Pub Date : 2023-11-28DOI: 10.1080/24701394.2023.2274094
Andrés R. Domingos, Abner Carvalho-Batista, Rafael Robles, Marlene S. Arcifa, Fernando L. Mantelatto
We developed species-specific primers of five microcrustacean preys, Ceriodaphnia richardi, Diaphanosoma cf. brevireme, Daphnia gessneri, Simocephalus serrulatus, Thermocyclops decipiens and Mesocy...
{"title":"Evaluating food web interactions among microcrustaceans and insect in a tropical shallow lake using DNA-based protocol","authors":"Andrés R. Domingos, Abner Carvalho-Batista, Rafael Robles, Marlene S. Arcifa, Fernando L. Mantelatto","doi":"10.1080/24701394.2023.2274094","DOIUrl":"https://doi.org/10.1080/24701394.2023.2274094","url":null,"abstract":"We developed species-specific primers of five microcrustacean preys, Ceriodaphnia richardi, Diaphanosoma cf. brevireme, Daphnia gessneri, Simocephalus serrulatus, Thermocyclops decipiens and Mesocy...","PeriodicalId":54298,"journal":{"name":"Mitochondrial Dna Part a","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-11-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138533086","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-11-28DOI: 10.1080/24701394.2023.2276749
Yanzhen Du, Kangkang Han, Xiaoqi Zeng, Gang Ni
The starfish Asterias amurensis is a marine pest native to the northwestern Pacific and has successfully invaded southern Australia. Asterias amurensis have caused substantial environmental and eco...
{"title":"Characterization and comparison of the mitochondrial genomes of the sea star Asterias amurensis (Echinodermata: Asteroidea) in East Asia","authors":"Yanzhen Du, Kangkang Han, Xiaoqi Zeng, Gang Ni","doi":"10.1080/24701394.2023.2276749","DOIUrl":"https://doi.org/10.1080/24701394.2023.2276749","url":null,"abstract":"The starfish Asterias amurensis is a marine pest native to the northwestern Pacific and has successfully invaded southern Australia. Asterias amurensis have caused substantial environmental and eco...","PeriodicalId":54298,"journal":{"name":"Mitochondrial Dna Part a","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-11-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138533101","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-10-17DOI: 10.1080/24701394.2023.2263565
Karla Isela Arroyo-Zúñiga, Jasmín Granados-Amores, Deivis Samuel Palacios-Salgado, Viridiana Peraza-Gómez, Fausto Valenzuela-Quiñonez
The chilhuil sea catfish (Bagre panamensis) is an ecologically relevant species contributing to the structure, organization, and functioning of the ecosystems it inhabits. Also, it is an important ...
{"title":"Genetic diversity, population structure, and demographic history of the chilhuil sea catfish Bagre panamensis in Northwestern Mexico inferred from mitochondrial DNA","authors":"Karla Isela Arroyo-Zúñiga, Jasmín Granados-Amores, Deivis Samuel Palacios-Salgado, Viridiana Peraza-Gómez, Fausto Valenzuela-Quiñonez","doi":"10.1080/24701394.2023.2263565","DOIUrl":"https://doi.org/10.1080/24701394.2023.2263565","url":null,"abstract":"The chilhuil sea catfish (Bagre panamensis) is an ecologically relevant species contributing to the structure, organization, and functioning of the ecosystems it inhabits. Also, it is an important ...","PeriodicalId":54298,"journal":{"name":"Mitochondrial Dna Part a","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-10-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138533112","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-09-14DOI: 10.1080/24701394.2023.2245896
Divino Bruno da Cunha, Kely Cristina Piedade Martins, José Nazareno do Santos Júnior, Edith Cibelle de Oliveira Moreira, Iracilda Sampaio, Cleonilde da Conceição Silva Queiroz, Maria Adriana Leite, Agerdânio Andrade de Souza, Carolina Aviz dos Santos, Marcelo Vallinoto
The Serra Spanish mackerel, Scomberomorus brasiliensis, is one of the most important fishery resources in the western tropical Atlantic, including northern and eastern Brazil. Despite its economic ...
{"title":"High genetic diversity detected in the mitochondrial Control Region of the Serra Spanish Mackerel, Scomberomorus brasiliensis (Collette, Russo & Zavala, 1978) along the Brazilian coast","authors":"Divino Bruno da Cunha, Kely Cristina Piedade Martins, José Nazareno do Santos Júnior, Edith Cibelle de Oliveira Moreira, Iracilda Sampaio, Cleonilde da Conceição Silva Queiroz, Maria Adriana Leite, Agerdânio Andrade de Souza, Carolina Aviz dos Santos, Marcelo Vallinoto","doi":"10.1080/24701394.2023.2245896","DOIUrl":"https://doi.org/10.1080/24701394.2023.2245896","url":null,"abstract":"The Serra Spanish mackerel, Scomberomorus brasiliensis, is one of the most important fishery resources in the western tropical Atlantic, including northern and eastern Brazil. Despite its economic ...","PeriodicalId":54298,"journal":{"name":"Mitochondrial Dna Part a","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138533090","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-09-05DOI: 10.1080/24701394.2023.2251577
Tabitha Cady, Katherine E. Bemis, J. Antonio Baeza
The Spiny Butterfly Ray, Gymnura altavela, is found in tropical and temperate coastal waters with a discontinuous distribution: it occurs along the east coast of the United States of America, Brazi...
{"title":"The mitochondrial genome of the endangered Spiny Butterfly Ray Gymnura altavela (Linnaeus 1758) (Myliobatiformes: Gymnuridae) provides insights into cryptic lineages","authors":"Tabitha Cady, Katherine E. Bemis, J. Antonio Baeza","doi":"10.1080/24701394.2023.2251577","DOIUrl":"https://doi.org/10.1080/24701394.2023.2251577","url":null,"abstract":"The Spiny Butterfly Ray, Gymnura altavela, is found in tropical and temperate coastal waters with a discontinuous distribution: it occurs along the east coast of the United States of America, Brazi...","PeriodicalId":54298,"journal":{"name":"Mitochondrial Dna Part a","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138533087","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-02-21DOI: 10.1080/24701394.2022.2041626
Yılmaz Çiftci, Oğuzhan Eroğlu, Şirin Firidin, Hacı Savaş, Yusuf Bektaş
Genetic diversity, genetic structure, and demographic history of the endemic and endangered cyprinid species Alburnus tarichi based on samples from 17 populations consisting of resident and potamod...
{"title":"Genetic structure and demographic history of endangered Alburnus tarichi (Güldenstädt, 1814) populations from Lake Van basin in Turkey inferred from mtDNA analyses","authors":"Yılmaz Çiftci, Oğuzhan Eroğlu, Şirin Firidin, Hacı Savaş, Yusuf Bektaş","doi":"10.1080/24701394.2022.2041626","DOIUrl":"https://doi.org/10.1080/24701394.2022.2041626","url":null,"abstract":"Genetic diversity, genetic structure, and demographic history of the endemic and endangered cyprinid species Alburnus tarichi based on samples from 17 populations consisting of resident and potamod...","PeriodicalId":54298,"journal":{"name":"Mitochondrial Dna Part a","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2022-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138533088","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-02-09DOI: 10.1080/24701394.2021.2024814
Samara Videira Zorzato, Amir Yassin, Lilian Madi-Ravazzi
Pleistocene climatic changes have played a major role in the evolution of Brazilian Atlantic Forest and South America biodiversity but their impacts on the genetic structure of widely distributed s...
{"title":"Signature of climatic differentiation on mitochondrial DNA of Drosophila sturtevanti","authors":"Samara Videira Zorzato, Amir Yassin, Lilian Madi-Ravazzi","doi":"10.1080/24701394.2021.2024814","DOIUrl":"https://doi.org/10.1080/24701394.2021.2024814","url":null,"abstract":"Pleistocene climatic changes have played a major role in the evolution of Brazilian Atlantic Forest and South America biodiversity but their impacts on the genetic structure of widely distributed s...","PeriodicalId":54298,"journal":{"name":"Mitochondrial Dna Part a","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2022-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138507243","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2020-01-01DOI: 10.1007/978-1-0716-0274-4
H. R. Dash, P. Shrivastava, Surajit Das
{"title":"Principles and Practices of DNA Analysis: A Laboratory Manual for Forensic DNA Typing","authors":"H. R. Dash, P. Shrivastava, Surajit Das","doi":"10.1007/978-1-0716-0274-4","DOIUrl":"https://doi.org/10.1007/978-1-0716-0274-4","url":null,"abstract":"","PeriodicalId":54298,"journal":{"name":"Mitochondrial Dna Part a","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81717654","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2019-12-08DOI: 10.1080/24701394.2019.1698558
Taiming Yan, Xiongyan Wang, Song Li, Zhi He, Jie Luo, Qian Zhang, Deying Yang, Zhi He
Abstract Biodiversity is threatened by several factors that are often associated with overfishing, water pollution and hydroelectric dams, among other environmental impacts. The present study aimed to evaluate the genetic aspects of wild groups of Ancherythroculter nigrocauda using the mitochondrial cytochrome c oxidase subunit I (coI) and cytochrome b (cytb) genes and the d-loop region. We collected 89 representative individuals from three geographically distinct ranges of the Upper Yangtze River, including the Longxi River (LOR), Laixi River (LAR), and Hejiang range of the Yangtze River (HJ). The genetic analysis results showed that the three populations of A. nigrocauda had high levels of haplotype diversity (0.3434–0.951) and low levels of nucleotide diversity (0.00074–0.00412) based on the single gene sequences and the combination of gene sequences. Haplotype genealogy showed that only one haplotype (Hap-2) was shared by these three geographic groups, and 2–3 were shared by two groups; the other haplotypes were group-specific. The genetic distance within and between the populations was low; however, most of the molecular variance came from within the populations. Furthermore, high gene flow (>1.0) was found in HJ vs LOR and HJ vs LAR based on the d-loop region sequence and combination. These results suggested that there was a decrease in the degree of A. nigrocauda genetic diversity in the upper Yangtze River, and the genetic protection of the populations should be highlighted in the future.
生物多样性受到几个因素的威胁，这些因素通常与过度捕捞、水污染和水电站大坝以及其他环境影响有关。本研究旨在利用线粒体细胞色素c氧化酶亚基I (coI)和细胞色素b (cytb)基因和d-环区对黑绒螯蟹野生群的遗传方面进行评价。我们从长江上游的陇西、莱西和合江三个地理位置不同的河段收集了89个具有代表性的个体。遗传分析结果表明，3个居群单倍型多样性较高(0.3434 ~ 0.951)，核苷酸多样性较低(0.00074 ~ 0.00412)。单倍型家谱显示，3个地理类群共有1个单倍型(Hap-2)， 2个地理类群共有2-3个单倍型;其他单倍型是群体特异性的。居群内部和居群之间的遗传距离较低;然而，大多数分子变异来自群体内部。此外，基于d环区序列和组合，HJ vs LOR和HJ vs LAR的基因流量较高(>1.0)。这些结果表明，长江上游地区黑梭子蟹种群的遗传多样性呈下降趋势，今后应加强对黑梭子蟹种群的遗传保护。
{"title":"Genetic analysis of wild Ancherythroculter nigrocauda in tributaries and the main stream of the upper Yangtze River basin of China","authors":"Taiming Yan, Xiongyan Wang, Song Li, Zhi He, Jie Luo, Qian Zhang, Deying Yang, Zhi He","doi":"10.1080/24701394.2019.1698558","DOIUrl":"https://doi.org/10.1080/24701394.2019.1698558","url":null,"abstract":"Abstract Biodiversity is threatened by several factors that are often associated with overfishing, water pollution and hydroelectric dams, among other environmental impacts. The present study aimed to evaluate the genetic aspects of wild groups of Ancherythroculter nigrocauda using the mitochondrial cytochrome c oxidase subunit I (coI) and cytochrome b (cytb) genes and the d-loop region. We collected 89 representative individuals from three geographically distinct ranges of the Upper Yangtze River, including the Longxi River (LOR), Laixi River (LAR), and Hejiang range of the Yangtze River (HJ). The genetic analysis results showed that the three populations of A. nigrocauda had high levels of haplotype diversity (0.3434–0.951) and low levels of nucleotide diversity (0.00074–0.00412) based on the single gene sequences and the combination of gene sequences. Haplotype genealogy showed that only one haplotype (Hap-2) was shared by these three geographic groups, and 2–3 were shared by two groups; the other haplotypes were group-specific. The genetic distance within and between the populations was low; however, most of the molecular variance came from within the populations. Furthermore, high gene flow (>1.0) was found in HJ vs LOR and HJ vs LAR based on the d-loop region sequence and combination. These results suggested that there was a decrease in the degree of A. nigrocauda genetic diversity in the upper Yangtze River, and the genetic protection of the populations should be highlighted in the future.","PeriodicalId":54298,"journal":{"name":"Mitochondrial Dna Part a","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2019-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89144945","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2019-12-04DOI: 10.1080/24701394.2019.1695788
Mohammad Mehdi Jahani, Azita Azimi Meibody, Talie Karimi, M. Banoei, M. Houshmand
Abstract Breast cancer is the most common malignancy and the second leading cause of cancer deaths among women worldwide after lung cancer. Mitochondria play a central role in the regulation of cellular function, metabolism, and cell death in cancer cells. We aim to examine the mitochondrial polymorphisms of complex I in association with breast cancer in an Iranian cohort. This experimental study includes 53 patients with breast cancer and 35 healthy control patients. In addition, tumor-adjacent normal breast tissue was obtained from each patient. The DNA of the tissue cells was extracted and analyzed for complex I mutations using a PCR sequencing method. Our results show 94 mtDNA complex I variants in tumor tissues. A10398G was the most prevalent polymorphism and strongly correlated with Her2 receptor in tumor tissue samples. Mitochondrial DNA (mtDNA) mutations have been widely linked to the etiology of numerous disorders. The mtDNA mutations screening on A10398G along with other mutations might provide insight on the role of mitochondrial mutations in breast cancer.
{"title":"An A10398G mitochondrial DNA alteration is related to increased risk of breast cancer, and associates with Her2 positive receptor","authors":"Mohammad Mehdi Jahani, Azita Azimi Meibody, Talie Karimi, M. Banoei, M. Houshmand","doi":"10.1080/24701394.2019.1695788","DOIUrl":"https://doi.org/10.1080/24701394.2019.1695788","url":null,"abstract":"Abstract Breast cancer is the most common malignancy and the second leading cause of cancer deaths among women worldwide after lung cancer. Mitochondria play a central role in the regulation of cellular function, metabolism, and cell death in cancer cells. We aim to examine the mitochondrial polymorphisms of complex I in association with breast cancer in an Iranian cohort. This experimental study includes 53 patients with breast cancer and 35 healthy control patients. In addition, tumor-adjacent normal breast tissue was obtained from each patient. The DNA of the tissue cells was extracted and analyzed for complex I mutations using a PCR sequencing method. Our results show 94 mtDNA complex I variants in tumor tissues. A10398G was the most prevalent polymorphism and strongly correlated with Her2 receptor in tumor tissue samples. Mitochondrial DNA (mtDNA) mutations have been widely linked to the etiology of numerous disorders. The mtDNA mutations screening on A10398G along with other mutations might provide insight on the role of mitochondrial mutations in breast cancer.","PeriodicalId":54298,"journal":{"name":"Mitochondrial Dna Part a","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2019-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"73934531","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
京公网安备 11010802042870号
京ICP备2023020795号-1
扫码关注我们
求助内容：
应助结果提醒方式：