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Sequence and Phylogenetic Analysis of the Untranslated Promoter Regions for HLA Class I Genes. HLA I 类基因非翻译启动子区域的序列和系统发育分析。
Pub Date : 2017-03-15 Epub Date: 2017-02-01 DOI: 10.4049/jimmunol.1601679
Veron Ramsuran, Pedro G Hernández-Sanchez, Colm O'hUigin, Gaurav Sharma, Niamh Spence, Danillo G Augusto, Xiaojiang Gao, Christian A García-Sepúlveda, Gurvinder Kaur, Narinder K Mehra, Mary Carrington

Polymorphisms located within the MHC have been linked to many disease outcomes by mechanisms not yet fully understood in most cases. Variants located within untranslated regions of HLA genes are involved in allele-specific expression and may therefore underlie some of these disease associations. We determined sequences extending nearly 2 kb upstream of the transcription start site for 68 alleles from 57 major lineages of classical HLA class I genes. The nucleotide diversity within this promoter segment roughly follows that seen within the coding regions, with HLA-B showing the highest (∼1.9%), followed by HLA-A (∼1.8%), and HLA-C showing the lowest diversity (∼0.9%). Despite its greater diversity, HLA-B mRNA expression levels determined in 178 European Americans do not vary in an allele- or lineage-specific manner, unlike the differential expression levels of HLA-A or HLA-C reported previously. Close proximity of promoter sequences in phylogenetic trees is roughly reflected by similarity of expression pattern for most HLA-A and -C loci. Although promoter sequence divergence might impact promoter activity, we observed no clear link between the phylogenetic structures as represented by pairwise nucleotide differences in the promoter regions with estimated differences in mRNA expression levels for the classical class I loci. Further, no pair of class I loci showed coordinated expression levels, suggesting that distinct mechanisms across loci determine their expression level under nonstimulated conditions. These data serve as a foundation for more in-depth analysis of the functional consequences of promoter region variation within the classical HLA class I loci.

位于 MHC 内的多态性与许多疾病结果有关,其机制在大多数情况下尚未完全明了。位于 HLA 基因非翻译区的变异参与了等位基因的特异性表达,因此可能是其中一些疾病关联的基础。我们测定了来自 57 个主要 HLA I 类基因系的 68 个等位基因的转录起始位点上游近 2 kb 的序列。该启动子片段的核苷酸多样性与编码区的核苷酸多样性大致相同,HLA-B 的多样性最高(1.9%),其次是 HLA-A(1.8%),HLA-C 的多样性最低(0.9%)。尽管HLA-B的多样性较高,但在178名欧洲裔美国人中测定的HLA-B mRNA表达水平并没有等位基因或血统特异性的变化,这与之前报道的HLA-A或HLA-C的不同表达水平不同。大多数 HLA-A 和 -C 基因座表达模式的相似性大致反映了系统发生树中启动子序列的接近性。虽然启动子序列的差异可能会影响启动子的活性,但我们观察到,启动子区域的成对核苷酸差异所代表的系统发生结构与经典 I 类基因位点 mRNA 表达水平的估计差异之间没有明显的联系。此外,没有一对 I 类基因座显示出协调的表达水平,这表明在非刺激条件下,不同基因座的表达水平由不同的机制决定。这些数据为更深入地分析经典 HLA I 类基因座启动子区域变异的功能性后果奠定了基础。
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引用次数: 0
Prevalence of allergen sensitization in 1000 adults in Saskatchewan. 萨斯喀彻温省 1000 名成年人的过敏原致敏率。
Pub Date : 2017-02-08 eCollection Date: 2017-01-01 DOI: 10.1186/s13223-017-0181-1
Stacey D Lok, Beth E Davis, Donald W Cockcroft

Background: The prevalence of sensitization varies geographically based on multiple environmental factors including humidity. The aim of this study was to determine the prevalence of atopy in symptomatic adults. More importantly we aimed to obtain a regional statistic of sensitization to common allergens given Saskatchewan's dry climate.

Methods: One thousand consecutive symptomatic adults were screened for atopy via skin prick test over 10 years (2006-2016) in the Division of Respirology. An atopic screen was performed with twenty common aeroallergens by a single investigator, Dr. D. Cockcroft. A positive test was considered to be a wheal ≥3 mm and markedly positive reactions ≥8 mm were also documented.

Results: The prevalence of atopy by means of a positive skin test (≥3 mm) was 45.5%. The prevalence of one or more markedly positive reactions (≥8 mm) was 29.5% of the total population. The most frequent sensitization was to cat dander (58.2%), followed by mixed grass (32.1%), and birch (26.8%). Dust mite sensitization was 22.4% and mouse 6.2%. A positive epidemiology screen for cat/grass/mite would have incorporated 82.0% (n = 373) of subjects with positive skin tests. Those who failed the cat/grass/mite screen were mainly sensitized to trees (n = 34), molds (n = 22), weeds (n = 7), and animals (n = 8).

Conclusions: There is a high prevalence of cat sensitization in Saskatchewan, much higher than recorded in other centers internationally. This is likely due to a high proportion of cat ownership. The prevalence of mite sensitization is lower than those mentioned at other centres likely due to Saskatchewan's dry climate. The significance of the rate of markedly positive reactions (≥8 mm wheal) when compared to humid areas with higher burden of mite is unknown. There is a low prevalence of roach also likely due to the dry climate and mouse sensitization was low but still identified as a significant indoor allergen. A cat/grass/mite screen may be useful with a 82.0% sensitivity.

背景:过敏症的发病率因湿度等多种环境因素而存在地域差异。本研究的目的是确定有症状成年人的过敏症患病率。更重要的是,鉴于萨斯喀彻温省气候干燥,我们希望获得该地区对常见过敏原过敏的统计数据:方法: Respirology 分部在 10 年内(2006-2016 年)通过皮肤点刺试验对一千名连续有症状的成年人进行了特应性筛查。特应性筛查由一名研究人员 D. Cockcroft 博士使用 20 种常见的空气过敏原进行。检测结果为阳性,即出现≥3毫米的喘息,也有记录显示出现≥8毫米的明显阳性反应:结果:皮试阳性(≥3 毫米)的特应性发生率为 45.5%。一个或多个明显阳性反应(≥8 毫米)的发生率为总人口的 29.5%。最常见的过敏原是猫皮屑(58.2%),其次是杂草(32.1%)和桦树(26.8%)。对尘螨过敏的占 22.4%,对老鼠过敏的占 6.2%。在皮肤测试呈阳性的受试者中,82.0%(n = 373)的受试者在猫/禾本科/螨流行病学筛查中呈阳性。未能通过猫/蛆/螨筛查的受试者主要对树木(34 人)、霉菌(22 人)、杂草(7 人)和动物(8 人)过敏:结论:萨斯喀彻温省猫过敏的发病率很高,远远高于国际上其他中心的记录。这可能是因为养猫的比例较高。螨虫致敏率低于其他中心,这可能是由于萨斯喀彻温省气候干燥的缘故。与螨虫感染率较高的潮湿地区相比,明显阳性反应(≥8 毫米的乳突)率的意义尚不清楚。蟑螂的发病率较低也可能是由于气候干燥,老鼠的致敏率较低,但仍被确定为一种重要的室内过敏原。猫/草/螨筛查可能有用,敏感度为 82.0%。
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引用次数: 0
Tinea pedis and onychomycosis frequency in diabetes mellitus patients and diabetic foot ulcers. A cross sectional - observational study. 糖尿病患者的足癣和甲癣发病率与糖尿病足溃疡。一项横断面观察研究。
IF 2.2 Pub Date : 2016-07-01 DOI: 10.12669/pjms.324.10027
Gamze Akkus, Mehtap Evran, Dilek Gungor, Mehmet Karakas, Murat Sert, Tamer Tetiker

Objective: Impaired cellular immunity and reduced phagocytic function of polymorphonuclear leukocytes facilitate the development of skin fungal and bacterial infections due to uncontrolled hyperglycemia in diabetic patients. In our study, we aimed to assess onychomycosis and/or tinea pedis frequency in diabetic patients, and effects on the development of chronic complications, particularly foot ulcer.

Methods: We included 227 diabetic patients in the study. Forty-three patients had diabetic foot ulcer. We screened and recorded demographic characteristics, HbA1c levels of patients, and presence of complications We examined patients dermatologically, and collected samples by scalpel from skin between toes, and from sole, toe nail, and area surrounding nails from suspected to have fungal infection.

Results: Native positivity between toes was higher in men compared to women (p<0.05). We obtained significant relation between HbA1c elevation and native positivity between toes (p<0.05). Fungal infection between toes, at sole and toe nail significantly increased in patients with diabetic foot ulcer compared to patients without diabetic foot ulcer (p<0.05). Moreover, native positivity in patients with diabetic foot ulcer correlated with presence of fungal infection examination findings (p<0.05).

Conclusion: Fungal infections were more frequently observed in the presence of poor glycemic control and peripheral vascular disease in diabetic patients in compliance with the literature, and the presence of fungal infection may also responsible for the development of foot ulcers.

目的:糖尿病患者的细胞免疫功能受损,多形核白细胞的吞噬功能降低,从而导致皮肤真菌和细菌感染。在我们的研究中,我们旨在评估糖尿病患者中甲癣和/或足癣的发生频率,以及对慢性并发症(尤其是足部溃疡)发生的影响:研究共纳入 227 名糖尿病患者。43名患者患有糖尿病足溃疡。我们筛查并记录了患者的人口统计学特征、HbA1c 水平以及是否存在并发症。我们对患者进行了皮肤科检查,并用手术刀采集了脚趾间皮肤、脚底、趾甲和指甲周围疑似真菌感染区域的样本:结果:与女性相比,男性脚趾间的原生阳性率更高(p):真菌感染在血糖控制不佳和患有外周血管疾病的糖尿病患者中更为常见,这与文献报道一致,真菌感染也可能是导致足部溃疡的原因。
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引用次数: 0
Prologue: relevance of molecular imaging in clinical medicine. 前言:分子影像在临床医学中的相关性。
Pub Date : 2008-08-01 DOI: 10.1038/ncpcardio1237
Zahi A Fayad, Valentin Fuster
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引用次数: 2
Ultrasound molecular imaging of cardiovascular disease. 心血管疾病的超声分子成像。
Pub Date : 2008-08-01 DOI: 10.1038/ncpcardio1246
Flordeliza S Villanueva, William R Wagner

Myocardial contrast echocardiography utilizes intravenously injected gas-filled microspheres as acoustically active red blood cell tracers. During ultrasound imaging, unimpeded microsphere transit through the intramyocardial microcirculation causes transient myocardial opacification, which can be mapped and quantified as myocardial perfusion. Ultrasound molecular imaging utilizes similar acoustically active microspheres, which are modified to bear a receptor-specific ligand on the surface, conferring microsphere binding to a disease-specific endothelial epitope. Because the microspheres adhere to the endothelium, ultrasound imaging reveals a persistent, rather than transient, contrast effect, indicating the presence and location of the molecule of interest in real time. Molecular contrast echocardiography has been developed to detect upregulated leukocyte adhesion molecules during microvascular inflammation, such as occurs in cardiac transplant rejection and ischemia-reperfusion. Principles of microsphere targeting and ultrasound imaging of microvascular epitopes have been extended to larger vessels to image molecular markers of atherosclerosis. This Article summarizes the current status of cardiovascular ultrasound molecular imaging. Experimental proofs of concept will be outlined and the clinical extension of these concepts to the molecular imaging of cardiovascular disease using clinical ultrasound technology will be discussed.

心肌造影超声心动图利用静脉注射充气微球作为声活性红细胞示踪剂。超声成像时,微球在心内微循环中畅通无阻,引起短暂性心肌混浊,可作为心肌灌注进行制图和量化。超声分子成像利用类似的声活性微球,将其修饰为在表面携带受体特异性配体,使微球与疾病特异性内皮表位结合。由于微球粘附在内皮细胞上,超声成像显示出持久而非短暂的对比效应,实时指示感兴趣分子的存在和位置。分子对比超声心动图已经发展到检测微血管炎症过程中白细胞粘附分子的上调,如心脏移植排斥反应和缺血再灌注。微球靶向和微血管表位超声成像的原理已经扩展到更大的血管,以成像动脉粥样硬化的分子标志物。本文综述了心血管超声分子成像的研究现状。实验证明的概念将概述和这些概念的临床扩展到心血管疾病的分子成像使用临床超声技术将讨论。
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引用次数: 50
Imaging left ventricular remodeling: targeting the neurohumoral axis. 左心室重构成像:针对神经体液轴。
Pub Date : 2008-08-01 DOI: 10.1038/ncpcardio1244
Jamshid Shirani, Vasken Dilsizian

Left ventricular remodeling is a key determinant of the clinical course and outcome of systolic heart failure. The myocardial renin-angiotensin system (RAS) has been closely linked to the major maladaptive cellular and molecular changes that accompany left ventricular remodeling. Direct inhibition of various components of the RAS, such as the angiotensin-converting enzyme, angiotensin II type 1 receptor, and aldosterone, has resulted in favorable clinical responses in heart failure. Many questions, however, remain unanswered regarding the timing of initiation, optimum doses, need for simultaneous use of RAS inhibitors, and proper monitoring of RAS blockade. Additionally, significant variation has been noted in individual responses to RAS blockade as a result of genetic differences. Answering these questions requires direct access to the myocardial component of RAS, which is largely independent of its systemic component. Molecular imaging using radiotracers with high affinities for myocardial angiotensin-converting enzyme and angiotensin II type 1 receptors can provide direct access to tissue RAS and thus provide a better understanding of the pathophysiology of left ventricular remodeling in individual patients. This Article briefly reviews the potential for evaluating the tissue expression of angiotensin in heart failure by targeted RAS imaging.

左心室重构是决定收缩期心力衰竭临床过程和结局的关键因素。心肌肾素-血管紧张素系统(RAS)与伴随左心室重构的主要不适应细胞和分子变化密切相关。直接抑制RAS的各种成分,如血管紧张素转换酶、血管紧张素II型1受体和醛固酮,已导致心力衰竭的良好临床反应。然而,关于起始时间、最佳剂量、同时使用RAS抑制剂的必要性以及对RAS阻断的适当监测等许多问题仍未得到解答。此外,由于遗传差异,个体对RAS阻断的反应也存在显著差异。回答这些问题需要直接接触RAS的心肌成分,它在很大程度上独立于其系统成分。使用对心肌血管紧张素转换酶和血管紧张素II型1受体具有高亲和力的放射性示踪剂进行分子成像,可以直接获得组织RAS,从而更好地了解个体患者左心室重构的病理生理。本文简要综述了靶向RAS成像评价心衰患者血管紧张素组织表达的潜力。
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引用次数: 31
Diagnostic and prognostic imaging of the cardiac sympathetic nervous system. 心脏交感神经系统的诊断和预后影像学。
Pub Date : 2008-08-01 DOI: 10.1038/ncpcardio1150
Jeanne M Link, James H Caldwell

Individuals with systolic dysfunction congestive heart failure may have decreased neuronal density, decreased neuronal function (reuptake or retention of norepinephrine), or a combination of these, plus reduction in postsynaptic beta-receptor density. Cardiac neuronal distribution and function can be imaged with standard gamma cameras and PET using radiolabeled analogs of norepinephrine. Postsynaptic beta-adrenergic receptor distribution and density can be determined using PET. Multiple imaging studies of the presynaptic component have reported that those individuals with the lowest retention or fastest washout of the radiolabeled analogs have a much greater annual mortality than do those with greater retention or slower washout rate. The results of some studies have suggested that the image abnormalities are better predictors of death than are more common predictors of outcome such as ejection fraction, heart rate variability, and microvolt T-wave alternans. The variability between these studies makes it unclear which measure of presynaptic dysfunction is the most predictive. beta-Receptor imaging has not been evaluated as extensively as a prognostic tool as has presynaptic imaging. Preliminary data suggest that regional mismatch between beta-receptors and presynaptic norepinephrine transporter function may serve as a marker for adverse outcome.

收缩期功能障碍的充血性心力衰竭患者可能有神经元密度降低,神经元功能下降(去甲肾上腺素的再摄取或保留),或这些的组合,加上突触后β受体密度降低。心脏神经元的分布和功能可以用标准伽玛相机和PET成像,使用放射性标记的去甲肾上腺素类似物。突触后β -肾上腺素能受体的分布和密度可以用PET测定。对突触前成分的多项影像学研究表明,放射性标记类似物保留最少或冲洗速度最快的个体,其年死亡率远高于保留最多或冲洗速度较慢的个体。一些研究结果表明,与射血分数、心率变异性和微伏t波交替等更常见的预后预测指标相比,图像异常更能预测死亡。这些研究之间的差异使得不清楚哪一种突触前功能障碍的测量是最具预测性的。受体成像还没有像突触前成像那样作为预后工具得到广泛的评估。初步数据表明,β受体和突触前去甲肾上腺素转运蛋白功能之间的区域不匹配可能是不良结果的标志。
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引用次数: 21
Multimodality nanotracers for cardiovascular applications. 用于心血管的多模态纳米示踪剂。
Pub Date : 2008-08-01 DOI: 10.1038/ncpcardio1242
Willem J M Mulder, David P Cormode, Sjoerd Hak, Mark E Lobatto, Stephane Silvera, Zahi A Fayad

Targeted imaging and therapeutics is becoming a field of prime importance in the study and treatment of cardiovascular disease; it promises to enable early diagnosis, promote improved understanding of pathology, and offer a way to improve therapeutic efficacy. Agents, particularly for cardiovascular disease, have been reported to permit the in vivo imaging, by multiple modalities, of macrophages, vascular targets such as vascular cell adhesion molecule 1, and markers for angiogenesis such as alpha(v)beta(3) integrin. In this Article, we first discuss the general concept of multimodality nanoparticles and then focus in greater depth on their clinical application for molecular imaging and therapy. Lastly, several examples of cardiovascular applications are discussed, including combined imaging and therapy approaches.

靶向成像和治疗正在成为心血管疾病研究和治疗的一个重要领域;它有望实现早期诊断,促进对病理学的更好理解,并提供一种提高治疗效果的方法。有报道称,一些药物,特别是心血管疾病的药物,可以通过多种方式对巨噬细胞、血管靶点(如血管细胞粘附分子1)和血管生成标志物(如α (v) β(3)整合素)进行体内成像。在这篇文章中,我们首先讨论了多模态纳米颗粒的一般概念,然后更深入地讨论了它们在分子成像和治疗中的临床应用。最后,讨论了心血管应用的几个例子,包括联合成像和治疗方法。
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引用次数: 45
Arithmetic of vulnerable plaques for noninvasive imaging. 易损斑块的无创成像算法。
Pub Date : 2008-08-01 DOI: 10.1038/ncpcardio1247
Jagat Narula, Pankaj Garg, Stephan Achenbach, Sadako Motoyama, Renu Virmani, H William Strauss

Sudden cardiac death and acute myocardial infarction often occur as the first manifestation of coronary artery disease. Otherwise asymptomatic individuals with subclinical atherosclerosis almost always have a classic risk-factor profile and it is essential that they are identified before the occurrence of an acute coronary event. The ability to recognize such individuals requires the development of strategies that can localize unstable atherosclerotic lesions. Plaques that are vulnerable to rupture demonstrate distinct histological characteristics, including large plaque and necrotic core volumes, extensive remodeling of the vessel at the lesion site, and attenuated fibrous caps. Precise metrics of typical vulnerable atherosclerotic plaque dimensions will need to be defined to facilitate their identification by noninvasive imaging modalities.

心源性猝死和急性心肌梗死常作为冠状动脉疾病的首发表现。否则,无症状的亚临床动脉粥样硬化患者几乎总是具有典型的危险因素特征,在急性冠状动脉事件发生之前对其进行识别是至关重要的。识别这些个体的能力需要能够定位不稳定动脉粥样硬化病变的策略的发展。易破裂的斑块表现出明显的组织学特征,包括大斑块和坏死的核心体积,病变部位血管的广泛重塑和纤维帽的减弱。需要定义典型易损动脉粥样硬化斑块尺寸的精确度量,以便通过无创成像方式进行识别。
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引用次数: 167
Detection of myocardial disorders by magnetic resonance spectroscopy. 磁共振波谱法检测心肌疾病。
Pub Date : 2008-08-01 DOI: 10.1038/ncpcardio1158
Lucy E Hudsmith, Stefan Neubauer

Magnetic resonance spectroscopy (MRS) utilizes magnetic resonance signals from nuclei, such as phosphorus-31, to provide information regarding the biochemical composition and metabolic state of cardiac muscle. This technique is the only method available for noninvasive assessment of cardiac metabolism without the need for the application of external radioactive tracers. MRS provides insights into the role of cardiac energetics in ischemic heart disease, heart failure, hypertrophy, and valve disease. Furthermore, response to therapeutic intervention can be monitored using this method. At present, this technique is used as a research tool, because low spatial and temporal resolution, as well as low reproducibility, precludes its diagnostic use in clinical practice; however, higher-field magnetic resonance systems-using, for example, 7 T-will enable improvements in resolution and reproducibility that may take cardiac MRS into the clinical realm.

磁共振波谱(MRS)利用来自核的磁共振信号,如磷-31,提供有关心肌生化组成和代谢状态的信息。这项技术是唯一一种无创评估心脏代谢而不需要使用外部放射性示踪剂的方法。MRS提供了心脏能量学在缺血性心脏病、心力衰竭、肥厚和瓣膜疾病中的作用。此外,可以使用这种方法监测对治疗干预的反应。目前,该技术被用作研究工具,因为低空间和时间分辨率,以及低可重复性,排除了其在临床实践中的诊断使用;然而,高场磁共振系统(例如使用7t)将提高分辨率和可重复性,可能将心脏MRS带入临床领域。
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引用次数: 38
期刊
Nature Clinical Practice. Cardiovascular Medicine
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