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Four Unique Genetic Variants in Three Genes Account for 62.7% of Early-Onset Severe Retinal Dystrophy in Chile: Diagnostic and Therapeutic Consequences 三个基因中的四个独特遗传变异占智利早发严重视网膜营养不良症的 62.7%:诊断和治疗后果
Pub Date : 2024-06-03 DOI: 10.3390/ijms25116151
Rene Moya, Clémentine Angée, S. Hanein, Fabienne Jabot-Hanin, J. Kaplan, I. Perrault, J. Rozet, L. Fares Taie
Leber congenital amaurosis (LCA)/early-onset severe retinal dystrophy (EOSRD) stand as primary causes of incurable childhood blindness. This study investigates the clinical and molecular architecture of syndromic and non-syndromic LCA/EOSRD within a Chilean cohort (67 patients/60 families). Leveraging panel sequencing, 95.5% detection was achieved, revealing 17 genes and 126 variants (32 unique). CRB1, LCA5, and RDH12 dominated (71.9%), with CRB1 being the most prevalent (43.8%). Notably, four unique variants (LCA5 p.Glu415*, CRB1 p.Ser1049Aspfs*40 and p.Cys948Tyr, RDH12 p.Leu99Ile) constituted 62.7% of all disease alleles, indicating their importance for targeted analysis in Chilean patients. This study underscores a high degree of inbreeding in Chilean families affected by pediatric retinal blindness, resulting in a limited mutation repertoire. Furthermore, it complements and reinforces earlier reports, indicating the involvement of ADAM9 and RP1 as uncommon causes of LCA/EOSRD. These data hold significant value for patient and family counseling, pharmaceutical industry endeavors in personalized medicine, and future enrolment in gene therapy-based treatments, particularly with ongoing trials (LCA5) or advancing preclinical developments (CRB1 and RDH12).
Leber 先天性无视力症(LCA)/早发性严重视网膜营养不良症(EOSRD)是导致儿童失明的主要原因。本研究调查了智利队列(67 名患者/60 个家庭)中综合征和非综合征 LCA/EOSRD 的临床和分子结构。利用面板测序技术,检测率达到 95.5%,发现了 17 个基因和 126 个变体(32 个唯一变体)。CRB1、LCA5 和 RDH12 占主导地位(71.9%),其中 CRB1 的发病率最高(43.8%)。值得注意的是,四个独特变体(LCA5 p.Glu415*、CRB1 p.Ser1049Aspfs*40和p.Cys948Tyr、RDH12 p.Leu99Ile)占所有疾病等位基因的62.7%,这表明它们对智利患者进行针对性分析的重要性。这项研究强调,智利小儿视网膜盲症患者家族近亲繁殖程度很高,导致突变基因库有限。此外,它还补充并加强了之前的报道,表明 ADAM9 和 RP1 是导致 LCA/EOSRD 的不常见原因。这些数据对患者和家属咨询、制药业在个性化医疗方面的努力以及未来参与基于基因疗法的治疗具有重要价值,尤其是正在进行的试验(LCA5)或正在推进的临床前开发(CRB1 和 RDH12)。
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引用次数: 0
Characterization of High and Low IFNG-Expressing Subgroups in Atopic Dermatitis 特应性皮炎 IFNG 高表达亚群和低表达亚群的特征
Pub Date : 2024-06-03 DOI: 10.3390/ijms25116158
S. Wasserer, M. Jargosch, K. E. Mayer, Jessica Eigemann, Theresa Raunegger, Görkem Aydin, S. Eyerich, T. Biedermann, K. Eyerich, Felix Lauffer
Atopic dermatitis (AD) is one of the most common chronic inflammatory skin diseases, with an increasing number of targeted therapies available. While biologics to treat AD exclusively target the key cytokines of type 2 immunity, Janus kinase inhibitors target a broad variety of cytokines, including IFN-γ. To better stratify patients for optimal treatment outcomes, the identification and characterization of subgroups, especially with regard to their IFNG expression, is of great relevance, as the role of IFNG in AD has not yet been fully clarified. This study aims to define AD subgroups based on their lesional IFNG expression and to characterize them based on their gene expression, T cell secretome and clinical attributes. RNA from the lesional and non-lesional biopsies of 48 AD patients was analyzed by RNA sequencing. Based on IFNG gene expression and the release of IFN-γ by lesional T cells, this cohort was categorized into three IFNG groups (high, medium, and low) using unsupervised clustering. The low IFNG group showed features of extrinsic AD with a higher prevalence of atopic comorbidities and impaired epidermal lipid synthesis. In contrast, patients in the high IFNG group had a higher average age and an activation of additional pro-inflammatory pathways. On the cellular level, higher amounts of M1 macrophages and natural killer cell signaling were detected in the high IFNG group compared to the low IFNG group by a deconvolution algorithm. However, both groups shared a common dupilumab response gene signature, indicating that type 2 immunity is the dominant immune shift in both subgroups. In summary, high and low IFNG subgroups correspond to intrinsic and extrinsic AD classifications and might be considered in the future for evaluating therapeutic efficacy or non-responders.
特应性皮炎(AD)是最常见的慢性炎症性皮肤病之一,目前有越来越多的靶向疗法可供选择。治疗特应性皮炎的生物制剂只针对 2 型免疫的关键细胞因子,而 Janus 激酶抑制剂则针对包括 IFN-γ 在内的多种细胞因子。由于IFNG在AD中的作用尚未完全明确,为了更好地对患者进行分层以获得最佳治疗效果,亚组的识别和特征描述(尤其是IFNG的表达)具有重要意义。本研究旨在根据病变 IFNG 的表达界定 AD 亚组,并根据基因表达、T 细胞分泌组和临床特征对亚组进行特征描述。研究人员通过 RNA 测序分析了 48 例 AD 患者病变和非病变活检组织的 RNA。根据病变T细胞的IFNG基因表达和IFN-γ的释放情况,采用无监督聚类方法将这批患者分为三个IFNG组(高、中、低)。低IFNG组显示了外源性AD的特征,特应性合并症和表皮脂质合成受损的发病率较高。相比之下,高IFNG组患者的平均年龄较高,并激活了其他促炎途径。在细胞水平上,通过去卷积算法,高IFNG组比低IFNG组检测到更多的M1巨噬细胞和自然杀伤细胞信号。不过,两组都有一个共同的杜匹单抗反应基因特征,表明在两个亚组中,2型免疫是主要的免疫转变。总之,高IFNG亚组和低IFNG亚组对应于AD的内在和外在分类,将来可用于评估疗效或无应答者。
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引用次数: 0
Anti-Obesity Properties of Blackberries Fermented with L. plantarum JBMI F5 via Suppression of Adipogenesis Signaling Mechanisms 用植物乳杆菌 JBMI F5 发酵的黑莓通过抑制脂肪生成信号机制抗肥胖的特性
Pub Date : 2024-06-03 DOI: 10.3390/ijms25116164
Jae Young Park, Ha-Rim Kim, Seung-Hyeon Lee, Sang-Wang Lee, H. Sin, T. Lim, Seon-Young Kim, Mi Hee Park
Blackberries (Rubus fruticosus), which are known to include a variety of bioactive substances, have been extensively studied for their antioxidant properties. Blackberries possess multiple health beneficial effects, including anti-inflammation, anti-atherosclerosis, anti-tumor and immunomodulatory activity. However, the potential biological effects and precise molecular mechanisms of the fermented extracts remain largely unexplored. In this research, we demonstrate the effect of blackberries fermented with Lactobacillus for addressing obesity. We investigated the effect of blackberries fermented by Lactobacillus on mice fed a high-fat (60% kcal) diet for 12 weeks. Fermented blackberry administration reduced the body weight and epididymal fat caused by a high-fat diet compared to the obese group. The triglyceride and total cholesterol, which are blood lipid indicators, and the levels of leptin, which is an insulin resistance indicator, were significantly increased in the obese group but were significantly decreased in the fermented blackberries-treated group. Additionally, the expression of adipogenesis marker proteins, such as CEBPα, PPAR-γ and SREBP-1, was significantly increased in the obese group, whereas it was decreased in the fermented blackberries-treated group. These results suggest that fermented blackberries have a protective effect against high-fat-diet-induced obesity by inhibiting adipogenesis and are a potential candidate for the treatment of obesity.
众所周知,黑莓(Rubus fruticosus)含有多种生物活性物质,其抗氧化特性已被广泛研究。黑莓具有多种有益健康的功效,包括抗炎、抗动脉粥样硬化、抗肿瘤和免疫调节活性。然而,发酵提取物的潜在生物效应和精确的分子机制在很大程度上仍未得到探索。在这项研究中,我们证明了用乳酸菌发酵的黑莓对解决肥胖问题的效果。我们研究了乳酸菌发酵的黑莓对以高脂肪(60% 千卡)饮食喂养 12 周的小鼠的影响。与肥胖组相比,服用发酵黑莓可减少高脂饮食引起的体重和附睾脂肪。作为血脂指标的甘油三酯和总胆固醇以及作为胰岛素抵抗指标的瘦素水平在肥胖组明显升高,但在发酵黑莓治疗组则明显降低。此外,CEBPα、PPAR-γ和SREBP-1等脂肪生成标志蛋白的表达在肥胖组明显增加,而在发酵黑莓处理组则有所减少。这些结果表明,发酵黑莓通过抑制脂肪生成对高脂饮食引起的肥胖具有保护作用,是治疗肥胖症的潜在候选药物。
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引用次数: 0
The Latest Advances in Ink-Based Nanogenerators: From Materials to Applications 墨基纳米发电机的最新进展:从材料到应用
Pub Date : 2024-06-03 DOI: 10.3390/ijms25116152
Bingqian Shao, Zhitao Chen, Hengzhe Su, Shuzhe Peng, Mingxin Song
Nanogenerators possess the capability to harvest faint energy from the environment. Among them, thermoelectric (TE), triboelectric, piezoelectric (PE), and moisture-enabled nanogenerators represent promising approaches to micro–nano energy collection. These nanogenerators have seen considerable progress in material optimization and structural design. Printing technology has facilitated the large-scale manufacturing of nanogenerators. Although inks can be compatible with most traditional functional materials, this inevitably leads to a decrease in the electrical performance of the materials, necessitating control over the rheological properties of the inks. Furthermore, printing technology offers increased structural design flexibility. This review provides a comprehensive framework for ink-based nanogenerators, encompassing ink material optimization and device structural design, including improvements in ink performance, control of rheological properties, and efficient energy harvesting structures. Additionally, it highlights ink-based nanogenerators that incorporate textile technology and hybrid energy technologies, reviewing their latest advancements in energy collection and self-powered sensing. The discussion also addresses the main challenges faced and future directions for development.
纳米发电机具有从环境中收集微弱能量的能力。其中,热电(TE)、三电(Triboelectric)、压电(PE)和湿气功能纳米发电机代表了微纳米能量收集的有前途的方法。这些纳米发电机在材料优化和结构设计方面取得了长足的进步。印刷技术促进了纳米发电机的大规模制造。虽然油墨可以与大多数传统功能材料兼容,但这不可避免地会导致材料的电气性能下降,因此有必要控制油墨的流变特性。此外,印刷技术提高了结构设计的灵活性。本综述为基于油墨的纳米发电机提供了一个全面的框架,包括油墨材料优化和器件结构设计,包括油墨性能的改善、流变特性的控制和高效的能量收集结构。此外,报告还重点介绍了结合纺织技术和混合能源技术的墨基纳米发电机,回顾了它们在能量收集和自供电传感方面的最新进展。讨论还涉及面临的主要挑战和未来的发展方向。
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引用次数: 0
Synthesis and Study of Building Blocks with Dibenzo[b,f]oxepine: Potential Microtubule Inhibitors 二苯并[b,f]氧杂卓构件的合成与研究:潜在的微管抑制剂
Pub Date : 2024-06-03 DOI: 10.3390/ijms25116155
Piotr Tobiasz, Filip Borys, Marta Kucharska, Marcin Poterała, Hanna Krawczyk
The synthesis of biphenylmethoxydibenzo[b,f]oxepine or photoswitchable fluorinated dibenzo[b,f]oxepine derivatives with one or three azo bonds, potential microtubule inhibitors, is described. Our studies provide a concise method for constructing derivatives containing the dibenzo[b,f]oxepine skeleton. An analysis of products was run using experimental and theoretical methods. Next, we evaluated the E/Z isomerization of azo-dibenzo[b,f]oxepine derivatives, which could be photochemically controlled using visible-wavelength light.
本文描述了具有一个或三个偶氮键的联苯甲氧基二苯并[b,f]氧杂卓或可光开关的含氟二苯并[b,f]氧杂卓衍生物的合成过程,这些衍生物是潜在的微管抑制剂。我们的研究为构建含有二苯并[b,f]氧杂卓骨架的衍生物提供了一种简洁的方法。我们利用实验和理论方法对产物进行了分析。接下来,我们对偶氮二苯并[b,f]氧杂卓衍生物的 E/Z 异构化进行了评估,该衍生物可使用可见光进行光化学控制。
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引用次数: 0
Sophoridine Counteracts Obesity via Src-Mediated Inhibition of VEGFR Expression and PI3K/AKT Phosphorylation 槐定碱通过 Src 介导的血管内皮生长因子受体表达和 PI3K/AKT 磷酸化抑制作用抵消肥胖症
Pub Date : 2024-01-19 DOI: 10.3390/ijms25021206
Jingchun Sun, Xiaoting Wang, Yulin He, Xuekai Tian, Tiantian Yuan, Gongshe Yang, Taiyong Yu
Sophoridine (SRP) is a natural quinolizidine alkaloid found in many traditional Chinese herbs, though its effect on adipose tissue is unclear. We improved serum lipid levels by administering SRP by gavage in high-fat diet (HFD)-fed C57BL/6 mice. After 11 weeks, SRP supplementation significantly reduced body weight gain and improved glucose homeostasis, while reducing subcutaneous fat and liver weight. SRP also inhibited cell proliferation and differentiation of 3T3-L1 cells. Proteomics analysis revealed that SRP inhibits adipocyte differentiation by interacting with Src, thereby suppressing vascular endothelial growth factor receptor 2 (VEGFR2) expression and PI3K/AKT phosphorylation. This study provides an empirical basis for the treatment of obesity with small molecules.
槐定碱(SRP)是一种天然喹嗪生物碱,存在于许多传统中草药中,但其对脂肪组织的影响尚不清楚。我们通过给高脂饮食(HFD)喂养的 C57BL/6 小鼠灌胃服用 SRP 来改善血清脂质水平。11 周后,补充 SRP 可显著降低体重增加,改善葡萄糖稳态,同时减少皮下脂肪和肝脏重量。SRP 还能抑制 3T3-L1 细胞的增殖和分化。蛋白质组学分析表明,SRP 通过与 Src 相互作用抑制脂肪细胞分化,从而抑制血管内皮生长因子受体 2(VEGFR2)的表达和 PI3K/AKT 磷酸化。这项研究为利用小分子治疗肥胖症提供了经验依据。
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引用次数: 0
Traversing through the Mechanistic Event Analysis in IL-6 and IL-17 Signaling for a New Therapeutic Paradigm in NSCLC IL-6和IL-17信号传导过程中的机制事件分析为NSCLC治疗提供新范例
Pub Date : 2024-01-19 DOI: 10.3390/ijms25021216
Riya Khilwani, Shailza Singh
IL-6 and IL-17 are paradoxical cytokines that progress inflammatory states in chronic diseases, including cancer. In lung cancer, their role has been elucidated to favor cancer development by modulating signaling mechanisms critical to cellular growth. The intrinsic ability of these cytokines to influence macroautophagy is yet another reason to facilitate lung cancer. Here, we employed a systems immunology approach to discover the mechanistic role of these cytokines in cancer development. In a biological system, at later stages, the activation of NFkB stimulates immunosuppressive phenotypes to achieve tolerating effects in a transformed cell. We found that the upregulation of cytokines signaled M2 macrophages to modulate tumor responses through the activation of autophagic intermediates and inflammasome mediators. This caused immune perturbations in the tumor microenvironment, which were associated with cancer inflammation. To address these inflammatory states, we performed triggered event analysis to examine whether overexpressing immune effectors or downregulating immune suppressors may have an effect on cancer reversal. Interestingly, the inhibition of immune regulators opposed the model outcome to an increased immune response. Therefore, IL6-IL17-mediated regulation of lung cancer may address tumor malignancy and potentiate the development of newer therapeutics for NSCLC.
IL-6 和 IL-17 是一种自相矛盾的细胞因子,会使慢性疾病(包括癌症)的炎症状态恶化。在肺癌中,它们的作用已被阐明,通过调节对细胞生长至关重要的信号机制来促进癌症的发展。这些细胞因子影响大自噬的内在能力是促进肺癌的另一个原因。在这里,我们采用了一种系统免疫学方法来发现这些细胞因子在癌症发展中的机理作用。在生物系统中,在后期阶段,NFkB 的激活会刺激免疫抑制表型,以达到对转化细胞的耐受效果。我们发现,细胞因子的上调向 M2 巨噬细胞发出信号,通过激活自噬中间体和炎性体介质来调节肿瘤反应。这引起了肿瘤微环境中的免疫紊乱,与癌症炎症有关。针对这些炎症状态,我们进行了触发事件分析,研究过度表达免疫效应因子或下调免疫抑制因子是否会对癌症逆转产生影响。有趣的是,抑制免疫调节因子与增加免疫反应的模型结果相反。因此,IL6-IL17介导的肺癌调控可能会解决肿瘤恶性程度的问题,并促进NSCLC新疗法的开发。
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引用次数: 0
Exploitation of Autophagy Inducers in the Management of Dementia: A Systematic Review 利用自噬诱导剂治疗痴呆症:系统回顾
Pub Date : 2024-01-19 DOI: 10.3390/ijms25021264
M. Corasaniti, G. Bagetta, P. Nicotera, S. Maione, P. Tonin, F. Guida, D. Scuteri
The social burden of dementia is remarkable since it affects some 57.4 million people all over the world. Impairment of autophagy in age-related diseases, such as dementia, deserves deep investigation for the detection of novel disease-modifying approaches. Several drugs belonging to different classes were suggested to be effective in managing Alzheimer’s disease (AD) by means of autophagy induction. Useful autophagy inducers in AD should be endowed with a direct, measurable effect on autophagy, have a safe tolerability profile, and have the capability to cross the blood–brain barrier, at least with poor penetration. According to the PRISMA 2020 recommendations, we propose here a systematic review to appraise the measurable effectiveness of autophagy inducers in the improvement of cognitive decline and neuropsychiatric symptoms in clinical trials and retrospective studies. The systematic search retrieved 3067 records, 10 of which met the eligibility criteria. The outcomes most influenced by the treatment were cognition and executive functioning, pointing at a role for metformin, resveratrol, masitinib and TPI-287, with an overall tolerable safety profile. Differences in sample power, intervention, patients enrolled, assessment, and measure of outcomes prevents generalization of results. Moreover, the domain of behavioral symptoms was found to be less investigated, thus prompting new prospective studies with homogeneous design. PROSPERO registration: CRD42023393456.
痴呆症的社会负担非常沉重,全世界约有 5740 万人受到痴呆症的影响。自噬功能在老年痴呆症等老年相关疾病中的损害值得深入研究,以发现新的疾病治疗方法。一些不同类别的药物被认为能通过诱导自噬作用有效控制阿尔茨海默病(AD)。对阿兹海默病有用的自噬诱导剂应该对自噬具有直接、可测量的作用,具有安全的耐受性,并能穿过血脑屏障,至少穿透性较差。根据 PRISMA 2020 的建议,我们在此提出一项系统性综述,以评估自噬诱导剂在临床试验和回顾性研究中改善认知功能衰退和神经精神症状的可测量效果。系统性检索共检索到 3067 条记录,其中 10 条符合资格标准。受治疗影响最大的结果是认知能力和执行功能,这表明二甲双胍、白藜芦醇、马西替尼和TPI-287都能发挥作用,而且总体上具有可耐受的安全性。由于样本量、干预措施、入组患者、评估方法和结果测量方法的不同,研究结果难以推广。此外,还发现行为症状领域的研究较少,因此需要采用同质化设计开展新的前瞻性研究。PROSPERO 注册:CRD42023393456。
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引用次数: 0
Stress Physiology and Molecular Biology of Fruit Crops 果树作物的应激生理学和分子生物学
Pub Date : 2024-01-05 DOI: 10.3390/ijms25020706
Lintong Yang, Li-Song Chen
Fruit crops provide various kinds of fruit commodities that are of significant nutritional benefit and economic value to humans [...]
水果作物提供各种水果商品,对人类具有重要的营养价值和经济价值 [...]
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引用次数: 0
The CYP80A and CYP80G Are Involved in the Biosynthesis of Benzylisoquinoline Alkaloids in the Sacred Lotus (Nelumbo nucifera) CYP80A 和 CYP80G 参与圣莲中苄基异喹啉生物碱的生物合成
Pub Date : 2024-01-05 DOI: 10.3390/ijms25020702
Chenyang Hao, Yuetong Yu, Yan Liu, An Liu, Sha Chen
Bisbenzylisoquinoline and aporphine alkaloids are the two main pharmacological compounds in the ancient sacred lotus (Nelumbo nucifera). The biosynthesis of bisbenzylisoquinoline and aporphine alkaloids has attracted extensive attention because bisbenzylisoquinoline alkaloids have been reported as potential therapeutic agents for COVID-19. Our study showed that NnCYP80A can catalyze C-O coupling in both (R)-N-methylcoclaurine and (S)-N-methylcoclaurine to produce bisbenzylisoquinoline alkaloids with three different linkages. In addition, NnCYP80G catalyzed C-C coupling in aporphine alkaloids with extensive substrate selectivity, specifically using (R)-N-methylcoclaurine, (S)-N-methylcoclaurine, coclaurine and reticuline as substrates, but the synthesis of C-ring alkaloids without hydroxyl groups in the lotus remains to be elucidated. The key residues of NnCYP80G were also studied using the 3D structure of the protein predicted using Alphafold 2, and six key amino acids (G39, G69, A211, P288, R425 and C427) were identified. The R425A mutation significantly decreased the catalysis of (R)-N-methylcoclaurine and coclaurine inactivation, which might play important role in the biosynthesis of alkaloids with new configurations.
双苄基异喹啉和卟吩生物碱是古代神莲(Nelumbo nucifera)中的两种主要药效化合物。双苄基异喹啉和卟吩生物碱的生物合成引起了广泛关注,因为有报道称双苄基异喹啉生物碱是 COVID-19 的潜在治疗药物。我们的研究表明,NnCYP80A 可催化 (R)-N-methylcoclaurine 和 (S)-N-methylcoclaurine 中的 C-O 偶联,生成具有三种不同连接方式的双苄基异喹啉生物碱。此外,NnCYP80G催化卟吩生物碱中的C-C偶联具有广泛的底物选择性,特别是以(R)-N-甲基oclaurine、(S)-N-甲基oclaurine、coclaurine和reticuline为底物,但莲子中无羟基的C环生物碱的合成仍有待阐明。研究人员还利用 Alphafold 2 预测的蛋白质三维结构对 NnCYP80G 的关键残基进行了研究,确定了六个关键氨基酸(G39、G69、A211、P288、R425 和 C427)。R425A突变明显降低了对(R)-N-甲基古柯碱的催化和古柯碱的失活,这可能在生物合成新构型生物碱的过程中发挥重要作用。
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引用次数: 0
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