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The nutritional and industrial significance of cottonseeds and genetic techniques in gossypol detoxification 棉籽的营养和工业意义及棉酚脱毒的遗传技术
2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2023-10-02 DOI: 10.1002/ppp3.10433
Vincent Ninkuu, Zhixin Liu, Yaping Zhou, Xuwu Sun
Societal Impact Statement Gossypol and its derivatives represent a class of toxic and immunosuppressive compounds that are naturally synthesized in cottonseed. These compounds pose several health hazards to humans and animals, such as heart and lung damage, breathing difficulties, and death in swine. In poultry, gossypol reduces egg production and slows growth. Studies have also shown that gossypol can indirectly harm humans and animals through the food chain. Although several physical and chemical approaches are adopted to reduce gossypol levels in cottonseed before food and feed processing, these techniques are expensive. Therefore, genetically regulating gossypol production in cotton could provide a cheaper alternative. Summary Cotton ( Gossypium spp.), the most important fiber crop, is cultivated in over a hundred countries to provide raw materials for the growing textile industry. The seed obtained after delinting cotton is a rich source of protein with a vast potential for oil and feed production. Cottonseed oil production is estimated at 5.08 million metric tons and is expected to generate over 6.56 billion United States Dollars in revenue by 2029. The cake from defatted cottonseed is used as animal feed and food supplements. However, the contamination of gossypol in cottonseed limits its use. Gossypol ingestion impairs weight gain and causes anorexia, respiratory distress, and death under extreme exposure. This review highlights the significance of cottonseed oil and meal; the pharmacological uses and impact of gossypol; the chemistry, toxicity, and bioactivity of gossypol; and the physical and chemical methods used in gossypol removal during feed and food supplement processing. In addition, the biosynthetic pathway of gossypol and attempts to genetically transform some key regulators of this pathway to produce glandless cottonseed or reduce the gossypol levels in the seed are discussed.
棉酚及其衍生物是一类有毒的免疫抑制化合物,是在棉籽中自然合成的。这些化合物对人类和动物造成若干健康危害,如心肺损伤、呼吸困难和猪死亡。在家禽中,棉酚会减少产蛋量并减缓生长。研究还表明,棉酚可以通过食物链间接危害人类和动物。虽然在食品和饲料加工前采用了几种物理和化学方法来降低棉籽中的棉酚含量,但这些技术都很昂贵。因此,对棉花中的棉酚生产进行基因调控可以提供一种更便宜的选择。棉花(Gossypium spp.)是最重要的纤维作物,一百多个国家都在种植棉花,为不断发展的纺织工业提供原料。脱色后获得的棉花种子是丰富的蛋白质来源,具有巨大的石油和饲料生产潜力。棉籽油产量估计为508万吨,预计到2029年将产生超过65.6亿美元的收入。脱脂棉籽饼用作动物饲料和食品补充剂。然而,棉籽中棉酚的污染限制了其使用。棉酚摄入会损害体重增加,并导致厌食症、呼吸窘迫和在极端暴露下死亡。本文综述了棉籽油和棉籽粕的研究意义;棉酚的药理作用和影响;棉酚的化学、毒性和生物活性;以及饲料和食品添加剂加工过程中棉酚去除的物理和化学方法。此外,本文还讨论了棉酚的生物合成途径,并尝试对该途径的一些关键调控因子进行遗传改造,以生产无腺体棉籽或降低棉籽中的棉酚水平。
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引用次数: 1
Strigolactone biosynthesis lgs1 mutant alleles mined from the sorghum accession panel are a promising resource of resistance to witchweed (Striga) parasitism 从高粱加入板中提取的独脚金内酯生物合成lgs1突变等位基因是抗独脚金寄生的一个有前景的资源
2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2023-09-28 DOI: 10.1002/ppp3.10442
Sylvia Mutinda, Muhammad Jamil, Jian You Wang, Lamis Berqdar, Elijah Ateka, Emily S. Bellis, Salim Al‐Babili, Steven Runo
Societal Impact Statement Striga is a parasitic plant that greatly limits the production of Africa's most staple cereals, including sorghum. Infection occurs when the parasite germinates in response to biomolecules emitted into the soil from the host's roots. Some sorghum genotypes harbor a mutation that makes them ineffective in stimulating Striga seed germination. This resistance is of great importance because of its possible application in Striga management. Here, additional resistant sorghum genotypes with varying levels of Striga resistance are discussed in the context of their candidacy for integration in breeding programs and their possible role in alleviating food insecurity in sub‐Saharan Africa by reducing crop losses because of Striga infestation. Summary Sorghum is a food staple for millions of people in sub‐Saharan Africa, but its production is greatly diminished by Striga , a parasitic weed. An efficient and cost‐effective way of managing Striga in smallholder farms in Africa is to deploy resistant varieties of sorghum. Here, we leverage genomics and the vast genetic diversity of sorghum—evolutionarily adapted to cope with Striga parasitism in Africa—to identify new Striga ‐resistant sorghum genotypes by exploiting a resistance mechanism hinged on communication molecules called strigolactones (SLs), exuded by hosts to trigger parasite seed germination. We achieved this by mining for mutant alleles of the LOW GERMINATION STIMULANT 1 ( LGS1 ) that are ineffective in stimulating Striga germination from the sorghum accession panel (SAP). Our analysis identified lgs1 sorghum genotypes, which we named SAP‐ lgs1 . SAP‐ lgs1 had the SL exudation profile of known lgs1 sorghum, whose hallmark is the production of the low inducer of germination, orobanchol. Laboratory and field resistance screens showed that the SAP‐ lgs1 genotypes also exhibited remarkable resistance against Striga . Our findings have the potential to reduce crop losses because of Striga parasitism and therefore have far‐reaching implications for improving food security in Africa.
Striga是一种寄生植物,它极大地限制了非洲最主要谷物的生产,包括高粱。当寄生虫对从宿主根部释放到土壤中的生物分子作出反应而发芽时,就会发生感染。一些高粱基因型含有一种突变,使它们无法刺激斯特里加菌种子发芽。这种抗性非常重要,因为它可能应用于斯特里加的管理。本文讨论了具有不同程度斯特riga抗性的其他抗性高粱基因型在育种计划中的候选资格,以及它们通过减少斯特riga侵袭造成的作物损失,在缓解撒哈拉以南非洲粮食不安全方面可能发挥的作用。高粱是撒哈拉以南非洲数百万人的主食,但它的产量被一种寄生杂草Striga大大减少。在非洲的小农农场中管理斯特里加菌的一种有效且具有成本效益的方法是部署具有抗性的高粱品种。在这里,我们利用基因组学和高粱的巨大遗传多样性——进化适应了非洲的斯特riga寄生——通过利用一种依赖于被称为斯特riga内酯(SLs)的通讯分子的抗性机制,鉴定出新的抗斯特riga高粱基因型,这种分子由宿主分泌,以触发寄生虫种子萌发。我们通过挖掘低萌发刺激物1 (LGS1)的突变等位基因来实现这一目标,这些突变等位基因对高粱接穗板(SAP)的Striga萌发无效。我们的分析鉴定出lgs1高粱基因型,我们将其命名为SAP‐lgs1。SAP‐lgs1具有已知lgs1高粱的SL分泌物特征,其标志是产生低萌发诱导剂,orobancho。实验室和田间抗性筛选显示,SAP‐lgs1基因型对斯特里加病毒也表现出显著的抗性。我们的发现有可能减少因斯特里加线虫寄生造成的作物损失,因此对改善非洲的粮食安全具有深远的意义。
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引用次数: 0
Poison ivy (Toxicodendron radicans) leaf shape variability: Why plant avoidance‐by‐identification recommendations likely do not substantially reduce poison ivy rash incidence 毒葛(Toxicodendron radicans)叶片形状的可变性:为什么植物通过识别来避免的建议可能不会显著减少毒葛皮疹的发病率
2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2023-09-27 DOI: 10.1002/ppp3.10439
John G. Jelesko, Kyla Thompson, Noah Magerkorth, Elizabeth Verteramo, Hannah Becker, Joy G. Flowers, Jonathan Sachs, Jyotishka Datta, Jordan Metzgar
Societal Impact Statement Avoidance of poison ivy plants is currently the primary approach to prevent the estimated 30–50 million annual poison ivy skin rash cases. The “leaves of three let it be” mnemonic device lacks specificity to differentiate poison ivy from other three‐leaflet native plants. This report demonstrated that poison ivy leaves show marked total leaf shape variability that likely confounds accurate poison ivy plant identification, and significantly undermines a poison ivy avoidance strategy for mitigating poison ivy rash cases. Therefore, there is an ongoing need to develop prophylactic medical procedures to prevent poison ivy rash that do not depend on human poison ivy plant identification. Summary Urushiol is the natural product produced by poison ivy ( Toxicodendron radicans ) that is responsible for millions of cases of delayed contact allergenic dermatitis in North America each year. Avoidance of poison ivy plant material is the clinically recommended strategy for preventing urushiol‐induced dermatitis symptoms. However, poison ivy leaf shape is anecdotally notoriously variable, thereby confounding accurate poison ivy identification. This study focused on quantitative analyses of poison ivy and a common poison ivy look‐alike (American hog peanut) leaf shape variability in North America to empirically validate the high degree of poison ivy leaf shape plasticity. Poison ivy and American hog peanut iNaturalist.org records were scored for seven attributes of compound leaf shape that were combined to produce a total leaf complexity score. Both the mean and the distribution of poison ivy total leaf complexity scores were significantly greater than that of American hog peanut. Non‐metric multidimensional scaling analyses corroborated a high degree of poison ivy leaf shape variability relative to American hog peanut. A poison ivy accession producing frequent palmate penta‐leaflet compound leaves was evaluated using linear regression modeling. Poison ivy total leaf complexity was exceedingly variable across a given latitude or longitude. With that said, there was a small but significant trend of poison ivy total leaf complexity increasing from east to west. Palmate penta‐leaflet formation was significantly correlated with a stochastic leaflet deep‐lobing developmental process in one unusual poison ivy accession. The empirically‐validated poison ivy leaf shape hypervariability described in this report likely confounds accurate poison ivy identification, thereby likely resulting in many accidental urushiol‐induced clinical allergenic dermatitis cases each year.
避免食用毒葛植物是目前预防每年约3000万至5000万例毒葛皮疹病例的主要方法。“三叶随它”的助记方法在区分毒葛与其他三叶本土植物方面缺乏特异性。该报告表明,毒葛叶子显示出明显的总叶片形状变化,这可能会混淆准确的毒葛植物识别,并显著破坏了减轻毒葛皮疹病例的毒葛避免策略。因此,有一个持续的需要发展预防性医疗程序,以防止毒葛皮疹,不依赖于人类毒葛植物鉴定。漆酚是由毒葛(毒藤)产生的天然产物,每年在北美造成数百万例延迟接触性过敏性皮炎。避免毒葛植物材料是临床推荐的策略,以防止漆酚诱导的皮炎症状。然而,众所周知,毒葛叶的形状是可变的,因此混淆了准确的毒葛识别。本研究着重于对北美毒葛和一种常见的毒葛外观(美国猪花生)叶片形状的可变性进行定量分析,以经验验证毒葛叶片形状的高度可塑性。在iNaturalist.org网站上,对毒葛和美国猪花生的复叶形状的七个属性进行了评分,这些属性组合在一起产生了叶片的总复杂性评分。毒葛总叶复杂性评分的均值和分布均显著大于美洲猪花生。非度量多维尺度分析证实了毒葛叶片形状与美国猪花生的高度变异。利用线性回归模型对一株毒藤株产生频繁掌状五叶复叶进行了评价。毒藤叶子的总复杂性在给定的纬度或经度上变化很大。因此,毒葛总叶复杂性呈现出由东向西递增的小而显著的趋势。在一个不同寻常的毒葛株中,掌叶五小叶的形成与随机小叶深裂发育过程显著相关。本报告中描述的经经验验证的毒葛叶形状高度变异可能会混淆准确的毒葛识别,从而可能导致每年许多意外的漆酚诱导的临床过敏性皮炎病例。
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引用次数: 0
Multigenerational differences in harvesting and use of wild edible fruits and nuts in the South Caucasus 南高加索地区野生可食用水果和坚果的收获和使用的多代差异
2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2023-09-27 DOI: 10.1002/ppp3.10434
Aisyah Faruk, Anush Nersesyan, Astghik Papikyan, Sona Galstyan, Emma Hakobyan, Tinatin Barblishvili, Tsira Mikatadze‐Pantsulaia, Tamaz Darchidze, Marina Kuchukhidze, Nona Kereselidze, David Kikodze, Ian Willey, Philippa Ryan, Elinor Breman
Societal Impact Statement Ecosystem services are underpinned by biodiversity, which is rapidly eroding globally, threatening rural livelihoods and culture. Examining the uses of wild edible plants (WEPs) that are important to rural communities gives insight into the value of a biodiverse landscape to local communities. Here, the importance of considering age groups in future ethnobotanical and conservation studies is highlighted, as this can enhance our understanding on the dependence of use within a landscape, informing more inclusive conservation actions. Summary Wild edible plants (WEP) remain an important aspect of many rural communities across the world, yet the decline in the diversity and knowledge of WEP use is becoming a global concern. In the Biodiversity Hotspot of the Caucasus, there is few cross‐cultural and multigenerational comparisons of plant uses, limiting our knowledge of resource use and dependence within biodiverse landscapes. Here, we investigate the patterns of use for wild edible fruits and nuts in the South Caucasus, focusing on multigenerational differences in harvesting patterns, diversity and use through semi‐structured interviews in Armenia and Georgia. We calculated use values (UV) for each genera harvested and compared the diversity of genera used between age groups. Pearson chi‐square was used to explore the relationship between age‐groups and genera harvested. We found 53% of rural population ( n = 220) actively harvest from wild populations, with older age groups harvesting the highest diversity of plants. Twenty‐four species from 16 genera are harvested, with Berberis vulgaris L. and Rosa canina L. shared between both communities. The association between age and diversity of harvested genera was significant (χ 2 [48, N = 506] = 114.75, p < .01), mainly driven by a strong positive association with Berberis spp. L., Crataegus spp. L. and Ribes spp. L. with the under 18s and Prunus spp. L. with under 35s. Young harvesters used WEP for income generation, while medicinal use increases across older age groups. Foraging activities within South Caucasus' communities remains active; however, the use of WEP is not uniform within and across different communities.
生态系统服务以生物多样性为基础,而生物多样性正在全球范围内迅速流失,威胁着农村生计和文化。研究对农村社区很重要的野生可食用植物(wep)的利用,可以深入了解生物多样性景观对当地社区的价值。在这里,强调了在未来的民族植物学和保护研究中考虑年龄组的重要性,因为这可以增强我们对景观中使用依赖性的理解,为更具包容性的保护行动提供信息。野生可食植物(WEP)仍然是世界上许多农村社区的一个重要方面,然而,野生可食植物利用多样性和知识的下降正在成为一个全球性的问题。在高加索生物多样性热点地区,很少有跨文化和多代植物利用的比较,限制了我们对生物多样性景观中资源利用和依赖的认识。在这里,我们调查了南高加索地区野生食用水果和坚果的使用模式,通过在亚美尼亚和格鲁吉亚进行的半结构化访谈,重点关注收获模式、多样性和使用方面的多代差异。我们计算了每个收获的属的利用值(UV),并比较了不同年龄组间使用的属的多样性。使用皮尔逊卡方来探讨年龄组和收获属之间的关系。我们发现53%的农村人口(n = 220)积极地从野生种群中收获植物,年龄较大的人群收获的植物多样性最高。共收获16属24种,其中小檗属(Berberis vulgaris L.)和犬蔷薇属(Rosa canina L.)为两个群落共有。年龄与采伐属多样性之间存在显著相关性(χ 2 [48, N = 506] = 114.75, p <.01),主要与小檗、山楂、山梨与18岁以下和李与35岁以下呈显著正相关。年轻的采矿者将WEP用于创收,而老年群体的医疗用途则有所增加。南高加索社区内的觅食活动仍然活跃;然而,WEP的使用在不同的社区内部和社区之间并不统一。
{"title":"Multigenerational differences in harvesting and use of wild edible fruits and nuts in the South Caucasus","authors":"Aisyah Faruk, Anush Nersesyan, Astghik Papikyan, Sona Galstyan, Emma Hakobyan, Tinatin Barblishvili, Tsira Mikatadze‐Pantsulaia, Tamaz Darchidze, Marina Kuchukhidze, Nona Kereselidze, David Kikodze, Ian Willey, Philippa Ryan, Elinor Breman","doi":"10.1002/ppp3.10434","DOIUrl":"https://doi.org/10.1002/ppp3.10434","url":null,"abstract":"Societal Impact Statement Ecosystem services are underpinned by biodiversity, which is rapidly eroding globally, threatening rural livelihoods and culture. Examining the uses of wild edible plants (WEPs) that are important to rural communities gives insight into the value of a biodiverse landscape to local communities. Here, the importance of considering age groups in future ethnobotanical and conservation studies is highlighted, as this can enhance our understanding on the dependence of use within a landscape, informing more inclusive conservation actions. Summary Wild edible plants (WEP) remain an important aspect of many rural communities across the world, yet the decline in the diversity and knowledge of WEP use is becoming a global concern. In the Biodiversity Hotspot of the Caucasus, there is few cross‐cultural and multigenerational comparisons of plant uses, limiting our knowledge of resource use and dependence within biodiverse landscapes. Here, we investigate the patterns of use for wild edible fruits and nuts in the South Caucasus, focusing on multigenerational differences in harvesting patterns, diversity and use through semi‐structured interviews in Armenia and Georgia. We calculated use values (UV) for each genera harvested and compared the diversity of genera used between age groups. Pearson chi‐square was used to explore the relationship between age‐groups and genera harvested. We found 53% of rural population ( n = 220) actively harvest from wild populations, with older age groups harvesting the highest diversity of plants. Twenty‐four species from 16 genera are harvested, with Berberis vulgaris L. and Rosa canina L. shared between both communities. The association between age and diversity of harvested genera was significant (χ 2 [48, N = 506] = 114.75, p < .01), mainly driven by a strong positive association with Berberis spp. L., Crataegus spp. L. and Ribes spp. L. with the under 18s and Prunus spp. L. with under 35s. Young harvesters used WEP for income generation, while medicinal use increases across older age groups. Foraging activities within South Caucasus' communities remains active; however, the use of WEP is not uniform within and across different communities.","PeriodicalId":52849,"journal":{"name":"Plants People Planet","volume":"21 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135536973","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic variation in Loudetia simplex supports the presence of ancient grasslands in Madagascar 单纯Loudetia simplex的遗传变异支持了马达加斯加古代草原的存在
2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2023-09-27 DOI: 10.1002/ppp3.10437
George P. Tiley, Andrew A. Crowl, Tchana O. M. Almary, W. R. Quentin Luke, Cédrique L. Solofondranohatra, Guillaume Besnard, Caroline E. R. Lehmann, Anne D. Yoder, Maria S. Vorontsova
Societal Impact Statement Recognizing Loudetia ‐dominated grasslands were widespread prior to human colonization highlights that open ecosystems were and continue to be an important component of Madagascar's biodiversity. A better understanding of the plant species that form grassland ecosystems is necessary for effective land management strategies that support livelihoods, but substantial financial and logistical barriers exist to implementing conservation genetic studies using contemporary genomic tools. Some challenges for population genetic analyses of non‐model polyploids lacking reference genomes can be ameliorated by developing computational resources that leverage a cost‐effective data generation strategy that requires no prior genetic knowledge of the target species. This may benefit conservation programs with small operating budgets while reducing uncertainty compared to status quo microsatellite assays. Summary The extent of Madagascar's grasslands prior to human colonization is unresolved. We used population genetic analyses of a broadly dominant C 4 fire‐adapted grass, Loudetia simplex , as a proxy for estimating grassland change through time. We carefully examined the utility of target‐enrichment data for population genetics to make recommendations for conservation genetics. We explored the potential of estimating individual ploidy levels from target‐enrichment data and how assumptions about ploidy could affect analyses. We developed a novel bioinformatic pipeline to estimate ploidy and genotypes from target‐enrichment data. We estimated standard population genetic summary statistics in addition to species trees and population structure. Extended Bayesian skyline plots provided estimates of population size through time for empirical and simulated data. All Malagasy L. simplex individuals sampled in this study formed a clade and possibly indicated an ancestral Central Highland distribution of 800 m in altitude and above. Demographic models suggested grassland expansions occurred prior to the Last Interglacial Period and supported extensive grasslands prior to human colonization. Though there are limitations to target‐enrichment data for population genetic studies, we find that analyses of population structure are reliable. Genetic variation in L. simplex supports widespread grasslands in Madagascar prior to the more recent periods of notable paleoclimatic change. However, the methods explored here could not differentiate between paleoclimatic change near the Last Glacial Maximum and anthropogenic effects. Target‐enrichment data can be a valuable tool for analyses of population structure in the absence a reference genome.
社会影响声明承认在人类殖民之前,以Loudetia为主导的草原是广泛存在的,这突出了开放的生态系统是并且将继续是马达加斯加生物多样性的重要组成部分。更好地了解构成草原生态系统的植物物种对于支持生计的有效土地管理战略是必要的,但使用当代基因组工具实施保护性遗传研究存在巨大的财政和后勤障碍。缺乏参考基因组的非模型多倍体群体遗传分析的一些挑战可以通过开发计算资源来改善,这些计算资源利用成本效益高的数据生成策略,不需要事先了解目标物种的遗传知识。与目前的微卫星分析相比,这可能有利于低运营预算的保护项目,同时减少不确定性。在人类殖民之前,马达加斯加草原的范围尚未得到解决。我们使用了广泛优势的c4火适应草(Loudetia simplex)的群体遗传分析,作为估计草地随时间变化的代理。我们仔细检查了目标富集数据在群体遗传学中的效用,从而为保护遗传学提出建议。我们探索了从目标富集数据估计个体倍性水平的潜力,以及关于倍性的假设如何影响分析。我们开发了一种新的生物信息学管道,从目标富集数据中估计倍性和基因型。除了树种树和种群结构外,我们还估计了标准种群遗传汇总统计。扩展贝叶斯天际线图为经验和模拟数据提供了随时间变化的人口规模估计。本研究取样的所有马达加斯加单孢松属个体均形成一个分支,可能表明其祖先分布在海拔800 m及以上的中央高原。人口统计学模型表明,草原扩张发生在末次间冰期之前,并支持人类殖民之前的广阔草原。尽管在群体遗传研究中靶标富集数据存在局限性,但我们发现群体结构分析是可靠的。在最近的显著古气候变化时期之前,单纯L.的遗传变异支持马达加斯加广泛的草原。然而,本文所探索的方法不能区分末次盛冰期附近的古气候变化和人为影响。在缺乏参考基因组的情况下,目标富集数据可以成为分析种群结构的有价值的工具。
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引用次数: 0
Lavaka (erosional gullies) provide productive patch environments for flora and farming in Madagascar's grassy highlands 拉瓦卡(侵蚀沟壑)在马达加斯加的草地高地为植物和农业提供了肥沃的斑块环境
2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2023-09-25 DOI: 10.1002/ppp3.10440
Rónadh Cox, Alizé Carrère, Amos F. M. Rakotondrazafy, Ny Riavo Voarintsoa
Societal Impact Statement Lavaka, large gullies in Madagascar, can cause problems for farmers and for infrastructure, but these features also have beneficial aspects that have generally been overlooked. They provide plant refugia, and commonly host species that would otherwise not thrive on the grassy uplands. Farmers sometimes make use of lavaka to plant crops that require more protection or soil moisture. Colonial narratives blame lavaka erosion on poor land management but ignore their pre‐human‐settlement existence on the landscape and the ecological functions they serve. The knowledge and wisdom of Malagasy farmers are key to better understanding the complex roles that lavaka plays in the landscape. Summary This paper combines a review of lavaka—erosional gullies in Madagascar's grass‐covered highlands—with new observations of their importance as ecological patch environments for a wide range of plants not seen elsewhere within the grassy biome. Lavaka play a role as a natural refugia for flora that would otherwise not thrive on the exposed and infertile hillslopes, and local farmers exploit their topography and sediment deposits to grow a variety of crops. We provide a classification scheme for lavaka based on the extent to which they have been colonised by vegetation. Our analysis is based on observations made over many field seasons in the highlands as well as interviews with Malagasy farmers living with lavaka on their land. We emphasise the importance of local knowledge and environmental wisdom in the analysis of landscape evolution, and we conclude that lavaka, while certainly an erosional problem in many places, can nonetheless provide valuable ecosystem services and agricultural opportunities that should not be overlooked.
马达加斯加的拉瓦卡(Lavaka)大沟渠可能会给农民和基础设施带来问题,但这些特征也有通常被忽视的有益方面。它们为植物提供了避难所,并通常为那些在草地高地上无法茁壮成长的物种提供了宿主。农民有时利用拉瓦卡种植需要更多保护或土壤湿度的作物。殖民叙事将lavaka侵蚀归咎于土地管理不善,但忽视了它们在人类定居之前对景观的存在及其所起的生态功能。马达加斯加农民的知识和智慧是更好地理解lavaka在景观中扮演的复杂角色的关键。这篇论文结合了对马达加斯加草覆盖高地的熔岩侵蚀沟槽的回顾,以及它们作为生态斑块环境的重要性的新观察,这些生态斑块环境对于在草覆盖的生物群系中其他地方看不到的广泛植物是重要的。Lavaka是植物的天然避难所,否则植物不会在裸露和贫瘠的山坡上茁壮成长,当地农民利用其地形和沉积物沉积物种植各种作物。我们根据lavaka被植被殖民的程度为它们提供了一个分类方案。我们的分析是基于对高原许多田间季节的观察,以及对在自己的土地上使用lavaka的马达加斯加农民的采访。我们强调了当地知识和环境智慧在景观演变分析中的重要性,我们得出结论,虽然在许多地方肯定是一个侵蚀问题,但lavaka仍然可以提供宝贵的生态系统服务和农业机会,这些都不应被忽视。
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引用次数: 0
Global access to nomenclatural botanical resources: Evaluating open access availability 命名植物资源的全球获取:评估开放获取的可用性
2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2023-09-21 DOI: 10.1002/ppp3.10438
Nicky Nicolson, Maarten Trekels, Quentin J. Groom, Sandra Knapp, Alan J. Paton
Societal Impact Statement Primary occurrence data ( ‘ what, where, when ’ ) enable study of species distribution and diversity, facilitating reactions to societal challenges from food security to climate change mitigation. Scientific names integrate information and are made concrete through reference to a type specimen. Research and conservation planning requires timely open access to this data. Around 2000 vascular plant species are described each year, and many are narrowly endemic and face conservation threats. Twenty‐four percent of those published between 2012 and 2021 is available openly, and only 12% of taxa is represented by digitised type material served from within their native range. We make several recommendations to increase open access to this vital information to support prompt conservation action and future research. Summary We review access to literature and type specimens, key resources for taxonomic research. Takeup of open access (OA) publishing in plant naming is analysed using the International Plant Names Index (IPNI) data (2012–2021), and online availability of specimens analysed using the Global Biodiversity Information Facility (GBIF). Integration of the World Checklist of Vascular Plants (WCVP) taxonomy and distributional data is used to examine regional variation. We found that 23% of vascular plant names are published OA, and 41% are digitally undiscoverable: contained in bibliographic works without a Digital Object Identifier (DOI) or with an unresolvable DOI. The most common OA publishing model used is ‘gold’. We also found that 30% of taxa are represented by a digitised type specimen mobilised from within the continent of their natural range and only 12% from the (more precise) country. We recommend clear article processing charge (APC) waivers for authors from low and middle income countries to better enable ‘gold’ OA and promotion of deposition repositories to better enable ‘green’ OA. Nomenclators should clearly indicate the OA status of literature and mobilise type citation data as material citations to aggregators like GBIF. Names registration systems should promote the capture of code‐recommended elements such as catalogue numbers for type specimens. Digital mobilisation of specimen metadata and images from collections based in low‐ and middle‐income countries must be accelerated to help increase in country taxonomic capacity to document and conserve plant diversity.
主要发生数据(“什么、在哪里、何时”)有助于研究物种分布和多样性,促进应对从粮食安全到减缓气候变化等社会挑战。科学名称整合了信息,并通过参考模式标本而具体化。研究和保护规划需要及时开放这些数据。每年约有2000种维管植物被描述,其中许多是狭窄的地方性物种,面临保护威胁。在2012年至2021年间出版的分类群中,有24%是公开的,只有12%的分类群是由其原生范围内的数字化类型材料代表的。我们提出了一些建议,以增加对这些重要信息的开放获取,以支持及时的保护行动和未来的研究。本文综述了分类研究的主要资源——文献和模式标本。利用国际植物名称索引(IPNI)数据(2012-2021)分析了开放获取(OA)出版在植物命名方面的使用情况,并利用全球生物多样性信息设施(GBIF)分析了标本的在线可用性。结合世界维管植物名录(World Checklist of Vascular Plants, WCVP)的分类和分布数据,研究了维管植物的区域差异。我们发现23%的维管束植物名称是OA出版的,41%是数字无法发现的:包含在没有数字对象标识符(DOI)或无法解析的DOI的书目作品中。最常见的OA发行模式是“黄金”模式。我们还发现,30%的分类群是由从其自然分布范围内的大陆调动来的数字化模式标本代表的,只有12%来自(更精确的)国家。我们建议为来自中低收入国家的作者提供明确的文章处理费(APC)豁免,以更好地实现“黄金”开放获取,并促进沉积库以更好地实现“绿色”开放获取。命名者应明确指出文献的开放获取状态,并将类型引文数据作为材料引文动员到GBIF等聚合器中。名称注册系统应促进获取代码推荐的元素,如类型标本的目录编号。必须加快对低收入和中等收入国家采集的标本元数据和图像进行数字化动员,以帮助提高国家记录和保护植物多样性的分类能力。
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引用次数: 3
Most of the world's largest flowers (genus Rafflesia) are now on the brink of extinction 大多数世界上最大的花(莱佛士属)现在正处于灭绝的边缘
2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2023-09-19 DOI: 10.1002/ppp3.10431
Pastor Malabrigo, Adriane B. Tobias, Joko Witono, Sofi Mursidawati, Agus Susatya, Mat Yunoh Siti‐Munirah, Adhityo Wicaksono, Reza Raihandhany, Sarah Edwards, Chris J. Thorogood
Societal Impact Statement Rafflesia is the genus that contains the world's largest flowers. Despite their global appeal, most of the 42 known species are now at risk of extinction. Urgent action is needed to protect these remarkable flowers. A combined approach to conservation is recommended, including a greater level of habitat protection and support for local community action groups. Rafflesia is a suitable new icon for conservation in the Asian tropics. Summary The genus Rafflesia , which includes the world's largest flowers, has aroused curiosity among scientists for centuries and features prominently in local culture across Southeast Asia. The plant has long been used in ethnobotanical medicine and, more recently, as a source of revenue from ecotourism. But despite its acclaim, Rafflesia remains poorly understood in many respects. Taxonomy is disputed, new species are described each year, and the plant has proven recalcitrant to cultivation. This has hindered conservation, and most of the 42 known species are now severely threatened, yet only one is listed by the International Union for Conservation of Nature (IUCN). We estimate that 60% of Rafflesia species face a severe risk of extinction (equivalent to Critically Endangered [CR]). Moreover, we predict that at least 67% of known habitats fall outside protected areas, exacerbating their vulnerability. Alarmingly, recent observations suggest taxa are still being eradicated before they are even known to science. We present recent scientific discoveries and probable extinctions and highlight case studies of conservation success, with a focus on the role of local people. We propose a multi‐pronged conservation approach combining strengthened taxonomy, ex situ propagation, ecotourism, and an extension of protected areas. We suggest action devolved to local communities and awareness campaigns linked to social media networks will be crucial outside of protected jurisdictions. Finally, we propose to establish Rafflesia as a new icon for plant conservation in the Asian tropics. A combined approach might just save some of the world's most remarkable flowers, most of which are now on the brink of being lost.
莱佛士属是世界上最大的花。尽管它们在全球具有吸引力,但42种已知物种中的大多数现在都面临灭绝的危险。需要采取紧急行动来保护这些非凡的花朵。建议采取一种综合的养护办法,包括加强生境保护和支持地方社区行动团体。莱佛士花是亚洲热带地区保护的一个合适的新标志。莱佛士属(Rafflesia)是世界上最大的花,几个世纪以来一直引起科学家们的好奇,在东南亚的当地文化中占有重要地位。长期以来,这种植物一直被用于民族植物医学,最近,作为生态旅游的收入来源。但是,尽管受到好评,莱佛莱西亚在许多方面仍然知之甚少。分类学存在争议,每年都有新物种被描述,而且该植物已被证明难以种植。这阻碍了保护,42种已知物种中的大多数现在都受到严重威胁,但只有一种被国际自然保护联盟(IUCN)列入名单。我们估计60%的莱佛士属物种面临严重灭绝的风险(相当于极度濒危[CR])。此外,我们预测至少67%的已知栖息地不在保护区范围内,这加剧了它们的脆弱性。令人担忧的是,最近的观察表明,分类群在被科学所知之前就已经灭绝了。我们介绍了最近的科学发现和可能的灭绝,并重点介绍了保护成功的案例研究,重点是当地人的作用。我们提出了一种多管齐下的保护方法,包括加强分类、迁地繁殖、生态旅游和保护区的扩展。我们建议将行动移交给当地社区,在受保护的司法管辖区之外,与社交媒体网络相关的宣传活动将至关重要。最后,我们建议将莱佛士花作为亚洲热带植物保护的新标志。一个综合的方法可能会拯救一些世界上最引人注目的花,其中大多数现在正处于消失的边缘。
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引用次数: 1
Farming cattle in the tropics: Transnational science and industrializing pastures in Brazil 热带地区的养牛:巴西的跨国科学和工业化牧场
2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2023-09-17 DOI: 10.1002/ppp3.10441
Ryan Nehring
Societal Impact Statement Society is increasingly concerned over the environmental impact of diets. Much of this concern is over the environmentally destructive nature of meat production, especially beef and especially in the Amazon. This article aims to understand the production of beef in Brazil through the understudied perspective of forage grasses. In doing so, the article traces who was involved in the importation and improvement of forage grasses in Brazil, why they were involved, and what the consequences of their actions were. By centering forage grasses, we can better understand the potential consequences of seemingly unimportant plant breeding efforts. Summary Beef is viewed by many as one of the more environmentally destructive foods today. Whether it is deforestation in the Amazon or concentrated feedlots, the rancher and the cow have come to epitomize the dangers of a global industrial food system. This article looks at the industrialization of beef cattle from another angle, a bit closer to the ground. It looks at the role and circulation of plants and plant breeders in the expansion of beef cattle in the Brazilian tropics. The article draws on documents collected from the institutional archives of the Brazilian Agricultural Research Corporation, known by its Portuguese acronym Embrapa and the Rockefeller Archive Center. Additional archival documents were acquired by a personal contact. Embrapa was established in 1973, but its archives contain documents from Brazilian agricultural research agencies from as far back as 1952. Documents from the Rockefeller Archive Center include research bulletins and reports from Nelson Rockefeller's IBEC Research Institute (IRI), which conducted research on forage grasses from the 1950s until the 1970s. The article puts forth the argument that imported and improved forage grasses made large‐scale cattle ranching environmentally viable and economically profitable in Brazil. One type of grass in particular, Brachiaria , was central in propelling Brazil as the world's largest producer of beef and underpinning perhaps the most environmentally and socially destructive cattle ranching system in the world. Brachiaria was a key biological and technological input to further entrench longstanding structural inequalities of land ownership. One of the key conclusions of this article is that perspectives from the margins can be illustrative of how seemingly unimportant research (forage grass breeding) can have massive consequences as part of a broader socio‐environmental system.
社会越来越关注饮食对环境的影响。这种担忧主要是关于肉类生产对环境的破坏,尤其是牛肉,尤其是在亚马逊地区。这篇文章的目的是了解牛肉生产在巴西通过饲料草研究不足的角度。在此过程中,文章追溯了谁参与了巴西牧草的进口和改进,他们为什么参与,以及他们的行为的后果是什么。通过以饲草为中心,我们可以更好地理解看似不重要的植物育种努力的潜在后果。牛肉被许多人视为当今最具环境破坏性的食物之一。无论是亚马逊的森林砍伐,还是集中的饲养场,牧场主和奶牛已经成为全球工业化食品体系危险的缩影。本文从另一个更贴近实际的角度来审视肉牛的产业化。它着眼于植物和植物育种者在巴西热带地区肉牛扩张中的作用和循环。这篇文章借鉴了从巴西农业研究公司和洛克菲勒档案中心的机构档案中收集的文件。巴西农业研究公司的葡萄牙语缩写为Embrapa。另外的档案文件是通过个人接触获得的。Embrapa成立于1973年,但其档案中包含的巴西农业研究机构的文件可以追溯到1952年。洛克菲勒档案中心的文件包括纳尔逊·洛克菲勒的IBEC研究所(IRI)的研究公报和报告,该研究所从20世纪50年代到70年代对牧草进行了研究。本文提出的论点是,进口和改良的牧草使巴西大规模养牛在环境上可行,在经济上有利可图。尤其是一种名为Brachiaria的草,它在推动巴西成为世界上最大的牛肉生产国方面发挥了核心作用,并支撑着可能是世界上最具环境和社会破坏性的养牛系统。腕足菌是进一步巩固长期存在的土地所有权结构性不平等的关键生物和技术投入。本文的一个关键结论是,从边缘的角度可以说明看似不重要的研究(牧草育种)如何作为更广泛的社会环境系统的一部分产生巨大的后果。
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引用次数: 0
Ex situ germplasm collections of exceptional species are a vital part of the conservation of Australia's national plant treasures 特殊物种的迁地种质收集是澳大利亚国家植物宝藏保护的重要组成部分
2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2023-09-12 DOI: 10.1002/ppp3.10421
Amelia J. Martyn Yenson, Karen D. Sommerville, Lydia K. Guja, David J. Merritt, Emma L. Dalziell, Tony D. Auld, Linda Broadhurst, David J. Coates, Lucy Commander, Andrew D. Crawford, Nathan J. Emery, Bryn Funnekotter, Zoe Knapp, Robert O. Makinson, Leonie Monks, Damian Wrigley, Catherine A. Offord
Societal Impact Statement Conservation seed banks maintain collections of many seed‐bearing plant species, providing germplasm and data to support management of wild populations. However, a proportion of plant species produce seeds that are difficult to collect, dry, store and utilise; these are known as ‘exceptional’ species. Here we tested a framework for identifying exceptional species, to document examples and provide case studies within the Australian flora. We present a workflow that may be used to identify additional exceptional species, and direct efforts to establish appropriate collection types (seeds and/or living collections, tissue culture or cryopreservation) for their ex situ conservation. Summary Seed banking is well established to contribute to the conservation of many seed‐bearing plant species ex situ for future use in restoration, translocation, agriculture and horticulture. In Australia, over 67% of currently listed threatened plants are represented in conservation seed banks. However, there are challenges to conserving the full extent of plant diversity in seed banks, with growing recognition that we need to think beyond conventional seed banking methods to conserve ‘exceptional’ plant species that are difficult to collect, store and germinate. We examine how the framework for identification of such species can be applied to the Australian flora, using examples from the recently published guidelines for ‘ Plant Germplasm Conservation in Australia ’ and case studies and data arising from the Australian Academy of Science Fenner Conference on the Environment ‘Exceptional Times, Exceptional Plants’ . We present a workflow to assist conservation decision‐makers and practitioners in identifying exceptional species and overcoming barriers to storage of germplasm, enabling appropriate ex situ collection types to be established via seeds, living collections, tissue culture, cryopreservation or a combination of these. Australia's seed conservation sector continues to expand, with increasing expertise, facilities and networks established to conserve a diversity of plant species; however, resolving the challenges relating to each exceptionality factor requires significantly more time, labour and collaboration than current capacity allows. Understanding the barriers to conservation and production of healthy plants, via germination or other methods of propagation, is a critical component of conserving species long‐term and ultimately returning plants to the landscape.
保护种子库保存着许多有种子的植物物种,为支持野生种群的管理提供种质和数据。然而,有一部分植物物种产生的种子难以收集、干燥、储存和利用;这些被称为“特殊”物种。在这里,我们测试了一个识别特殊物种的框架,以记录例子并提供澳大利亚植物区系的案例研究。我们提出了一个工作流程,可用于识别额外的特殊物种,并直接努力建立适当的收集类型(种子和/或活体收集,组织培养或冷冻保存),以进行迁地保护。种子库的建立有助于保护许多非原生境的种子植物物种,以备将来在恢复、迁移、农业和园艺中使用。在澳大利亚,超过67%的濒危植物保存在保护种子库中。然而,在种子库中充分保护植物多样性面临着挑战,越来越多的人认识到我们需要超越传统的种子库方法来保护难以收集、储存和发芽的“特殊”植物物种。我们使用最近出版的“澳大利亚植物种质资源保护”指南中的例子,以及澳大利亚科学院芬纳环境会议“特殊时代,特殊植物”的案例研究和数据,研究了如何将这些物种的识别框架应用于澳大利亚的植物区系。我们提出了一个工作流程,以帮助保护决策者和从业者识别特殊物种,克服种质资源储存的障碍,通过种子、活体收集、组织培养、冷冻保存或这些方法的组合建立合适的非原位收集类型。澳大利亚的种子保护部门继续扩大,为保护植物物种多样性而建立的专业知识、设施和网络不断增加;然而,解决与每个异常因素相关的挑战需要比当前能力所允许的多得多的时间、劳动力和协作。了解通过发芽或其他繁殖方法保护和生产健康植物的障碍,是长期保护物种并最终使植物回归景观的关键组成部分。
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Plants People Planet
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