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Integrating computational methods to predict mutagenicity of aromatic azo compounds. 结合计算方法预测芳香偶氮化合物的致突变性。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-10-02 Epub Date: 2017-11-27 DOI: 10.1080/10590501.2017.1391521
Domenico Gadaleta, Nicola Porta, Eleni Vrontaki, Serena Manganelli, Alberto Manganaro, Guido Sello, Masamitsu Honma, Emilio Benfenati

Azo dyes have several industrial uses. However, these azo dyes and their degradation products showed mutagenicity, inducing damage in environmental and human systems. Computational methods are proposed as cheap and rapid alternatives to predict the toxicity of azo dyes. A benchmark dataset of Ames data for 354 azo dyes was employed to develop three classification strategies using knowledge-based methods and docking simulations. Results were compared and integrated with three models from the literature, developing a series of consensus strategies. The good results confirm the usefulness of in silico methods as a support for experimental methods to predict the mutagenicity of azo compounds.

偶氮染料有几种工业用途。然而,这些偶氮染料及其降解产物具有突变性,对环境和人体系统造成损害。计算方法是预测偶氮染料毒性的廉价和快速的替代方法。利用354种偶氮染料的Ames数据基准数据集,利用基于知识的方法和对接模拟,制定了三种分类策略。将结果与文献中的三个模型进行比较和整合,形成一系列共识策略。这些良好的结果证实了计算机方法作为实验方法预测偶氮化合物致突变性的支持的有效性。
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引用次数: 6
Recent trends in common chemical feed and food contaminants in Israel. 以色列常见化学饲料和食品污染物的最新趋势。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-10-02 Epub Date: 2017-11-27 DOI: 10.1080/10590501.2017.1391507
J A Shimshoni, S Barel

In February 2014 a new law was approved by the Israeli parliament, namely the Control of Animal Feed Law. The law intends to regulate the production and marketing of animal feed. In preparation for the law's implementation in 2017, we have assessed the current feed and food safety challenges in Israel in recent years in association with the presence of common undesirable contaminants in various common feed and food commodities. Tight collaboration between regulatory authorities and feed/food industry, enhanced feed and food quality monitoring, transparency of survey results and readily accessible and reliable information for the public about health hazards of chemical contaminants, will guarantee the safety and quality of food and feed.

2014年2月,以色列议会通过了一项新的法律,即《动物饲料控制法》。该法律旨在规范动物饲料的生产和销售。为了准备2017年法律的实施,我们评估了近年来以色列当前的饲料和食品安全挑战,以及各种常见饲料和食品商品中常见的不良污染物的存在。监管当局与饲料/食品工业之间的密切合作、加强饲料和食品质量监测、调查结果的透明度以及公众随时可以获得关于化学污染物对健康危害的可靠信息,将保证食品和饲料的安全和质量。
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引用次数: 4
Effects of chronic alcohol consumption on DNA damage and immune regulation induced by the environmental pollutant dibenzo[a,l]pyrene in oral tissues of mice. 慢性饮酒对环境污染物二苯并[a,l]芘致小鼠口腔组织DNA损伤及免疫调节的影响
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-10-02 Epub Date: 2017-12-04 DOI: 10.1080/10590501.2017.1391514
Kun-Ming Chen, Todd D Schell, John P Richie, Yuan-Wan Sun, Shang-Min Zhang, Ana Calcagnotto, Cesar Aliaga, Krishne Gowda, Shantu Amin, Karam El-Bayoumy

Previously, we showed that oral application of the environmental pollutant dibenzo[a,l]pyrene (DB[a,l]P) induces oral tumors in mice. Thus, in the present investigation we examined the effect of alcohol on DB[a,l]P-induced DNA damage and immune regulation; we showed that alcohol (6.4% v/v in the diet, 35% of Calories) significantly enhanced the levels of (-)-anti-trans-DB[a,l]P-dA while decreased the levels of GSH in the mouse oral tissues. Analysis of RNA expression revealed that DB[a,l]P alone upregulates inflammatory genes while alcohol suppresses several markers of immune surveillance. Collectively, these results suggest that alcohol may enhance oral carcinogenesis induced by DB[a,l]P.

先前,我们发现口服环境污染物二苯并[a,l]芘(DB[a,l]P)可诱导小鼠口腔肿瘤。因此,在本研究中,我们研究了酒精对DB[a,l] p诱导的DNA损伤和免疫调节的影响;我们发现,酒精(饮食中6.4% v/v, 35%卡路里)显著提高(-)-抗反式db [a,l]P-dA水平,同时降低小鼠口腔组织中谷胱甘肽的水平。RNA表达分析显示,DB[a,l]P单独上调炎症基因,而酒精抑制几种免疫监视标志物。综上所述,这些结果表明酒精可能会增强DB诱导的口腔癌发生[a,l]P。
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引用次数: 10
Exploring the activities of ruthenium nanomaterials as reactive oxygen species scavengers. 探讨钌纳米材料作为活性氧清除剂的活性。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-10-02 Epub Date: 2017-12-08 DOI: 10.1080/10590501.2017.1391516
Gao-Juan Cao, Xiumei Jiang, Hui Zhang, Jiwen Zheng, Timothy R Croley, Jun-Jie Yin

Research on noble metal nanoparticles (NPs) able to scavenge reactive oxygen species (ROS) has undergone a tremendous growth recently. However, the interactions between ruthenium nanoparticles (Ru NPs) and ROS have never been systematically explored thus far. This research focused on the decomposition of hydrogen peroxide (H2O2), scavenging of hydroxyl radicals (OH), superoxide radical (O2•-), singlet oxygen (1O2), 2,2'-azino-bis(3-ethylbenzenothiazoline- 6-sulfonic acid ion (ABTS•+), and 1,1-diphenyl-2-picrylhydrazyl radical (DPPH) in the presence of commercial Ru NPs using the electron spin resonance technique. In vitro cell studies demonstrated that Ru NPs have excellent biocompatibility and exert a cytoprotective effect against oxidative stress. These findings may spark fresh enthusiasm for the applications of Ru NPs under relevant physiologically conditions.

近年来,对清除活性氧(ROS)的贵金属纳米颗粒的研究得到了极大的发展。然而,迄今为止,钌纳米颗粒(Ru NPs)与活性氧之间的相互作用尚未被系统地探索过。本研究主要研究了利用电子自旋共振技术在商业钌NPs存在下分解过氧化氢(H2O2)、清除羟基自由基(•OH)、超氧自由基(O2•-)、单重态氧(1O2)、2,2′-氮基-双(3-乙基苯噻唑啉- 6-磺酸离子(ABTS•+)和1,1-二苯基-2-吡啶肼基自由基(•DPPH)。体外细胞研究表明,Ru NPs具有良好的生物相容性,并具有抗氧化应激的细胞保护作用。这些发现可能为Ru NPs在相关生理条件下的应用激发新的热情。
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引用次数: 13
Immunoassay approach for diagnosis of exposure to pyrrolizidine alkaloids. 免疫分析法诊断吡咯利西啶类生物碱暴露。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-07-03 Epub Date: 2017-05-16 DOI: 10.1080/10590501.2017.1328828
Na Li, Fan Zhang, Wei Lian, Huali Wang, Jiang Zheng, Ge Lin

Numerous pyrrolizidine alkaloid (PA) poisoning cases have been documented worldwide. Protein covalent binding with reactive metabolites generated from metabolic activation of PAs to form pyrrole-protein adducts is suggested to be a primary mechanism of PA-induced toxicities. The present study aimed to develop antibodies for diagnosis of PA exposure. Polyclonal antibodies were raised in rabbits and proven to specifically recognize pyrrole-protein adducts regardless of amino acid residues modified by the reactive metabolites of PAs. The developed antibodies were successfully applied to detect pyrrole-protein adducts in blood samples obtained from PA-treated rats and exhibited a potential for the clinical diagnosis of PA exposure.

许多吡咯利西啶生物碱中毒病例已在世界范围内记录在案。蛋白质与PAs代谢激活产生的反应性代谢物的共价结合形成吡咯-蛋白加合物被认为是pa诱导毒性的主要机制。本研究旨在开发诊断PA暴露的抗体。在家兔中培养了多克隆抗体,并被证明能够特异性识别吡咯蛋白加合物,而不管PAs活性代谢物修饰的氨基酸残基如何。所开发的抗体已成功用于检测PA治疗大鼠血液样本中的吡咯蛋白加合物,并显示出PA暴露的临床诊断潜力。
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引用次数: 8
Evaluation of chemical mutagenicity using next generation sequencing: A review. 利用新一代测序技术评价化学致突变性:综述。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-07-03 Epub Date: 2017-05-16 DOI: 10.1080/10590501.2017.1328831
Hua Du, Bohu Pan, Tao Chen

Mutations are heritable changes in the nucleotide sequence of DNA that can lead to many adverse effects. Genotoxicity assays have been used to identify chemical mutagenicity. Recently, next generation sequencing (NGS) has been used for this purpose. In this review, we present the progress in NGS application for assessing mutagenicity of chemicals, including the methods used for detecting the induced mutations, bioinformatics tools for analyzing the sequencing data, and chemicals whose mutagenicity has been evaluated using NGS. Available information suggests that NGS technology has unparalleled advantages for evaluating mutagenicity of chemicals can be applied for the next generation of mutagenicity tests.

突变是DNA核苷酸序列的可遗传变化,可导致许多不利影响。遗传毒性试验已用于确定化学致突变性。最近,下一代测序(NGS)已被用于这一目的。本文综述了NGS在化学物质致突变性评价中的应用进展,包括用于检测诱导突变的方法、用于分析测序数据的生物信息学工具以及利用NGS评价的化学物质的致突变性。现有资料表明,NGS技术在评价化学品致突变性方面具有无可比拟的优势,可应用于下一代致突变性试验。
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引用次数: 17
Formation of iron oxide/Pd hybrid nanostructures with enhanced peroxidase-like activity and catalytic reduction of 4-nitrophenol. 形成具有增强过氧化物酶样活性和催化还原4-硝基苯酚的氧化铁/钯杂化纳米结构。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-07-03 Epub Date: 2017-05-22 DOI: 10.1080/10590501.2017.1328839
Jing Li, Junhui Cai, Huimin Jia, Lixia Zhang, Yan Lei, Weiwei He, Jun-Jie Yin

Iron oxide/Pd hybrid nanostructures with controllable Pd loading from 0.05 to 1.0 (calculated as Pd/Fe molar ratio) have been synthesized by chemical reduction of Pd2+ on iron oxide particles. The combination of iron oxide and Pd exhibits enhanced peroxidase-like activity and catalytic activity toward reduction of 4-nitrophenol. The catalytic enhancements were found to be dependent on the Pd loading amount as well as the synergistic effect between iron oxide and Pd. These results suggest that iron oxide with unique surface chemical state can be an active supporter and suggest an effective way to design superior hybrid nanostructures for catalytic applications.

通过在氧化铁颗粒上化学还原Pd2+,合成了Pd负载在0.05 ~ 1.0(以Pd/Fe摩尔比计算)可控的氧化铁/Pd杂化纳米结构。氧化铁与Pd的结合表现出增强的过氧化物酶样活性和对4-硝基苯酚还原的催化活性。结果表明,氧化铁与钯的协同作用与钯的负荷量有关。这些结果表明,具有独特表面化学状态的氧化铁可以作为活性载体,并为设计优异的杂化纳米结构提供了有效的方法。
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引用次数: 9
A decision tree approach to screen drinking water contaminants for multiroute exposure potential in developing guideline values. 用决策树方法筛选饮用水污染物的多途径暴露潜力,以制定指标值。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-07-03 DOI: 10.1080/10590501.2017.1328844
Kannan Krishnan, Richard Carrier
ABSTRACT The consideration of inhalation and dermal routes of exposures in developing guideline values for drinking water contaminants is important. However, there is no guidance for determining the eligibility of a drinking water contaminant for its multiroute exposure potential. The objective of the present study was to develop a 4-step framework to screen chemicals for their dermal and inhalation exposure potential in the process of developing guideline values. The proposed framework emphasizes the importance of considering basic physicochemical properties prior to detailed assessment of dermal and inhalation routes of exposure to drinking water contaminants in setting guideline values.
在制定饮用水污染物指导值时,考虑吸入途径和皮肤接触途径是很重要的。然而,没有指导方针来确定饮用水污染物的多途径暴露潜力的合格性。本研究的目的是建立一个四步框架,在制定指导值的过程中筛选化学物质的皮肤和吸入暴露潜力。拟议的框架强调了在制定指导值时,在详细评估接触饮用水污染物的皮肤和吸入途径之前考虑基本物理化学性质的重要性。
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引用次数: 0
7-Glutathione-pyrrole and 7-cysteine-pyrrole are potential carcinogenic metabolites of pyrrolizidine alkaloids. 7-谷胱甘肽吡咯和7-半胱氨酸吡咯是吡咯利西啶类生物碱的潜在致癌代谢物。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-04-03 Epub Date: 2017-03-01 DOI: 10.1080/10590501.2017.1298358
Xiaobo He, Qingsu Xia, Peter P Fu

Many pyrrolizidine alkaloids (PAs) are hepatotoxic, genotoxic, and carcinogenic phytochemicals. Metabolism of PAs in vivo generates four (±)-6,7-dihydro-7-hydroxy-1-hydroxymethyl-5H-pyrrolizine (DHP)-DNA adducts that have been proposed to be responsible for PA-induced liver tumor formation in rats. In this present study, we determined that the same set of DHP-DNA adducts was formed upon the incubation of 7-glutathione-DHP and 7-cysteine-DHP with cultured human hepatocarcinoma HepG2 cells. These results suggest that 7-glutathione-DHP and 7-cysteine-DHP are reactive metabolites of PAs that can bind to cellular DNA to form DHP-DNA adducts in HepG2 cells, and can potentially initiate liver tumor formation.

许多吡咯利西啶生物碱(PAs)是肝毒性、遗传毒性和致癌的植物化学物质。PAs在体内代谢产生四种(±)-6,7-二氢-7-羟基-1-羟甲基- 5h -吡咯利嗪(DHP)-DNA加合物,这些加合物被认为是pa诱导大鼠肝脏肿瘤形成的原因。在本研究中,我们发现7-谷胱甘肽- dhp和7-半胱氨酸- dhp与培养的人肝癌HepG2细胞孵育后形成了相同的DHP-DNA加合物。这些结果表明,7-谷胱甘肽- dhp和7-半胱氨酸- dhp是PAs的反应性代谢物,可以结合细胞DNA在HepG2细胞中形成DHP-DNA加合物,并可能引发肝脏肿瘤的形成。
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引用次数: 21
Key challenges for nanotechnology: Standardization of ecotoxicity testing. 纳米技术的主要挑战:生态毒性测试的标准化。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-04-03 Epub Date: 2017-02-22 DOI: 10.1080/10590501.2017.1298361
Cristina Cerrillo, Gotzone Barandika, Amaya Igartua, Olatz Areitioaurtena, Gemma Mendoza

Nanotechnology is expected to contribute to the protection of the environment, but many uncertainties exist regarding the environmental and human implications of manufactured nanomaterials (MNMs). Contradictory results have been reported for their ecotoxicity to aquatic organisms, which constitute one of the most important pathways for their entrance and transfer throughout the food web. The present review is focused on the international strategies that are laying the foundations of the ecotoxicological assessment of MNMs. Specific advice is provided on the preparation of MNM dispersions in the culture media of the organisms, which is considered a key factor to overcome the limitations in the standardization of the test methodologies.

纳米技术有望为环境保护做出贡献,但是关于人造纳米材料(MNMs)对环境和人类的影响存在许多不确定性。它们对水生生物的生态毒性是它们进入并在整个食物网中转移的最重要途径之一,但研究结果却相互矛盾。目前审查的重点是为MNMs生态毒理学评价奠定基础的国际战略。对微生物培养基中MNM分散体的制备提供了具体建议,这被认为是克服测试方法标准化限制的关键因素。
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引用次数: 15
期刊
Journal of Environmental Science and Health Part C-Environmental Carcinogenesis & Ecotoxicology Reviews
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