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Holothurian assemblages before the harvest-boom era in inner reefs of Ishigaki Island, focusing on population dynamics of lollyfish Holothuria atra Jäger, 1833 石垣岛内礁收获繁荣时代之前的Holothurian群落,关注棒棒龙虾的种群动态Holothuria atra Jäger,1833年
IF 0.6 4区 生物学 Q3 Environmental Science Pub Date : 2021-08-06 DOI: 10.3800/pbr.16.165
S. Nishihama, I. Tanita
Distribution and abundance of holothurians before the boom of fisheries in the 1990s were analyzed in relation to types of bottom sediment and biomes in inner reefs of Ishigaki Island, Okinawa, Japan. The data had been collected continuously over three years at Yoshihara and once at three other sites. Fifteen species were found, among which the dominant Holothuria atra and Stichopus chloronotus were abundant on bottoms with sand and seagrass, and those with sand and coral cobbles, respectively. The continuous survey at Yoshihara revealed that the overall density of H. atra was 2 to 3 ind. m−2, which was the highest among values reported previously, and spatial-temporal distribution of H. atra was almost stable throughout the research period, but the distribution of St. chloronotus fluctuated irregularly. The density of H. atra fluctuated seasonally (high in winter and low in summer) and was correlated negatively with air temperature and irradiation, and positively with cloud cover. The body length of H. atra became longer in summer and shorter in winter. The frequency of asexual reproduction (fission) was estimated at less than 1% of annual recruitment, and the growth rate was estimated to be low (K=0.0845 in von Bertalanffy equation). The high density and slow growth suggested that the H. atra population had reached carrying capacity at Yoshihara. The sandcoated ratio of H. atra was positively correlated with wind speed, however, no trend was found with the spatial-temporal variation in the density and distribution of the sand-coated individuals.
分析了20世纪90年代渔业繁荣之前,日本冲绳石垣岛内礁的全苏云虫的分布和丰度与海底沉积物类型和生物群落的关系。这些数据是在吉原连续三年收集的,在其他三个地点收集了一次。发现了15个物种,其中占主导地位的Holothuria atra和Stichopus chloronotus分别分布在有沙子和海草的底部,以及有沙子和珊瑚鹅卵石的底部。在Yoshihara的连续调查显示,A.atra的总体密度为2至3 ind.m−2,这是之前报道的值中最高的,并且A.atra在整个研究期间的时空分布几乎稳定,但St.chloronotus的分布波动不规则。阿特拉的密度呈季节性波动(冬高夏低),与气温和辐射呈负相关,与云量呈正相关。阿特拉的体长在夏季变长,在冬季变短。无性繁殖(裂变)的频率估计不到每年招募的1%,生长率估计很低(在von Bertalanffy方程中K=0.0845)。高密度和缓慢的生长表明,在吉原,苏门答腊种群已经达到了承载能力。白鳍豚的沙被率与风速呈正相关,但沙被个体的密度和分布没有随时空变化的趋势。
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引用次数: 2
Impact of seasonal hypoxia on benthic copepod communities in Omura Bay, a highly enclosed coastal sea in southwestern Japan 季节性缺氧对日本西南部高度封闭沿海大村湾底栖桡足动物群落的影响
IF 0.6 4区 生物学 Q3 Environmental Science Pub Date : 2021-05-27 DOI: 10.3800/PBR.16.93
Kazuki Kawano, M. Shimanaga, R. Ueda, Quyen T. D. Nguyen, M. Wada
: Declining oxygen concentrations in aquatic habitats represent extreme conditions that threaten benthic life. Hypoxia has recently become an important research topic, as areas affected by these phenomena are spreading glob -ally. Omura Bay is one of the most highly enclosed seas in Japan, and severely hypoxic conditions occur at the bottom every summer. We conducted a preliminary study in the center of the bay to evaluate how seasonal hypoxia affects the abundance and community composition of benthic meiofauna, with particular reference to copepods. The copepod densities and their nauplii differed significantly among seasonal categories (before, during, and after hypoxia). Further more, the degree of the seasonal decline in copepods during hypoxia seemed much more severe than that in nematodes, the most abundant meiofauna. The assemblages of adult copepods had the simplest composition during hypoxia, when harpacticoid copepods in the family Cletodidae, which have smaller and slender bodies, occurred at significantly higher frequencies (a contribution of 84% to the mean similarity among seasons). After hypoxia, the relative abundance of copepods in the families Ectinosomatidae and Longipediidae increased, which may likely be attributed to their higher swimming abilities and rapid recruitment via specific planktonic nauplius stages, respectively. High frequencies of co pepods in the Cletodidae family have also been observed under hypoxic conditions in the Mediterranean Sea, suggest ing that similar processes affect benthic copepod communities, which work to the advantage of cletodid species with small and slender forms in the subtidal sediment bottom under severe hypoxia in Omura Bay and other regions.
:水生生境中氧气浓度的下降代表着威胁底栖生物的极端条件。缺氧最近成为一个重要的研究课题,因为受这些现象影响的地区正在全球蔓延。大村湾是日本封闭程度最高的海域之一,每年夏天海底都会出现严重缺氧的情况。我们在海湾中心进行了一项初步研究,以评估季节性缺氧如何影响底栖小型动物的丰度和群落组成,特别是桡足类。桡足类的密度及其无节幼体在季节类别之间(缺氧前、缺氧期间和缺氧后)存在显著差异。此外,桡足类在缺氧期间的季节性衰退程度似乎比线虫(最丰富的小型动物)严重得多。成年桡足类的组合在缺氧期间具有最简单的组成,而Cletodae科中体型较小、细长的叉状桡足类出现的频率明显更高(对季节间平均相似性的贡献为84%)。缺氧后,Ectinosomatidae和Longipedidae科桡足类的相对丰度增加,这可能分别归因于它们更高的游泳能力和通过特定浮游无节幼体阶段的快速补充。在地中海的缺氧条件下,也观察到了科桡足类的高频率,这表明类似的过程影响了底栖桡足类群落,这对大村湾和其他地区在严重缺氧的潮下沉积物底部具有细长形态的桡足类物种有利。
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引用次数: 1
Planktonic larvae of the rare spoon worm, Ikedosoma elegans (Annelida: Thalassematidae), collected from Tanabe Bay, Wakayama, Japan 罕见的匙形线虫Ikedosoma elegans的浮游生物幼虫(环节动物纲:Thalassematidae),采集于日本和歌山田边湾
IF 0.6 4区 生物学 Q3 Environmental Science Pub Date : 2021-05-27 DOI: 10.3800/PBR.16.149
K. Koizumi, T. Nakano, A. Asakura
Human activities, such as coastline development, water pollution, and the introduction of invasive species, threaten mudflat macrofauna. Many spoon worm species are endangered, possibly because of anthropogenic disturbance of mudflat environments. Understanding worm ecology is necessary for conservation. However, information regarding these species is limited, presumably because of difficulties in sample collection. In Tanabe Bay, Wakayama Prefecture, Japan, we attempted to collect and identify planktonic larvae instead of adults, using DNA barcoding to determine rare species. A larva of the rare spoon worm, Ikedosoma elegans, endemic to Japan, was collected. Thus, the existence of an unknown population of I. elegans likely exists. Furthermore, the use of larval monitoring for detecting rare marine invertebrates is demonstrated.
人类活动,如海岸线开发、水污染和入侵物种的引入,威胁着滩涂大型动物群。许多匙形虫物种濒临灭绝,可能是由于泥滩环境的人为干扰。了解蠕虫生态学对于保护是必要的。然而,关于这些物种的信息是有限的,可能是因为样本收集困难。在日本和歌山县田边湾,我们试图收集并鉴定浮游幼虫而不是成虫,使用DNA条形码来确定稀有物种。采集了日本特有的罕见匙形线虫Ikedosoma elegans的幼虫。因此,可能存在一个未知的秀丽隐杆线虫种群。此外,还证明了利用幼虫监测来检测稀有海洋无脊椎动物。
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引用次数: 0
Morphological and molecular analyses of Blackfordia sp. (Hydrozoa: Leptothecata) newly discovered in Vietnam 越南新发现的黑狐属(水螅虫:细肢纲)的形态和分子分析
IF 0.6 4区 生物学 Q3 Environmental Science Pub Date : 2021-05-27 DOI: 10.3800/PBR.16.118
A. Iida, D. Lindsay, T. M. Ha, Mitsuko Hidaka, S. Toshino, Y. Kondo, S. Ohtsuka, J. Nishikawa
Hydrozoan jellyfish of the genus Blackfordia currently consist of three described species: B. manhattensis, B. virginica and B. polytentaculata. These species are distinguished by combinations of the position and shape of the gonads, the number of marginal tentacles, and the presence or absence of black pigments on the bell rim. We discovered a species of the genus Blackfordia in Vietnam for the first time. Morphological and molecular analyses revealed that this Vietnamese Blackfordia had an intermediate number of tentacles compared with its congeners, and a similar number of tentacles had been reported in Blackfordia only in Brazil, Mexico and India. Mitochondrial DNA analysis indicated that Vietnamese Blackfordia formed a sub-clade with “B. virginica” from Brazil, and differed from B. virginica from other locations, having a K2P distance of >0.13. These results suggest that Blackfordia sp. found in Vietnam (and Brazil) may be a different species from B. virginica found elsewhere, though more information is needed to establish this new species.
布莱克福德水母属的水螅水母目前由三个描述的物种组成:曼哈滕水母、弗吉尼亚水母和多齿水母。这些物种的区别在于性腺的位置和形状、边缘触须的数量以及钟形边缘是否存在黑色色素。我们第一次在越南发现了一种黑藤属植物。形态学和分子分析表明,与同类动物相比,这种越南黑福藻的触手数量适中,只有巴西、墨西哥和印度的黑福藻也有类似数量的触手。线粒体DNA分析表明,越南黑福氏菌与来自巴西的“B.virginica”形成亚支,并与来自其他地方的B.virginia不同,K2P距离>0.13。这些结果表明,在越南(和巴西)发现的Blackfordia sp.可能与在其他地方发现的B.virginica不同,尽管还需要更多的信息来确定这个新物种。
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引用次数: 2
First record of Kamaka corophina Ren & Sha, 2013 (Crustacea: Amphipoda: Kamakidae) in Japan 日本Kamaka corophina Ren & Sha首次记录,2013(甲壳纲:片足纲:镰足科)
IF 0.6 4区 生物学 Q3 Environmental Science Pub Date : 2021-05-27 DOI: 10.3800/PBR.16.84
H. Ariyama
: Kamaka corophina Ren & Sha, 2013 (Crustacea: Amphipoda: Kamakidae) individuals were collected from the Ryukyu Archipelago in Southwest Japan. This is the first record of the amphipod in Japan and the fifth species of the genus in Japan. Kamaka corophina is characterized by a swollen peduncular article 4 of the male antenna 2 with a small process at the posterodistal corner, the male gnathopod 2 propodus with an oblique or transverse palm, and the bases of pereopods 5–7 each bearing 5–9 posterior plumose setae. Although the male gnathopod 2 in the original K. corophina from China has only an oblique palm, those in the Japanese specimens have two types of palm.
: Kamaka corophina Ren & Sha, 2013(甲壳纲:Amphipoda: Kamakidae)在日本西南部琉球群岛采集的个体。这是在日本首次发现的片足类动物,也是在日本发现的该属的第五种。Kamaka corophina的特征是雄性触角2的叶柄4肿胀,在后远端角处有一个小突起,雄性颚足目2的似足部有一个斜掌或横向掌,而每只纲5-7的基部有5-9个后羽状刚毛。中国原始冠棘雄颌足目2只有一个斜掌,而日本标本中的雄颌足目2有两种掌。
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引用次数: 0
Use of environmental DNA to survey the distribution of the invasive mussel Limnoperna fortunei in farm ponds 利用环境DNA调查入侵贻贝在养殖池塘中的分布
IF 0.6 4区 生物学 Q3 Environmental Science Pub Date : 2021-05-27 DOI: 10.3800/PBR.16.100
Kenji Ito, H. Shibaike
: The golden mussel Limnoperna fortunei (Dunker, 1857) is an invasive freshwater bivalve species that exerts harmful effects on the environment, as well as man-made structures, such as water-treatment systems. By using conventional sampling methods, it is difficult to detect mussels under low-density conditions; however, environmental DNA (eDNA) analysis may be a rapid and efficient method for monitoring this aquatic organism. In this study, we conducted surveys based on the eDNA analysis of L. fortunei in 15 farm ponds in Japan and compared the results with those of two conventional survey methods, visual census and plankton larval survey, to clarify the effectiveness of eDNA analysis for field surveys of L. fortunei . Primers and a probe specific to L. fortunei were developed, and a method for analysis was established. In the laboratory experiments, the species eDNA was detected in all water tanks containing the mussels, and the concentration of eDNA was high in the experimental tank that had high density of L. fortunei . In the field survey, L. fortunei eDNA was detected in all ponds where the mussels were found by conventional survey, and low concentrations of eDNA were also detected in several ponds where no L. fortunei were found by traditional methods. These results suggest that eDNA analysis has greater sensitivity for the detection of L. fortunei in farm ponds than that of conventional methods. Environmental DNA surveys have little impact on water management and are suitable for surveys at water facilities that have not yet been damaged by the mussels.
:金贻贝(Limnoperna fortunei, Dunker, 1857)是一种入侵的淡水双壳类物种,对环境和人为结构(如水处理系统)产生有害影响。在低密度条件下,传统的采样方法难以检测到贻贝;然而,环境DNA (eDNA)分析可能是一种快速有效的监测水生生物的方法。本研究在日本15个养殖池塘中开展了fortunei的eDNA调查,并与目测调查和浮游生物幼虫调查两种常规调查方法进行了比较,以阐明eDNA分析在fortunei野外调查中的有效性。开发了一种针对金缕草的引物和探针,并建立了分析方法。在实验室实验中,所有贻贝的水箱中均检测到物种eDNA,且在褐藻密度较高的实验水箱中,eDNA浓度较高。在野外调查中,在所有常规调查发现贻贝的池塘中都检测到fortunei eDNA,在一些传统方法未发现fortunei的池塘中也检测到低浓度的eDNA。这些结果表明,eDNA分析方法对农场池塘中fortunei的检测比传统方法具有更高的灵敏度。环境DNA调查对水资源管理影响不大,适合在尚未被贻贝破坏的水设施进行调查。
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引用次数: 5
Tiaricodon orientalis sp. nov., a new species (Hydrozoa, Anthoathecata, Halimedusidae) from Sagami Bay, eastern Japan 日本东部相模湾一新种(水螅动物,花纲,水母科)——东方Tiaricodon orientalis sp. nov
IF 0.6 4区 生物学 Q3 Environmental Science Pub Date : 2021-05-27 DOI: 10.3800/PBR.16.129
Gaku Yamamoto, S. Toshino
A new hydromedusa belonging to the order Anthoathecata is reported from Sagami Bay, eastern Japan. Tiaricodon orientalis sp. nov. can be distinguished from other Tiaricodon species by the umbrella size of the medusa, manubrium length, interradial peaks in the subumbrella, and a red band on the upper part of the manubrium. A comparative table of the primary diagnostic characters of the genus is provided. Our morphological and molecular phylogenetic analyses suggest that Tiaricodon from China is not Tiaricodon coeruleus but Tiaricodon orientalis.
在日本东部相模湾报道了一种新的水水母属花形目。从水母的伞状大小、柄长、伞下的辐间峰和柄上部的红色带等特征可以将东方冠状齿与其他冠状齿区分开来。提供了该属的主要诊断特征的比较表。形态学和分子系统发育分析表明,中国的冠状齿不是蓝纹冠状齿,而是东方冠状齿。
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引用次数: 1
Ingestion of microplastics by free-living marine nematodes, especially Enoplolaimus spp., in Mallipo Beach, South Korea 在韩国马利波海滩,自由生活的海洋线虫,特别是Enoplolaimus spp.摄入微塑料
IF 0.6 4区 生物学 Q3 Environmental Science Pub Date : 2021-05-27 DOI: 10.3800/PBR.16.109
Teawook Kang, Dongsung Kim, Je Hyeok Oh
: Many plastics cause pollution in the marine environment, with microplastics (0.1 µ m–5 mm) representing a key research focus. The number of microplastics in sediments may increase rapidly, affecting organisms inhabiting marine sediments. The aim of this study was to determine how microplastics affect nematodes in intertidal sand. We assessed: (1) intake of microplastic particles (10 µ m, 5 µ m, 1 µ m, or 0.5 µ m) by Enoplolaimus spp. over 48 h; (2) microplastic intake by nematodes depending on feeding type (selective deposit feeders, non-selective deposit feeders, epistrate feeders, or predators/omnivores) over 48 h; and (3) microplastic egestion by Enoplolaimus spp. The proportion of Enoplolaimus spp. individuals containing microplastics was significantly less in the 10- µ m microplastic treatment than in the treatments where Enoplolaimus spp. were exposed to microplastic particles of smaller sizes (5 µ m, 1 µ m, or 0.5 µ m). The ingestion rates of microplastics by predators/omnivores, non-selective deposit feeders, and selective deposit feeders increased as the size of the microplastic decreased. After transferring Enoplolaimus spp. to filtered seawater following microplastic ingestion, the proportion of Enoplolaimus spp. individuals containing the smallest size microplastic (0.5 µ m) decreased by 15% of the ingested amount in 3 days. In conclusion, there was a significant differ ence among microplastic-size treatments, but not among feeding types or in the interaction between microplastic size and feeding type. The size of microplastics, rather than feeding type of nematodes, impacted ingestion rates. It is pos-sible that microplastics in the sediment are ingested by living in marine ecosystems.
许多塑料会对海洋环境造成污染,其中微塑料(0.1µm-5 mm)是研究的重点。沉积物中的微塑料数量可能迅速增加,影响海洋沉积物中的生物。这项研究的目的是确定微塑料如何影响潮间带沙中的线虫。我们评估了:(1)enplolaimus spp.在48小时内摄入微塑料颗粒(10 μ m, 5 μ m, 1 μ m或0.5 μ m);(2)线虫在48小时内的微塑料摄取量取决于摄食类型(选择性沉积物摄取者、非选择性沉积物摄取者、附着性摄取者或捕食者/杂食者);(3) Enoplolaimus spp的微塑料摄取量。在10µm的微塑料处理下,Enoplolaimus spp个体中含有微塑料的比例显著低于5µm、1µm和0.5µm的微塑料处理。随着微塑料尺寸的减小,捕食者/杂食性动物、非选择性沉积物摄取者和选择性沉积物摄取者对微塑料的摄取量增加。摄食微塑料后将Enoplolaimus sp .转移到过滤后的海水中,3天内含有最小尺寸微塑料(0.5µm)的Enoplolaimus sp .个体比例下降了摄食量的15%。综上所述,不同微塑料粒径处理之间存在显著差异,但不同投喂方式之间及微塑料粒径与投喂方式之间的相互作用不存在显著差异。微塑料的大小,而不是线虫的摄食类型,影响摄食率。沉积物中的微塑料有可能是由海洋生态系统中的生物摄入的。
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引用次数: 5
Nectonemertes mirabilis (Nemertea: Hoplonemertea: Pelagica) from deep waters of the Gulf of Mexico, first sighting of a pelagic nemertean in the gulf 从墨西哥湾的深水中发现的神奇Nectonemertes (Nemertea: Hoplonemertea: Pelagica),首次在海湾中发现了远洋nemertes
IF 0.6 4区 生物学 Q3 Environmental Science Pub Date : 2021-05-27 DOI: 10.3800/PBR.16.139
M. VIOLANTE-HUERTA, L. Sanvicente-Añorve
: The deep-water bathypelagic nemertean Nectonemertes mirabilis , previously found in the Atlantic and Pacific oceans, was confirmed for the first time in the Gulf of Mexico. This new record is represented by a juvenile male collected by a stratified plankton sampling at 800–1,000 m depth in the southern gulf (20.5 °N, 94.5° W), during summer 2014. This is the first record of a pelagic nemertean in the gulf; extending our knowledge about the species ʼ global distribution, the number of nemertean species present in Mexican Atlantic waters, and the need to explore the mesopelagic zone of the oceans.
以前在大西洋和太平洋发现的深海水母“奇迹水母”首次在墨西哥湾得到证实。这一新记录由2014年夏季在南海湾(20.5°N, 94.5°W) 800-1,000 m深度分层浮游生物取样收集的一只幼雄鱼代表。这是在海湾发现的第一个远洋海鸟的记录;扩大了我们对物种全球分布的认识,墨西哥大西洋水域内墨墨特物种的数量,以及探索海洋中上层区域的必要性。
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引用次数: 0
Bioluminescence of the polychaete Tharyx sp. (Annelida: Cirratulidae) in deep-seawater from Toyama Bay, Japan 日本富山湾深海水中多毛纲动物的生物发光
IF 0.6 4区 生物学 Q3 Environmental Science Pub Date : 2021-05-27 DOI: 10.3800/PBR.16.145
Ikuhiko Kin, Naoto Jimi, Gaku Mizuno, Hidenobu Koike, Y. Oba
Commercially pumped deep-seawater is an easily accessible source of deep-sea animals. In this study, we report the bioluminescence of a cirratulid polychaete, Tharyx sp., obtained from pipeline seawater pumped up from a depth of 384 m in Toyama Bay. Two living worms collected from the nylon mesh attached to the pump outlet produced greenish light when disturbed. They were identified as Tharyx sp. (Cirratulidae) by morphological examination and DNA sequencing. Bioluminescence of cirratulid worms is not widely reported and, to our knowledge, this is the first report of bioluminescence in the genus Tharyx.
商业泵送的深海海水是一种容易获得的深海动物来源。在这项研究中,我们报道了一种卷层多毛类Tharyx sp.的生物发光,它是从富山湾384米深的管道海水中提取的。从连接在泵出口的尼龙网中收集的两只活蠕虫在受到干扰时会发出绿光。经形态学检查和DNA测序,鉴定为圆藻科(Cirratulidae)。卷层虫的生物发光尚未被广泛报道,据我们所知,这是首次报道卷层虫属的生物发光。
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引用次数: 1
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Plankton & Benthos Research
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