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Functional characterization of promoter regions in selenoprotein synthesis-relevant genes (sbp2, eefsec and sepsecs) and their selenium-dependent regulation in yellow catfish Pelteobagrus fulvidraco 黄颡鱼硒蛋白合成相关基因(sbp2、eefsec和sepsecs)启动子区功能特征及其硒依赖性调控
IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-07-04 DOI: 10.1016/j.bbagrm.2025.195105
Kai Zhang , An-Gen Yu , Hua Zheng , Pei-Jia Li , Zhi Luo
The study explored the transcriptional regulation of selenoprotein synthesis-relevant genes, such as selenocysteine insertion sequence element binding protein 2 (sbp2), eukaryotic elongation factor (eefsec) and o-phosphoserine selenocysteine tRNA synthase (sepsecs), and their selenium-mediated regulation in yellow catfish Pelteobagrus fulvidraco, an important fish with ecological and economic importance in several Asian countries. We cloned the sequences of sbp2, eefsec and sepsecs promoters, spanning from −2060 bp to +61 bp, −1910 bp to +53 bp and − 1456 bp to +51 bp relative to the TSS, respectively. Through sequential deletion and mutation analysis of their promoters, we identified several functional binding sites: the signal transducer and activator of transcription 1 (STAT1) binding site (−1308 bp to −1322 bp) and the forkhead box protein O1 (FOXO1) binding site (−1778 bp to −1788 bp) in the sbp2 promoter; the FOXO1 binding site (−1070 bp to −1080 bp) and the STAT3 binding site (−428 bp to −436 bp) in the eefsec promoter; and the FOXO1 binding site (−721 bp to −731 bp) in the sepsecs promoter. The activity of these binding sites was regulated by selenomethionine (Se-Met) incubation. Furthermore, electrophoretic mobility shift assay and chromatin immunoprecipitation experiments confirmed that these binding sites interact with their corresponding transcription factors above. For the first time, we demonstrated that STAT1 and FOXO1 regulate transcriptional activity of sbp2 promoter; STAT3 and FOXO1 regulate transcriptional activity of eefsec promoter; and FOXO1 regulates transcriptional activity of sepsecs promoter. These findings provide novel insights into regulatory mechanisms of selenoprotein synthesis in yellow catfish.
本研究探讨了硒蛋白合成相关基因,如硒氨酸半胱氨酸插入序列元件结合蛋白2 (sbp2)、真核延伸因子(eefsec)和磷酸丝氨酸硒氨酸半胱氨酸tRNA合酶(sepsecs)在黄颡鱼(Pelteobagrus fulvidraco)中的转录调控及其硒介导的调控。黄颡鱼是亚洲一些国家重要的生态和经济鱼类。我们克隆了sbp2、eefsec和sepsecs启动子的序列,相对于TSS分别为-2060 bp至+61 bp、-1910 bp至+53 bp和 - 1456 bp至+51 bp。通过对其启动子的序列删除和突变分析,我们确定了几个功能结合位点:sbp2启动子中的转录信号转换器和激活子1 (STAT1)结合位点(-1308 bp至-1322 bp)和叉头盒蛋白O1 (FOXO1)结合位点(-1778 bp至-1788 bp);eefsec启动子中的FOXO1结合位点(-1070 bp ~ -1080 bp)和STAT3结合位点(-428 bp ~ -436 bp);sepsecs启动子中的FOXO1结合位点(-721 bp至-731 bp)。硒代蛋氨酸(Se-Met)孵育可调节这些结合位点的活性。此外,电泳迁移率转移实验和染色质免疫沉淀实验证实了这些结合位点与上述相应的转录因子相互作用。我们首次证实STAT1和FOXO1调控sbp2启动子的转录活性;STAT3和fox01调控eefsec启动子的转录活性;fox01调控sepsecs启动子的转录活性。这些发现为黄鲶鱼硒蛋白合成的调控机制提供了新的见解。
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引用次数: 0
Transposon insertion causes ctnnb2 transcript instability that results in the maternal effect zebrafish ichabod (ich) mutation 转座子插入导致ctnnb2转录不稳定,导致母体效应斑马鱼ichabod (rich)突变。
IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-06-30 DOI: 10.1016/j.bbagrm.2025.195104
Zsombor Varga , Ferenc Kagan , Shingo Maegawa , Ágnes Nagy , Javan Okendo , Shawn M. Burgess , Eric S. Weinberg , Máté Varga
The maternal-effect mutation ichabod (ich) results in ventralized zebrafish embryos due to impaired induction of the dorsal canonical Wnt-signaling pathway. While previous studies linked the phenotype to reduced ctnnb2 transcript levels, the causative mutation remained unidentified. Using long-read sequencing, we discovered that the ich phenotype stems from the insertion of a non-autonomous CMC-Enhancer/Suppressor-mutator (CMC-EnSpm) transposon in the 3’UTR of the gene. Through reporter assays, we demonstrate that while wild type ctnnb2 mRNAs exhibit remarkably high stability throughout the early stages of development, the insertion of the transposon dramatically reduces transcript stability. Genome-wide mapping of the CMC-EnSpm transposons across multiple zebrafish strains also indicated ongoing transposition activity in the zebrafish genome. Our findings not only resolve the molecular basis of the ich mutation but also highlight the continuing mutagenic potential of endogenous transposons and reveal unexpected aspects of maternal transcript regulation during early zebrafish development.
母体效应突变ichabod (ich)导致斑马鱼胚胎腹化,这是由于背部典型wnt信号通路的诱导受损。虽然先前的研究将表型与ctnnb2转录物水平降低联系起来,但致病突变仍未确定。通过长读测序,我们发现丰富的表型源于在基因的3'UTR中插入一个非自主的cmc -增强子/抑制子-突变子(CMC-EnSpm)转座子。通过报告者实验,我们发现野生型ctnnb2 mrna在早期发育阶段表现出非常高的稳定性,但转座子的插入显著降低了转录物的稳定性。CMC-EnSpm转座子在多个斑马鱼菌株中的全基因组定位也表明斑马鱼基因组中正在进行转座子活性。我们的发现不仅解决了丰富突变的分子基础,还强调了内源性转座子的持续致突变潜力,并揭示了斑马鱼早期发育过程中母体转录调控的意想不到的方面。
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引用次数: 0
DUSP1 protein's impact on breast cancer: Anticancer response and sensitivity to cisplatin DUSP1蛋白对乳腺癌的影响:抗癌反应和对顺铂的敏感性
IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-06-25 DOI: 10.1016/j.bbagrm.2025.195103
Sefa Metin , Hilal Altan , Ergün Tercan , Bala Gur Dedeoglu , Hakan Gurdal
Dual-Specificity Phosphatase 1 (DUSP1) modulates the activity of members of the Mitogen-Activated Protein Kinase (MAPK) family, including p38, JNK, and ERK1/2, which affects various cellular functions in cancer. Moreover, DUSP1 is known to influence the outcomes of cancer chemotherapy. This study aimed to reduce DUSP1 protein expression using CRISPR/Cas9 and siRNA and assess its effects on cell proliferation, migration, and tumor growth potential in triple-negative breast cancer (TNBC) cells. We examined the expression levels of p38, JNK, and ERK1/2, along with their phosphorylated forms, and investigated DUSP1's influence to cisplatin sensitivity. Our findings revealed that the downregulation of DUSP1 expression inhibited the proliferation, migration, and tumor growth potential of TNBC cells. Additionally, BCI, an inhibitor of DUSP1/6, demonstrated anti-proliferative effects on these cells. Decreasing the expression of DUSP1 increased the phosphorylation ratio of p38 and JNK, but not ERK1/2. Moreover, the anticancer response induced by cisplatin was enhanced by reducing DUSP1 expression or by treating the cells with BCI. Notably, cisplatin treatment increased p38 phosphorylation, which was significantly augmented by reduced DUSP1 expression. We also demonstrated that the DUSP1 inhibition-induced anticancer response in these cells predominantly relied on p38 activity. These findings contribute to a better understanding of the role of DUSP1 in breast cancer and offer insights into potential therapeutic strategies targeting DUSP1 to enhance the efficacy of cisplatin treatment. Our study highlights that decreased DUSP1 protein expression and activity mediates an anticancer response and increases the sensitivity of MDA-MB231 cells to cisplatin by regulating p38.
双特异性磷酸酶1 (DUSP1)调节丝裂原活化蛋白激酶(MAPK)家族成员的活性,包括p38、JNK和ERK1/2,影响癌症中的各种细胞功能。此外,已知DUSP1会影响癌症化疗的结果。本研究旨在利用CRISPR/Cas9和siRNA降低DUSP1蛋白表达,并评估其对三阴性乳腺癌(TNBC)细胞增殖、迁移和肿瘤生长潜力的影响。我们检测了p38、JNK和ERK1/2及其磷酸化形式的表达水平,并研究了DUSP1对顺铂敏感性的影响。我们的研究结果表明,下调DUSP1的表达抑制了TNBC细胞的增殖、迁移和肿瘤生长潜能。此外,DUSP1/6的抑制剂BCI对这些细胞具有抗增殖作用。降低DUSP1的表达增加了p38和JNK的磷酸化比例,但没有增加ERK1/2的磷酸化比例。此外,顺铂诱导的抗癌反应可通过降低DUSP1表达或BCI处理细胞而增强。值得注意的是,顺铂治疗增加了p38磷酸化,而DUSP1表达的降低则显著增强了p38磷酸化。我们还证明了DUSP1抑制诱导的这些细胞的抗癌反应主要依赖于p38活性。这些发现有助于更好地了解DUSP1在乳腺癌中的作用,并为针对DUSP1的潜在治疗策略提供见解,以提高顺铂治疗的疗效。我们的研究强调,DUSP1蛋白表达和活性的降低介导抗癌反应,并通过调节p38增加MDA-MB231细胞对顺铂的敏感性。
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引用次数: 0
RhoA functionally collaborates with HSPA1A to promote the migratory phenotype of cancer cells RhoA与HSPA1A在功能上协同促进癌细胞的迁移表型
IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-06-20 DOI: 10.1016/j.bbagrm.2025.195101
Sumaiya Nabi , Mohammad Amin Hajam , Umar Mushtaq , Aadil Manzoor Baba , Bashir Ahmad Malla , Firdous Ahmad Khanday , Nazir Ahmad Dar
RhoA, a member of the GTPase family, plays a pivotal role in attaining a migratory phenotype, mainly by regulating cytoskeleton dynamics, cell adhesion and membrane protrusions. Although many upstream regulators and downstream effectors of RhoA have been identified, the discovery of new interacting partners continues to expand its interactome, providing fresh insights into its regulation and function. Co-immunoprecipitation and fluorescence microscopy were used to study the interaction, localization and morphological effects of HSPA1A and RhoA. The interaction was validated by modulating the protein expression through transfections and silencing approaches. Cell proliferation, migration and viability were assessed using MTT, a Boyden chamber and FACS assays, respectively. Our study identified HSPA1A, as an unexplored interacting partner of RhoA under physiological conditions. Functional analyses showed that the interaction between HSPA1A and RhoA enhances the migratory potential of cancer cells, induces G0/G1 cell cycle arrest and promotes a rounded cell morphology. Under HSPA1A transfection, increased RhoA protein levels were observed, while the silencing of HSPA1A resulted in decreased RhoA levels. This study highlights the critical role of HSPA1A-RhoA interaction in regulating cancer cell migration, morphology and cell cycle progression. These findings lay the groundwork for future research into its potential clinical applications.
RhoA是GTPase家族的一员,主要通过调节细胞骨架动力学、细胞粘附和膜突出在迁移表型的实现中起关键作用。虽然RhoA的许多上游调控因子和下游效应因子已经被确定,但新的相互作用伙伴的发现继续扩大其相互作用组,为其调节和功能提供了新的见解。采用免疫共沉淀法和荧光显微镜技术研究HSPA1A和RhoA的相互作用、定位和形态效应。通过转染和沉默方法调节蛋白表达,验证了这种相互作用。分别采用MTT、Boyden室和FACS法评估细胞增殖、迁移和活力。我们的研究发现HSPA1A在生理条件下是RhoA的一个未被探索的相互作用伙伴。功能分析表明,HSPA1A与RhoA的相互作用增强了癌细胞的迁移潜能,诱导G0/G1细胞周期阻滞,促进细胞形态呈圆形。转染HSPA1A后,RhoA蛋白水平升高,而沉默HSPA1A导致RhoA蛋白水平降低。本研究强调了HSPA1A-RhoA相互作用在调节癌细胞迁移、形态和细胞周期进程中的关键作用。这些发现为进一步研究其潜在的临床应用奠定了基础。
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引用次数: 0
ARID1A-driven modulation of EZH2 impedes proliferation and enhances senescence in breast cancer cells arid1a驱动的EZH2调控可抑制乳腺癌细胞的增殖并促进衰老。
IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-06-19 DOI: 10.1016/j.bbagrm.2025.195102
Neena George , Rayzel Fernandes , Kapaettu Satyamoorthy
ARID1A mutations, in association with EZH2 overexpression, are linked to various malignancies, particularly those driven by epigenetic dysregulation and associated with therapy resistance. The prevalence of ARID1A mutations is high in ER+ breast cancer, and studies have mainly explored the synthetic lethal effects of these proteins. However, the tumor-suppressive mechanisms of ARID1A are complex and not yet fully understood. In this study, we explored the potential tumor-specific epigenetic antagonism between ARID1A and EZH2 in breast cancer cells, particularly focusing on the modulation of EZH2 by ARID1A through senescence pathway activation. Treatment with DNA-damaging agents induced senescence, which was associated with upregulation of ARID1A expression and a concurrent reduction in EZH2 levels, suggesting a potential role for ARID1A in the induction and maintenance of the senescence phenotype. Overexpression of ARID1A led to reduced EZH2 levels, suppressed cell proliferation in MCF-7 and MDA-MB231 cells, and induced a senescence-like phenotype. These cells exhibited changes in cell-to-cell adhesion, increased filopodium formation, and G0/G1 cell cycle arrest. This antiproliferative effect of ARID1A is mediated through the activation of the p53-p21/p16 axis. Furthermore, ARID1A knockdown-associated downregulation of EZH2 highlights the integral role of ARID1A in destabilizing the expression of EZH2 and contributing to cell cycle arrest. Importantly, we found that dasatinib treatment selectively targeted tumor cells overexpressing ARID1A. These findings provide preliminary insight into the molecular mechanisms by which ARID1A regulates EZH2 and establishes a senescence phenotype, offering valuable directions for developing more effective and personalized treatments.
与EZH2过表达相关的ARID1A突变与各种恶性肿瘤有关,特别是那些由表观遗传失调驱动并与治疗耐药性相关的恶性肿瘤。ARID1A突变在ER+乳腺癌中的患病率很高,研究主要探讨这些蛋白的合成致死作用。然而,ARID1A的肿瘤抑制机制是复杂的,尚未完全了解。在这项研究中,我们探索了ARID1A和EZH2在乳腺癌细胞中潜在的肿瘤特异性表观遗传拮抗作用,特别关注了ARID1A通过衰老途径激活对EZH2的调节。dna损伤剂处理诱导衰老,这与ARID1A表达上调和EZH2水平降低相关,提示ARID1A在诱导和维持衰老表型中可能起作用。ARID1A的过表达导致EZH2水平降低,抑制MCF-7和MDA-MB231细胞的细胞增殖,并诱导衰老样表型。这些细胞表现出细胞间粘附的变化,丝足形成增加,G0/G1细胞周期停滞。ARID1A的这种抗增殖作用是通过激活p53-p21/p16轴介导的。此外,ARID1A敲低相关的EZH2下调强调了ARID1A在破坏EZH2表达稳定和促进细胞周期阻滞中的整体作用。重要的是,我们发现达沙替尼治疗选择性靶向过表达ARID1A的肿瘤细胞。这些发现初步揭示了ARID1A调控EZH2并建立衰老表型的分子机制,为开发更有效和个性化的治疗方法提供了有价值的指导。
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引用次数: 0
Growth rate is related to elongation of RNA polymerase II transcription in Saccharomyces cerevisiae 酿酒酵母菌的生长速率与RNA聚合酶II转录的伸长有关。
IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-06-08 DOI: 10.1016/j.bbagrm.2025.195100
A.I. Garrido-Godino , R. González , M. Martín-Expósito , S. Chávez , J.E. Pérez-Ortín , F. Navarro
Cells must adapt to changing environmental conditions to maintain their fitness and to compete with other genotypes during the natural selection process. The growth rate (GR) is a determining factor in this competition, and it influences gene expression. Some genes increase mRNA levels, while others decrease with the GR. mRNA levels depend on the dynamic balance between their synthesis by RNA polymerase II and their degradation rates. RNA polymerase I and III are also influenced by the GR because they transcribe protein synthesis machinery required to make proteins that increase cell mass during growth. Although RNA levels have been extensively studied in relation to the GR in many organisms, synthesis and degradation rates have, however, been much less investigated. In a previous work, we found a positive correlation between RNA polymerase (RNA pol) II transcription and mRNA degradation with GRs in yeast in batch cultures. Here we extend our study under constant growth conditions in a chemostat and find that overall chromatin-associated RNA pol II levels increase in parallel with the GR. This increase appears to involve the accumulation of partially dephosphorylated RNA pol II with a greater tendency to backtracking, which suggests that the GR modifies the phosphorylation state of RNA pol II at the elongation level. RNA pol I also increases its association with chromatin with the GR, which confirms the general dependence of at least RNA pol I and II transcription on the GR.
在自然选择过程中,细胞必须适应不断变化的环境条件,以保持其适应性,并与其他基因型竞争。生长速率(GR)是这种竞争的决定性因素,它影响着基因的表达。一些基因的mRNA水平随着gr的增加而增加,而另一些基因的mRNA水平则随着gr的增加而降低。mRNA水平取决于RNA聚合酶II合成和降解率之间的动态平衡。RNA聚合酶I和RNA聚合酶III也受到GR的影响,因为它们转录蛋白质合成机制,以在生长过程中制造增加细胞质量的蛋白质。尽管在许多生物体中,RNA水平与GR的关系已被广泛研究,但对其合成和降解率的研究却少得多。在之前的工作中,我们发现在批量培养的酵母中,RNA聚合酶(RNA pol) II转录和mRNA降解与GRs呈正相关。在此,我们在趋化器中持续生长的条件下扩展了我们的研究,发现染色质相关的RNA pol II水平与GR平行增加。这种增加似乎涉及部分去磷酸化的RNA pol II的积累,并且更倾向于回溯,这表明GR在延伸水平上改变了RNA pol II的磷酸化状态。RNA pol I也增加了其与GR中染色质的关联,这证实了至少RNA pol I和II的转录对GR的普遍依赖。
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引用次数: 0
Insights into the target-directed miRNA degradation mechanism in Drosophila ovarian cell culture 果蝇卵巢细胞培养中靶向miRNA降解机制的研究
IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-05-04 DOI: 10.1016/j.bbagrm.2025.195092
Natalia Akulenko , Elena Mikhaleva , Sofya Marfina , Ivan Kutelev , Dmitry Kornyakov , Vlad Bobrov , Andrei Artamonov , Georgij Arapidi , Victoria Shender , Sergei Ryazansky
Target-directed miRNA degradation (TDMD) is a process of post-transcriptional regulation of miRNA stability in animals induced by an extended pairing of Ago-bound miRNAs with specialized complementary RNA targets. As suggested by studies on human cell culture, Ago engaged with the extended duplex is recognized by the ZSWIM8 receptor of the Cullin-RING-ligase complex (CRL3), which also contains Cul3, EloB, and EloC proteins. The CRL activity is accelerated by the neddylation of Cul3 with the involvement of the E2 conjugating protein UbcE2M. The CRL ubiquitinates Ago, resulting in proteolysis of Ago and degradation of the released miRNAs. To date, the molecular mechanism of TDMD has not been studied in other species. To further characterize TDMD in animals, we investigated the protein Dora, the Drosophila ortholog of ZSWIM8, in the culture of Drosophila ovarian somatic cells (OSC). We showed that Dora in OSCs localizes in protein granules unrelated to P- and GW-bodies. The dora knockout resulted in the accumulation of multiple miRNAs, including miR-7-5p, and transcriptome-wide affected the mRNA targets of differentially expressed miRNAs. We also showed that Dora associates with proteins of the CRL3 complex, and the depletion of CRL3 components or inhibition of Cul3 neddylation upregulates miR-7-5p. We concluded that the molecular mechanism of TDMD is conserved in humans and Drosophila. Finally, we found that cells without Dora have an impaired Notch signaling pathway, indicating that TDMD in OSCs may contribute to the modulation of the Notch pathway.
靶定向miRNA降解(Target-directed miRNA degradation, TDMD)是通过ago结合miRNA与特异性互补RNA靶标的扩展配对,诱导动物miRNA稳定性的转录后调控过程。人类细胞培养的研究表明,与扩展双工结合的Ago被Cullin-RING-ligase复合物(CRL3)的ZSWIM8受体识别,该复合物还含有Cul3、EloB和EloC蛋白。在E2偶联蛋白UbcE2M的参与下,Cul3的类化修饰加速了CRL的活性。CRL泛素化Ago,导致Ago的蛋白水解和释放的mirna的降解。迄今为止,尚未在其他物种中研究TDMD的分子机制。为了进一步表征动物中的TDMD,我们在果蝇卵巢体细胞(OSC)培养中研究了ZSWIM8的果蝇同源蛋白Dora。我们发现Dora在OSCs中定位于与P-和gw -体无关的蛋白质颗粒中。dora基因敲除导致包括miR-7-5p在内的多个mirna的积累,并且转录组范围内影响差异表达mirna的mRNA靶标。我们还发现Dora与CRL3复合体的蛋白相关,CRL3成分的缺失或Cul3类化修饰的抑制可上调miR-7-5p。我们认为TDMD的分子机制在人类和果蝇中是保守的。最后,我们发现没有Dora的细胞Notch信号通路受损,表明OSCs中的TDMD可能参与了Notch通路的调节。
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引用次数: 0
Navigating the tumor landscape: VEGF, MicroRNAs, and the future of cancer treatment 导航肿瘤景观:VEGF, microrna和癌症治疗的未来
IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-05-03 DOI: 10.1016/j.bbagrm.2025.195091
K.P. Ameya, P.P. Ashikha Shirin Usman, Durairaj Sekar
Cancer progression is a multifaceted process influenced by complex interactions within the tumor microenvironment (TME). Central to these dynamics are Vascular Endothelial Growth Factor (VEGF) signalling and microRNA (miRNA) modulation, both of which play critical roles in tumor growth and angiogenesis. VEGF is essential for promoting blood vessel formation; however, its splice variant, VEGF165b, acts as an anti-angiogenic factor, presenting a paradox challenging conventional cancer therapies. Meanwhile, miRNAs regulate gene expression that significantly impacts tumor behaviour by targeting various mRNAs involved in signalling pathways. The interplay between VEGF and miRNAs opens new avenues for targeted therapies designed to disrupt the networks supporting tumor growth. Additionally, the concept of exploiting the unique properties of VEGF splice variants is being explored to develop novel treatments that enhance anti-angiogenic effects while minimizing side effects. Understanding this is crucial for advancing personalized therapies that can effectively address the challenges posed by tumor adaptability and resistance mechanisms.
癌症的进展是一个多方面的过程,受肿瘤微环境(TME)内复杂相互作用的影响。这些动态的核心是血管内皮生长因子(VEGF)信号传导和microRNA (miRNA)调节,两者在肿瘤生长和血管生成中起着关键作用。VEGF对促进血管形成至关重要;然而,它的剪接变体VEGF165b作为一种抗血管生成因子,提出了一个挑战传统癌症治疗的悖论。同时,miRNAs通过靶向参与信号通路的各种mrna来调节基因表达,显著影响肿瘤行为。VEGF和mirna之间的相互作用为靶向治疗开辟了新的途径,旨在破坏支持肿瘤生长的网络。此外,利用VEGF剪接变体的独特特性的概念正在被探索,以开发新的治疗方法,增强抗血管生成作用,同时最大限度地减少副作用。了解这一点对于推进个性化治疗至关重要,可以有效地解决肿瘤适应性和耐药机制带来的挑战。
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引用次数: 0
The crucial role of small heat shock proteins in prostate cancer: mechanisms and new therapeutic perspectives 小热休克蛋白在前列腺癌中的关键作用:机制和新的治疗前景
IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-04-11 DOI: 10.1016/j.bbagrm.2025.195090
Yuankang Feng , Jialu Ma , Zhihao Bo , Dan Yue , Yong Wang
As resistance to new anti-androgen drugs occurs more frequently, increasing numbers of researchers are exploring alternative key molecular targets for prostate cancer treatment. The small heat shock protein (sHSP) family is a subclass of heat shock proteins (HSPs). Due to the smaller molecular size of their monomers, they often function as large oligomeric complexes with diverse biological roles, thus garnering increasing attention from urologists. Different members of the sHSP family exhibit distinct biological roles in prostate cancer, offering a new perspective for precision therapy. In this review, we summarize the specific roles of sHSP family members in prostate cancer and analyze their similarities and differences. Additionally, we discuss and review the drugs targeting various sHSPs in prostate cancer, providing new insights into the exploration and further application of sHSP-targeted therapies.
随着新型抗雄激素药物耐药性的频繁发生,越来越多的研究人员正在探索前列腺癌治疗的其他关键分子靶点。小热休克蛋白(sHSP)家族是热休克蛋白的一个亚类。由于其单体的分子尺寸较小,它们通常作为具有多种生物学作用的大型寡聚复合物发挥作用,因此越来越受到泌尿科医生的关注。sHSP家族的不同成员在前列腺癌中表现出不同的生物学作用,为精准治疗提供了新的视角。本文就sHSP家族成员在前列腺癌中的具体作用进行综述,并分析其异同点。此外,我们还讨论和回顾了针对各种shsp在前列腺癌中的药物,为shsp靶向治疗的探索和进一步应用提供了新的见解。
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引用次数: 0
Genome-wide screening reveals repression by nuclear exosome as a prerequisite for intron-mediated enhancement in Saccharomyces cerevisiae 全基因组筛选显示核外泌体的抑制是酿酒酵母内含子介导的增强的先决条件
IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-04-10 DOI: 10.1016/j.bbagrm.2025.195089
Hiroki Kikuta , Shunya Takeda , Rinji Akada , Hisashi Hoshida
Introns can enhance gene expression, a phenomenon called intron-mediated enhancement (IME). Previously proposed IME mechanisms do not sufficiently explain the variability in enhancement levels, suggesting that IME mechanism has not been fully understood. A comprehensive screening of genes involved in IME can provide valuable insights. Recently, using a luciferase coding sequence (yCLuc), we showed that IME functions by relieving repression rather than simply enhancing expression. The expression of yCLuc is repressed by the specific nucleotide sequence UCUU, and adding an intron relieves this repression in the yeast Saccharomyces cerevisiae. Herein, genome-wide screenings were conducted using S. cerevisiae knockout strain libraries to identify genes involved in IME. For screening, yCLuc was expressed with and without an intron in knockout strains. Consequently, CDC73, a regulator of RNA polymerase II (RNAPII), was identified as essential for enhancement. Additionally, 23 genes specifically involved in the repression were identified. These 23 genes are related to nuclear exosomes, RNA modification, RNAPII regulation, the nuclear pore complex, ribosomes, and chromatin modification. Among these, genes associated with nuclear exosomes, which degrade various RNAs in the nucleus, showed the largest impact on expression. The RNA sequence UCUU has been reported as a target for RNA degradation by nuclear exosomes. These findings suggested that UCUU-containing coding sequences are primarily repressed via RNA degradation by the nuclear exosome through UCUU recognition, with this repression being relieved by the presence of an intron.
内含子可以增强基因表达,这种现象被称为内含子介导增强(IME)。先前提出的IME机制并不能充分解释增强水平的可变性,这表明IME机制尚未被完全理解。全面筛选与IME有关的基因可以提供有价值的见解。最近,利用荧光素酶编码序列(yCLuc),我们发现IME的功能是缓解抑制,而不仅仅是增强表达。yCLuc的表达受特定核苷酸序列UCUU的抑制,在酿酒酵母中加入内含子可以缓解这种抑制。本文利用酿酒葡萄球菌敲除菌株文库进行全基因组筛选,以鉴定与IME相关的基因。为了筛选,yCLuc在敲除菌株中有和没有内含子表达。因此,RNA聚合酶II (RNAPII)的调节因子CDC73被确定为增强的必要条件。此外,还鉴定了23个特异性参与抑制的基因。这23个基因与核外泌体、RNA修饰、RNAPII调控、核孔复合体、核糖体和染色质修饰有关。其中,与核外泌体相关的基因对表达的影响最大,核外泌体降解细胞核中的各种rna。RNA序列UCUU已被报道为核外泌体RNA降解的靶标。这些发现表明,含有UCUU的编码序列主要通过RNA降解被核外泌体通过UCUU识别抑制,而这种抑制被内含子的存在所缓解。
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Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
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