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Extending the Capabilities of Molecular Force Sensors via DNA Nanotechnology. 通过 DNA 纳米技术扩展分子力传感器的功能。
Q3 Engineering Pub Date : 2020-01-01 DOI: 10.1615/CritRevBiomedEng.2020033450
Susana M Beltrán, Marvin J Slepian, Rebecca E Taylor

At the nanoscale, pushing, pulling, and shearing forces drive biochemical processes in development and remodeling as well as in wound healing and disease progression. Research in the field of mechanobiology investigates not only how these loads affect biochemical signaling pathways but also how signaling pathways respond to local loading by triggering mechanical changes such as regional stiffening of a tissue. This feedback between mechanical and biochemical signaling is increasingly recognized as fundamental in embryonic development, tissue morphogenesis, cell signaling, and disease pathogenesis. Historically, the interdisciplinary field of mechanobiology has been driven by the development of technologies for measuring and manipulating cellular and molecular forces, with each new tool enabling vast new lines of inquiry. In this review, we discuss recent advances in the manufacturing and capabilities of molecular-scale force and strain sensors. We also demonstrate how DNA nanotechnology has been critical to the enhancement of existing techniques and to the development of unique capabilities for future mechanosensor assembly. DNA is a responsive and programmable building material for sensor fabrication. It enables the systematic interrogation of molecular biomechanics with forces at the 1- to 200-pN scale that are needed to elucidate the fundamental means by which cells and proteins transduce mechanical signals.

在纳米尺度上,推力、拉力和剪切力驱动着发育和重塑以及伤口愈合和疾病进展的生化过程。机械生物学领域的研究不仅探讨了这些负荷如何影响生化信号通路,还探讨了信号通路如何通过触发机械变化(如组织的区域僵化)来响应局部负荷。越来越多的人认识到,机械信号和生化信号之间的这种反馈在胚胎发育、组织形态发生、细胞信号传导和疾病发病机制中起着根本性的作用。从历史上看,机械生物学这一跨学科领域是由测量和操纵细胞与分子力的技术发展所推动的,每一种新工具都会带来大量新的研究方向。在这篇综述中,我们将讨论分子尺度力和应变传感器的制造和功能方面的最新进展。我们还展示了 DNA 纳米技术如何对现有技术的提升和未来机械传感器组装独特能力的开发起到关键作用。DNA 是一种反应灵敏、可编程的传感器制造材料。它能利用 1 到 200 pN 级的力对分子生物力学进行系统检测,而这正是阐明细胞和蛋白质传递机械信号的基本方法所需要的。
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引用次数: 0
Jump and Landing Biomechanical Variables and Methods: A Literature Review. 跳跃和落地的生物力学变量和方法:文献综述。
Q3 Engineering Pub Date : 2020-01-01 DOI: 10.1615/CritRevBiomedEng.2020034795
Juan Baus, John R Harry, James Yang

Noncontact lower extremity injuries are commonly related to jumping and landing activities. This review presents an overview of relevant biomechanical variables that can be modified in training to improve jumping performance, landing mechanics, and consequently, reduce injury risks. Relevant studies from the last 2 decades in the Compendex, Pubmed, and Scopus databases were considered for this review. Studies related to jumping and landing kinetics, kinematics, injuries, performance, and/or simulation were included. The use of experimental methods as the drop jump landing and jumping countermovement are widely used to measure biomechanical variables. At the same time, there has been a continuous development of simulation models that could present results without the need for testing on human subjects, with the final objective of exploring the limits of an athlete's performance without increasing the risk of any injury. The most common injuries occur in the knee and ankle ligaments and are directly related to joint angles and moments (i.e., torque or joint loading) at the hip, ankle, and knee joints. Jumping and landing biomechanics are considerably different between male and female subjects for different experimental methods and in both cases, these kinematics factors can be improved over shorter- or longer-time training to develop a better landing strategy.

非接触性下肢损伤通常与跳跃和落地活动有关。这篇综述概述了相关的生物力学变量,这些变量可以在训练中进行修改,以提高跳跃性能、着陆力学,从而降低受伤风险。本综述考虑了Compendex、Pubmed和Scopus数据库中过去20年的相关研究。包括有关跳跃和着陆动力学、运动学、损伤、表现和/或模拟的研究。实验方法的应用,如落体、起跳、落地和跳跃反动作等,被广泛应用于生物力学变量的测量。与此同时,模拟模型也在不断发展,可以在不需要对人体进行测试的情况下呈现结果,最终目标是在不增加任何受伤风险的情况下探索运动员表现的极限。最常见的损伤发生在膝关节和踝关节韧带,并且与髋关节、踝关节和膝关节的关节角度和力矩(即扭矩或关节负荷)直接相关。在不同的实验方法下,男性和女性受试者的跳跃和着陆生物力学有很大的不同,在这两种情况下,这些运动学因素可以通过短时间或长时间的训练来改善,以制定更好的着陆策略。
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引用次数: 4
Novel Approaches of CRISPR-Cas Technology in Airway Diseases. CRISPR-Cas技术在气道疾病中的新方法
Q3 Engineering Pub Date : 2020-01-01 DOI: 10.1615/CritRevBiomedEng.2020034594
Srinivasan Chinnapaiyan, R K Dutta, H J Unwalla

Clustered regularly interspaced palindromic repeats (CRISPR) technique plays a vital role in preclinical modelling of many respiratory diseases. Diseases such as chronic obstructive pulmonary disease (COPD), asthma, acute tracheal bronchitis, pneumonia, tuberculosis, lung cancer, and influenza infection continue to significantly impact human health. CRISPR associated (Cas) proteins, isolated from the immune system of prokaryotes, are one component of a very useful technique to manipulate gene sequences or editing and gene expression with significant implications for respiratory research in the field of molecular biology. CRISPR technology is a promising tool that is easily adaptable for specific editing of DNA sequences of interest with a goal towards modifying or eliminating gene function. Among its many potential applications, CRISPR can be applied to correcting genetic defects as well as for therapeutic approaches for treatment. This review elucidates recent advances in CRISPR-Cas technology in airway diseases.

聚类规则间隔回文重复序列(CRISPR)技术在许多呼吸系统疾病的临床前建模中起着至关重要的作用。慢性阻塞性肺病(COPD)、哮喘、急性气管支气管炎、肺炎、结核病、肺癌和流感感染等疾病继续对人类健康产生重大影响。CRISPR相关(Cas)蛋白是从原核生物的免疫系统中分离出来的,是一种非常有用的基因序列操纵或基因编辑和基因表达技术的一个组成部分,对分子生物学领域的呼吸研究具有重要意义。CRISPR技术是一种很有前途的工具,它很容易适应于对感兴趣的DNA序列进行特定的编辑,目的是修改或消除基因功能。在其众多潜在应用中,CRISPR可以应用于纠正遗传缺陷以及治疗方法。本文综述了CRISPR-Cas技术在气道疾病中的最新进展。
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引用次数: 0
Thermal Monitoring of Tumor and Tissue State during Radiation Therapy - A Complex Case of Radiation Recall. 放射治疗期间肿瘤和组织状态的热监测-一个复杂的放射回忆病例。
Q3 Engineering Pub Date : 2020-01-01 DOI: 10.1615/CritRevBiomedEng.2020034233
Merav A Ben-David, Oshrit Hoffer, Dana Kirshenabum, Eyal Katz, Dror Alezra, Zvi Symon, Tatiana Rabin, Yair Zimmer, Itzhak Kelson, Israel Gannot

Common radiation dermatitis over radiation fields can be mild as minor erythema but can also be associated with blisters and skin desquamation. This phenomenon has been widely investigated and documented, especially in breast cancer patients. Obesity, smoking, and diabetes are known risk factors; however, we cannot predict the severity of radiation dermatitis prior to treatment. The overwhelming radiation recall dermatitis is an acute inflammatory reaction confined to previously irradiated areas that can be triggered when chemotherapy agents are administered after radiotherapy. This rare, painful skin reaction leads to treatment cessation or alteration. In this study, we investigate the feasibility of using thermography as a tool to predict the response of normal breast tissue and skin to radiation therapy and the risk of developing radiation recall dermatitis. Six women with viable in-breast tumor (breast cancer) and eight women who underwent tumor resection (lumpectomy) were monitored by a thermal camera prior to radiotherapy treatment (breast region) and on weekly basis, in the same environmental conditions, through the radiation course of treatment. One patient developed radiation recall dermatitis when treated with chemotherapy following radiation therapy, and needed intensive local treatments and narcotics with full recovery thereafter. Clinical and treatment data as well as response to radiation were collected prospectively. The ongoing thermal changes observed during the radiation treatment for all patients, with and without viable tumor in the breast, were documented, analyzed, and reported here with detailed comparison to the recognized data for the patient diagnosed with radiation recall dermatitis.

常见的辐射皮炎可能是轻微的红斑,但也可能与水疱和皮肤脱屑有关。这种现象已被广泛调查和记录,特别是在乳腺癌患者中。肥胖、吸烟和糖尿病是已知的危险因素;然而,我们无法在治疗前预测放射性皮炎的严重程度。压倒性辐射回忆性皮炎是一种急性炎症反应,局限于先前的照射区域,可在放疗后使用化疗药物时触发。这种罕见的、疼痛的皮肤反应导致治疗停止或改变。在这项研究中,我们探讨了使用热成像作为一种工具来预测正常乳腺组织和皮肤对放射治疗的反应以及发生放射回忆性皮炎的风险的可行性。在放射治疗(乳房区域)前,在相同的环境条件下,通过每周一次的热像仪监测6名存活的乳腺内肿瘤(乳腺癌)和8名接受肿瘤切除术(乳房肿瘤切除术)的妇女,通过放射治疗过程。1例患者放疗后化疗后出现放射回忆性皮炎,需要强化局部治疗和麻醉后完全恢复。前瞻性地收集临床和治疗资料以及对放疗的反应。所有患者在放射治疗期间观察到的持续的热变化,无论有无乳腺存活肿瘤,都被记录、分析和报告,并与诊断为放射回忆性皮炎的患者的公认数据进行了详细的比较。
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引用次数: 2
Magnetic Nanoparticle and Exosomal Therapeutic (M-NEXT) Effects on HIV-Associated Neurotoxicity. 磁性纳米颗粒和外泌体治疗(M-NEXT)对hiv相关神经毒性的影响。
Q3 Engineering Pub Date : 2020-01-01 DOI: 10.1615/CritRevBiomedEng.2020034629
A Caobi, M Andre, J Miles, Asahi Tomitaka, R Nikkhah-Moshaie, A Hernandez, M Nair, Andrea D Raymond

The human immunodeficiency virus (HIV) envelope glycoprotein protein 120 (gp120) induces neurotoxicity associated with HIV-associated neurocognitive disorders (HAND). Mechanism of Gp120-mediated neurotoxicity is primarily apoptosis. Currently, there are no therapeutics that address gp120 neurotoxicity. A biocompatible, efficacious therapeutic that easily crosses the blood-brain barrier (BBB) is needed to treat neuronal toxicity observed in HIV-infected individuals. Magnetic nanoparticles (MNPs) have successfully delivered anti-HIV agents across in vitro BBB transwell model. However, MNPs at high doses may damage cells. Exosomal extracellular vesicles (xEVs) are endogenous nanocarriers capable of crossing the BBB. Unlike MNPs, xEVs interact with cells in a paracrine or juxtracrine manner, lacking long-range site specificity. Here we investigated the efficacy of an MNP and xEV-coupled therapeutic (M-NEXT) as a nanocarrier for targeted delivery of anti-HIV fusion agent across the BBB to inhibit HIV-gp120 associated neuropathology. M-NEXT consisting of MNPs encapsulated within xEV carrying T20 peptide on the surface was synthesized and characterized via zeta potential, dynamic light scattering, and TEM imaging. Preliminary efficacy studies using SH-SY5Y cocultured with the in vitro BBB model showed that the M-NEXT-T20-fusion peptide protected neurons from HIV gp120-mediated neurotoxicity. Additionally, BBB integrity and permeability assessed via trans-endothelial resistance (TEER) and a Dextran-FITC transport assay was unaffected. SH-SY5Y viability measured by XTT assay was not significantly modulated by M-NEXT. In summary, preliminary findings support M-NEXT as effective nanocarriers for delivery of anti-HIV gp120 associated neurotoxicity agents.

人类免疫缺陷病毒(HIV)包膜糖蛋白蛋白120 (gp120)诱导与HIV相关的神经认知障碍(HAND)相关的神经毒性。gp120介导的神经毒性机制主要是细胞凋亡。目前,还没有针对gp120神经毒性的治疗方法。在hiv感染者中观察到的神经毒性需要一种生物相容性的、有效的、容易穿过血脑屏障(BBB)的疗法。磁性纳米颗粒(MNPs)成功地通过体外血脑屏障transwell模型传递抗hiv药物。然而,MNPs在高剂量下可能会损害细胞。外泌体细胞外囊泡(xev)是内源性纳米载体,能够穿过血脑屏障。与MNPs不同,xev以旁分泌或近分泌的方式与细胞相互作用,缺乏远程位点特异性。在这里,我们研究了MNP和xev偶联治疗(M-NEXT)作为靶向递送抗hiv融合剂的纳米载体,通过血脑屏障抑制HIV-gp120相关神经病理的有效性。M-NEXT由包裹在xEV内的MNPs组成,表面携带T20肽,并通过zeta电位、动态光散射和TEM成像对其进行了表征。SH-SY5Y与体外血脑屏障模型共培养的初步疗效研究表明,m - next - t20融合肽保护神经元免受HIV gp120介导的神经毒性。此外,通过跨内皮阻力(TEER)和Dextran-FITC转运试验评估血脑屏障的完整性和通透性不受影响。XTT法测定的SH-SY5Y活力未被M-NEXT显著调节。总之,初步研究结果支持M-NEXT作为抗hiv gp120相关神经毒性药物的有效纳米载体。
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引用次数: 1
Thermal Characterization of Ex Vivo Tissue. 离体组织的热特性。
Q3 Engineering Pub Date : 2020-01-01 DOI: 10.1615/CritRevBiomedEng.2020034068
Bruna R Loiola, Luiz A S Abreu, Helcio R B Orlande

Cancer treatment strategies require mathematical modeling of different coupled phenomena as well as uncertainty quantification of resulting computational solutions. Due to variability in thermophysical tissue properties among individuals, and even for the same individual under different physiological conditions, uncertainties in such parameters must appropriately be taken into account for accurate planning and control of hyperthermia and thermal ablation. The objective of this work is to estimate thermophysical properties of ex vivo tissue, with bovine muscle used for experiments. The Markov chain Monte Carlo method and approximate Bayesian computation algorithm are used to find solutions of the inverse problems examined in this work. These techniques provide a framework for not only solving the inverse problem but also finding uncertainty quantification.

癌症治疗策略需要对不同耦合现象进行数学建模,并对计算结果进行不确定性量化。由于个体间组织热物理特性的可变性,甚至对于处于不同生理条件下的同一个体,必须适当考虑这些参数的不确定性,以便准确规划和控制热疗和热消融。这项工作的目的是估计离体组织的热物理性质,用牛肌肉进行实验。利用马尔可夫链蒙特卡罗方法和近似贝叶斯计算算法求解了本文研究的反问题。这些技术不仅为求解逆问题提供了框架,而且为不确定性的量化提供了框架。
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引用次数: 1
A Review of MRI and Exercise Treatment for Improved Concussion Diagnosis and Recovery. MRI和运动治疗提高脑震荡诊断和康复的综述。
Q3 Engineering Pub Date : 2020-01-01 DOI: 10.1615/CritRevBiomedEng.2020034991
Ethan Danielli, Carol DeMatteo, Geoffrey B Hall, Michael D Noseworthy

Concussions are a major health concern due to the unpredictable onset and resolution of debilitating post-concussion symptoms. This review discusses physiological, structural and functional brain changes post-concussion, novel non-invasive medical imaging techniques to improve diagnosis, and the role exercise could play in concussion recovery. After sustaining a concussion, about 50% of youth and 20% of adults have symptoms that last for more than a month. Understanding concussion severity has become consequential in recent years as professional sports leagues have acknowledged their harmful short- and long-term effects. Despite these effects, concussed children and adults continue to return to activity and sport prior to a full recovery. This premature return can be enabled because routine clinical medical imaging techniques are unable to detect post-concussion brain damage. However, there have been advances in MRI approaches that clearly indicate brain damage due to concussion. In terms of recovery, rest has been the long-standing prescribed concussion treatment; however, subsymptom exacerbating exercise has been shown to be a safe and effective treatment option. Novel controlled aerobic exercise interventions have improved concussion outcomes by reducing recovery time and symptom severity.

脑震荡是一个主要的健康问题,由于不可预测的发作和衰弱的脑震荡后症状的解决。本文综述了脑震荡后大脑的生理、结构和功能变化,新的无创医学成像技术,以提高诊断,以及运动在脑震荡恢复中的作用。在遭受脑震荡后,大约50%的年轻人和20%的成年人会出现持续一个多月的症状。近年来,随着职业体育联盟承认脑震荡对短期和长期的有害影响,了解脑震荡的严重程度已经变得至关重要。尽管有这些影响,脑震荡的儿童和成人在完全康复之前继续恢复活动和运动。由于常规的临床医学成像技术无法检测脑震荡后的脑损伤,这种过早的恢复是可能的。然而,核磁共振成像方法已经取得了进展,可以清楚地显示脑震荡造成的脑损伤。在恢复方面,休息是长期以来规定的脑震荡治疗方法;然而,亚症状加重运动已被证明是一种安全有效的治疗选择。新型可控有氧运动干预通过减少恢复时间和症状严重程度改善脑震荡结果。
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引用次数: 4
Fractional Calculus Models of Magnetic Resonance Phenomena: Relaxation and Diffusion. 磁共振现象的分数阶微积分模型:松弛和扩散。
Q3 Engineering Pub Date : 2020-01-01 DOI: 10.1615/CritRevBiomedEng.2020033925
Richard L Magin, Matt G Hall, M Muge Karaman, Viktor Vegh

Applications of fractional calculus in magnetic resonance imaging (MRI) have increased over the last twenty years. From the mathematical, computational, and biophysical perspectives, fractional calculus provides new tools for describing the complexity of biological tissues (cells, organelles, membranes and macromolecules). Specifically, fractional order models capture molecular dynamics (transport, rotation, and vibration) by incorporating power law convolution kernels into the time and space derivatives appearing in the equations that govern nuclear magnetic resonance (NMR) phenomena. Hence, it is natural to expect fractional calculus models of relaxation and diffusion to be applied to problems in NMR and MRI. Early studies considered the fractal dimensions of multi-scale materials in the non-linear growth of the mean squared displacement, assumed power-law decays of the spectral density, and suggested stretched exponential signal relaxation to describe non-Gaussian behavior. Subsequently, fractional order generalization of the Bloch, and Bloch-Torrey equations were developed to characterize NMR (and MRI) relaxation and diffusion. However, even for simple geometries, analytical solutions of fractional order equations in time and space are difficult to obtain, and predictions of the corresponding changes in image contrast are not always possible. Currently, a multifaceted approach using coarse graining, simulation, and accelerated computation is being developed to identify 'imaging' biomarkers of disease. This review surveys the principal fractional order models used to describe NMR and MRI phenomena, identifies connections and limitations, and finally points to future applications of the approach.

分数微积分在磁共振成像(MRI)中的应用在过去的二十年中有所增加。从数学、计算和生物物理的角度来看,分数微积分为描述生物组织(细胞、细胞器、膜和大分子)的复杂性提供了新的工具。具体来说,分数阶模型通过将幂律卷积核合并到控制核磁共振(NMR)现象的方程中的时间和空间导数中来捕获分子动力学(输运、旋转和振动)。因此,期望分数阶微积分松弛和扩散模型应用于核磁共振和核磁共振中的问题是很自然的。早期的研究考虑了多尺度材料在均方位移非线性增长中的分形维数,假设了谱密度的幂律衰减,并提出了拉伸指数信号松弛来描述非高斯行为。随后,Bloch和Bloch- torrey方程的分数阶泛化被开发用于表征NMR(和MRI)弛豫和扩散。然而,即使对于简单的几何,分数阶方程在时间和空间上的解析解也很难获得,并且预测图像对比度的相应变化并不总是可能的。目前,正在开发一种使用粗粒度、模拟和加速计算的多方面方法来识别疾病的“成像”生物标志物。本文综述了用于描述核磁共振和MRI现象的主要分数阶模型,确定了联系和局限性,最后指出了该方法的未来应用。
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引用次数: 12
Development and Challenges of Nanotherapeutic Formulations for Targeting Mitochondrial Cell Death Pathways in Lung and Brain Degenerative Diseases. 针对肺和脑退行性疾病线粒体细胞死亡途径的纳米治疗配方的发展和挑战。
Q3 Engineering Pub Date : 2020-01-01 DOI: 10.1615/CritRevBiomedEng.2020034546
Marko Manevski, Dinesh Devadoss, Ruben Castro, Lauren Delatorre, Adriana Yndart, Rahul D Jayant, Madhavan Nair, Hitendra S Chand

Mitochondria are among the most dynamic organelles regulating a wide array of cellular processes. They are the cellular hub for oxidative phosphorylation, energy production, and cellular metabolism, and they are important determinants of cell fate, as they control cell death/survival pathways. The mitochondrial network plays a critical role in cellular inflammatory responses, and mitochondria are central in many pathologic conditions such as chronic inflammatory and aging-associated degenerative diseases. Recent advancements in our understanding of the pathogenic pathways and the role of mitochondria therein have identified highly specific therapeutic targets in order to develop personalized nanomedicine approaches for treatment. A wide array of nanoparticle-based formulations has been employed for potential usage in both diagnosing and treating chronic and fatal conditions, with gold nanoparticles and liposomal encapsulation being of particular interest. In this review, we highlight and summarize the advantages and challenges of developing these nanoformulations for targeted and spatiotemporally controlled drug delivery. We discuss the potential of nanotherapy in neoplasms to target the mitochondrial regulated cell death pathways and recent seminal developments in liposomal nanotherapy against chronic inflammatory lung diseases. The need for further development of nanoparticle-based treatment options for neuroinflammatory and neurodegenerative conditions, such as Alzheimer's disease (AD), is also discussed.

线粒体是调节多种细胞过程的最具活力的细胞器之一。它们是细胞氧化磷酸化、能量产生和细胞代谢的中枢,也是细胞命运的重要决定因素,因为它们控制着细胞死亡/生存途径。线粒体网络在细胞炎症反应中起着至关重要的作用,线粒体在许多病理条件中起着中心作用,如慢性炎症和衰老相关的退行性疾病。最近我们对致病途径和线粒体在其中的作用的理解取得了进展,已经确定了高度特异性的治疗靶点,以便开发个性化的纳米医学治疗方法。广泛的基于纳米颗粒的配方已被用于诊断和治疗慢性和致命疾病的潜在用途,其中金纳米颗粒和脂质体包封特别令人感兴趣。在这篇综述中,我们强调并总结了开发这些纳米制剂用于靶向和时空控制药物递送的优势和挑战。我们讨论了纳米疗法在肿瘤中的潜力,以线粒体调节的细胞死亡途径为目标,以及最近在脂质体纳米疗法治疗慢性炎症性肺部疾病方面的重大进展。本文还讨论了进一步开发基于纳米颗粒的神经炎症和神经退行性疾病(如阿尔茨海默病(AD))治疗方案的必要性。
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引用次数: 3
Potential Applications of Silk Fibroin as Vascular Implants: A Review. 丝素蛋白作为血管植入物的潜在应用综述
Q3 Engineering Pub Date : 2019-01-01 DOI: 10.1615/CritRevBiomedEng.2019030527
Melissa Puerta, Y Montoya, J Bustamante, A Restrepo-Osorio

Cardiovascular disease is a worldwide main cause of morbidity and mortality. Treatment alternatives include the use of cardiovascular implants that have generated a constant search for materials, and transformation processes that provide structures similar to those that need to be replaced. Among the biomaterials available for vascular implants, silk fibroin (SF) is of great interest because it is a natural, biodegradable, biocompatible protein. In addition, SF has outstanding mechanical properties and can be easily processed by various techniques. This article presents a general review of SF, its potential use as a biomaterial for vascular applications, and modifications that improve its hemocompatibility.

心血管疾病是世界范围内发病率和死亡率的主要原因。治疗方案包括使用心血管植入物,这种植入物产生了不断寻找材料的过程,以及提供与需要替换的结构相似的转化过程。在可用于血管植入的生物材料中,丝素蛋白(SF)因其是一种天然的、可生物降解的、生物相容性好的蛋白质而备受关注。此外,SF具有优异的力学性能,可以很容易地通过各种技术进行加工。本文介绍了SF的一般综述,其作为血管应用生物材料的潜在用途,以及改善其血液相容性的修饰。
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引用次数: 4
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