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Advances in exosome analysis. 外泌体分析的进展。
2区 医学 Q1 Chemistry Pub Date : 2023-01-01 DOI: 10.1016/bs.acc.2022.09.002
Arnau Pallares-Rusiñol, Mireia Bernuz, Silio Lima Moura, Carolina Fernández-Senac, Rosanna Rossi, Mercè Martí, María Isabel Pividori

There is growing demand for novel biomarkers that detect early stage disease as well as monitor clinical management and therapeutic strategies. Exosome analysis could provide the next advance in attaining that goal. Exosomes are membrane encapsulated biologic nanometric-sized particles of endocytic origin which are released by all cell types. Unfortunately, exosomes are exceptionally challenging to characterize with current technologies. Exosomes are between 30 and 200nm in diameter, a size that makes them out of the sensitivity range to most cell-oriented sorting or analysis platforms, i.e., traditional flow cytometers. The most common methods for targeting exosomes to date typically involve purification followed by the characterization and the specific determination of their cargo. The whole procedure is time consuming, requiring thus skilled personnel as well as laboratory facilities and benchtop instrumentation. The most relevant methodology for exosome isolation, characterization and quantification is addressed in this chapter, including the most up-to-date approaches to explore the potential usefulness of exosomes as biomarkers in liquid biopsies and in advanced nanomedicine.

人们对新型生物标志物的需求日益增长,这些生物标志物可以检测早期疾病,并监测临床管理和治疗策略。外泌体分析可以为实现这一目标提供下一步的进展。外泌体是膜包裹的生物纳米大小的内吞起源的颗粒,由所有类型的细胞释放。不幸的是,用目前的技术来表征外泌体是非常具有挑战性的。外泌体的直径在30到200nm之间,这个尺寸使它们超出了大多数面向细胞的分选或分析平台(即传统流式细胞仪)的灵敏度范围。迄今为止,针对外泌体的最常见方法通常包括纯化,然后进行表征和具体确定其货物。整个过程是耗时的,因此需要熟练的人员以及实验室设施和台式仪器。本章讨论了外泌体分离、表征和定量的最相关方法,包括探索外泌体作为生物标志物在液体活检和先进纳米医学中的潜在用途的最新方法。
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引用次数: 2
Preface. 前言。
2区 医学 Q1 Chemistry Pub Date : 2023-01-01 DOI: 10.1016/S0065-2423(23)00008-2
Gregory S Makowski
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引用次数: 0
Preface. 前言。
2区 医学 Q1 Chemistry Pub Date : 2023-01-01 DOI: 10.1016/S0065-2423(23)00022-7
Gregory S Makowski
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引用次数: 0
Fluid biomarkers in Alzheimer's disease. 阿尔茨海默病的液体生物标志物。
2区 医学 Q1 Chemistry Pub Date : 2023-01-01 DOI: 10.1016/bs.acc.2022.09.006
Joel Simrén, Anders Elmgren, Kaj Blennow, Henrik Zetterberg

Alzheimer's disease (AD) characterization has progressed from being indexed using clinical symptomatology followed by neuropathological examination at autopsy to in vivo signatures using cerebrospinal fluid (CSF) biomarkers and positron emission tomography. The core AD biomarkers reflect amyloid-β plaques (A), tau pathology (T) and neurodegeneration (N), following the ATN schedule, and are now being introduced into clinical routine practice. This is an important development, as disease-modifying treatments are now emerging. Further, there are now reproducible data on CSF biomarkers which reflect synaptic pathology, neuroinflammation and common co-pathologies. In addition, the development of ultrasensitive techniques has enabled the core CSF biomarkers of AD pathophysiology to be translated to blood (e.g., phosphorylated tau, amyloid-β and neurofilament light). In this chapter, we review where we stand with both core and novel CSF biomarkers, as well as the explosion of data on blood biomarkers. Also, we discuss potential applications in research aiming to better understand the disease, as well as possible use in routine clinical practice and therapeutic trials.

阿尔茨海默病(AD)的特征已经从使用临床症状学和尸检时的神经病理学检查来索引到使用脑脊液(CSF)生物标志物和正电子发射断层扫描的体内特征。核心AD生物标志物反映淀粉样蛋白-β斑块(A)、tau病理(T)和神经变性(N),遵循ATN计划,目前正被引入临床常规实践。这是一个重要的进展,因为现在正在出现改善疾病的治疗方法。此外,现在有脑脊液生物标志物的可重复数据,反映突触病理,神经炎症和常见的共病理。此外,超灵敏技术的发展使阿尔茨海默病病理生理学的核心脑脊液生物标志物能够被翻译到血液中(例如,磷酸化的tau,淀粉样蛋白-β和神经丝光)。在本章中,我们回顾了我们在核心和新型脑脊液生物标志物方面的立场,以及血液生物标志物数据的爆炸。此外,我们还讨论了在研究中的潜在应用,旨在更好地了解疾病,以及在常规临床实践和治疗试验中的可能应用。
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引用次数: 2
Evolving markers in amyotrophic lateral sclerosis. 肌萎缩性侧索硬化症的进化标志物。
2区 医学 Q1 Chemistry Pub Date : 2023-01-01 DOI: 10.1016/bs.acc.2023.02.002
Xu Chen, Lu Zhou, Can Cui, Jiangwei Sun

Amyotrophic lateral sclerosis (ALS) is a relatively rare but fatal neurodegenerative disease with the progressive loss of both upper and lower motor neurons. Although electromyography, imaging and multi-omics technologies have suggested numerous functional, structural, circulating and microbiota markers for ALS, no clinically validated markers have, as yet, been identified. Here we summarize the advances to characterize markers underlying ALS pathophysiology as well as their potential use in diagnosis, prognosis and therapy.

肌萎缩性侧索硬化症(ALS)是一种相对罕见但致命的神经退行性疾病,伴有上下运动神经元的进行性丧失。尽管肌电图、成像和多组学技术已经提示了许多ALS的功能、结构、循环和微生物群标记,但尚未发现临床验证的标记。在此,我们总结了表征ALS病理生理的标志物及其在诊断、预后和治疗中的潜在应用的进展。
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引用次数: 0
Heterogeneity in major depressive disorder: The need for biomarker-based personalized treatments. 重度抑郁症的异质性:基于生物标志物的个性化治疗的需要。
2区 医学 Q1 Chemistry Pub Date : 2023-01-01 DOI: 10.1016/bs.acc.2022.09.001
Shayam Suseelan, Graziano Pinna

Major Depressive Disorder (MDD) or depression is a pathological mental condition affecting millions of people worldwide. Identification of objective biological markers of depression can provide for a better diagnostic and intervention criteria; ultimately aiding to reduce its socioeconomic health burden. This review provides a comprehensive insight into the major biomarker candidates that have been implicated in depression neurobiology. The key biomarker categories are covered across all the "omics" levels. At the epigenomic level, DNA-methylation, non-coding RNA and histone-modifications have been discussed in relation to depression. The proteomics system shows great promise with inflammatory markers as well as growth factors and neurobiological alterations within the endocannabinoid system. Characteristic lipids implicated in depression together with the endocrine system are reviewed under the metabolomics section. The chapter also examines the novel biomarkers for depression that have been proposed by studies in the microbiome. Depression affects individuals differentially and explicit biomarkers identified by robust research criteria may pave the way for better diagnosis, intervention, treatment, and prediction of treatment response.

重度抑郁障碍(MDD)或抑郁症是一种影响全世界数百万人的病理性精神状况。确定抑郁症的客观生物学标志物可以提供更好的诊断和干预标准;最终帮助减轻其社会经济健康负担。这篇综述提供了对抑郁症神经生物学中涉及的主要生物标志物候选人的全面见解。关键的生物标志物类别涵盖了所有“组学”水平。在表观基因组水平上,dna甲基化、非编码RNA和组蛋白修饰与抑郁症的关系已被讨论。蛋白质组学系统在内源性大麻素系统内的炎症标记物、生长因子和神经生物学改变方面显示出很大的前景。在代谢组学部分下回顾了与内分泌系统有关的抑郁症的特征脂质。本章还研究了微生物组研究中提出的抑郁症的新生物标志物。抑郁症对个体的影响是不同的,通过强有力的研究标准确定的明确的生物标志物可能为更好的诊断、干预、治疗和治疗反应预测铺平道路。
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引用次数: 7
Biosensors for saliva biomarkers. 用于唾液生物标志物的生物传感器。
2区 医学 Q1 Chemistry Pub Date : 2023-01-01 DOI: 10.1016/bs.acc.2022.11.001
Elif Burcu Aydın, Muhammet Aydın, Mustafa Kemal Sezgintürk

The analysis of salivary biomarkers has gained interest and is advantageous for simple, safe, and non-invasive testing in diagnosis as well as treatment. This chapter explores the importance of saliva biomarkers and summarizes recent advances in biosensor fabrication. The identification of diagnostic, prognostic and therapeutic markers in this matrix enables more rapid and frequent testing when combined with the use of biosensor technology. Challenges and future goals are highlighted and examined.

唾液生物标志物的分析已经引起人们的兴趣,并且有利于简单、安全、无创的诊断和治疗检测。本章探讨了唾液生物标志物的重要性,并总结了生物传感器制造的最新进展。当结合使用生物传感器技术时,该矩阵中诊断、预后和治疗标记物的识别可以实现更快速、更频繁的检测。挑战和未来的目标是突出和审查。
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引用次数: 0
Advances in TB testing. 结核病检测的进展。
2区 医学 Q1 Chemistry Pub Date : 2023-01-01 DOI: 10.1016/bs.acc.2023.03.003
Jayson V Pagaduan, Ghaith Altawallbeh

Globally, tuberculosis (TB) was the leading cause of death from a single infectious agent until the coronavirus (COVID-19) pandemic. In 2020, an estimated 10 million people fell ill with TB and a total of 1.5 million people died from the disease. About one-quarter of the global population, almost two billion people, is estimated to be latently infected with Mycobacterium tuberculosis (MTB). Although latent TB infection (LTBI) is asymptomatic and noncontagious, about 5-10% of LTBI patients have a lifetime risk of progression to active TB. The diagnosis and treatment of active cases are extremely vital for TB control programs. However, achieving the End TB goal of 2035 without the ability to identify and treat the pool of latently infected individuals will be a big challenge. To do so, improved technology to provide more accurate diagnostic tools and accessibility are crucial. Therefore, this chapter covers the current WHO-endorsed tests and advances in diagnostic and screening tests for active and latent TB.

在全球范围内,在冠状病毒(COVID-19)大流行之前,结核病(TB)是单一传染性病原体导致死亡的主要原因。2020年,估计有1000万人罹患结核病,共有150万人死于该病。据估计,全球约有四分之一的人口,即近20亿人处于结核分枝杆菌潜伏感染状态。尽管潜伏性结核感染(LTBI)无症状且非传染性,但约5-10%的LTBI患者有发展为活动性结核的终生风险。活动性病例的诊断和治疗对结核病控制规划极为重要。然而,如果没有能力识别和治疗潜在感染者,实现2035年终结结核病的目标将是一个巨大的挑战。为此,改进技术以提供更准确的诊断工具和可及性至关重要。因此,本章涵盖了目前世卫组织认可的检测方法以及活动性和潜伏性结核病诊断和筛查方法方面的进展。
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引用次数: 3
Translational proteomics and phosphoproteomics: Tissue to extracellular vesicles. 翻译蛋白质组学和磷酸化蛋白质组学:从组织到细胞外囊泡。
2区 医学 Q1 Chemistry Pub Date : 2023-01-01 DOI: 10.1016/bs.acc.2022.09.003
Xiaofeng Wu, Anton B Iliuk, W Andy Tao

We are currently experiencing a rapidly developing era in terms of translational and clinical medical sciences. The relatively mature state of nucleic acid examination has significantly improved our understanding of disease mechanism and therapeutic potential of personalized treatment, but misses a large portion of phenotypic disease information. Proteins, in particular phosphorylation events that regulates many cellular functions, could provide real-time information for disease onset, progression and treatment efficacy. The technical advances in liquid chromatography and mass spectrometry have realized large-scale and unbiased proteome and phosphoproteome analyses with disease relevant samples such as tissues. However, tissue biopsy still has multiple shortcomings, such as invasiveness of sample collection, potential health risk for patients, difficulty in protein preservation and extreme heterogeneity. Recently, extracellular vesicles (EVs) have offered a great promise as a unique source of protein biomarkers for non-invasive liquid biopsy. Membranous EVs provide stable preservation of internal proteins and especially labile phosphoproteins, which is essential for effective routine biomarker detection. To aid efficient EV proteomic and phosphoproteomic analyses, recent developments showcase clinically-friendly EV techniques, facilitating diagnostic and therapeutic applications. Ultimately, we envision that with streamlined sample preparation from tissues and EVs proteomics and phosphoproteomics analysis will become routine in clinical settings.

我们目前正在经历一个快速发展的时代,在转化和临床医学方面。核酸检测相对成熟的状态显著提高了我们对疾病机制的认识和个性化治疗的治疗潜力,但缺失了很大一部分表型疾病信息。蛋白质,特别是调节许多细胞功能的磷酸化事件,可以为疾病的发生、进展和治疗效果提供实时信息。液相色谱和质谱技术的进步已经实现了对疾病相关样品(如组织)进行大规模、无偏的蛋白质组和磷蛋白质组分析。然而,组织活检仍然存在许多缺点,如样本采集的侵入性、对患者的潜在健康风险、蛋白质保存困难以及异质性极大。最近,细胞外囊泡(EVs)作为一种独特的蛋白质生物标志物来源,在非侵入性液体活检中具有很大的前景。膜性ev能够稳定地保存内部蛋白质,尤其是不稳定的磷蛋白,这对于有效的常规生物标志物检测至关重要。为了帮助高效的EV蛋白质组学和磷蛋白质组学分析,最近的发展展示了临床友好的EV技术,促进了诊断和治疗应用。最终,我们设想通过组织和ev的简化样品制备,蛋白质组学和磷酸化蛋白质组学分析将成为临床常规。
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引用次数: 1
Biochemistry and pathophysiology of the Transient Potential Receptor Vanilloid 6 (TRPV6) calcium channel. 瞬时电位受体香草样蛋白6 (TRPV6)钙通道的生物化学和病理生理。
2区 医学 Q1 Chemistry Pub Date : 2023-01-01 DOI: 10.1016/bs.acc.2022.11.002
Valerie Walker, Geerten W Vuister

TRPV6 is a Transient Receptor Potential Vanilloid (TRPV) cation channel with high selectivity for Ca2+ ions. First identified in 1999 in a search for the gene which mediates intestinal Ca2+ absorption, its far more extensive repertoire as a guardian of intracellular Ca2+ has since become apparent. Studies on TRPV6-deficient mice demonstrated additional important roles in placental Ca2+ transport, fetal bone development and male fertility. The first reports of inherited deficiency in newborn babies appeared in 2018, revealing its physiological importance in humans. There is currently strong evidence that TRPV6 also contributes to the pathogenesis of some common cancers. The recently reported association of TRPV6 deficiency with non-alcoholic chronic pancreatitis suggests a role in normal pancreatic function. Over time and with greater awareness of TRPV6, other disease-associations are likely to emerge. Powerful analytical tools have provided invaluable insights into the structure and operation of TRPV6. Its roles in Ca2+ signaling and carcinogenesis, and the use of channel inhibitors in cancer treatment are being intensively investigated. This review first briefly describes the biochemistry and physiology of the channel, and analytical methods used to investigate these. The focus subsequently shifts to the clinical disorders associated with abnormal expression and the underlying pathophysiology. The aims of this review are to increase awareness of this channel, and to draw together findings from a wide range of sources which may help to formulate new ideas for further studies.

TRPV6是一种瞬时受体电位香草蛋白(TRPV)阳离子通道,对Ca2+离子具有高选择性。1999年,在寻找介导肠道Ca2+吸收的基因时,首次发现了它,此后,它作为细胞内Ca2+的守护者的更广泛的功能已经变得明显。对trpv6缺陷小鼠的研究表明,trpv6在胎盘Ca2+运输、胎儿骨骼发育和男性生育能力中具有重要作用。2018年首次报道了新生儿遗传缺陷,揭示了其在人类生理上的重要性。目前有强有力的证据表明,TRPV6也参与了一些常见癌症的发病机制。最近报道的TRPV6缺乏与非酒精性慢性胰腺炎的关联提示其在正常胰腺功能中的作用。随着时间的推移和对TRPV6认识的提高,可能会出现其他疾病关联。强大的分析工具为TRPV6的结构和运作提供了宝贵的见解。它在Ca2+信号传导和致癌中的作用,以及通道抑制剂在癌症治疗中的应用正在深入研究中。本文首先简要介绍了通道的生物化学和生理学,以及用于研究这些通道的分析方法。焦点随后转移到与异常表达相关的临床疾病和潜在的病理生理。本次审查的目的是提高对这一渠道的认识,并从广泛的来源收集可能有助于为进一步研究制定新思路的发现。
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引用次数: 2
期刊
Advances in Clinical Chemistry
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