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Age-structured Delayed SIPCV Epidemic Model of HPV and Cervical Cancer Cells Dynamics II. Convergence of Numerical Solution 年龄结构延迟SIPCV流行模型与宫颈癌细胞动力学ⅱ。数值解的收敛性
Q2 Agricultural and Biological Sciences Pub Date : 2022-05-11 DOI: 10.55630/j.biomath.2022.03.278
V. Akimenko, F. Adi-Kusumo
The numerical method for simulation of age-structured SIPCV epidemic model with age-structured sub-classes of susceptible, infectious, precancerous and cancer cells and unstructured population of human papilloma virus (HPV) dynamics with incubation period is developed. Convergence of the numerical approximations is studied both theoretically and numerically. We prove the stability and second rate of convergence of the approximate solutions to the exact solution of the SIPCV epidemic nonlinear system. The numerical experiments based on the grid refined method confirm and illustrate the second order of accuracy of the obtained numerical method and show the various dynamical regimes of population dynamics. Simulations for model parameters of the system reveal two unstable dynamical regimes of SIPCV population which correspond to the cancer tumor growth and formation of metastases in organism.
建立了年龄结构的SIPCV流行模型的数值模拟方法,该模型包含年龄结构的易感细胞亚类、感染性细胞亚类、癌前细胞亚类和癌前细胞亚类以及未结构的人乳头瘤病毒(HPV)群体的潜伏期动态。从理论和数值两个方面研究了数值逼近的收敛性。证明了SIPCV流行病非线性系统精确解的近似解的稳定性和二阶收敛性。基于网格精细化方法的数值实验验证和说明了所得到的数值方法的二阶精度,并展示了种群动态的各种动态状态。对该系统模型参数的模拟揭示了SIPCV种群的两种不稳定的动态状态,它们对应于肿瘤在机体中的生长和转移的形成。
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引用次数: 1
Spike timing neural network model of conscious visual perception 有意识视觉感知的脉冲时序神经网络模型
Q2 Agricultural and Biological Sciences Pub Date : 2022-04-19 DOI: 10.55630/j.biomath.2022.02.258
P. Koprinkova, Simona Nedelcheva
The aim of the paper is to investigate the influence of thalamo-cortical connectivity on the conscious perception of visual stimuli. We conducted simulation experiments changing the key parameters of our spike timing neural network model of visual perception and decision making that are supposed to be related to conscious perception, namely bottom-up and top-down connections between thalamic relay, including Thalamic reticulate nucleus (TRN) and Lateral geniculate nucleus (LGN), and primary visual cortex (V1). The model output, that is perceptual based decision in the lateral intrapareital (LIP) area of the brain for left or right saccade generation, was observed. Conclusions about the influence of altered key parameters on the ability of our model to take proper decision were commented in respect to the observed activity in the brain areas responsible for conscious visual perception and decision making.
本文的目的是研究丘脑-皮层连接对视觉刺激的意识感知的影响。我们进行了模拟实验,改变了视觉感知和决策的尖峰时间神经网络模型的关键参数,这些参数被认为与意识感知有关,即丘脑中继(包括丘脑网状核(TRN)和外侧膝状核(LGN))与初级视皮层(V1)之间的自下而上和自上而下的连接。观察到了模型输出,即在大脑的横向心内(LIP)区域中用于左或右扫视生成的基于感知的决策。关于关键参数改变对我们的模型做出正确决策能力的影响的结论,根据观察到的负责有意识视觉感知和决策的大脑区域的活动进行了评论。
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引用次数: 0
Relationship between blood superoxide dismutase activity and zinc, copper, glutathione and metallothioneines concentrations in calves 犊牛血超氧化物歧化酶活性与锌、铜、谷胱甘肽和金属硫肽浓度的关系
Q2 Agricultural and Biological Sciences Pub Date : 2021-12-28 DOI: 10.11145/j.biomath.2021.11.247
V. Safonov, V. Ermakov, V. Danilova, V. Yakimenko
RedOx processes determine the resistance of the organism to pollutants. The aim of the study was to establish a possible relationship between copper and zinc concentration in the blood of calves and the enzyme activity of superoxide dismutase. The study was conducted in 2019 on 50 calves with a weight of 201-250 kg. The samples of venous blood were taken to estimate the level of hemoglobin, glutathione, metallothioneins, as well as zinc, copper, and superoxide dismutase activity. The obtained average values of these substances concentration were compared between each other. A positive correlation between the activity of superoxide dismutase and the concentration of zinc (r = 0.64) and copper (r = 0.87) in the blood of calves has been established. It may be because both metals are obligatory components of superoxide dismutase. There is also a positive relationship between the levels of copper and zinc (r = 0.68). For the other parameters, no reliable relationship was found. The data obtained indicate a positive relationship between the activity of superoxide dismutase and metal concentrations of copper and zinc in the blood of calves. At the same time, a more significant positive relationship is established for copper.
氧化还原过程决定了生物体对污染物的抵抗力。本研究的目的是建立犊牛血液中铜和锌浓度与超氧化物歧化酶活性之间的可能关系。该研究于2019年对50头体重在201-250公斤之间的小牛进行了研究。取静脉血,测定血红蛋白、谷胱甘肽、金属硫蛋白、锌、铜和超氧化物歧化酶活性。将得到的这些物质的浓度平均值相互比较。犊牛血液中锌(r = 0.64)和铜(r = 0.87)浓度与超氧化物歧化酶活性呈正相关。这可能是因为这两种金属都是超氧化物歧化酶的必需成分。铜和锌的含量之间也存在正相关(r = 0.68)。对于其他参数,没有发现可靠的关系。所得数据表明,犊牛血液中铜、锌金属浓度与超氧化物歧化酶活性呈正相关。与此同时,铜的正相关关系更为显著。
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引用次数: 10
Age-structured delayed SIPCV epidemic model of HPV and cervical cancer cells dynamics I. Numerical method 年龄结构延迟SIPCV流行模型与宫颈癌细胞动力学ⅰ。数值方法
Q2 Agricultural and Biological Sciences Pub Date : 2021-12-06 DOI: 10.11145/j.biomath.2021.10.027
V. Akimenko, F. Adi-Kusumo
The numerical method for simulation dynamics of nonlinear epidemic model of age-structured sub-populations of susceptible, infectious, precancerous and cancer cells and unstructured population of human papilloma virus (HPV) is developed (SIPCV model). Cell population dynamics is described by the initial-boundary value problem for the delayed semi-linear hyperbolic equations with age- and time-dependent coefficients and HPV dynamics is described by the initial problem for nonlinear delayed ODE. The model considers two time-delay parameters: the time between viral entry into a target susceptible cell and the production of new virus particles, and duration of the first stage of delayed immune response to HPV population growing. Using the method of characteristics and method of steps we obtain the exact solution of the SIPCV epidemic model in the form of explicit recurrent formulae. The numerical method designed for this solution and used the trapezoidal rule for integrals in recurrent formulae has a second order of accuracy. Numerical experiments with vanished mesh spacing illustrate the second order of accuracy of numerical solution with respect to the benchmark solution and show the dynamical regimes of cell-HPV population with the different phase portraits.
建立了人乳头瘤病毒(HPV)易感亚群、感染性亚群、癌前细胞亚群、癌前细胞亚群和非结构化亚群年龄结构非线性流行模型(SIPCV模型)的数值模拟动力学方法。细胞群体动力学由年龄和时间相关系数的延迟半线性双曲方程的初始边值问题描述,HPV动力学由非线性延迟ODE的初始问题描述。该模型考虑了两个时滞参数:病毒进入目标易感细胞和产生新病毒颗粒之间的时间,以及HPV群体增长的第一阶段延迟免疫反应的持续时间。采用特征法和步骤法,以显式递推公式的形式得到SIPCV流行模型的精确解。针对这一问题设计的数值解法,采用梯形法则对循环公式中的积分进行求解,具有二级精度。消除网格间距的数值实验说明了数值解相对于基准解的二阶精度,并显示了不同相画像下细胞- hpv群体的动态状态。
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引用次数: 3
Some mathematical tools for modelling malaria: a subjective survey 疟疾建模的一些数学工具:一项主观调查
Q2 Agricultural and Biological Sciences Pub Date : 2021-10-13 DOI: 10.11145/j.biomath.2021.10.029
J. Banasiak, R. Ouifki, W. A. Woldegerima
In this paper, we provide a brief survey of mathematical modelling of malaria and how it is used to understand the transmission and progression of the disease and design strategies for its control to support public health interventions and decision-making. We discuss some of the past and present contributions of mathematical modelling of malaria, including the recent development of modelling the transmission-blocking drugs. We also comment on the complexity of the malaria dynamics and, in particular, on its multiscale character with its challenges and opportunities. We illustrate the discussion by presenting a curve fitting using a 95% confidence interval for the South African data for malaria from the years 2001-2018$ and provide projections for the number of malaria cases and deaths up to the year 2025.
在本文中,我们简要介绍了疟疾的数学模型,以及如何使用它来理解疾病的传播和发展,以及如何设计控制策略,以支持公共卫生干预和决策。我们讨论了过去和现在对疟疾数学建模的一些贡献,包括最近对传播阻断药物建模的发展。我们还评论了疟疾动态的复杂性,特别是其多尺度特征及其挑战和机遇。我们通过对南非2001-2018年疟疾数据使用95%置信区间的曲线拟合来说明讨论,并提供了到2025年疟疾病例和死亡人数的预测。
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引用次数: 1
Qualitative analysis of a mathematical model about population of green turtles on the Galapagos island 加拉帕戈斯岛绿海龟种群数学模型的定性分析
Q2 Agricultural and Biological Sciences Pub Date : 2021-10-01 DOI: 10.11145/j.biomath.2021.07.293
Candy Herrera, C. Duque, H. Leiva
According to the IUCN, most sea turtles fall into one of the endangered categories. Since, sea turtles, like many other reptiles, present an unusual developmental process, marked by the determination of the sex of the offspring by environmental factors, more specifically by temperature. In the temperature sex determination (TSD) system the temperature of an embryo's environment during incubation period will dictate the embryo's sex development. This developmental process, together with the complex mating and nesting behavior and the vulnerability of sea turtles to threats of a natural or anthropogenic nature, naturally lead to the study of the population dynamics of the species.? For this reason, in this paper, we have developed a continuous model given by a system of three ordinary differential equations to study the dynamics of the green sea turtle population long-term, focusing the mathematical simulations on the data obtained for the nesting species of Galapagos Islands. Through the qualitative analysis of the model, the following is demonstrated: 1) The flow induced by the system is positively invariant on the region of biological interest and 2). The given condition on is necessary and sufficient for the unique nontrivial equilibrium point to be globally asymptotically stable in that region. When implementing the estimated values for our parameters in the numerical simulations, it was observed that indeed the population of Galapagos green sea turtles complies with the condition for which the nontrivial critical point is globally asymptotically stable.
根据国际自然保护联盟的说法,大多数海龟都属于濒危物种之一。因为,海龟和许多其他爬行动物一样,呈现出一个不同寻常的发育过程,其特征是由环境因素,更具体地说是由温度决定后代的性别。在温度性别决定(TSD)系统中,胚胎在孵化期的环境温度将决定胚胎的性别发育。这种发育过程,再加上海龟复杂的交配和筑巢行为,以及海龟容易受到自然或人为威胁,自然导致了对该物种种群动态的研究。?因此,在本文中,我们开发了一个由三个常微分方程组给出的连续模型,以长期研究绿海龟种群的动态,重点对加拉帕戈斯群岛筑巢物种的数据进行数学模拟。通过对模型的定性分析,证明了以下几点:1)系统诱导的流动在生物感兴趣的区域上是正不变的;2)。上的给定条件是唯一非平凡平衡点在该区域全局渐近稳定的充要条件。当在数值模拟中实现我们参数的估计值时,可以观察到加拉帕戈斯绿海龟的种群确实符合非平凡临界点全局渐近稳定的条件。
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引用次数: 0
Mathematical model for acquiring immunity to malaria: a PDE approach 获得疟疾免疫力的数学模型:PDE方法
Q2 Agricultural and Biological Sciences Pub Date : 2021-09-12 DOI: 10.11145/j.biomath.2021.07.227
S. Tchoumi, Y. T. Kouakep, D. Fotsa, F. G. T. Kamba, J. Kamgang, D. Houpa
We develop a new model of integro-differential equations coupled with a partial differential equation that focuses on the study of the? naturally acquiring immunity to malaria induced by exposure to infection. We analyze a continuous acquisition of immunity after infected individuals are treated. It exhibits complex and realistic mechanisms precised mathematically in both disease free or endemic context and in several numerical simulations showing the interplay between infection through the bite of mosquitoes. The model confirms the (partial) premunition of the human population in the regions where malaria is endemic. As common in literature, we indicate an equivalence of the basic reproduction rate as the spectral radius of a next generation operator.
我们建立了一个新的积分-微分方程与偏微分方程耦合的模型,重点研究了?因接触感染而自然获得对疟疾的免疫力。我们分析了感染者在接受治疗后持续获得免疫力的情况。它展示了复杂和现实的机制,无论是在无病或地方病的情况下,还是在几个数值模拟中,都精确地显示了通过蚊子叮咬感染之间的相互作用。该模型证实了疟疾流行地区人口的(部分)免疫。与文献中常见的一样,我们将基本繁殖率等效为下一代算子的谱半径。
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引用次数: 1
Mathematical Modeling and Analysis of Covid-19 Infection spreads in India with Restricted Optimal Treatment on Disease Incidence 新冠肺炎感染在印度传播的数学模型与分析
Q2 Agricultural and Biological Sciences Pub Date : 2021-07-17 DOI: 10.11145/J.BIOMATH.2021.06.147
Debkumar Pal, D. Ghosh, P. Santra, G. Mahapatra
This paper presents the current situation and how to minimize its effect in India through a mathematical model of infectious Coronavirus disease (COVID-19). This model consists of six compartments to population classes consisting of susceptible, exposed, home quarantined, government quarantined, infected individuals in treatment, and recovered class. The basic reproduction number is calculated, and the stabilities of the proposed model at the disease-free equilibrium and endemic equilibrium are observed. The next crucial treatment control of the Covid-19 epidemic model is presented in India's situation. An objective function is considered by incorporating the optimal infected individuals and the cost of necessary treatment. Finally, optimal control is achieved that minimizes our anticipated objective function. Numerical observations are presented utilizing MATLAB software to demonstrate the consistency of present-day representation from a realistic standpoint.
本文通过传染性冠状病毒疾病(新冠肺炎)的数学模型,介绍了印度的现状以及如何最大限度地减少其影响。该模型由六个分区组成,分为易感人群、暴露人群、居家隔离人群、政府隔离人群、接受治疗的感染者和康复人群。计算了基本繁殖数,并观察了所提出的模型在无病平衡和地方病平衡下的稳定性。新冠肺炎疫情模型的下一个关键治疗控制是在印度的情况下提出的。通过结合最佳感染者和必要治疗的成本来考虑目标函数。最后,实现了使我们预期的目标函数最小化的最优控制。利用MATLAB软件进行数值观测,从现实的角度证明了当前表示的一致性。
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引用次数: 4
COVID-19 changing the face of the world. Can sub-Sahara Africa cope? COVID-19改变了世界的面貌。撒哈拉以南的非洲能应付吗?
Q2 Agricultural and Biological Sciences Pub Date : 2021-03-29 DOI: 10.11145/J.BIOMATH.2021.03.117
M. H. Machingauta, Bwayla Lungu, E. Lungu
We formulate a mathematical model for the spread of the coronavirus which incorporates adherence to disease prevention. The major results of this study are: first, we determined optimal infection coefficients such that high levels of coronavirus transmission are prevented. Secondly, we have found that there? exists several optimal pairs of removal rates, from the general population of asymptomatic and symptomatic infectives respectively that can protect hospital bed capacity and flatten the hospital admission curve. Of the many optimal strategies, this study recommends the pair that yields the least number of coronavirus related deaths. The results for South Africa, which is better placed than the other sub-Sahara African countries, show that failure to address hygiene and adherence issues will preclude the existence of an optimal strategy and could result in a more severe epidemic than the Italian COVID-19 epidemic. Relaxing lockdown measures to allow individuals to attend to vital needs such as food replenishment increases household and community infection rates and the severity of the overall infection.
我们为冠状病毒的传播制定了一个数学模型,其中包括对疾病预防的坚持。本研究的主要结果是:首先,我们确定了最佳感染系数,从而防止了冠状病毒的高水平传播。其次,我们发现有?分别从无症状感染者和有症状感染者的一般人群中存在几种最优的清除率对,可以保护医院床位容量并使住院曲线平坦。在许多最佳策略中,本研究推荐了导致冠状病毒相关死亡人数最少的两种策略。南非的情况比其他撒哈拉以南非洲国家要好,结果表明,不解决卫生和依从性问题将排除最佳战略的存在,并可能导致比意大利COVID-19流行病更严重的流行病。放松封锁措施,让个人能够满足食品补给等重要需求,会增加家庭和社区感染率以及整体感染的严重程度。
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引用次数: 1
Scenarios for the spread of COVID-19 analyzed by the TVBG-SEIR spline model 利用TVBG-SEIR样条模型分析COVID-19传播情景
Q2 Agricultural and Biological Sciences Pub Date : 2021-03-15 DOI: 10.11145/J.BIOMATH.2021.03.087
O. Kounchev, G. Simeonov, Z. Kuncheva
We develop a novel TVBG-SEIR spline model for analysis of the coronavirus infection (COVID-19). It aims to analyze the long-term global evolution of the epidemics "controlled" by the introduction of lockdown/open up measures by the authorities. The incorporation of different "lockdown scenarios" varying in time permits to analyze not only the primary epidemic wave but also the arising secondary wave and any further waves.The model is supplied by a web-based Scenario Building Tool for COVID-19 (called shortly SBT-COVID19) which may be used as a decision support software by (health) policy makers to explore various scenarios. This can be achieved by controlling/changing the scale of the containment measures (home and social isolation/quarantine, travel restrictions and other) and to assess their effectiveness. In particular, the SBT-COVID19 Tool permits to assess how long the lockdown measures should be maintained.
我们建立了一种新的TVBG-SEIR样条模型,用于分析冠状病毒感染(COVID-19)。它旨在分析通过当局采取封锁/开放措施“控制”的流行病的长期全球演变。结合不同时间的不同“封锁情景”,不仅可以分析主要的流行病波,还可以分析正在出现的第二波和任何进一步的波。该模型由基于网络的COVID-19情景构建工具(简称sbt - COVID-19)提供,可作为(卫生)政策制定者探索各种情景的决策支持软件。这可以通过控制/改变遏制措施(家庭和社会隔离/检疫、旅行限制等)的规模和评估其有效性来实现。特别是,sbt - covid - 19工具允许评估封锁措施应维持多长时间。
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引用次数: 7
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