1. The Santa Ana River in the Los Angeles region of California demonstrates common habitat degradation symptoms that are characteristic of the urban stream syndrome. These impacts have altered the Santa Ana River community structure, with few species as impacted as the native Santa Ana sucker (sucker; Pantosteus santaanae). 2. Consequently, a recovery plan developed for sucker identified the need for a population viability analysis (PVA) to assess sucker extirpation risk. However, PVAs can be data-intensive and are subject to several sources of bias when standardized protocols are absent. 3. More than 20 years of sucker and arroyo chub (chub; Gila orcuttii) surveys using different methods were compiled to build an integrated hierarchical multi-population PVA to estimate trends in abundance and extirpation probability of these native fishes from the Santa Ana River. 4. PVA modelling indicated similar patterns in sucker and chub abundance along the Santa Ana River, with the highest abundance of both species in the upper regions of the river during the early 2000s and downstream in recent years (2018–2022). Extirpation risk was estimated to be greatest near wastewater treatment facilities, where native fish abundance estimates have been zero since 2018. Extirpation risk was lower downstream of the wastewater treatment facilities for both species, although extinction risk was higher for sucker than chub throughout the river. 5. As the model evolves and more data are collected, the PVA could be used to assess the effects of various management actions, such as non-native predator removals and native fish re-introductions, on sucker and chub persistence.
Freshwater wetlands are among the world's most valuable ecosystems, supporting diverse biota and critical ecological services, yet these habitats have suffered extensive and pervasive anthropogenic disturbance. Northern Australia represents a rare example of a relatively unmodified, vast wetland habitat. The freshwater crayfishes of the region are poorly documented, with one enigmatic species, the nutcracker yabby Cherax nucifraga, described from a single individual sampled opportunistically from the stomach of a predatory fish. Here we report on the rediscovery of C. nucifraga from a relatively limited distribution in semi-permanent coastal freshwater wetlands. Field studies were conducted to inform natural resource management and conservation. Genome skimming to recover mitogenomes, 18S–28S and histone sequences demonstrated a sister relationship with two congeners from the tropics, and moderate molecular genetic substructure was apparent within C. nucifraga between mainland and Melville Island locations. Cherax nucifraga is characterised by the presence of a strawberry-coloured soft patch on the outer margin of the claw, uniquely present in both mature males and females. Meristic and multivariate morphometric comparisons are made with the co-occurring redclaw Cherax quadricarinatus and the allopatric whiteclaw yabby Cherax bicarinatus, with a summary of diagnostic traits developed into a visual guide and key. Programs to further understand ecology, threats and traditional ecological knowledge will help to inform the future conservation management of the species in the face of increasing development and environmental change to northern Australian coastal freshwater wetlands. Specific conservation actions include identifying and protecting refuge habitats and preventing incursions by other Cherax species.
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