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RpoN mediates biofilm formation by directly controlling vps gene cluster and c-di-GMP synthetic metabolism in V. alginolyticus RpoN通过直接控制溶藻弧菌vps基因簇和c-di-GMP合成代谢介导生物膜的形成。
IF 5.9 Q1 MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2024-12-15 DOI: 10.1016/j.bioflm.2024.100242
Na Zhang , Yanhua Zeng , Jiachengzi Ye , Chuancao Lin , Xiaoxiao Gong , Hao Long , Haimin Chen , Zhenyu Xie
Vibrio alginolyticus is a prevalent pathogen in both humans and marine species, exhibiting high adaptability to various adverse environmental conditions. Our previous studies have shown that ΔrpoN formed three enhanced biofilm types, including spectacular surface-attached biofilm (SB), scattered pellicle biofilm (PB), and colony rugosity. However, the precise mechanism through which rpoN regulates biofilm formation has remained unclear. Based on the critical role of Vibrio exopolysaccharide (VPS) in biofilm formation, several genes related to the production and regulation of VPS were characterized in V. alginolyticus. Our findings from mutant strains indicated that VPS has complete control over the formation of rugose colony morphology and PB, while it only partially contributes to SB formation. Among the four transcriptional regulators of the vps gene cluster, vpsR and VA3545 act as promoters, whereas VA3546 and VA2703 function as repressors. Through transcriptome analysis and c-di-GMP concentration determination, VA0356 and VA3580 which encoded diguanylate cyclase were found to mediate the ΔrpoN biofilm formation. As a central regulator, rpoN governed biofilm formation through two regulatory pathways. Firstly, it directly bound to the upstream region of VA4206 to regulate the expression of the vps gene cluster (VA4206-VA4196). Secondly, it directly and indirectly modulated c-di-GMP synthesis gene VA3580 and VA0356, respectively, thereby affecting c-di-GMP concentration and subsequently influencing the expression of vps transcription activators vpsR and VA3545. Under conditions promoting SB formation, ΔrpoN was unable to thrive below the liquid level due to significantly reduced activities of three catalytic enzymes (ACK, ADH, and ALDH) involved in pyruvate metabolism, but tended to reproduce in air-liquid interface, a high oxygen niche compared to the liquid phase. In conclusion, both exopolysaccharide synthesis and oxygen-related metabolism contributed to ΔrpoN biofilm formation. The role of RpoN-mediated hypoxic metabolism and biofilm formation were crucial for comprehending the colonization and pathogenicity of V. alginolyticus in hosts, providing a novel target for treating V. alginolyticus in aquatic environments and hosts.
溶藻弧菌是一种在人类和海洋物种中普遍存在的病原体,对各种不利环境条件具有很高的适应性。我们之前的研究表明ΔrpoN形成了三种增强的生物膜类型,包括壮观的表面附着生物膜(SB)、分散的膜膜(PB)和菌落褶皱性。然而,rpoN调控生物膜形成的确切机制尚不清楚。基于胞外多糖弧菌(Vibrio exopolysaccharide, VPS)在生物膜形成中的关键作用,研究了溶藻弧菌胞外多糖(Vibrio exopolysaccharide, VPS)产生和调控的相关基因。突变株的研究结果表明,VPS完全控制了rugose菌落形态和PB的形成,而对SB的形成仅起部分作用。在vps基因簇的四个转录调控因子中,vpsR和VA3545作为启动子,而VA3546和VA2703作为抑制子。通过转录组分析和c-di-GMP浓度测定,发现编码二胍酸环化酶的VA0356和VA3580介导ΔrpoN生物膜的形成。作为中心调控因子,rpoN通过两种调控途径调控生物膜的形成。首先,它直接与VA4206上游区域结合,调控vps基因簇(VA4206- va4196)的表达。其次,直接和间接调节c-di-GMP合成基因VA3580和VA0356,从而影响c-di-GMP浓度,进而影响vps转录激活因子vpsR和VA3545的表达。在促进SB形成的条件下,由于参与丙酮酸代谢的三种催化酶(ACK、ADH和ALDH)活性显著降低,ΔrpoN无法在液面以下繁殖,而倾向于在气液界面繁殖,这是一个比液相高的氧生态位。综上所述,胞外多糖的合成和氧相关代谢都有助于ΔrpoN生物膜的形成。rpo介导的缺氧代谢和生物膜的形成对了解溶藻弧菌在宿主体内的定植和致病性至关重要,为在水生环境和宿主中治疗溶藻弧菌提供了新的靶点。
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引用次数: 0
Decoding interactions between biofilms and DNA nanoparticles 解码生物膜和DNA纳米颗粒之间的相互作用
IF 5.9 Q1 MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-02-06 DOI: 10.1016/j.bioflm.2025.100260
Alexandra Sousa , Rutuparna Kulkarni , Mona Johannessen , Thorsten Wohland , Nataša Škalko-Basnet , Sybil Obuobi
Biofilms present a great challenge in antimicrobial therapy due to their inherent tolerance to conventional antibiotics, promoting the need for advanced drug delivery strategies that improve therapy. While various nanoparticles (NPs) have been reported for this purpose, DNA-based NPs remain a largely unexploited resource against biofilm-associated infections. To fill this gap and to lay the groundwork for their potential therapeutic exploitation, we investigated the diffusion, penetration, and retention behaviors of three DNA-based nanocarriers —plain or modified—within P. aeruginosa biofilms. Watson-Crick base pairing or hydrophobic interactions mediated the formation of the plain NPs whilst electrostatic interaction enabled optimization of coated NPs via microfluidic mixing. We assessed the interactions of the nanocarriers with biofilm structures via Single Plane Illumination Microscopy – Fluorescence Correlation Spectroscopy (SPIM-FCS) and Confocal Laser Scanning Microscopy (CLSM). We demonstrate the impact of microfluidic parameters on the physicochemical properties of the modified DNA NPs and their subsequent distinct behaviors in the biofilm. Our results show that single stranded DNA micelles (ssDNA micelle) and tetrahedral DNA nanostructures (TDN) had similar diffusion and penetration profiles, whereas chitosan-coated TDN (TDN-Chit) showed reduced diffusion and increased biofilm retention. This is attributable to the relatively larger size and positive surface charge of the TDN-Chit NPs. The study shows first and foremost that DNA can be used as building block in drug delivery for antibiofilm therapeutics. Moreover, the overall behavioral findings are pivotal for the strategic selection of therapeutic agents to be encapsulated within these structures, possibly affecting the treatment efficacy. This research not only highlights the underexplored potential of DNA-based NPs in antibiofilm therapy but also advocates for further studies using different optimization strategies to refine these nanocarrier systems for targeted treatments in biofilm-related infections.
由于生物膜对传统抗生素的固有耐受性,生物膜在抗菌治疗中提出了巨大的挑战,促进了对先进药物递送策略的需求,以改善治疗。虽然各种纳米颗粒(NPs)已被报道用于此目的,但基于dna的NPs仍然是一种很大程度上未开发的对抗生物膜相关感染的资源。为了填补这一空白并为其潜在的治疗开发奠定基础,我们研究了三种基于dna的纳米载体(普通的或修饰的)在铜绿假单胞菌生物膜中的扩散、渗透和保留行为。沃森-克里克碱基配对或疏水相互作用介导了平面NPs的形成,而静电相互作用通过微流体混合实现了涂覆NPs的优化。我们通过单平面照明显微镜-荧光相关光谱(SPIM-FCS)和共聚焦激光扫描显微镜(CLSM)评估了纳米载体与生物膜结构的相互作用。我们展示了微流控参数对修饰DNA NPs的物理化学性质及其随后在生物膜中的不同行为的影响。我们的研究结果表明,单链DNA胶束(ssDNA胶束)和四面体DNA纳米结构(TDN)具有相似的扩散和渗透特征,而壳聚糖包覆的TDN (TDN- chit)则表现出扩散减少和生物膜保留增加的特征。这是由于TDN-Chit NPs的尺寸和表面正电荷相对较大。这项研究首先表明,DNA可以作为抗生素生物膜疗法药物输送的基石。此外,整体行为学研究结果对战略性选择治疗药物至关重要,这些药物被封装在这些结构中,可能会影响治疗效果。本研究不仅强调了基于dna的NPs在抗生物膜治疗中的潜力,而且提倡进一步研究使用不同的优化策略来完善这些纳米载体系统,以靶向治疗生物膜相关感染。
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引用次数: 0
Nanowire arrays with programmable geometries as a highly effective anti-biofilm surface 具有可编程几何形状的纳米线阵列作为一种高效的抗生物膜表面
IF 5.9 Q1 MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-03-24 DOI: 10.1016/j.bioflm.2025.100275
Marina A. George , David McGiffin , Anton Y. Peleg , Roey Elnathan , David M. Kaye , Yue Qu , Nicolas H. Voelcker
Biofilm-related microbial infections are the Achilles’ heel of many implantable medical devices. Surface patterning with nanostructures in the form of vertically aligned silicon (Si) nanowires (VA-SiNWs) holds promise to prevent these often “incurable” infections. In this study, we fabricated arrays of highly ordered SiNWs varying in three geometric parameters, including height, pitch size, and tip diameter (sharpness). Anti-infective efficacies of fabricated SiNW arrays were assessed against representative laboratory reference bacterial strains, Staphylococcus aureus ATCC 25923 and Escherichia coli ATCC 25922, using a modified microwell biofilm assay representing microorganism-implant interactions at a liquid-solid interface. To further understand the role of individual geometric parameters to the SiNW-induced bacterial killing, SiNW arrays with stepwise changes in individual geometric parameters were compared. The force that NWs applied on bacterial cells was mathematically calculated. Our results suggested that NWs with specific geometries were able to kill adherent bacterial cells and prevent further biofilm formation on biomaterial surfaces. Tip diameter and pitch size appeared to be key factors of nanowires predetermining their anti-infectiveness. Mechanistic investigation found that tip diameter and pitch size co-determined the pressure that NWs put on the cell envelope. The most effective anti-infective NWs fabricated in our study (50 nm in tip diameter and 400 nm in pitch size for S. aureus and 50 nm in tip diameter and 800 nm in pitch size for E. coli) put pressures of approximately 2.79 Pa and 8.86 Pa to the cell envelop of S. aureus and E. coli, respectively, and induced cell lyses. In addition, these NWs retained their activities against clinical isolates of S. aureus and E. coli from patients with confirmed device-related infections and showed little toxicity against human fibroblast cells and red blood cells.
生物膜相关的微生物感染是许多植入式医疗器械的致命弱点。以垂直排列的硅(Si)纳米线(VA-SiNWs)形式的纳米结构的表面图案有望预防这些通常“无法治愈”的感染。在这项研究中,我们制造了高度有序的sinw阵列,其几何参数包括高度、节距大小和尖端直径(锐度)。采用改进的微孔生物膜法,对制备的SiNW阵列对代表性实验室参考菌株金黄色葡萄球菌(Staphylococcus aureus) ATCC 25923和大肠杆菌(Escherichia coli) ATCC 25922的抗感染效果进行了评估,该方法代表了微生物与植入物在液固界面的相互作用。为了进一步了解单个几何参数对SiNW诱导细菌杀灭的作用,我们比较了单个几何参数逐步变化的SiNW阵列。用数学方法计算了NWs对细菌细胞施加的力。我们的研究结果表明,具有特定几何形状的NWs能够杀死附着的细菌细胞,并阻止生物材料表面进一步形成生物膜。针尖直径和节距大小是决定纳米线抗感染能力的关键因素。机制研究发现,尖端直径和节距大小共同决定了NWs对细胞包膜施加的压力。本研究制备的最有效的抗感染NWs(金黄色葡萄球菌的尖端直径为50 nm,间距为400 nm,大肠杆菌的尖端直径为50 nm,间距为800 nm)分别对金黄色葡萄球菌和大肠杆菌的细胞膜施加约2.79 Pa和8.86 Pa的压力,并诱导细胞裂解。此外,这些NWs保留了对临床分离的金黄色葡萄球菌和大肠杆菌的活性,这些临床分离的金黄色葡萄球菌和大肠杆菌来自确诊的器械相关感染的患者,并且对人成纤维细胞和红细胞的毒性很小。
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引用次数: 0
Assessing the impact of UV-C exposure on pre-existing cultured marine diatom biofilms 评估UV-C暴露对预先培养的海洋硅藻生物膜的影响
IF 5.9 Q1 MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-05-10 DOI: 10.1016/j.bioflm.2025.100285
Kailey N. Richard , Andrew Palmer , Geoffrey Swain , Kelli Z. Hunsucker
Ultraviolet-C (UV–C) has been considered as a potential tool in the maintenance and prevention of marine biofouling. However, it is unclear how irradiation disturbs biofouling, specifically biofilms, or the duration and frequency needed to reduce or eliminate their growth. The marine diatom, Navicula incerta, was used in a two-part lab study to determine the minimum time between UV-C duty cycling (also known as interval testing) that would result in the reduction and prevention of marine biofilms. The first study assessed the diatom's metabolic activity, morphology, behavior, and recovery to understand the influence of UV-C on the biofilm. Cell viability, biofilm matrixes, and chlorophyll a were significantly reduced immediately following UV-C exposure, yet when exposure was ceased biofilms began to recover. Based on these results, the second study investigated the duty cycle duration required to limit the growth of the cultured biofilm. Duty cycle testing was able to initially deplete cell viability and chlorophyll a; however, in between exposures, recovery was evident. These findings indicate that shorter (10 min; 1.86 J/cm2) doses of UV-C exposures must be applied more frequently than more prolonged doses (60 min; 11.16 J/cm2) to keep biofilm formation minimal. The duty cycles established here also provide a guideline of efficacy for future studies that can be applied to biofilms in both laboratory and the field.
紫外- c (UV-C)被认为是一种潜在的维护和预防海洋生物污染的工具。然而,目前尚不清楚辐照如何干扰生物污垢,特别是生物膜,以及减少或消除其生长所需的持续时间和频率。一项由两部分组成的实验室研究使用了海洋硅藻Navicula incerta,以确定UV-C占空循环(也称为间隔测试)之间的最短时间,这将导致海洋生物膜的减少和预防。第一项研究评估了硅藻的代谢活性、形态、行为和恢复,以了解UV-C对生物膜的影响。暴露于UV-C后,细胞活力、生物膜基质和叶绿素a立即显著降低,但当暴露停止后,生物膜开始恢复。基于这些结果,第二项研究调查了限制培养生物膜生长所需的占空比持续时间。占空比测试能够最初耗尽细胞活力和叶绿素a;然而,在两次曝光之间,复苏是明显的。这些结果表明较短(10分钟;1.86 J/cm2)剂量的UV-C照射必须比较长时间的剂量(60分钟;11.16 J/cm2),使生物膜形成最小化。这里建立的占空比也为未来的研究提供了功效指南,可以应用于实验室和现场的生物膜。
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引用次数: 0
Surfactin accelerates Bacillus subtilis pellicle biofilm development 表面素促进枯草芽孢杆菌膜生物膜发育。
IF 5.9 Q1 MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2024-12-30 DOI: 10.1016/j.bioflm.2024.100249
Rune Overlund Stannius , Sarah Fusco , Michael S. Cowled , Ákos T. Kovács
Surfactin is a biosurfactant produced by many B. subtilis strains with a wide variety of functions from lowering surface tension to allowing motility of bacterial swarms, acting as a signaling molecule, and even exhibiting antimicrobial activities. However, the impact of surfactin during biofilm formation has been debated with variable findings between studies depending on the experimental conditions.
B. subtilis is known to form biofilms at the solid-air, the solid-medium, and the liquid-air interfaces, the latter of which is known as a pellicle biofilm. Pellicle formation is a complex process requiring coordinated movement to the liquid-air interface and subsequent cooperative production of biofilm matrix components to allow robust pellicle biofilm formation. This makes pellicle formation a promising model system for assaying factors in biofilm formation and regulation.
Here, we assayed the influence of surfactin and additional metabolites on the timing of pellicle biofilm formation. Using time-lapse imaging, we assayed pellicle formation timing in 12 B. subtilis isolates and found that one, MB9_B4, was significantly delayed in pellicle formation by approximately 10 h. MB9_B4 was previously noted to lack robust surfactin production. Indeed, deletion of surfactin synthesis in the other isolates delayed pellicle formation. Further, pellicle delay was rescued by addition of exogeneous surfactin. Testing reporters of biofilm-related gene expression revealed that induction of pellicle formation was caused by a combination of increased gene expression of one of the biofilm components and promotion of growth.
表面素是许多枯草芽孢杆菌菌株产生的一种生物表面活性剂,具有多种功能,从降低表面张力到允许细菌群运动,作为信号分子,甚至具有抗菌活性。然而,表面素在生物膜形成过程中的影响一直存在争议,根据实验条件的不同,研究结果也不同。已知枯草芽孢杆菌在固体-空气、固体-介质和液体-空气界面形成生物膜,后者被称为膜生物膜。膜膜的形成是一个复杂的过程,需要协调运动到液-气界面,随后协同生产生物膜基质成分,以允许强大的膜膜生物膜的形成。这使得膜形成成为分析生物膜形成和调控因素的一个很有前途的模型系统。在这里,我们分析了表面素和其他代谢物对膜生物膜形成时间的影响。利用延时成像技术,研究人员分析了12株枯草芽孢杆菌的膜形成时间,发现其中一株MB9_B4的膜形成时间明显延迟了约10小时。此前研究发现MB9_B4缺乏强大的表面素生成能力。事实上,在其他分离株中,表面素合成的缺失延迟了膜的形成。此外,外源表面素的加入挽救了膜延迟。对生物膜相关基因表达的测试报告显示,诱导膜形成是由一种生物膜成分的基因表达增加和促进生长的结合引起的。
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引用次数: 0
Decoding the impact of interspecies interactions on biofilm matrix components 解码物种间相互作用对生物膜基质成分的影响
IF 5.9 Q1 MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-03-14 DOI: 10.1016/j.bioflm.2025.100271
Cristina I. Amador , Henriette L. Røder , Jakob Herschend , Thomas R. Neu , Mette Burmølle
Multispecies biofilms are complex communities where extracellular polymeric substances (EPS) shape structure, adaptability, and functionality. However, characterizing the components of EPS, particularly glycans and proteins, remains a challenge due to the diverse bacterial species present and their interactions within the matrix. This study examined how interactions between different species affect EPS component composition and spatial organization. We analyzed a consortium of four bacterial soil isolates that have previously demonstrated various intrinsic properties in biofilm communities: Microbacterium oxydans, Paenibacillus amylolyticus, Stenotrophomonas rhizophila, and Xanthomonas retroflexus. We used fluorescence lectin binding analysis to identify specific glycan components and meta-proteomics to characterize matrix proteins in mono- and multispecies biofilms. Our results revealed diverse glycan structures and composition, including fucose and different amino sugar-containing polymers, with substantial differences between monospecies and multispecies biofilms. In isolation, M. oxydans produced galactose/N-Acetylgalactosamine network-like structures and influenced the matrix composition in multispecies biofilms. Proteomic analysis revealed presence of flagellin proteins in X. retroflexus and P. amylolyticus, particularly in multispecies biofilms. Additionally, surface-layer proteins and a unique peroxidase were identified in P. amylolyticus multispecies biofilms, indicating enhanced oxidative stress resistance and structural stability under these conditions. This study highlights the crucial role of interspecies interactions in shaping the biofilm matrix, as well as the production of glycans and proteins, thereby enhancing our understanding of biofilm complexity.
多物种生物膜是细胞外聚合物质(EPS)形成结构、适应性和功能的复杂群落。然而,表征EPS的成分,特别是聚糖和蛋白质,仍然是一个挑战,因为存在不同的细菌种类和它们在基质内的相互作用。本研究考察了不同物种间相互作用对EPS成分组成和空间组织的影响。我们分析了四种细菌土壤分离物的联盟,这些细菌以前在生物膜群落中表现出各种内在特性:氧化微杆菌、解淀粉芽孢杆菌、嗜根寡养单胞菌和逆转录黄单胞菌。我们使用荧光凝集素结合分析来鉴定特定的聚糖组分,并使用元蛋白质组学来表征单物种和多物种生物膜中的基质蛋白。我们的研究结果揭示了不同的聚糖结构和组成,包括焦点和不同的氨基糖含聚合物,在单物种和多物种生物膜之间存在实质性差异。在分离条件下,M. oxydans产生半乳糖/ n -乙酰半乳糖胺网状结构,并影响多物种生物膜的基质组成。蛋白质组学分析显示,在逆行X.和解淀粉X.中存在鞭毛蛋白,特别是在多物种生物膜中。此外,在P. amylolyticus多物种生物膜中发现了表面层蛋白和独特的过氧化物酶,表明在这些条件下,P. amylolyticus生物膜的抗氧化性和结构稳定性增强。这项研究强调了物种间相互作用在形成生物膜基质中的关键作用,以及聚糖和蛋白质的产生,从而增强了我们对生物膜复杂性的理解。
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引用次数: 0
Co-culture biofilm patterns among different Pseudomonas aeruginosa clones from cystic fibrosis patients 囊性纤维化患者不同铜绿假单胞菌克隆共培养生物膜模式
IF 5.9 Q1 MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-01-25 DOI: 10.1016/j.bioflm.2025.100257
Irene Cadenas-Jiménez , Morten Levin Rybtke , Doaa Higazy , Sara Martí-Martí , Tim Tolker-Nielsen , Oana Ciofu , Niels Høiby

Background

Pseudomonas aeruginosa chronic lung infection is the leading cause of death in the cystic fibrosis (CF) population. The high genome versatility of this microorganism allows it to adapt to the hostile CF lung where the same clone can persist for decades. Paranasal sinuses serve as a reservoir for bacterial adaptation before lung infection. Our study investigates biofilm compatibility among identical and different P. aeruginosa genotypes from sinus and lungs of CF patients. Strains were further characterized by whole genome sequencing and motility assays were performed.

Methodology

Motility, gentamicin susceptibility and growth rates were assessed in four strains coming from three CF patients. The strains were subjected to whole genome sequencing with the Illumina MiSeq platform.
Conjugation assays using the mini Tn7 transposon were performed in order to tag bacteria with the fluorescent proteins YFP (yellow) and CFP (cyan). Biofilm experiments were carried out in a flow cell system and images were acquired using a confocal laser microscope (CLSM) on days 3 and 5. Four experiments were performed: Experiment 1 with two clonal isolates from sinus and lungs from patient P01 (CF430-142, CF430-11621); experiments 2 (CF430-11621 + 75885-B) and 3 (CF430-11621 + 80271-B) with two lung isolates belonging to two different clones from different patients (P02, P03) and experiment 4 with one lung strain (CF430-11621) and P. aeruginosa PAO1 reference strain.

Results

P. aeruginosa clonal isolates coming from paranasal sinuses and lungs from the same patient were able to form mixed biofilm. When different clones were employed no mixed biofilms were observed. Similar results were observed when combining the lung strain and the reference strain PAO1. Biofilms of both strains were observed in the flow-cell channels but no mixed biofilms of them were observed, with the exception of strain 75887-B which did not appear to form any biofilm when mixed with strain CF430-11621. All strains performed swarming while strains CF430-142 and 75887B lacked twitching motility. An aminoacidic change in SadB was observed in the strain 75887B.

Conclusion

Mixed biofilms were only observed when identical clones from the same patient were cultured together. Our experiments indicate that twitching motility does not significantly affect biofilm formation or architecture in our isolates.
背景:铜绿假单胞菌慢性肺部感染是囊性纤维化(CF)人群死亡的主要原因。这种微生物的高基因组多功能性使其能够适应敌对的CF肺,其中相同的克隆可以持续数十年。在肺部感染之前,鼻窦是细菌适应的储存库。本研究探讨了CF患者鼻窦和肺中相同和不同铜绿假单胞菌基因型的生物膜相容性。菌株进一步通过全基因组测序和运动性测定进行鉴定。方法对来自3例CF患者的4株菌株进行活力、庆大霉素敏感性和生长速率评估。利用Illumina MiSeq平台对菌株进行全基因组测序。使用mini Tn7转座子进行偶联实验,以便用荧光蛋白YFP(黄色)和CFP(青色)标记细菌。在流式细胞系统中进行生物膜实验,并在第3天和第5天使用共聚焦激光显微镜(CLSM)获取图像。实验1从患者P01 (CF430-142, CF430-11621)的鼻窦和肺中分离出2株克隆菌株;实验2 (CF430-11621 + 75885-B)和实验3 (CF430-11621 + 80271-B)分别分离了来自不同患者(P02、P03)的两个不同克隆的两株肺分离株,实验4分离了一株肺分离株(CF430-11621)和铜绿假单胞菌PAO1参考株。来自同一患者鼻窦和肺部的铜绿假单胞菌克隆分离株能够形成混合生物膜。使用不同的克隆时,未观察到混合的生物膜。将肺菌株与参考菌株PAO1联合使用时,观察到相似的结果。除菌株75887-B与菌株CF430-11621混合后未形成生物膜外,两种菌株在流细胞通道中均观察到生物膜,但未观察到混合生物膜。菌株CF430-142和75887B没有抽搐运动。在菌株75887B中观察到SadB的氨基酸变化。结论只有同一患者的相同克隆在一起培养时才会出现混合生物膜。我们的实验表明,抽搐运动不会显著影响我们分离物的生物膜形成或结构。
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引用次数: 0
Cellulophaga algicola alginate lyase and Pseudomonas aeruginosa Psl glycoside hydrolase inhibit biofilm formation by Pseudomonas aeruginosa CF2843 on three-dimensional aggregates of lung epithelial cells 海藻酸解酶和铜绿假单胞菌Psl糖苷水解酶抑制铜绿假单胞菌CF2843在肺上皮细胞三维聚集体上形成生物膜
IF 5.9 Q1 MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-02-22 DOI: 10.1016/j.bioflm.2025.100265
Neetu , Shilpee Pal , Srikrishna Subramanian , T.N.C. Ramya
Pseudomonas aeruginosa is an opportunistic pathogen that produces a biofilm containing the polysaccharides, alginate, Psl, and Pel, and causes chronic lung infection in cystic fibrosis patients. Others and we have previously explored the use of alginate lyases in inhibiting P. aeruginosa biofilm formation on plastic and lung epithelial cell monolayers. We now employ a more physiologically representative model system, i.e., three-dimensional aggregates of A549 lung epithelial cells cultured under conditions of microgravity in a rotary cell culture system to mimic the natural lung environment, and a previously isolated clinical strain, Pseudomonas aeruginosa CF2843 that we engineered by transposon-mediated integration to express Green Fluorescent Protein and for which we also report the complete genome sequence. Immunostaining and lectin binding studies indicated that the three-dimensional cell aggregates harbored sialylated and fucosylated epitopes as well as Muc1, Muc5Ac, and β-catenin on their surfaces, suggestive of mucin secretion and the presence of tight junctions, hallmark features of lung epithelial tissue. Using this validated model system with confocal microscopy and viable bacterial counts as readouts, we demonstrated that Cellulophaga algicola alginate lyase and Pseudomonas aeruginosa Psl glycoside hydrolase, but not Pseudomonas aeruginosa Pel glycoside hydrolase, inhibit biofilm formation by Pseudomonas aeruginosa on three-dimensional lung epithelial cell aggregates.
铜绿假单胞菌是一种条件致病菌,可产生含有多糖、海藻酸盐、Psl和Pel的生物膜,可引起囊性纤维化患者的慢性肺部感染。其他人和我们之前已经探索了海藻酸盐裂解酶在抑制塑料和肺上皮细胞单层上铜绿假单胞菌生物膜形成中的应用。我们现在采用了一种更具生理学代表性的模型系统,即在微重力条件下在旋转细胞培养系统中培养的A549肺上皮细胞的三维聚集体来模拟自然肺环境,以及先前分离的临床菌株,铜绿假单胞菌CF2843,我们通过转座子介导的整合来表达绿色荧光蛋白,我们也报告了其完整的基因组序列。免疫染色和凝集素结合研究表明,三维细胞聚集体在其表面含有唾液化和聚焦的表位以及Muc1、Muc5Ac和β-catenin,提示粘蛋白分泌和紧密连接的存在,这是肺上皮组织的标志特征。利用共聚焦显微镜和活菌计数的验证模型系统,我们证明了海藻酸纤维素分解酶和铜绿假单胞菌Psl糖苷水解酶,而不是铜绿假单胞菌Pel糖苷水解酶,可以抑制铜绿假单胞菌在三维肺上皮细胞聚集体上形成生物膜。
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引用次数: 0
Drosera rotundifolia L. as E. coli biofilm inhibitor: Insights into the mechanism of action using proteomics/metabolomics and toxicity studies rotundifolia L.作为大肠杆菌生物膜抑制剂:利用蛋白质组学/代谢组学和毒性研究了解其作用机制
IF 5.9 Q1 MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-02-28 DOI: 10.1016/j.bioflm.2025.100268
Sandy Gerschler , Sandra Maaß , Philip Gerth , Lukas Schulig , Toni Wildgrube , Jan Rockstroh , Martina Wurster , Karen Methling , Dörte Becher , Michael Lalk , Christian Schulze , Sebastian Guenther , Nadin Schultze
The successful sustainable cultivation of the well-known medicinal plant sundew on rewetted peatlands not only leads to the preservation of natural populations, but also provides a basis for the sustainable pharmaceutical use of the plant. The bioactive compounds of sundew, flavonoids and naphthoquinones, show biofilm-inhibiting properties against multidrug-resistant, ESBL-producing E. coli strains and open up new therapeutic possibilities.
This study investigates the molecular mechanisms of these compounds in biofilm inhibition through proteomic analyses. Specific fractions of flavonoids and naphthoquinones, as well as individual substances like 7-methyljuglone and 2″-O-galloylhyperoside, are analyzed. Results show that naphthoquinones appear to act via central regulatory proteins such as OmpR and alter the stress response while flavonoids likely affect biofilm formation by creating an iron-poor environment through iron complexation and additionally influence polyamine balance, reducing intracellular spermidine levels. Further investigations including assays for iron complexation and analysis of polyamines confirmed the proteomic data. Safety evaluations through cytotoxicity tests in 3D cell cultures and the Galleria mellonella in vivo model confirm the safety of the extracts used. These findings highlight sundew as a promising candidate for new phytopharmaceuticals.
在复湿泥炭地成功地可持续栽培著名药用植物紫菜,不仅保护了自然种群,而且为该植物的可持续药用利用提供了基础。芥菜类黄酮和萘醌类生物活性化合物对多重耐药的产esbl大肠杆菌菌株显示出生物膜抑制特性,开辟了新的治疗可能性。本研究通过蛋白质组学分析探讨了这些化合物在生物膜抑制中的分子机制。分析了黄酮类化合物和萘醌的特定组分,以及7-甲基核桃苷和2″- o -没食子酰基金丝桃苷等个别物质。结果表明,萘醌似乎通过OmpR等中心调节蛋白起作用并改变应激反应,而黄酮类化合物可能通过铁络合产生缺铁环境来影响生物膜的形成,另外还影响多胺平衡,降低细胞内亚精胺水平。进一步的研究包括铁络合和多胺分析证实了蛋白质组学数据。通过在3D细胞培养物和mellonella体内模型中进行细胞毒性测试进行的安全性评估证实了所使用提取物的安全性。这些发现突出表明,芥菜是一种有前途的新型植物药物。
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引用次数: 0
Efficacy of nitric oxide donors and EDTA against Pseudomonas aeruginosa biofilms: Implications for antimicrobial therapy in chronic wounds 一氧化氮供体和EDTA对铜绿假单胞菌生物膜的作用:对慢性伤口抗菌治疗的意义
IF 5.9 Q1 MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-15 DOI: 10.1016/j.bioflm.2025.100280
Aaron Crowther , Gareth LuTheryn , Ramón Garcia-Maset , Maryam Parhizkar , J. Mark Sutton , Charlotte Hind , Dario Carugo
Opportunistic pathogen Pseudomonas aeruginosa plays a crucial role in chronic wound biofilms, increasing infection's morbidity and mortality. In recent years, the signalling molecule nitric oxide (NO) and chelating agent tetrasodium EDTA (T-EDTA) have been applied therapeutically owing to their multifactorial effects including bacterial killing, biofilm dispersal, and wound healing. However, previous studies assessing NO's antibiofilm efficacy have not considered the variable pH and temperature of the wound environment. Here, pH-dependent NO donors N-diazeniumdiolates (NONOates), PAPA NONOate (PA-NO) and Spermine NONOate (SP–NO), and T-EDTA were applied in wound-relevant pH environments (pH 5.5–8.5) and temperatures (32 °C and 37 °C) to P. aeruginosa PAO1 biofilms grown for either 24 or 48 h. At 32 °C and pH 7.5, 250 μM PA-NO reduced 24-h biofilm biomass by 35 %. At 37 °C, 250 μM PA-NO and 4 % w/v T-EDTA caused 21 % and 57 % biomass reduction in 24-h biofilms, respectively. In 48-h biofilms, NONOates did not induce significant biomass reduction, while T-EDTA maintained its efficacy with a 64 % reduction. A subsequent experiment investigated the impact of NONOates and T-EDTA as pre-treatments before exposure to ciprofloxacin. Unexpectedly, NONOate pre-treatment decreased ciprofloxacin's effectiveness, resulting in approximately 1-log increase in viable planktonic and biofilm-residing cells compared to ciprofloxacin alone. It was hypothesized that this protective effect might stem from NO-induced decreased cellular respiration, which inhibits reactive oxygen species (ROS)-mediated bactericidal mechanisms. These findings highlight both the potential and complexities of developing effective antimicrobial strategies for chronic wound infections, emphasizing the need for further research to optimize treatment approaches.
机会致病菌铜绿假单胞菌在慢性伤口生物膜中起着至关重要的作用,增加了感染的发病率和死亡率。近年来,信号分子一氧化氮(NO)和螯合剂四钠EDTA (T-EDTA)由于其多因素作用,包括细菌杀灭、生物膜分散和伤口愈合,已被应用于治疗。然而,以往评估NO抗生素膜功效的研究没有考虑到伤口环境的pH和温度的变化。在这里,pH依赖性NO供体n -重氮双酸酯(NONOates), PAPA NONOate (PA-NO)和精胺NONOate (SP-NO)以及T-EDTA在伤口相关的pH环境(pH 5.5-8.5)和温度(32°C和37°C)下对铜绿假单胞菌PAO1生物膜生长24或48小时。在32°C和pH 7.5下,250 μM PA-NO使24小时的生物膜生物量减少35%。在37°C时,250 μM PA-NO和4% w/v T-EDTA分别使24 h生物膜的生物量减少21%和57%。在48 h的生物膜中,NONOates没有引起显著的生物量减少,而T-EDTA保持其效果,减少了64%。随后的实验研究了NONOates和T-EDTA作为暴露于环丙沙星前的预处理的影响。出乎意料的是,NONOate预处理降低了环丙沙星的有效性,与单独环丙沙星相比,导致浮游生物和生物膜存活细胞增加了大约1倍。据推测,这种保护作用可能源于no诱导的细胞呼吸减少,从而抑制活性氧(ROS)介导的杀菌机制。这些发现强调了开发有效的抗微生物策略治疗慢性伤口感染的潜力和复杂性,强调需要进一步研究以优化治疗方法。
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引用次数: 0
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