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Phillygenin alleviated arthritis through the inhibition of NLRP3 inflammasome and Ferroptosis by AMPK 菲利根因通过抑制 NLRP3 炎症小体和 AMPK 的铁凋亡缓解关节炎
IF 1.3 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-02-01 DOI: 10.1615/critrevimmunol.2024051467
Jianghui Wang, Shufang Ni, Kai Zheng, Yan Zhao, peihong zhang, Hong Chang
Background: We investigated the potential arthritis-inducing effects of Phillygenin and its underlying mechanisms.Methods: RAW264.7 cells were stimulated with lipopolysaccharide to induce inflammation.Results: Phillygenin was found to reduce arthritis score, histopathological changes, paw edema, spleen index, and ALP levels in a dose-dependent manner in a model of arthritis. Additionally, Phillygenin was able to decrease levels of inflammation markers in serum samples of mice with arthritis and also inhibited inflammation markers in the cell supernatant of an in vitro model of arthritis. Phillygenin increased cell viability and JC-1 disaggregation, enhanced calcien-AM/CoCl2, reduced LDH activity levels and IL-1α levels, and inhibited Calcein/PI levels and iron concentration in an in vitro model. Phillygenin was also found to reduce ROS-induced oxidative stress and Ferroptosis, and suppress the NLRP3 inflammasome in both in vivo and in vitro models through AMPK. In the in vivo model, Phillygenin was observed to interact with AMPK protein.Conclusions: These findings suggest that Phillygenin may be a potential therapeutic target for preventing arthritis by inhibiting NLRP3 inflammasome and Ferroptosis through AMPK. This indicates that Phillygenin could have disease-modifying effects on arthritis.
背景方法:用脂多糖刺激RAW264.7细胞诱发炎症:方法:用脂多糖刺激 RAW264.7 细胞诱发炎症:结果:在关节炎模型中,Phillygenin能以剂量依赖的方式降低关节炎评分、组织病理学变化、爪水肿、脾脏指数和ALP水平。此外,菲利根因还能降低关节炎小鼠血清样本中的炎症标志物水平,并抑制体外关节炎模型细胞上清液中的炎症标志物。在体外模型中,Phillygenin 能提高细胞活力和 JC-1 分解,增强钙离子-AM/CoCl2,降低 LDH 活性水平和 IL-1α 水平,抑制 Calcein/PI 水平和铁浓度。研究还发现,在体内和体外模型中,Phillygenin 还能通过 AMPK 减少 ROS 诱导的氧化应激和铁氧化,并抑制 NLRP3 炎性体。在体内模型中,观察到菲利根因与 AMPK 蛋白相互作用:这些研究结果表明,Phillygenin 可通过 AMPK 抑制 NLRP3 炎性体和铁氧化酶,从而成为预防关节炎的潜在治疗靶点。结论:这些研究结果表明,Phillygenin 可通过 AMPK 抑制 NLRP3 炎症蛋白酶体和铁氧化酶,从而成为预防关节炎的潜在治疗靶点。
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引用次数: 0
The Current and Future States of Natural Killer Cell-Based Immunotherapy in Hepatocellular Carcinoma 基于自然杀伤细胞的肝细胞癌免疫疗法的现状与未来
IF 1.3 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-02-01 DOI: 10.1615/critrevimmunol.2024052486
Tu Nguyen, Po-Chun Chen, Janet Pham, Kawaljit Kaur, Steven Raman, Anahid Jewett, Jason Chiang
Natural killer (NK) cells are innate lymphoid cells that exhibit high levels of cytotoxicity against NK-specific targets, produce various cytokines, and interact with T cells, B cells, and dendritic cells to effectively serve as frontliners of the innate immune system. Moreover, NK cells constitue the second most frequent immune cell in the liver. These properties have drawn significant attention towards leveraging NK cells in treating liver cancer, especially hepatocellular carcinoma (HCC), which accounts for 75% of all liver cancer and is the fourth leading cause of cancer-related death worldwide. Notable anti-cancer functions of NK cells against HCC include activating antibody-dependent cell cytotoxicity (ADCC), facilitating Gasdermin E-mediated pyroptosis of HCC cells, and initiating an antitumor response via the cGAS-STING signaling pathway. In this review, we describe how these mechanisms work in the context of HCC. We will then discuss the existing preclinical and clinical studies that leverage NK cell activity to create single and combined immunotherapies.
自然杀伤(NK)细胞是一种先天性淋巴细胞,对 NK 特异性靶点具有高水平的细胞毒性,能产生各种细胞因子,并能与 T 细胞、B 细胞和树突状细胞相互作用,有效地充当先天性免疫系统的前线。此外,NK 细胞是肝脏中第二常见的免疫细胞。肝癌占所有肝癌的 75%,是全球癌症相关死亡的第四大原因。NK 细胞对 HCC 的显著抗癌功能包括激活抗体依赖性细胞毒性(ADCC)、促进 Gasdermin E 介导的 HCC 细胞热解,以及通过 cGAS-STING 信号通路启动抗肿瘤反应。在本综述中,我们将介绍这些机制如何在 HCC 中发挥作用。然后,我们将讨论现有的临床前和临床研究,这些研究利用 NK 细胞的活性创造了单一和联合免疫疗法。
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引用次数: 0
Efficacy and Nuances of Precision Molecular Engineering for Hodgkin's Disease to a Gene Therapeutic Approach 精确分子工程治疗霍奇金病到基因治疗方法的疗效和细微差别
IF 1.3 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-02-01 DOI: 10.1615/critrevimmunol.2024052378
Muhammad Imran Qadir, Bilal Ahmed, Nadir Hussain
Gene therapy is a particularly useful treatment for nervous system genetic illnesses, including those induced especially by infectious organisms and antigens, and is being utilized to treat Hodgkin's disease. Due to the possible clonal relationship between both disorders, immunotherapy directed against CD20 positive cells may be a more effective treatment in patients with persistent HD and NHL.HL growth can be inhibited both in vitro and in vivo by AdsIL-13Ralpha2. High-dose treatment combined with stem cell transplantation has been effective in treating HIV-negative lymphoma that has progressed to high-risk or relapsed illness. For therapy, LMP2-specific CTL will be used. Furthermore, it is possible to view the cytotoxicity of genetically modified adenoviruses that express proteins such as p27Kip1, p21Waf1, and p16INK4A as a foundational element for (2;5)-derived ALCL genetic treatment for Hodgkin's disease
基因疗法是治疗神经系统遗传疾病(包括由传染性生物体和抗原诱发的疾病)的一种特别有效的方法,目前正被用于治疗霍奇金病。由于这两种疾病之间可能存在克隆关系,针对 CD20 阳性细胞的免疫疗法可能是治疗顽固性 HD 和 NHL 患者的更有效方法。AdsIL-13Ralpha2 可在体外和体内抑制 HL 的生长。大剂量治疗结合干细胞移植对治疗进展为高危或复发的HIV阴性淋巴瘤很有效。在治疗中,将使用 LMP2 特异性 CTL。此外,还可以将表达p27Kip1、p21Waf1和p16INK4A等蛋白的转基因腺病毒的细胞毒性视为(2;5)衍生ALCL基因治疗霍奇金病的基础要素
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引用次数: 0
Identification of a Novel Five-Gene Prognostic Model for Laryngeal Cancer Associated with Mitophagy Using Integrated Bioinformatics Analysis and Experimental Verification 利用综合生物信息学分析和实验验证确定与丝裂噬相关的喉癌五基因预测模型
IF 1.3 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.1615/critrevimmunol.2024051787
Dong Song, Lun Dong, Mei Wang, Xiaoping Gao
Laryngeal cancer (LC) is a prevailing tumor with a high mortality rate. The pivotal role of mitophagy in LC is acknowledged; however, a comprehensive analysis of the corresponding genes has not been conducted. In the present study, we proposed a prognostic model consisting of mitophagy-related genes in LC. Clinical information and transcriptome profiling of patients with LC and mitophagy-related genes were retrieved from open-source databases. Gene set variation analysis (GSVA) and Weighted Gene Co-expression Network Analysis (WGCNA) were used to identify core mitophagy-related genes and construct gene co-expression networks. Functional enrichment analysis was employed to analyze the enriched regulatory pathways of the mitophagy-related genes. Kaplan-Meier curves (KM), Cox, and LASSO regression were applied to explore their prognostic effects. Finally, quantitative real-time PCR (RT-qPCR) further verified the bioinformatics prediction. A total of 45 genes related to mitochondrial pathways was collected. GSVA analysis demonstrated that these genes in tumor samples mainly referred to the mitochondrial pathway. Among these genes, five mitophagy-related-gene signatures (CERCAM, CHPF, EPHX3, EXT2, and MED15) were further identified to construct the prognostic model. KM and Cox regression analyses indicated that this model had an accurate prognostic prediction for LC. RT-qPCR showed that CERCAM, CHPF, EXT2, and MED15 expression were upregulated, and EPHX3 level was decreased in LC cells. The present study established a five-mitophagy-related-gene model that can predict the prognosis of LC patients, thus laying the foundation for a better understanding and potential advancements in clinical treatments for LC.
喉癌(LC)是一种死亡率很高的常见肿瘤。有丝分裂在喉癌中的关键作用已得到公认,但尚未对相应基因进行全面分析。在本研究中,我们提出了一个由 LC 中有丝分裂相关基因组成的预后模型。我们从开源数据库中检索了 LC 患者的临床信息和转录组图谱,以及有丝分裂相关基因。利用基因组变异分析(GSVA)和加权基因共表达网络分析(WGCNA)确定有丝分裂相关的核心基因并构建基因共表达网络。功能富集分析用于分析有丝分裂相关基因的富集调控通路。应用Kaplan-Meier曲线(KM)、Cox和LASSO回归来探讨它们的预后效应。最后,实时定量 PCR(RT-qPCR)进一步验证了生物信息学预测。研究共收集了 45 个与线粒体通路相关的基因。GSVA分析表明,肿瘤样本中的这些基因主要涉及线粒体通路。在这些基因中,进一步确定了五个与线粒体吞噬相关的基因特征(CERCAM、CHPF、EPHX3、EXT2 和 MED15),以构建预后模型。KM和Cox回归分析表明,该模型能准确预测LC的预后。RT-qPCR显示,LC细胞中CERCAM、CHPF、EXT2和MED15表达上调,EPHX3水平下降。本研究建立了一个可预测LC患者预后的五种嗜丝虫相关基因模型,从而为更好地理解LC并推进其临床治疗奠定了基础。
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引用次数: 0
Study of Therapeutic Mechanisms of Bupi Yichang Formula against Colon Cancer Based on Network Pharmacology, Machine Learning, and Experimental Verification 基于网络药理学、机器学习和实验验证的布比益昌方对结肠癌的治疗机制研究
IF 1.3 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.1615/critrevimmunol.2023051509
Juan Du
Bupi Yichang formula (BPYCF) has shown the anti-cancer potential; however, its effects on colon cancer and the mechanisms remain unknown. This study intended to explore the effects of BPYC on colon cancer and its underlying mechanisms. BPYCF-related and colon cancer-related targets were acquired from public databases, followed by differentially expressed genes (DEG) identification. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were performed using clusterProfiler. A protein-protein interaction (PPI) network was constructed using STRING database. CytoHubba and MCODE to screen the hub targets. A diagnostic model was built using random forest algorithm. Molecular docking was conducted using PyMOL and AutoDock. High-performance liquid chromatograph-mass spectrometry (HPLC-MS) analysis and in vitro validation were performed. Forty-six overlapping targets of BPYCF-related, colon cancer-related targets, and DEGs were obtained. GO and KEGG analyses showed that the targets were mainly enriched in response to lipopolysaccharide, neuronal cell body, protein serine/threonine/tyrosine, as well as C-type lectin receptor, NOD-like receptor, and TNF signaling pathways. Five targets were identified as the pivotal targets, among which, NOS3, CASP8, RIPK3, and TNFRSF10B were stably docked with the core active component, naringenin. Naringenin was also identified from the BPYCF sample through HPLC-MS analysis. In vitro experiments showed that BPYCF inhibited cell viability, reduced NOS3 expression, and elevated CASP8, RIPK3, and TNFRSF10B expression in colon cancer cells. BPYCF might treat colon cancer mainly by regulating NOS3, CASP8, RIPK3, and TN-FRSF10B. This study first revealed the therapeutic effects and mechanisms of BPYCF against colon cancer, paving the path for the development of targeted therapeutic strategies for this cancer in the clinic.
布比益昌方(BPYCF)具有抗癌潜力,但其对结肠癌的影响及其机制仍不清楚。本研究旨在探讨布比益肝方对结肠癌的作用及其机制。研究人员从公共数据库中获取了 BPYCF 相关靶点和结肠癌相关靶点,并对其进行了差异表达基因(DEG)鉴定。使用clusterProfiler对基因本体(GO)和京都基因组百科全书(KEGG)进行了分析。使用 STRING 数据库构建了蛋白质-蛋白质相互作用(PPI)网络。利用 CytoHubba 和 MCODE 筛选枢纽靶标。使用随机森林算法建立了诊断模型。使用 PyMOL 和 AutoDock 进行分子对接。进行了高效液相色谱-质谱(HPLC-MS)分析和体外验证。结果发现了 46 个与 BPYCF 相关的重叠靶点、与结肠癌相关的靶点和 DEGs。GO和KEGG分析表明,这些靶点主要富集在脂多糖、神经元细胞体、蛋白丝氨酸/苏氨酸/酪氨酸以及C型凝集素受体、NOD样受体和TNF信号通路中。其中,NOS3、CASP8、RIPK3 和 TNFRSF10B 与核心活性成分柚皮苷稳定对接。通过 HPLC-MS 分析,还从 BPYCF 样品中鉴定出了柚皮苷。体外实验表明,BPYCF 能抑制结肠癌细胞的活力,降低 NOS3 的表达,提高 CASP8、RIPK3 和 TNFRSF10B 的表达。BPYCF可能主要通过调节NOS3、CASP8、RIPK3和TN-FRSF10B来治疗结肠癌。该研究首次揭示了BPYCF对结肠癌的治疗作用和机制,为临床开发结肠癌靶向治疗策略铺平了道路。
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引用次数: 0
MiRNA let-7d-5p Alleviates Inflammatory Responses by Targeting Map3k1 and Inactivating ERK/p38 MAPK Signaling in Microglia MiRNA let-7d-5p 通过靶向 Map3k1 和使小胶质细胞中的 ERK/p38 MAPK 信号失活来缓解炎症反应
IF 1.3 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.1615/critrevimmunol.2024051776
Fan Fang, Cheng Chen
Alzheimer's disease (AD) is the most common form of dementia. Aberrant regulation of microRNAs (miRNAs) has been implicated in the pathogenesis of AD. In a large case-control study recruiting 208 patients with AD and 205 elderly control subjects, miRNA-let-7d-5p attracted our attention for its downregulated level in patients with AD. However, the biological functions of let-7d-5p in AD pathogenesis have not been investigated. This study emphasized the functions and mechanisms of let-7d-5p in the pathogenesis of AD. Mouse microglial BV2 cells treated with amyloid-β (Aβ)1-42 were used as in vitro AD inflammation models. We reported that let-7d-5p was downregulated in Aβ 1-42-stimulated BV2 cells, and upregulation of let-7d-5p promoted the transversion of microglial cells from Ml phenotype to M2 phenotype. Then, the binding relationship between let-7d-5p and Map3k1 was verified by luciferase reporter assays. Mechanistically, let-7d-5p could target Map3k1 3'UTR to inactivate ERK/p38 MAPK signaling. Therefore, it was suggested that let-7d-5p might be a novel modulator of microglial neuroinflammation and serve as a novel target for diagnosis and treatment of AD.
阿尔茨海默病(AD)是最常见的痴呆症。微RNA(miRNA)的异常调控与阿尔茨海默病的发病机制有关。在一项招募了208名AD患者和205名老年对照受试者的大型病例对照研究中,miRNA-let-7d-5p因其在AD患者中的下调水平而引起了我们的注意。然而,let-7d-5p 在 AD 发病机制中的生物学功能尚未得到研究。本研究强调了let-7d-5p在AD发病机制中的功能和机制。我们用淀粉样蛋白-β(Aβ)1-42处理的小鼠小胶质细胞BV2作为体外AD炎症模型。我们发现,let-7d-5p在Aβ 1-42刺激的BV2细胞中被下调,而let-7d-5p的上调促进了小胶质细胞从Ml表型向M2表型的转化。然后,通过荧光素酶报告实验验证了let-7d-5p与Map3k1的结合关系。从机理上讲,let-7d-5p可以靶向Map3k1的3'UTR,使ERK/p38 MAPK信号失活。因此,let-7d-5p可能是一种新型的小胶质细胞神经炎症调节剂,并可作为诊断和治疗AD的新靶点。
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引用次数: 0
LAMA3 Promotes Tumorigenesis of Oral Squamous Cell Carcinoma by METTL3-Mediated N6-Methyladenosine Modification LAMA3通过mettl3介导的n6 -甲基腺苷修饰促进口腔鳞状细胞癌的发生
IF 1.3 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.1615/critrevimmunol.2023051066
Baoshan Ning, Yine Mei
Laminin subunit alpha 3 (LAMA3) is a cancer regulator. However, its effects and regulatory pathways in oral squamous cell carcinoma (OSCC) progression remain unknown. This research aimed to determine the influence of LAMA3 regulation via methyltransferase-like 3 (METTL3) on OSCC progression. Using quantitative real-time polymerase chain reaction and bioinformatics analysis, the expression levels of LAMA3 and METTL3 in OSCC tissues were examined. The functional roles of LAMA3 and METTL3 were analyzed using cell functional experiments. Using methylated RNA immunoprecipitation and mRNA stability assays, LAMA3 and METTL3 regulation was investigated. In OSCC tissues, LAMA3 was upregulated. LAMA3 inhibition hampered OSCC cell proliferation, invasion, and migration while its overexpression facilitated OSCC cell progression. METTL3 serves as a crucial upstream regulator of LAMA3 in OSCC and upregulates LAMA3 expression via an m6A-dependent mechanism. The low METTL3 expression partially restored the enhanced malignant phenotype induced by LAMA3 overexpression. Our findings indicate that METTL3 and LAMA3 act as pro-oncogenic factors in OSCC, with METTL3 promoting OSCC malignancy via m6A modification-dependent stabilization of LAMA3 transcripts, representing a novel regulatory mechanism in OSCC.
层粘连蛋白亚单位- 3 (LAMA3)是一种癌症调节剂。然而,其在口腔鳞状细胞癌(OSCC)进展中的作用和调控途径尚不清楚。本研究旨在确定通过甲基转移酶样3 (METTL3)调控LAMA3对OSCC进展的影响。采用实时定量聚合酶链反应和生物信息学分析,检测LAMA3和METTL3在OSCC组织中的表达水平。通过细胞功能实验分析LAMA3和METTL3的功能作用。利用甲基化RNA免疫沉淀和mRNA稳定性分析,研究LAMA3和METTL3的调控。在OSCC组织中,LAMA3表达上调。LAMA3的抑制抑制了OSCC细胞的增殖、侵袭和迁移,而其过表达促进了OSCC细胞的进展。METTL3在OSCC中是LAMA3的重要上游调控因子,并通过m6a依赖的机制上调LAMA3的表达。低表达的METTL3部分恢复了LAMA3过表达引起的增强的恶性表型。我们的研究结果表明,METTL3和LAMA3在OSCC中作为促癌因子,其中METTL3通过m6A修饰依赖性LAMA3转录物的稳定促进OSCC恶性,代表了一种新的OSCC调节机制。
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引用次数: 0
Employing Multicolor Melting Curve Analysis to Rapidly Identify Non-Tuberculous Mycobacteria in Patients with Bronchiectasis: A Study from a Pulmonary Hospital in the Fuzhou District of China, 2018−2022 利用多色熔融曲线分析快速识别支气管扩张患者的非结核分枝杆菌:2018-2022年中国福州地区肺科医院的一项研究
IF 1.3 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.1615/critrevimmunol.2024052213
Mintao Zheng, Xinchao Chen, Qiaoqian Chen, Xiaohong Chen, Mingxiang Huang
Non-tuberculous mycobacteria (NTM) infection is common in bronchiectasis, with rising incidence globally. However, investigation into NTM in bronchiectasis patients in China remains relatively limited. This work aimed to identify and understand the features of NTM in bronchiectasis patient in Fuzhou district of China. The pulmonary samples were collected from 281 bronchiectasis patients with suspected NTM infection in Fuzhou, 2018-2022. MPB64 antigen detection was employed for the preliminary evaluation of NTM. Further NTM identification was realized using gene chip and gene sequencing. Among 281 patients, 172 (61.21%) patients were NTM-positive (58.72%) according to MPB64 antigen detection, with females (58.72%) outnumbering males (41.28%) and the highest prevalence in the age group of 46-65 years. In total, 47 NTM single infections and 3 mixed infections (1 Mycobacterium tuberculosis complex-M. intracellulare, 1 M. avium-M. intracellulare, and 1 M. abscessus-M. intracellulare) were identified through multicolor melting curve analysis (MMCA), which was compared with gene sequencing results. Both methods suggested Mycobacterium (M.) intracellulare, M. abscessus, and M. avium as the primary NTM species affecting bronchiectasis patients. M. intracellulare and M. abscessus were more frequent in females than males with the highest prevalence in the age group of 46-65 years according to MMCA. This research provides novel insights into the epidemiological and clinical features of NTM in bronchiectasis patients in Southeastern China. Significantly, M. intracellulare, M. abscessus, and M. avium were identified as the major NTM species, contributing to a better understanding and management of bronchiectasis accompanied by NTM infection.
非结核分枝杆菌(NTM)感染在支气管扩张症中很常见,其发病率在全球呈上升趋势。然而,中国对支气管扩张症患者非结核分枝杆菌感染的调查仍相对有限。本研究旨在确定和了解中国福州地区支气管扩张症患者的 NTM 特征。收集了2018-2022年福州地区281例疑似NTM感染的支气管扩张症患者的肺部样本。采用MPB64抗原检测对NTM进行初步评估。利用基因芯片和基因测序实现对NTM的进一步鉴定。在281例患者中,经MPB64抗原检测,172例(61.21%)患者为NTM阳性(58.72%),其中女性(58.72%)多于男性(41.28%),46-65岁年龄组发病率最高。通过多色熔解曲线分析(MMCA)和基因测序结果比较,共鉴定出 47 例 NTM 单一感染和 3 例混合感染(1 例复合结核分枝杆菌-M.细胞内分枝杆菌、1 例鸟疫分枝杆菌-M.细胞内分枝杆菌和 1 例脓肿分枝杆菌-M.细胞内分枝杆菌)。这两种方法都表明细胞内分枝杆菌(M. intracellulare)、脓肿分枝杆菌(M. abscessus)和禽分枝杆菌(M. avium)是影响支气管扩张症患者的主要非结核分枝杆菌。根据MMCA的数据,细胞内分枝杆菌和脓肿分枝杆菌在女性中的发病率高于男性,在46-65岁年龄组中发病率最高。这项研究为了解中国东南地区支气管扩张症患者中非典型肺炎霉菌的流行病学和临床特征提供了新的视角。值得注意的是,细胞内膜霉菌、脓肿膜霉菌和阿维菌被确定为主要的非淋菌性支气管扩张症病原体,这有助于更好地了解和治疗伴有非淋菌性支气管扩张症的支气管炎。
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引用次数: 0
A Machine Learning Method for a Blood Diagnostic Model of Pancreatic Cancer Based on microRNA Signatures 基于 microRNA 标识的胰腺癌血液诊断模型的机器学习方法
IF 1.3 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.1615/critrevimmunol.2023051250
Bin Huang, Chang Xin, Huanjun Yan, Zhewei Yu
This study aimed to construct a blood diagnostic model for pancreatic cancer (PC) using miRNA signatures by a combination of machine learning and biological experimental verification. Gene expression profiles of patients with PC and transcriptome normalization data were obtained from the Gene Expression Omnibus (GEO) database. Using random forest algorithm, lasso regression algorithm, and multivariate cox regression analyses, the classifier of differentially expressed miRNAs was identified based on algorithms and functional properties. Next, the ROC curve analysis was used to evaluate the predictive performance of the diagnostic model. Finally, we analyzed the expression of two specific miRNAs in Capan-1, PANC-1, and MIA PaCa-2 pancreatic cells using qRT-PCR. Integrated microarray analysis revealed that 33 common miRNAs exhibited significant differences in expression profiles between tumor and normal groups (P value < 0.05 and |logFC| > 0.3). Pathway analysis showed that differentially expressed miRNAs were related to P00059 p53 pathway, hsa04062 chemokine signaling pathway, and cancer-related pathways including PC. In ENCORI database, the hsa-miR-4486 and hsa-miR-6075 were identified by random forest algorithm and lasso regression algorithm and introduced as major miRNA markers in PC diagnosis. Further, the receiver operating characteristic curve analysis achieved the area under curve score > 80%, showing good sensitivity and specificity of the two-miRNA signature model in PC diagnosis. Additionally, hsa-miR-4486 and hsa-miR-6075 genes expressions in three pancreatic cells were all up-regulated by qRT-PCR. In summary, these findings suggest that the two miRNAs, hsa-miR-4486 and hsa-miR-6075, could serve as valuable prognostic markers for PC.
本研究旨在通过机器学习和生物学实验验证相结合的方法,利用miRNA特征构建胰腺癌(PC)的血液诊断模型。研究人员从基因表达总库(GEO)数据库中获取了胰腺癌患者的基因表达谱和转录组归一化数据。利用随机森林算法、lasso回归算法和多变量cox回归分析,根据算法和功能特性确定了差异表达miRNA的分类器。接着,我们利用 ROC 曲线分析评估了诊断模型的预测性能。最后,我们利用 qRT-PCR 分析了两种特定 miRNA 在 Capan-1、PANC-1 和 MIA PaCa-2 胰腺细胞中的表达。综合微阵列分析显示,33 个常见 miRNA 在肿瘤组和正常组之间的表达谱有显著差异(P 值为 0.05,|logFC| >0.3)。通路分析表明,差异表达的 miRNA 与 P00059 p53 通路、hsa04062 趋化因子信号通路以及包括 PC 在内的癌症相关通路有关。在 ENCORI 数据库中,随机森林算法和拉索回归算法识别出了 hsa-miR-4486 和 hsa-miR-6075,并将其作为诊断 PC 的主要 miRNA 标志物。此外,接收者操作特征曲线分析的曲线下面积得分达到了80%,显示了两个miRNA特征模型在PC诊断中良好的灵敏度和特异性。此外,通过 qRT-PCR 分析,hsa-miR-4486 和 hsa-miR-6075 基因在三种胰腺细胞中的表达均呈上调趋势。总之,这些研究结果表明,hsa-miR-4486 和 hsa-miR-6075 这两种 miRNA 可作为 PC 有价值的预后标志物。
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引用次数: 0
Downregulation of miR-503-5p promotes the development of pancreatic cancer via targeting cyclin E2 下调 miR-503-5p 可通过靶向细胞周期蛋白 E2 促进胰腺癌的发展
IF 1.3 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.1615/critrevimmunol.2024051136
Fei Li, Ying-pei Ling, Pan Wang, Shi-cheng Gu, Hao Jiang, Jie Zhu
Objective: This study aimed to elucidate the role of microRNA-503 (miR-503) in pancreatic cancer (PC) progression and the underlying regulatory mechanisms.Methods: We acquired miR-503-3p and miR-503-5p expression data along with survival times of PC and normal samples from the UCSC Xena database. Using the t-test, we compared the expression of miR-503-3p and miR-503-5p between PC and normal samples, and evaluated their prognostic significance via Kaplan-Meier survival analysis. The expression of miR-503-5p in PC cells was detected by quantitative PCR. We subsequently overexpressed miR-503-5p in PC cells and examined cell viability, apoptosis, and migration through CCK8 assay, flow cytometry, and Transwell assay, respectively. Potential functional targets were identified using miRTarBase and validated by dual-luciferase reporter assay.Results: Both miR-503-3p and miR-503-5p expression were found to be downregulated in PC; however, only miR-503-5p was linked to cancer prognosis based on public data. In vitro experiments demonstrated that overexpression of miR-503-5p substantially decreased cell viability, induced apoptosis, caused G0/G1 arrest, and inhibited cell migration. miR-503-5p was found to target cyclin E2 (CCNE2), and overexpression of CCNE2 could counteract the effects of miR-503-5p on PC cells.Conclusion: The downregulation of miR-503-5p enhances the progression of PC by targeting CCNE2. The detection of miR-503-5p expression may provide valuable insights for the prevention and prognostic evaluation of PC.
研究目的本研究旨在阐明microRNA-503(miR-503)在胰腺癌(PC)进展中的作用及其潜在调控机制:方法:我们从 UCSC Xena 数据库中获取了 miR-503-3p 和 miR-503-5p 的表达数据以及 PC 和正常样本的生存时间。我们用t检验比较了PC样本和正常样本中miR-503-3p和miR-503-5p的表达,并通过Kaplan-Meier生存分析评估了它们的预后意义。我们通过定量 PCR 检测了 miR-503-5p 在 PC 细胞中的表达。随后,我们在 PC 细胞中过表达了 miR-503-5p,并通过 CCK8 检测法、流式细胞术和 Transwell 检测法分别检测了细胞活力、凋亡和迁移。利用 miRTarBase 鉴定了潜在的功能靶点,并通过双荧光素酶报告实验进行了验证:结果:研究发现,miR-503-3p和miR-503-5p在PC中的表达均出现下调;然而,根据公开数据,只有miR-503-5p与癌症预后有关。体外实验表明,miR-503-5p的过表达会大幅降低细胞活力、诱导细胞凋亡、导致G0/G1停滞和抑制细胞迁移。研究发现,miR-503-5p以细胞周期蛋白E2(CCNE2)为靶标,而CCNE2的过表达可抵消miR-503-5p对PC细胞的影响:结论:miR-503-5p的下调通过靶向CCNE2促进PC的进展。结论:miR-503-5p的下调通过靶向CCNE2而促进PC的进展,检测miR-503-5p的表达可为PC的预防和预后评估提供有价值的见解。
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Critical Reviews in Immunology
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