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Data Visualization Using R for Researchers Who Do Not Use R 不使用R的研究人员使用R的数据可视化
IF 13.6 1区 心理学 Q1 PSYCHOLOGY Pub Date : 2022-04-01 DOI: 10.1177/25152459221074654
E. Nordmann, P. McAleer, Wilhelmiina Toivo, H. Paterson, L. DeBruine
In addition to benefiting reproducibility and transparency, one of the advantages of using R is that researchers have a much larger range of fully customizable data visualizations options than are typically available in point-and-click software because of the open-source nature of R. These visualization options not only look attractive but also can increase transparency about the distribution of the underlying data rather than relying on commonly used visualizations of aggregations, such as bar charts of means. In this tutorial, we provide a practical introduction to data visualization using R specifically aimed at researchers who have little to no prior experience of using R. First, we detail the rationale for using R for data visualization and introduce the “grammar of graphics” that underlies data visualization using the ggplot package. The tutorial then walks the reader through how to replicate plots that are commonly available in point-and-click software, such as histograms and box plots, and shows how the code for these “basic” plots can be easily extended to less commonly available options, such as violin box plots. The data set and code used in this tutorial and an interactive version with activity solutions, additional resources, and advanced plotting options are available at https://osf.io/bj83f/.
除了有利于再现性和透明度外,使用R的优势之一是,由于R的开源性质,研究人员拥有比点击式软件中通常可用的更大范围的完全可定制的数据可视化选项。这些可视化选项不仅看起来很有吸引力,而且可以提高基础数据分布的透明度,而不是依赖于常用的聚合可视化,如均值条形图。在本教程中,我们提供了使用R进行数据可视化的实用介绍,专门针对之前几乎没有使用R经验的研究人员。首先,我们详细介绍了使用R实现数据可视化的基本原理,并介绍了使用ggplot包进行数据可视化所依据的“图形语法”。然后,本教程将引导读者了解如何复制点击式软件中常见的绘图,如直方图和方框图,并展示如何将这些“基本”绘图的代码轻松扩展到不太常见的选项,如小提琴方框图。本教程中使用的数据集和代码以及包含活动解决方案、其他资源和高级打印选项的交互式版本可在https://osf.io/bj83f/.
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引用次数: 4
Analyzing GPS Data for Psychological Research: A Tutorial 分析GPS数据进行心理研究:教程
IF 13.6 1区 心理学 Q1 PSYCHOLOGY Pub Date : 2022-04-01 DOI: 10.1177/25152459221082680
Sandrine R. Müller, J. Bayer, M. Ross, Jerry Mount, Clemens Stachl, Gabriella M. Harari, Yung-Ju Chang, Huyen T. K. Le
The ubiquity of location-data-enabled devices provides novel avenues for psychology researchers to incorporate spatial analytics into their studies. Spatial analytics use global positioning system (GPS) data to assess and understand mobility behavior (e.g., locations visited, movement patterns). In this tutorial, we provide a practical guide to analyzing GPS data in R and introduce researchers to key procedures and resources for conducting spatial analytics. We show readers how to clean GPS data, compute mobility features (e.g., time spent at home, number of unique places visited), and visualize locations and movement patterns. In addition, we discuss the challenges of ensuring participant privacy and interpreting the psychological implications of mobility behaviors. The tutorial is accompanied by an R Markdown script and a simulated GPS data set made available on the OSF.
无处不在的位置数据设备为心理学研究人员将空间分析纳入他们的研究提供了新的途径。空间分析使用全球定位系统(GPS)数据来评估和理解移动行为(例如,访问过的位置,移动模式)。在本教程中,我们提供了在R中分析GPS数据的实用指南,并向研究人员介绍了进行空间分析的关键程序和资源。我们向读者展示了如何清理GPS数据,计算移动性特征(例如,在家里度过的时间,访问的独特地点的数量),以及可视化位置和运动模式。此外,我们讨论了确保参与者隐私和解释移动行为的心理含义的挑战。本教程附有R Markdown脚本和OSF上提供的模拟GPS数据集。
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引用次数: 4
Comparing Analysis Blinding With Preregistration in the Many-Analysts Religion Project 多分析师宗教项目中分析盲法与预登记的比较
IF 13.6 1区 心理学 Q1 PSYCHOLOGY Pub Date : 2022-01-21 DOI: 10.1177/25152459221128319
A. Sarafoglou, S. Hoogeveen, E. Wagenmakers
In psychology, preregistration is the most widely used method to ensure the confirmatory status of analyses. However, the method has disadvantages: Not only is it perceived as effortful and time-consuming, but reasonable deviations from the analysis plan demote the status of the study to exploratory. An alternative to preregistration is analysis blinding, in which researchers develop their analysis on an altered version of the data. In this experimental study, we compare the reported efficiency and convenience of the two methods in the context of the Many-Analysts Religion Project. In this project, 120 teams answered the same research questions on the same data set, either preregistering their analysis (n = 61) or using analysis blinding (n = 59). Our results provide strong evidence (Bayes factor [BF] = 71.40) for the hypothesis that analysis blinding leads to fewer deviations from the analysis plan, and if teams deviated, they did so on fewer aspects. Contrary to our hypothesis, we found strong evidence (BF = 13.19) that both methods required approximately the same amount of time. Finally, we found no and moderate evidence on whether analysis blinding was perceived as less effortful and frustrating, respectively. We conclude that analysis blinding does not mean less work, but researchers can still benefit from the method because they can plan more appropriate analyses from which they deviate less frequently.
在心理学中,预先登记是确保分析的验证性状态的最广泛使用的方法。然而,该方法也有缺点:它不仅被认为是费力和耗时的,而且与分析计划的合理偏差将研究的地位降级为探索性的。预登记的另一种选择是分析盲法,即研究人员对数据的修改版本进行分析。在这项实验研究中,我们在多分析师宗教项目的背景下比较了两种方法的效率和便利性。在这个项目中,120个团队在相同的数据集上回答了相同的研究问题,要么预先注册他们的分析(n=61),要么使用分析盲法(n=59)。我们的结果为以下假设提供了有力的证据(贝叶斯因子[BF]=7.40),即分析盲法会导致与分析计划的偏差减少,如果团队出现偏差,他们会在更少的方面出现偏差。与我们的假设相反,我们发现了强有力的证据(BF=13.19),表明两种方法所需的时间大致相同。最后,我们分别没有和适度的证据表明分析盲法是否被认为不那么费力和令人沮丧。我们得出的结论是,分析盲法并不意味着工作量减少,但研究人员仍然可以从该方法中受益,因为他们可以计划更合适的分析,而偏离的频率较低。
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引用次数: 5
Four Internal Inconsistencies in Tversky and Kahneman’s (1992) Cumulative Prospect Theory Article: A Case Study in Ambiguous Theoretical Scope and Ambiguous Parsimony Tversky和Kahneman(1992)累积前景理论文章中的四个内在矛盾:以模糊理论范围和模糊简约为例
IF 13.6 1区 心理学 Q1 PSYCHOLOGY Pub Date : 2022-01-01 DOI: 10.1177/25152459221074653
Michel Regenwetter, M. Robinson, Cihang Wang
Scholars heavily rely on theoretical scope as a tool to challenge existing theory. We advocate that scientific discovery could be accelerated if far more effort were invested into also overtly specifying and painstakingly delineating the intended purview of any proposed new theory at the time of its inception. As a case study, we consider Tversky and Kahneman (1992). They motivated their Nobel-Prize-winning cumulative prospect theory with evidence that in each of two studies, roughly half of the participants violated independence, a property required by expected utility theory (EUT). Yet even at the time of inception, new theories may reveal signs of their own limited scope. For example, we show that Tversky and Kahneman’s findings in their own test of loss aversion provide evidence that at least half of their participants violated their theory, in turn, in that study. We highlight a combination of conflicting findings in the original article that make it ambiguous to evaluate both cumulative prospect theory’s scope and its parsimony on the authors’ own evidence. The Tversky and Kahneman article is illustrative of a social and behavioral research culture in which theoretical scope plays an extremely asymmetric role: to call existing theory into question and motivate surrogate proposals.
学者们严重依赖理论范围作为挑战现有理论的工具。我们主张,如果在任何新理论提出之初,就投入更多的努力,公开地说明和煞费苦心地描绘其预期的范围,那么科学发现可能会加速。作为一个案例研究,我们考虑了Tversky和Kahneman(1992)。他们的累积前景理论获得了诺贝尔奖,他们在两项研究中都有证据表明,大约一半的参与者违反了独立性,这是预期效用理论(EUT)所要求的属性。然而,即使在开始的时候,新的理论也可能显示出它们自己有限的范围的迹象。例如,我们表明,Tversky和Kahneman在他们自己的损失厌恶测试中的发现提供了证据,证明至少有一半的参与者在该研究中违反了他们的理论。我们强调了原始文章中相互矛盾的发现,这使得评估累积前景理论的范围和作者自己的证据的简约性变得模棱两可。Tversky和Kahneman的文章说明了一种社会和行为研究文化,在这种文化中,理论范围扮演着极其不对称的角色:对现有理论提出质疑,并激发替代建议。
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引用次数: 1
PsyBuilder: An Open-Source, Cross-Platform Graphical Experiment Builder for Psychtoolbox With Built-In Performance Optimization PsyBuilder:一个开源的,跨平台的图形实验生成器,用于心理工具箱,内置性能优化
IF 13.6 1区 心理学 Q1 PSYCHOLOGY Pub Date : 2022-01-01 DOI: 10.1177/25152459211070573
Z Lin, Zhe Yang, Chengzhi Feng, Yang Zhang
Psychtoolbox is among the most popular open-source software packages for stimulus presentation and response collection. It provides flexibility and power in the choice of stimuli and responses, in addition to precision in control and timing. However, Psychtoolbox requires coding in MATLAB (or its equivalent, e.g., Octave). Scripting is challenging to learn and can lead to timing inaccuracies unwittingly. It can also be time-consuming and error prone even for experienced users. We have developed the first general-purpose graphical experiment builder for Psychtoolbox, called PsyBuilder, for both new and experienced users. The builder allows users to graphically implement sophisticated experimental tasks through intuitive drag and drop without the need to script. The output codes have built-in optimized timing precision and come with detailed comments to facilitate customization. Because users can see exactly how the code changes in response to modifications in the graphical interface, PsyBuilder can also bolster the understanding of programming in ways that were not previously possible. In this tutorial, we first describe its interface, then walk the reader through the graphical building process using a concrete experiment, and finally address important issues from the perspective of potential adopters.
Psychtoolbox是用于刺激演示和响应收集的最受欢迎的开源软件包之一。它在选择刺激和反应方面提供了灵活性和力量,此外在控制和计时方面也提供了精确性。然而,Psychtoolbox需要在MATLAB(或其等效工具,例如Octave)中进行编码。编写脚本很难学习,可能会在无意中导致时间不准确。即使对于经验丰富的用户来说,它也可能耗时且容易出错。我们为Psychtoolbox开发了第一个通用图形实验生成器,名为PsyBuilder,适用于新用户和有经验的用户。该构建器允许用户通过直观的拖放以图形方式实现复杂的实验任务,而无需编写脚本。输出代码具有内置的优化计时精度,并带有详细的注释,以便于定制。因为用户可以准确地看到代码是如何响应图形界面中的修改而变化的,PsyBuilder还可以以以前不可能的方式增强对编程的理解。在本教程中,我们首先描述了它的界面,然后通过具体的实验引导读者完成图形构建过程,最后从潜在采用者的角度解决重要问题。
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引用次数: 1
SampleSizePlanner: A Tool to Estimate and Justify Sample Size for Two-Group Studies SampleSizePlanner:一个估计和证明两组研究样本大小的工具
IF 13.6 1区 心理学 Q1 PSYCHOLOGY Pub Date : 2022-01-01 DOI: 10.1177/25152459211054059
Márton Kovács, D. van Ravenzwaaij, Rink Hoekstra, B. Aczel
Planning sample size often requires researchers to identify a statistical technique and to make several choices during their calculations. Currently, there is a lack of clear guidelines for researchers to find and use the applicable procedure. In the present tutorial, we introduce a web app and R package that offer nine different procedures to determine and justify the sample size for independent two-group study designs. The application highlights the most important decision points for each procedure and suggests example justifications for them. The resulting sample-size report can serve as a template for preregistrations and manuscripts.
计划样本大小通常需要研究人员确定一种统计技术,并在计算过程中做出几种选择。目前,缺乏明确的指导方针,供研究人员寻找和使用适用的程序。在本教程中,我们介绍了一个web应用程序和R包,它提供了九种不同的程序来确定和证明独立的两组研究设计的样本量。该应用程序突出显示每个过程最重要的决策点,并为它们提供示例论证。生成的样本大小报告可以作为预注册和文稿的模板。
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引用次数: 8
Caution, Preprint! Brief Explanations Allow Nonscientists to Differentiate Between Preprints and Peer-Reviewed Journal Articles 谨慎,预印!简短的解释可以让非科学家区分预印本和同行评议的期刊文章
IF 13.6 1区 心理学 Q1 PSYCHOLOGY Pub Date : 2022-01-01 DOI: 10.1177/25152459211070559
Tobias Wingen, J. Berkessel, S. Dohle
A growing number of psychological research findings are initially published as preprints. Preprints are not peer reviewed and thus did not undergo the established scientific quality-control process. Many researchers hence worry that these preprints reach nonscientists, such as practitioners, journalists, and policymakers, who might be unable to differentiate them from the peer-reviewed literature. Across five studies in Germany and the United States, we investigated whether this concern is warranted and whether this problem can be solved by providing nonscientists with a brief explanation of preprints and the peer-review process. Studies 1 and 2 showed that without an explanation, nonscientists perceive research findings published as preprints as equally credible as findings published as peer-reviewed articles. However, an explanation of the peer-review process reduces the credibility of preprints (Studies 3 and 4). In Study 5, we developed and tested a shortened version of this explanation, which we recommend adding to preprints. This explanation again allowed nonscientists to differentiate between preprints and the peer-reviewed literature. In sum, our research demonstrates that even a short explanation of the concept of preprints and their lack of peer review allows nonscientists who evaluate scientific findings to adjust their credibility perception accordingly. This would allow harvesting the benefits of preprints, such as faster and more accessible science communication, while reducing concerns about public overconfidence in the presented findings.
越来越多的心理学研究结果最初以预印本的形式发表。预印本没有经过同行评审,因此没有经过既定的科学质量控制程序。因此,许多研究人员担心,这些预印本会接触到非科学家,如从业者、记者和政策制定者,他们可能无法将其与同行评审的文献区分开来。在德国和美国的五项研究中,我们调查了这种担忧是否合理,以及是否可以通过向非科学家简要解释预印本和同行评审过程来解决这个问题。研究1和2表明,在没有解释的情况下,非科学家认为以预印本形式发表的研究结果与以同行评审文章形式发表的结果同等可信。然而,对同行评审过程的解释会降低预印本的可信度(研究3和4)。在研究5中,我们开发并测试了这一解释的缩短版本,我们建议将其添加到预印本中。这种解释再次允许非科学家区分预印本和同行评审的文献。总之,我们的研究表明,即使是对预印本的概念及其缺乏同行评审的简短解释,也可以让评估科学发现的非科学家相应地调整他们的可信度。这将有助于获得预印本的好处,例如更快、更容易获得的科学交流,同时减少公众对所提出的研究结果过度自信的担忧。
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引用次数: 13
These Are Not the Effects You Are Looking for: Causality and the Within-/Between-Persons Distinction in Longitudinal Data Analysis 这些不是你要找的结果:纵向数据分析中的因果关系和人内/人之间的区别
IF 13.6 1区 心理学 Q1 PSYCHOLOGY Pub Date : 2021-10-11 DOI: 10.1177/25152459221140842
J. Rohrer, K. Murayama
In psychological science, researchers often pay particular attention to the distinction between within- and between-persons relationships in longitudinal data analysis. Here, we aim to clarify the relationship between the within- and between-persons distinction and causal inference and show that the distinction is informative but does not play a decisive role in causal inference. Our main points are threefold. First, within-persons data are not necessary for causal inference; for example, between-persons experiments can inform about (average) causal effects. Second, within-persons data are not sufficient for causal inference; for example, time-varying confounders can lead to spurious within-persons associations. Finally, despite not being sufficient, within-persons data can be tremendously helpful for causal inference. We provide pointers to help readers navigate the more technical literature on longitudinal models and conclude with a call for more conceptual clarity: Instead of letting statistical models dictate which substantive questions researchers ask, researchers should start with well-defined theoretical estimands, which in turn determine both study design and data analysis.
在心理科学中,研究者经常在纵向数据分析中特别注意人与人之间和人与人之间关系的区别。在这里,我们的目的是澄清人与人之间的区别和因果推理之间的关系,并表明这种区别是信息性的,但在因果推理中并不起决定性作用。我们的主要观点有三点。首先,个人数据对于因果推理是不必要的;例如,人与人之间的实验可以告知(平均)因果效应。第二,个人数据不足以进行因果推理;例如,时变混杂因素可能导致虚假的人际关系。最后,尽管不充分,但个人数据对因果推理非常有帮助。我们提供了一些指针,帮助读者浏览更多关于纵向模型的技术文献,并以呼吁更清晰的概念来结束:而不是让统计模型决定研究人员提出的实质性问题,研究人员应该从定义良好的理论估计开始,这反过来又决定了研究设计和数据分析。
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引用次数: 26
Doing Better Data Visualization 更好地实现数据可视化
IF 13.6 1区 心理学 Q1 PSYCHOLOGY Pub Date : 2021-10-01 DOI: 10.1177/25152459211045334
Eric Hehman, Sally Y. Xie
Methods in data visualization have rapidly advanced over the past decade. Although social scientists regularly need to visualize the results of their analyses, they receive little training in how to best design their visualizations. This tutorial is for individuals whose goal is to communicate patterns in data as clearly as possible to other consumers of science and is designed to be accessible to both experienced and relatively new users of R and ggplot2. In this article, we assume some basic statistical and visualization knowledge and focus on how to visualize rather than what to visualize. We distill the science and wisdom of data-visualization expertise from books, blogs, and online forum discussion threads into recommendations for social scientists looking to convey their results to other scientists. Overarching design philosophies and color decisions are discussed before giving specific examples of code in R for visualizing central tendencies, proportions, and relationships between variables.
在过去的十年里,数据可视化方法得到了迅速的发展。尽管社会科学家经常需要将他们的分析结果可视化,但他们很少接受如何最好地设计可视化的培训。本教程适用于目标是尽可能清晰地与其他科学消费者交流数据模式的个人,旨在让R和ggplot2的经验丰富的用户和相对较新的用户都能访问。在这篇文章中,我们假设一些基本的统计和可视化知识,并关注如何可视化,而不是可视化什么。我们从书籍、博客和在线论坛讨论线程中提取数据可视化专业知识的科学性和智慧,为希望将其结果传达给其他科学家的社会科学家提供建议。在给出R中用于可视化中心趋势、比例和变量之间关系的代码的具体示例之前,讨论了总体设计理念和颜色决策。
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引用次数: 9
The Failings of Conventional Mediation Analysis and a Design-Based Alternative 传统中介分析的失败与基于设计的替代方案
IF 13.6 1区 心理学 Q1 PSYCHOLOGY Pub Date : 2021-10-01 DOI: 10.1177/25152459211047227
John G. Bullock, D. Green
Scholars routinely test mediation claims by using some form of measurement-of-mediation analysis whereby outcomes are regressed on treatments and mediators to assess direct and indirect effects. Indeed, it is rare for an issue of any leading journal of social or personality psychology not to include such an analysis. Statisticians have for decades criticized this method on the grounds that it relies on implausible assumptions, but these criticisms have been largely ignored. After presenting examples and simulations that dramatize the weaknesses of the measurement-of-mediation approach, we suggest that scholars instead use an approach that is rooted in experimental design. We propose implicit-mediation analysis, which adds and subtracts features of the treatment in ways that implicate some mediators and not others. We illustrate the approach with examples from recently published articles, explain the differences between the approach and other experimental approaches to mediation, and formalize the assumptions and statistical procedures that allow researchers to learn from experiments that encourage changes in mediators.
学者们通常通过使用某种形式的调解分析来测试调解主张,通过这种分析,对治疗和调解的结果进行回归,以评估直接和间接影响。事实上,任何一期主流的社会或人格心理学杂志都很少不包含这样的分析。几十年来,统计学家一直批评这种方法,理由是它依赖于难以置信的假设,但这些批评在很大程度上被忽视了。在列举了突出中介测量方法弱点的例子和模拟之后,我们建议学者们使用一种植根于实验设计的方法。我们提出了内隐中介分析,它以涉及某些中介而不涉及其他中介的方式增加和减少治疗的特征。我们用最近发表的文章中的例子来说明这种方法,解释这种方法与其他中介实验方法之间的差异,并将假设和统计程序形式化,使研究人员能够从鼓励中介改变的实验中学习。
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引用次数: 28
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