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Aberrant epigenetic regulation of estrogen and progesterone signaling at the level of endometrial/endometriotic tissue in the pathomechanism of endometriosis. 子宫内膜/子宫内膜异位症组织水平雌激素和孕激素信号的异常表观遗传调控在子宫内膜异位症的病理机制中的作用。
4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1016/bs.vh.2022.11.005
Dariusz Szukiewicz

Endometriosis is a term referring to a condition whereby the endometrial tissue is found outside the uterine cavity. This progressive and debilitating condition affects up to 15% of women of reproductive age. Due to the fact that endometriosis cells may express estrogen receptors (ERα, Erβ, GPER) and progesterone (P4) receptors (PR-A, PR-B), their growth, cyclic proliferation, and breakdown are similar to the processes occurring in the endometrium. The underlying etiology and pathogenesis of endometriosis are still not fully explained. The retrograde transport of viable menstrual endometrial cells with the retained ability to attach within the pelvic cavity, proliferate, differentiate and invade into the surrounding tissue explains the most widely accepted implantation theory. Endometrial stromal cells (EnSCs) with clonogenic potential constitute the most abundant population of cells within endometrium that resemble the properties of mesenchymal stem cells (MSCs). Accordingly, formation of the endometriotic foci in endometriosis may be due to a kind of EnSCs dysfunction. Increasing evidence indicates the underestimated role of epigenetic mechanisms in the pathogenesis of endometriosis. Hormone-mediated epigenetic modifications of the genome in EnSCs or even MSCs were attributed an important role in the etiopathogenesis of endometriosis. The roles of excess estrogen exposure and P4 resistance were also found to be crucial in the development of epigenetic homeostasis failure. Therefore, the aim of this review was to consolidate the current knowledge regarding the epigenetic background of EnSCs and MSCs and the changed properties due to estrogen/P4 imbalances in the context of the etiopathogenesis of endometriosis.

子宫内膜异位症是指子宫内膜组织位于子宫腔外的一种情况。这种进行性和衰弱性疾病影响到多达15%的育龄妇女。由于子宫内膜异位症细胞可表达雌激素受体(ERα、Erβ、GPER)和孕激素受体(PR-A、PR-B),其生长、循环增殖和分解过程与子宫内膜相似。子宫内膜异位症的病因和发病机制尚不完全清楚。有活力的月经期子宫内膜细胞的逆行运输,保留了在盆腔内附着、增殖、分化和侵入周围组织的能力,解释了最被广泛接受的植入理论。具有克隆潜能的子宫内膜基质细胞(EnSCs)是子宫内膜内最丰富的细胞群,具有与间充质干细胞(MSCs)相似的特性。因此,子宫内膜异位症中子宫内膜异位灶的形成可能是由于一种EnSCs功能障碍所致。越来越多的证据表明,表观遗传机制在子宫内膜异位症发病机制中的作用被低估。EnSCs甚至MSCs中激素介导的基因组表观遗传修饰在子宫内膜异位症的发病机制中起着重要作用。过量雌激素暴露和P4抵抗也被发现在表观遗传稳态失败的发展中起着至关重要的作用。因此,本综述的目的是巩固目前关于EnSCs和MSCs的表观遗传背景的知识,以及在子宫内膜异位症发病背景下雌激素/P4失衡导致的特性改变。
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引用次数: 5
The potential role of environmental factors in modulating mitochondrial DNA epigenetic marks. 环境因素在调节线粒体DNA表观遗传标记中的潜在作用。
4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1016/bs.vh.2023.01.011
Brad A Ryva, Zheng Zhou, Jaclyn M Goodrich, Rita S Strakovsky

Many studies implicate mitochondrial dysfunction in the development and progression of numerous chronic diseases. Mitochondria are responsible for most cellular energy production, and unlike other cytoplasmic organelles, mitochondria contain their own genome. Most research to date, through investigating mitochondrial DNA copy number, has focused on larger structural changes or alterations to the entire mitochondrial genome and their role in human disease. Using these methods, mitochondrial dysfunction has been linked to cancers, cardiovascular disease, and metabolic health. However, like the nuclear genome, the mitochondrial genome may experience epigenetic alterations, including DNA methylation that may partially explain some of the health effects of various exposures. Recently, there has been a movement to understand human health and disease within the context of the exposome, which aims to describe and quantify the entirety of all exposures people encounter throughout their lives. These include, among others, environmental pollutants, occupational exposures, heavy metals, and lifestyle and behavioral factors. In this chapter, we summarize the current research on mitochondria and human health, provide an overview of the current knowledge on mitochondrial epigenetics, and describe the experimental and epidemiologic studies that have investigated particular exposures and their relationships with mitochondrial epigenetic modifications. We conclude the chapter with suggestions for future directions in epidemiologic and experimental research that is needed to advance the growing field of mitochondrial epigenetics.

许多研究表明线粒体功能障碍与许多慢性疾病的发生和进展有关。线粒体负责大多数细胞能量的产生,与其他细胞质细胞器不同,线粒体含有自己的基因组。迄今为止,通过研究线粒体DNA拷贝数,大多数研究都集中在整个线粒体基因组的较大结构变化或改变及其在人类疾病中的作用上。利用这些方法,线粒体功能障碍与癌症、心血管疾病和代谢健康有关。然而,像核基因组一样,线粒体基因组可能经历表观遗传改变,包括DNA甲基化,这可能部分解释了各种暴露对健康的一些影响。最近,出现了一种运动,目的是在接触的背景下了解人类健康和疾病,其目的是描述和量化人们一生中遇到的所有接触。这些因素包括环境污染物、职业暴露、重金属、生活方式和行为因素等。在本章中,我们总结了线粒体与人类健康的最新研究,概述了线粒体表观遗传学的最新知识,并描述了研究特定暴露及其与线粒体表观遗传修饰关系的实验和流行病学研究。最后,我们对未来的流行病学和实验研究方向提出了建议,这些方向需要推进线粒体表观遗传学领域的发展。
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引用次数: 0
Mutations at hypothetical binding site 2 in insulin and insulin-like growth factors 1 and 2. 胰岛素和胰岛素样生长因子1和2中假想结合位点2的突变。
4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 Epub Date: 2023-03-01 DOI: 10.1016/bs.vh.2023.01.010
Jiří Jiráček, Irena Selicharová, Lenka Žáková

Elucidating how insulin and the related insulin-like growth factors 1 and 2 (IGF-1 and IGF-2) bind to their cellular receptors (IR and IGF-1R) and how the receptors are activated has been the holy grail for generations of scientists. However, deciphering the 3D structure of tyrosine kinase receptors and their hormone-bound complexes has been complicated by the flexible and dimeric nature of the receptors and the dynamic nature of their interaction with hormones. Therefore, mutagenesis of hormones and kinetic studies first became an important tool for studying receptor interactions. It was suggested that hormones could bind to receptors through two binding sites on the hormone surface called site 1 and site 2. A breakthrough in knowledge came with the solution of cryoelectron microscopy (cryoEM) structures of hormone-receptor complexes. In this chapter, we document in detail the mutagenesis of insulin, IGF-1, and IGF-2 with emphasis on modifications of the hypothetical binding site 2 in the hormones, and we discuss the results of structure-activity studies in light of recent cryoEM structures of hormone complexes with IR and IGF-1R.

阐明胰岛素和相关的胰岛素样生长因子1和2(IGF-1和IGF-2)如何与其细胞受体(IR和IGF-1R)结合,以及受体如何被激活,一直是几代科学家的圣杯。然而,酪氨酸激酶受体及其激素结合复合物的3D结构由于受体的柔性和二聚性以及它们与激素相互作用的动态性质而变得复杂。因此,激素诱变和动力学研究首次成为研究受体相互作用的重要工具。有人认为,激素可以通过激素表面的两个结合位点,即位点1和位点2与受体结合。激素受体复合物的冷冻电镜(cryoEM)结构的解决方案在知识上取得了突破。在本章中,我们详细记录了胰岛素、IGF-1和IGF-2的突变,重点是激素中假想结合位点2的修饰,并根据最近与IR和IGF-1R的激素复合物的冷冻EM结构讨论了结构-活性研究的结果。
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引用次数: 1
A structural perspective of liver X receptors. 肝脏X受体的结构观点。
4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 Epub Date: 2023-02-06 DOI: 10.1016/bs.vh.2023.01.008
Jan-Åke Gustafsson, Xian Chang Li, Ji Ho Suh, Xiaohua Lou

Liver X receptors α and β are members of the nuclear receptor family, which comprise a flexible N-terminal domain, a DNA binding domain, a hinge linker, and a ligand binding domain. Liver X receptors are important regulators of cholesterol and lipid homeostasis by controlling the transcription of numerous genes. Key to their transcriptional role is synergetic interaction among the domains. DNA binding domain binds on DNA; ligand binding domain is a crucial switch to control the transcription activity through conformational change caused by ligand binding. The Liver X receptors form heterodimers with retinoid X receptor and then the liganded heterodimer may recruit other necessary transcription components to form an active transcription complex.

肝X受体α和β是核受体家族的成员,包括柔性N末端结构域、DNA结合结构域、铰链连接体和配体结合结构域。肝X受体通过控制许多基因的转录,是胆固醇和脂质稳态的重要调节因子。它们转录作用的关键是结构域之间的协同作用。DNA结合域与DNA结合;配体结合域是通过配体结合引起的构象变化来控制转录活性的关键开关。肝X受体与类视黄醇X受体形成异二聚体,然后连接化的异二聚物可以募集其他必要的转录成分以形成活性转录复合物。
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引用次数: 0
Crosstalk between epigenetics and tumor promoting androgen signaling in prostate cancer. 前列腺癌中表观遗传学与促肿瘤雄激素信号传导的串扰。
4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1016/bs.vh.2022.11.007
Vipendra Kumar Singh, K M Kainat, Pradeep Kumar Sharma

Prostate cancer (PCa) is one of the major health burdens among all cancer types in men globally. Early diagnosis and efficacious treatment options are highly warranted as far as the incidence of PCa is concerned. Androgen-dependent transcriptional activation of androgen receptor (AR) is central to the prostate tumorigenesis and therefore hormonal ablation therapy remains the first line of treatment for PCa in the clinics. However, the molecular signaling engaged in AR-dependent PCa initiation and progression is infrequent and diverse. Moreover, apart from the genomic changes, non-genomic changes such as epigenetic modifications have also been suggested as critical regulator of PCa development. Among the non-genomic mechanisms, various epigenetic changes such as histones modifications, chromatin methylation and noncoding RNAs regulations etc. play decisive role in the prostate tumorigenesis. Given that epigenetic modifications are reversible using pharmacological modifiers, various promising therapeutic approaches have been designed for the better management of PCa. In this chapter, we discuss the epigenetic control of tumor promoting AR signaling that underlies the mechanism of prostate tumorigenesis and progression. In addition, we have discussed the approaches and opportunities to develop novel epigenetic modifications based therapeutic strategies for targeting PCa including castrate resistant prostate cancer (CRPC).

前列腺癌(PCa)是全球男性所有癌症类型中的主要健康负担之一。就前列腺癌的发病率而言,早期诊断和有效的治疗方案是非常必要的。雄激素受体(AR)的雄激素依赖性转录激活是前列腺肿瘤发生的核心,因此激素消融治疗仍然是临床治疗前列腺癌的一线治疗方法。然而,参与ar依赖性PCa起始和进展的分子信号并不常见且多样。此外,除了基因组变化外,表观遗传修饰等非基因组变化也被认为是PCa发展的关键调节因子。在非基因组机制中,组蛋白修饰、染色质甲基化、非编码rna调控等各种表观遗传变化在前列腺肿瘤发生中起决定性作用。鉴于表观遗传修饰是可逆的使用药理学调节剂,各种有希望的治疗方法已经设计为更好地管理PCa。在本章中,我们讨论了肿瘤促进AR信号的表观遗传控制,这是前列腺肿瘤发生和发展机制的基础。此外,我们还讨论了开发新的基于表观遗传修饰的靶向前列腺癌治疗策略的方法和机会,包括去势抵抗性前列腺癌(CRPC)。
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引用次数: 0
Mechanisms of action of vitamin D in delaying aging and preventing disease by inhibiting oxidative stress. 维生素D通过抑制氧化应激延缓衰老和预防疾病的作用机制。
4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1016/bs.vh.2022.09.004
Dengshun Miao, David Goltzman

Although several recent studies have shown that vitamin D supplementation beneficially decreases oxidative stress parameters, there is no consensus on this subject in humans. Thus the role of vitamin D supplementation has recently become a controversial topic because large intervention studies in humans have not shown significant benefits. These studies have indicated that supplementation with precursor forms of active vitamin D has no effect on all-cause mortality, cannot reduce the fracture risk of the elderly, cannot reduce the incidence of cancer or cardiovascular disease in the elderly, and cannot significantly reduce the incidence risk of diabetes in the elderly. However, a link between several age-related diseases and enhanced oxidative stress has been found in mice with insufficient or deficient 1,25-dihydroxyvitamin D (1,25(OH)2D), the active form of vitamin D, which indicates that reduced active vitamin D accelerates aging and age-related diseases by increasing oxidative stress. Furthermore, supplementation of exogenous 1,25(OH)2D3, or antioxidants, could dramatically postpone aging, prevent osteoporosis and spontaneous tumor development induced by 1,25(OH)2D insufficiency or deficiency, by inhibiting oxidative stress. Mechanistically, the antioxidative effects of 1,25(OH)2D3 are carried out via the vitamin D receptor (VDR) by activation of the Nrf2 oxidative stress response pathway though transcriptional or posttranscriptional activation of Nrf2 or transcriptional upregulation of Sirt1 and Bmi1 expression. Whether discrepancies between studies in humans and in mice reflect the different forms of vitamin D examined remains to be determined.

尽管最近的几项研究表明,补充维生素D有利于降低氧化应激参数,但在人体这一问题上尚无共识。因此,维生素D补充剂的作用最近成为一个有争议的话题,因为对人类进行的大规模干预研究没有显示出显著的益处。这些研究表明,补充活性维生素D前体形式对全因死亡率没有影响,不能降低老年人骨折的风险,不能降低老年人癌症或心血管疾病的发病率,不能显著降低老年人糖尿病的发病率。然而,在维生素D的活性形式1,25-二羟基维生素D (1,25(OH)2D)不足或缺乏的小鼠中发现了几种与年龄相关的疾病与氧化应激增强之间的联系,这表明活性维生素D的减少通过增加氧化应激来加速衰老和与年龄相关的疾病。此外,补充外源性1,25(OH)2D3或抗氧化剂可以通过抑制氧化应激显著延缓衰老,预防由1,25(OH)2D不足或缺乏引起的骨质疏松症和自发肿瘤的发生。从机制上讲,1,25(OH)2D3的抗氧化作用是通过维生素D受体(VDR)通过Nrf2的转录或转录后激活或Sirt1和Bmi1表达的转录上调来激活Nrf2氧化应激反应途径实现的。人类和小鼠研究之间的差异是否反映了所检测的维生素D的不同形式仍有待确定。
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引用次数: 3
Free radicals, antioxidants, nuclear factor-E2-related factor-2 and liver damage. 自由基,抗氧化剂,核因子e2相关因子2和肝损伤。
4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1016/bs.vh.2022.09.006
Erika Ramos-Tovar, Pablo Muriel

The liver performs various biochemical and molecular functions. Its location as a portal to blood arriving from the intestines makes it susceptible to several insults, leading to diverse pathologies, including alcoholic liver disease, viral infections, nonalcoholic steatohepatitis, and hepatocellular carcinoma, which are causes of death worldwide. Illuminating the molecular mechanism underlying hepatic injury will provide targets to develop new therapeutic strategies to fight liver maladies. In this regard, reactive oxygen species (ROS) are well-recognized mediators of liver damage. ROS induce nuclear factor-κB and the nucleotide-binding oligomerization domain (NOD)-like receptor protein 3 inflammasome, which are the main proinflammatory signaling pathways that upregulate several proinflammatory and profibrogenic mediators. Additionally, oxygen-derived free radicals induce hepatic stellate cell activation to produce exacerbated quantities of extracellular matrix proteins, leading to fibrosis, cirrhosis and eventually hepatocellular carcinoma. Exogenous and endogenous antioxidants counteract the harmful effects of ROS, preventing liver necroinflammation and fibrogenesis. Therefore, several researchers have demonstrated that the administration of antioxidants, mainly derived from plants, affords beneficial effects on the liver. Notably, nuclear factor-E2-related factor-2 (Nrf2) is a major factor against oxidative stress in the liver. Increasing evidence has demonstrated that Nrf2 plays an important role in liver necroinflammation and fibrogenesis via the induction of antioxidant response element genes. The use of Nrf2 inducers seems to be an interesting approach to prevent/attenuate hepatic disorders, particularly under conditions where ROS play a causative role.

肝脏执行各种生化和分子功能。作为血液从肠道到达的门户,它的位置使它容易受到几种损害,导致各种病理,包括酒精性肝病、病毒感染、非酒精性脂肪性肝炎和肝细胞癌,这些都是世界范围内死亡的原因。阐明肝损伤的分子机制将为开发新的治疗策略提供靶点,以对抗肝脏疾病。在这方面,活性氧(ROS)是公认的肝损伤介质。ROS诱导核因子-κB和核苷酸结合寡聚域(NOD)样受体蛋白3炎性小体,它们是主要的促炎信号通路,上调几种促炎和促纤维化介质。此外,氧源性自由基诱导肝星状细胞活化,产生大量细胞外基质蛋白,导致纤维化、肝硬化,最终导致肝细胞癌。外源性和内源性抗氧化剂抵消活性氧的有害影响,防止肝脏坏死、炎症和纤维化。因此,一些研究人员已经证明,抗氧化剂的管理,主要来自植物,提供对肝脏有益的影响。值得注意的是,核因子e2相关因子2 (Nrf2)是肝脏中抗氧化应激的主要因子。越来越多的证据表明Nrf2通过诱导抗氧化反应元件基因在肝脏坏死炎症和纤维化中起重要作用。使用Nrf2诱导剂似乎是一种预防/减轻肝脏疾病的有趣方法,特别是在ROS起致病作用的情况下。
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引用次数: 0
About the editor. 关于编辑
4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1016/S0083-6729(23)00037-7
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引用次数: 0
Antioxidants: Structure-activity of plant polyphenolics. 抗氧化剂:植物多酚的结构-活性。
4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1016/bs.vh.2022.10.001
Aluru Rammohan, Grigory V Zyryanov, Yerramathi Babu Bhagath, Kola Manjula

The excessive accumulation of reactive oxygen species (ROS)/free radicals can lead to abnormal oxidation of biomolecules such as proteins, lipids, fats, carbohydrates and nucleic acids in human organisms. Accordingly, endogenous oxidative stress induces the progressive development of various chronic diseases like rheumatoid arthritis, cancers, cardiovascular risks, diabetes, digestive ulcers, hypertension, obesity, neurological disorders, and age-related complications. Therefore, anti-oxidant defense mechanisms are needed to control/prevent the unbalanced molecular oxidative damage. Indeed, the oxidative stress arises from both endogenous and exogenous factors such as smoking, alcohol, medications, air pollution, sunlight, lifestyle disorders, and metabolic processes. Therefore, consumption of fruits, vegetables, grains, beverages, and leafy vegetables rich in antioxidants may inhibit or treat oxidative damage accompanying diseases. From this aspect, dietary foods are rich in various antioxidant metabolites such as flavonoids, vitamin A, C, E, phenolic acids, curcumin, stilbenes, anthocyanins, etc., which promote healthy life and nutritional benefits. Additionally, various studies have also proven that foods rich in antioxidants interact with reactive species to prevent cell damage(s) or therapeutic pathways for diseases. Although, there are various myths about the antioxidant mechanism(s), the optimal dosage of antioxidants can show beneficial pharmacological activities against various molecular oxidation paths.

活性氧(ROS)/自由基的过度积累可导致人体生物体内蛋白质、脂质、脂肪、碳水化合物和核酸等生物分子的异常氧化。因此,内源性氧化应激诱导各种慢性疾病的逐步发展,如类风湿关节炎、癌症、心血管风险、糖尿病、消化溃疡、高血压、肥胖、神经系统疾病和与年龄相关的并发症。因此,需要抗氧化防御机制来控制/防止不平衡的分子氧化损伤。事实上,氧化应激由内源性和外源性因素引起,如吸烟、酒精、药物、空气污染、阳光、生活方式紊乱和代谢过程。因此,食用富含抗氧化剂的水果、蔬菜、谷物、饮料和叶类蔬菜可以抑制或治疗氧化损伤伴随的疾病。从这方面看,膳食食物富含黄酮类化合物、维生素A、C、E、酚酸、姜黄素、芪、花青素等各种抗氧化代谢物,促进健康生活和营养效益。此外,各种研究还证明,富含抗氧化剂的食物与活性物质相互作用,以防止细胞损伤或疾病的治疗途径。虽然,关于抗氧化机制有各种各样的神话,抗氧化剂的最佳剂量可以显示出对各种分子氧化途径有益的药理活性。
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引用次数: 3
The antioxidant glutathione. 抗氧化剂谷胱甘肽。
4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1016/bs.vh.2022.09.002
Diana A Averill-Bates

Reduced glutathione (GSH) is an essential non-enzymatic antioxidant in mammalian cells. GSH can act directly as an antioxidant to protect cells against free radicals and pro-oxidants, and as a cofactor for antioxidant and detoxification enzymes such as glutathione peroxidases, glutathione S-transferases, and glyoxalases. Glutathione peroxidases detoxify peroxides by a reaction that is coupled to GSH oxidation to glutathione disulfide (GSSG). GSSG is converted back to GSH by glutathione reductase and cofactor NADPH. GSH can regenerate vitamin E following detoxification reactions of vitamin E with lipid peroxyl radicals (LOO). GSH is a cofactor for GST during detoxification of electrophilic substances and xenobiotics. Dicarbonyl stress induced by methylglyoxal and glyoxal is alleviated by glyoxalase enzymes and GSH. GSH regulates redox signaling through reversible oxidation of critical protein cysteine residues by S-glutathionylation. GSH is involved in other cellular processes such as protein folding, protecting protein thiols from oxidation and crosslinking, degradation of proteins with disulfide bonds, cell cycle regulation and proliferation, ascorbate metabolism, apoptosis and ferroptosis.

还原性谷胱甘肽(GSH)是哺乳动物细胞中必不可少的非酶抗氧化剂。谷胱甘肽可以直接作为抗氧化剂保护细胞免受自由基和促氧化剂的侵害,并作为抗氧化和解毒酶的辅助因子,如谷胱甘肽过氧化物酶、谷胱甘肽s -转移酶和乙二醛酶。谷胱甘肽过氧化物酶通过与谷胱甘肽氧化成谷胱甘肽二硫(GSSG)的反应来解毒。GSSG通过谷胱甘肽还原酶和辅酶NADPH转化回谷胱甘肽。谷胱甘肽可以在维生素E与脂质过氧自由基(LOO)解毒反应后再生维生素E。谷胱甘肽是GST在亲电物质和异种生物解毒过程中的辅助因子。乙二醛酶和谷胱甘肽可减轻甲乙二醛和乙二醛诱导的二羰基应激。谷胱甘肽通过s -谷胱甘肽化对关键蛋白半胱氨酸残基的可逆氧化调节氧化还原信号。谷胱甘肽还参与其他细胞过程,如蛋白质折叠、保护蛋白质硫醇免受氧化和交联、蛋白质与二硫键的降解、细胞周期调节和增殖、抗坏血酸代谢、细胞凋亡和铁凋亡。
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引用次数: 14
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