soil microorganisms were the proximate drivers of Late Quaternary change. We synthesized evidence from paleoecological studies and contemporary ecosystems to understand how microbes and their interactions with plants shift ecosystem function. Because relevant paleoecological data are nonexistent, we reanalyzed a contemporary survey from grasslands and woodlands across Europe to test the general role of microbial diversity versus climate in controlling ecosystem function. Our models found that the richness of different microbial groups, including Proteobacteria, mycorrhizas, and plant fungal pathogens, were more strongly associated with the magnitude of direct effects on net primary productivity than temperature and precipitation. The richness of most of these groups was also influenced by climate, supporting our hypothesis that climate change may have indirectly caused past ecosystem shifts by changing microbial composition and function. We end by highlighting the potential of environmental DNA to reconstruct the biota and conditions of past ecosystems. Ultimately, improving our understanding of how microbes drove past ecosystem shifts may improve our ability to respond to future environmental changes.

摘要晚第四纪生态系统的突变与气候变化和人类活动的加剧同时发生,但这些变化的确切原因仍存在争议。在此,基于前人的假设和工作,我们提出了一个新的假设,即植物有益和拮抗土壤微生物都是晚第四纪变化的近因驱动因素。我们综合了古生态学研究和当代生态系统的证据,以了解微生物及其与植物的相互作用如何改变生态系统功能。由于相关的古生态数据不存在,我们重新分析了欧洲草原和林地的当代调查,以测试微生物多样性与气候在控制生态系统功能中的一般作用。我们的模型发现,与温度和降水相比,不同微生物群(包括变形菌、菌根和植物真菌病原体)的丰富度对净初级生产力的直接影响程度更强。大多数这些类群的丰富度也受到气候的影响,这支持了我们的假设,即气候变化可能通过改变微生物组成和功能间接导致了过去生态系统的变化。最后,我们强调了环境DNA在重建过去生态系统的生物群和条件方面的潜力。最终,提高我们对微生物如何驱动过去生态系统变化的理解,可能会提高我们应对未来环境变化的能力。
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引用次数: 0
The Study of Mutualism, Past, Present, and Future. 互惠主义的研究,过去,现在和未来。
IF 2.7 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-05 DOI: 10.1086/738330
Judith L Bronstein

AbstractAfter a fitful start, the conceptual study of mutualism (mutually beneficial interspecific interactions) is now flourishing. In 1994, I reviewed the status of the field as reflected in the peer-reviewed literature; I also laid out directions for future research. Here, I look back on that assessment and offer an updated perspective on our understanding of mutualism. Most of the open questions I identified now have significant literatures of their own. New questions have sprung from each of these, and methodological innovations have made it more possible than ever before to obtain answers. I identify one astonishing gap from 1994: the absence of attention, either in journals or in my own synthesis, to the fate of mutualisms in a changing world. I offer a brief assessment of the now-massive literature on this topic. Finally, I suggest some directions in which the field as a whole might profitably move in the future.

摘要在断断续续的开始之后,互惠主义(种间互利的相互作用)的概念研究正在蓬勃发展。1994年,我回顾了同行评议文献中反映的该领域的现状;我也为未来的研究指明了方向。在这里,我回顾一下这一评估,并就我们对互惠主义的理解提供一个新的视角。我现在发现的大多数开放性问题都有自己的重要文献。每一个问题都产生了新的问题,方法上的创新使得获得答案比以往任何时候都更有可能。自1994年以来,我发现了一个令人惊讶的差距:无论是在期刊上还是在我自己的综述中,都缺乏对不断变化的世界中互惠关系命运的关注。我对目前关于这个主题的大量文献做一个简要的评估。最后,我提出了一些方向,在这个领域作为一个整体可能在未来有利可图的移动。
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引用次数: 0
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American Naturalist
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