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Chytrid infection in Asia: How much do we know and what else do we need to know? 亚洲壶菌感染:我们知道多少?我们还需要知道什么?
IF 1 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2020-04-01 DOI: 10.33256/hj30.2.99111
Md. Mokhlesur Rahman, Mahatub Khan Badhon, M. Salauddin, Md. Fazle Rabbe, M. Islam
We conducted a systematic review to evaluate the knowledge base for amphibian chytrid Batrachochytrium dendrobatidis (Bd) infection in the continent of Asia. Despite an indication of geographic bias in terms of studying chytrid fungus distribution in Asia, 167 amphibian species (145 spp. native to Asia) from 16 countries have been reported as infected with Bd. Our meta-analysis shows that overall prevalence is 8.19 % (out of 28,433 samples), and Bd-positive rate in amphibia significantly varies among sampling sources (χ2= 380.57, DF= 6, P< 0.001) and age categories (χ2= 22.09, DF= 2, P< 0.001). We used Kernel Density analysis to produce a hotspot map for chytrid infection, and Digital Elevation Model to understand the distribution of chytrid positive locations across different elevations. In our meta-analysis, most of the Bd-positive sites range between 4.45–27.49 °C, 167–4,353 mm rainfall, 10–40°N, and at lower elevations (<500 m). Using land cover analysis, we did not find a statistically significant difference among six different land cover categories in relation to the prevalence of Bd across Asia. Although no mass die-off events have been reported so far, Maximum Entropy modelling shows that Bd distribution and infection may potentially occur across a vast region of south-east Asia. In conclusion, we call for more systematic research and monitoring strategies in place for countries with little to no information, but have a moderately higher risk of chytrid distribution and infection.
我们进行了一项系统综述,以评估亚洲大陆两栖动物壶菌Batrachochytrium dendrobatidis(Bd)感染的知识库。尽管在研究壶菌在亚洲的分布方面存在地理偏见,但据报道,来自16个国家的167种两栖动物(145种原产于亚洲)感染了Bd。我们的荟萃分析显示,总体患病率为8.19%(在28433个样本中),两栖动物的Bd阳性率在采样源(χ2=380.57,DF=6,P<0.001)和年龄类别(χ2=22.09,DF=2,P<0.001。在我们的荟萃分析中,大多数Bd阳性位点的温度范围在4.45–27.49°C、167–4353 mm降雨量、10–40°N之间,海拔较低(<500 m)。使用土地覆盖分析,我们没有发现六种不同的土地覆盖类别与亚洲Bd流行率之间存在统计学上的显著差异。尽管到目前为止还没有大规模死亡事件的报道,但最大熵模型显示,Bd的分布和感染可能发生在东南亚的广大地区。总之,我们呼吁对信息很少或根本没有信息,但乳糜泻分布和感染风险略高的国家进行更系统的研究和监测。
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引用次数: 12
Aliens in the backyard: Did the American bullfrog conquer the habitat of native frogs in the semi-deciduous Atlantic Forest? 后院的外星人:美洲牛蛙是否征服了大西洋半落叶森林中本土青蛙的栖息地?
IF 1 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2020-04-01 DOI: 10.33256/hj30.2.9398
L. Ferrante, F. Baccaro, I. L. Kaefer
The American bullfrog Lithobates catesbeianus has a natural distribution in North America, but was spread by human activities in different regions around the world. It is listed as the most invasive amphibian species, affecting terrestrial and aquatic ecosystems and the community of native species. In addition, the American bullfrog is extensively associated with lethal pathogens, with high correlation of the presence of this species with population declines and extinctions. Here we test if this alien species has spread through the landscape, establishing populations at new locations. We used diverse methods including georeferencing of satellite images, ethnobiological interviews and field data to evaluate the dispersion and effects of L. catesbeianus introduction on amphibian composition, species number, and density of individuals in forest fragments in an Atlantic Forest landscape. We did not find any relationship between density of individuals, number of species or composition of the native anuran assemblages in forest fragments in relation to the presence or proximity of American bullfrog introduction points. Additionally, we found that the dispersion potential of this species in the studied landscape is zero, as it was only found in those fragments where it was specifically introduced 15 years ago. The species has not established new populations in the landscape. Although exotic, L. catesbeianus thrives in lentic habitats and has no apparent effect on the structural metrics of the native anuran assemblage. Despite this alien species exhibiting a capacity to adapt and survive at the point of introduction, its potential for propagation is limited probably by the fragmented terrestrial landscape and regional stream network.
美洲牛蛙(Lithobates catesbeianus)在北美有自然分布,但由于人类活动在世界不同地区传播。它被列为最具入侵性的两栖动物物种,影响陆地和水生生态系统以及本地物种群落。此外,美洲牛蛙与致命病原体广泛相关,该物种的存在与种群数量下降和灭绝高度相关。在这里,我们测试这种外来物种是否已经在景观中传播,在新的地点建立种群。采用卫星影像地理参考、民族生物学访谈和野外数据等方法,对大西洋森林景观中森林破碎片中两栖动物的分布、物种数量和个体密度进行了评价。我们没有发现美洲牛蛙种群的个体密度、种类数量或组成与美洲牛蛙引种点的存在或邻近之间存在任何关系。此外,我们发现该物种在研究景观中的扩散潜力为零,因为它只在15年前专门引入的那些片段中被发现。该物种尚未在景观中建立新的种群。虽然是外来物种,但它在原生生境中生长旺盛,对原生无尾虫群落的结构指标没有明显影响。尽管这种外来物种在引进时表现出适应和生存的能力,但其传播的潜力可能受到陆地景观和区域河流网络的限制。
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引用次数: 3
People’s perceptions of crocodiles in Nigeria 尼日利亚人对鳄鱼的看法
IF 1 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2020-04-01 DOI: 10.33256/hj30.2.112116
E. Eniang, G. Akani, D. Dendi, J. Fa, L. Luiselli
Throughout Africa, feelings towards crocodiles vary according to the danger or fear experienced by communities living alongside them. Crocodile conservation programmes must therefore be based on reliable assessments of cultural attitudes towards these reptiles. In this study, we interviewed a random sample of 300 persons in six states in southern Nigeria to determine their perception of crocodiles. Our results revealed that most respondents were very familiar with crocodiles, with animals being regularly sighted but only in small numbers. Most interviewees were aware of just two crocodile types, consistently describing the dwarf crocodile (Osteolaemus tetraspis) and the West African Nile crocodile (Crocodylus [niloticus] suchus); only a minority of respondents reporting they were aware of the West African slender-snouted crocodile (Mecistops cataphractus).
在整个非洲,人们对鳄鱼的感受因生活在鳄鱼身边的社区所经历的危险或恐惧而不同。因此,鳄鱼保护计划必须建立在对这些爬行动物的文化态度进行可靠评估的基础上。在这项研究中,我们随机采访了尼日利亚南部六个州的300人,以确定他们对鳄鱼的看法。我们的研究结果显示,大多数受访者对鳄鱼非常熟悉,人们经常看到鳄鱼,但数量很少。大多数受访者只知道两种鳄鱼类型,一致描述了侏儒鳄(Osteolaemus tetraspis)和西非尼罗河鳄(Crocodylus[niloticus]suchus);只有少数受访者表示他们知道西非细吻鳄(Mecistops cataphractus)。
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引用次数: 5
Discovering the biogeographic history using predefined areas and explicit geographical data in the South American Liolaemus elongatus group (Iguania: Liolaemidae) 利用预先确定的区域和明确的地理数据在南美洲龙舌蜥群中发现生物地理学历史(鬣蜥:龙舌蜥科)
IF 1 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2020-04-01 DOI: 10.33256/hj30.2.5368
M. S. Ruiz, S. Portelli, T. Hibbard, A. S. Quinteros
The genus Liolaemus includes 268 species, classified in two subgenera, Eulaemus and Liolaemus sensu stricto. The latter is formed by 12 monophyletic groups; one of them being the Liolaemus elongatus group, distributed in South America. We studied the biogeographic history of the L. elongatus group. We obtained a phylogenetic hypothesis recovering five main clades: the L. punmahuida, L. elongatus sensu stricto, L. kriegi, L. petrophilus and L. capillitas clades. Based on that hypothesis we obtained a time calibrated tree. The ancestral ranges were estimated applying three methodologies: DEC, DEC+j (using predefined areas) and GEM (using explicit geographical data). Our results show that the ancestral area of the L. elongatus group was located in central Argentina, and its divergence began around 11.5 Mya. From here, a combination of events (founder events and/or vicariances) led the species to their current distribution. Despite their differences, DEC+j and GEM show congruent results.
Liolaemus属包括268种,分为两个亚属,Eulaemus和Liolaemussensusstricto。后者由12个单系群组成;它们中的一种是分布在南美洲的长形Liolaemus群。我们研究了L.elongatus群的生物地理学历史。我们得到了一个系统发育假说,回收了五个主要的分支:L.punmahuida、L.elongatussenso-stricto、L.kriegi、L.petophilus和L.capillitas分支。基于这个假设,我们得到了一个时间校准树。祖先范围采用三种方法进行估计:DEC、DEC+j(使用预定义区域)和GEM(使用明确的地理数据)。我们的研究结果表明,L.elongatus群的祖先区位于阿根廷中部,其分化始于11.5Mya左右。从这里开始,一系列事件(创始人事件和/或代理事件)将该物种引向了目前的分布。尽管存在差异,DEC+j和GEM显示出一致的结果。
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引用次数: 2
Snakes and the Eternal City: variation in community metrics, body size and population density of snakes in contrasted landscapes of suburban Rome (Italy) 蛇与永恒之城:意大利罗马郊区对比景观中蛇的社区指标、体型和人口密度的变化
IF 1 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2020-04-01 DOI: 10.33256/hj30.2.6982
L. Rugiero, L. Luiselli, M. Capula, F. Petrozzi, M. Vittorio, N. Pacini, L. Vignoli, D. Dendi, G. Milana, G. Amori, R. Meek
Reports of global declines in animal populations are now numerous and also include snakes, a group of animals now widely regarded as bio indicators. A prerequisite for any conservation management plan to protect or restore snake populations requires a data base that provides insight into population composition and changes. However, snakes are well known to be particularly difficult to quantitatively sample due to their secretive and elusive nature, and hence accumulating an adequate database for analysis requires long-term field studies that involve intensive searches. Populations of four snake species, Zamensis longissimus, Natrix helvetica, Vipera aspis and Hierophis viridiflavus living in two suburban areas of Rome with different extents of habitat alteration (deforestation), Vejo, a less altered site, and Tor Bella Monaca, a high altered site, have been monitored, but with interruptions since 1995. The results indicated that H. viridiflavus was the commonest species at both sites. Male bias was found in all four species but especially in Z. longissimus and V. aspis with detection of juveniles greatest in H. viridiflavus and N. helvetica. Snout to vent lengths (SVL) of H. viridiflavus and Z. longissimus, which were present at both sites, were greater at the less degraded habitat of the two study localities. Community metrics indicated that the degraded habitat had lower species richness, evenness, Shannon and Simpson diversity indices, but a higher dominance index. Recapture frequencies of snakes recaptured either once or multiple times were in general greater at Vejo. The highest population densities were found in H. viridiflavus, followed by V. aspis and N. helvetica, which were similar. However, long term trends in densities show declines in V. aspis and N. helvetica between 1995 and 2019. Population densities were in good agreement with density estimates found in previous studies of snakes in more natural habitats.
关于全球动物数量下降的报告现在很多,其中也包括蛇,这是一种现在被广泛视为生物指标的动物。任何保护或恢复蛇种群的保护管理计划的先决条件都需要一个能够深入了解种群组成和变化的数据库。然而,众所周知,蛇由于其隐秘和难以捉摸的性质,特别难以定量采样,因此积累足够的数据库进行分析需要长期的实地研究,包括密集的搜索。已经监测了四种蛇的种群,即Zamensis longissimus、Natrix helvetica、Vipera aspis和Hierophis viridiflavus,它们生活在罗马的两个郊区,栖息地发生了不同程度的变化(森林砍伐),Vejo是一个变化较小的地点,Tor Bella Monaca是一个高度变化的地点,但自1995年以来一直处于中断状态。结果表明,在这两个地点,绿色二黄酮是最常见的物种。在所有四个物种中都发现了雄性偏好,尤其是在最长叶蝉和肉冻叶蝉中,在绿色叶蝉和helvetica中检测到的幼体最多。在这两个研究地点都存在的H.viridiflavus和Z.longissimus的鼻孔到通风口的长度(SVL)在两个研究地区退化程度较低的栖息地更大。群落指标表明,退化栖息地的物种丰富度、均匀度、Shannon和Simpson多样性指数较低,但优势度指数较高。在Vejo,一次或多次被捕获的蛇的捕获频率通常更高。种群密度最高的是绿色黄曲霉,其次是阿斯皮氏黄曲霉和赫尔维蒂卡黄曲霉,两者相似。然而,密度的长期趋势显示,1995年至2019年间,A.aspis和N.helvetica的密度有所下降。种群密度与之前对更自然栖息地的蛇的研究中发现的密度估计值非常一致。
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引用次数: 0
How does captivity affect skin colour reflectance of golden mantella frogs? 圈养是如何影响金曼特拉蛙的肤色反射率的?
IF 1 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2020-01-01 DOI: 10.33256/hj30.1.1319
L. Passos, G. Garcia, R. Young
Coloration is an important trait for social communication in amphibians, being used in intra- and intersexual signalling to express information about individual body condition and health state, amongst other things. The striking colour pattern exhibited by some anuran species are also used in “aposematic” signals to advertise unpalatability to predators. The aim ofthis study was to investigate how the captive environment affects the colour of golden mantella frogs by comparing captive reared frogs with wild conspecifics. A USB-2000 portable diode-array spectrometer and a xenon strobe light source were used to perform spectrophotometric measurements on captive and wild populations. Hue, chroma and brightness of skin colour were analysed as well as body condition using the scaled mass index. Analyses showed variation among populations, but significant differences were only found between captive and wild populations. Generalised linear mixed models were used to evaluate the effects of body condition on colour variation and showed that animals with lower body condition from one captive population had significantly different coloration than their wild counterparts. Importantly, one captivepopulation was not greatly different in coloration from their wild counterparts – demonstrating that this problem is not inevitable in captivity. These results can have important implications for reintroduction programmes.
颜色是两栖动物社会交流的一个重要特征,用于性内和性间信号传递,以表达有关个体身体状况和健康状态的信息等。一些无尾类物种表现出的引人注目的颜色模式也被用于向捕食者宣传不愉快的“信号”。本研究的目的是通过比较圈养青蛙和野生同种青蛙,研究圈养环境如何影响金曼特拉蛙的颜色。USB-2000便携式二极管阵列光谱仪和氙频闪灯光源用于对圈养和野生种群进行分光光度测量。使用标度质量指数分析肤色的色调、色度和亮度以及身体状况。分析显示,种群之间存在差异,但只有圈养种群和野生种群之间存在显著差异。使用广义线性混合模型来评估身体状况对颜色变化的影响,并表明一个圈养种群中身体状况较低的动物与野生动物的颜色明显不同。重要的是,一个圈养种群在颜色上与野生种群没有太大区别——这表明这个问题在圈养中并非不可避免。这些结果可能对重新引入计划产生重要影响。
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引用次数: 2
Photo-identification of horseshoe whip snakes (Hemorrhois hippocrepis, Linnaeus, 1758) by a semi-automatic procedure applied to wildlife management 应用于野生动物管理的半自动程序对马蹄鞭蛇(Hemohrhois hippocrepis,林奈,1758)进行照片识别
IF 1 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2019-10-01 DOI: 10.33256/29.4.304307
A. Rotger, V. Colomar, J. E. Moreno, Luís Parpal
Photo-identification is an increasingly used method for the study of animal populations. Natural marks such as coloration or scale pattern to identify individuals provide an inexpensive and less invasive alternative to conventional tagging methods. Photo-identification has previously been used to distinguish individual snakes, usually by comparing the pileus region. Nevertheless, this method is seldom used in capture-recapture studies. We show the effectiveness of photo-identification in snakes using specific software for individual recognition applied to a wildlife control study of horseshoe whip snakes. Photos were analysed with Automatic Photo Identification Suite (APHIS), which allowed us to compare the variability of head scale patterns surrounding the parietal shields instead of the traditional method of using large scale groups of the pileus. APHIS correctly identified 100 % of recaptures of snakes. Although further studies are needed, the variability of the surrounding scales of the pileus region seems a robust method to identify and differentiate individuals.
照片鉴定是研究动物种群的一种越来越多的方法。识别个体的自然标记,如着色或刻度模式,为传统的标记方法提供了一种廉价且侵入性较小的替代方法。照片识别以前被用来区分个体蛇,通常是通过比较菌盖区域。然而,这种方法很少用于捕获-再捕获研究。我们将用于个体识别的特定软件应用于马蹄鞭蛇的野生动物控制研究,展示了蛇的照片识别的有效性。使用自动照片识别套件(APHIS)对照片进行分析,该套件使我们能够比较顶叶护罩周围头部尺度模式的可变性,而不是传统的使用大规模菌盖组的方法。APHIS正确识别了100%的蛇捕获物。尽管还需要进一步的研究,但菌盖区域周围鳞片的变异性似乎是识别和区分个体的一种稳健方法。
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引用次数: 3
Movements and habitat choice of resident and translocated adult female Grass Snakes (Natrix natrix) during the egg-laying period 成年和迁居雌性草蛇产卵期的活动和栖息地选择
IF 1 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2019-10-01 DOI: 10.33256/29.4.245251
J. Elmberg
We used externally applied transmitters to study movements of female grass snakes (Natrix natrix) during the egg-laying period in a near-urban landscape in Sweden. Half of the studied snakes were residents while the other half were translocated individuals with no previous experience of the area. As predicted, resident females moved more goal-oriented and shorter distances than did translocated individuals. Habitat use did not differ between resident and translocated snakes; they were typically found in bushes, reeds, and tall vegetation. Habitat preference (use in relation to availability) showed that bushy habitats, tall grassy vegetation and reedbeds were over-used in proportion to availability, whereas forest and open grass lawns were used less than expected based on availability. Our study highlights the importance of preserving and restoring linear habitat components providing shelter and connectivity in conservation of grass snakes. We suggest that externally applied transmitters are a better option than surgically implanted ones in movement studies of grass snakes, and that translocation as a conservation method for snakes has drawbacks.
我们使用外部应用的发射器研究了雌性草蛇(Natrix Natrix)在瑞典近城市景观中产卵期间的运动。被研究的蛇中有一半是居民,而另一半是以前没有该地区经验的迁移个体。正如预测的那样,居住的雌性比迁移的个体移动更多的目标导向和更短的距离。居住蛇和迁移蛇的栖息地使用没有差异;它们通常在灌木丛、芦苇和高大的植被中发现。栖息地偏好(与可用性相关的使用)表明,茂密的栖息地、高大的草地植被和芦苇床的使用与可用性成比例,而森林和开阔草地的使用低于基于可用性的预期。我们的研究强调了保护和恢复线性栖息地组成部分的重要性,这些组成部分为草蛇的保护提供了庇护所和连通性。我们认为,在草蛇的运动研究中,外部应用的发射器比手术植入的发射器更好,而移位作为一种保护蛇的方法也有缺点。
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引用次数: 0
Microhabitat preference of the critically endangered golden mantella frog in Madagascar 极度濒危的马达加斯加金蝠鲼蛙的微生境偏好
IF 1 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2019-10-01 DOI: 10.33256/hj29.4.207213
W. Edwards, R. Griffiths, Michael J. Bungard, E. F. Rakotondrasoa, J. Razafimanahaka, Pierre Razafindraibe, R. R. Andriantsimanarilafy, J. C. Randrianantoandro
The golden mantella (Mantella aurantiaca) is a critically endangered (CR) frog, endemic to the eastern rainforestsof Madagascar. Although the species is very popular in the pet trade and widely bred in captivity, its specific habitat requirements in the wild are poorly understood. Ten forested sites in the Moramanga district of Madagascar were surveyed for microhabitat and environmental variables, and the presence or absence of golden mantellas in quadrats positioned along transects in the vicinity of breeding sites. Mixed models were used to determine which variables best explained microhabitat use by golden mantellas. Sites where golden mantellas were found tended to have surface temperatures of 20-23 ˚C, UVI units at about 2.9, about 30 % canopy cover, and around 30 % herbaceous cover. Within sites, golden mantellas preferred microhabitats that had 70 % leaf litter coverage and relatively low numbers of tree roots. This information can be used to improve the identification and management of habitats in the wild, as well as to refine captive husbandry needs.
金曼特拉(mantella aurantica)是一种极度濒危(CR)蛙,马达加斯加东部雨林特有。尽管该物种在宠物贸易中非常受欢迎,并被广泛圈养,但人们对其在野外的具体栖息地要求知之甚少。对马达加斯加Moramanga区的10个森林点进行了微观栖息地和环境变量调查,以及在繁殖点附近沿样带定位的象限中是否存在金色斗篷。使用混合模型来确定哪些变量最能解释金斗篷对微栖息地的使用。发现金色斗篷的地点的表面温度往往为20-23˚C,UVI单位约为2.9,树冠覆盖率约为30%,草本覆盖率约30%。在这些地点内,金曼特拉更喜欢落叶覆盖率为70%、树根数量相对较低的微栖息地。这些信息可用于改善野外栖息地的识别和管理,以及完善圈养畜牧业的需求。
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引用次数: 7
Emerging infectious disease threats to European herpetofauna 欧洲疱疹病毒的新发传染病威胁
IF 1 4区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2019-10-01 DOI: 10.33256/hj29.4189-206
S. J. R. Allain, A. Duffus
In the past decade, infectious disease threats to European herpetofauna have become better understood. Since the 1990s, three major emerging infections in amphibians have been identified (Batrachochytrium dendrobatidis, B. salamandrivorans, and ranaviruses) as well as at least one of unknown status (herpesviruses), while two major emerging infections of reptiles (Ophidiomyces ophiodiicola and ranaviruses) have been identified in wild European populations. The effects of emerging infections on populations have ranged from non-existent to local extirpation. In this article, we review these major infectious disease threats to European herpetofauna, including descriptions of key mortality and/or morbidity events in Europe of their emergence, and address both the distribution and the host diversity of the agent. Additionally, we direct the reader tonewly developed resources that facilitate the study of infectious agents in herpetofauna and again stress the importance of an interdisciplinary approach to examining these infectious diseases.
在过去的十年里,人们对欧洲疱疹病毒的传染病威胁有了更好的了解。自20世纪90年代以来,已经在两栖动物中发现了三种主要的新出现的感染(树状蝙蝠蛛、蝾螈和蛙病毒),以及至少一种未知状态的感染(疱疹病毒),而在欧洲野生种群中发现了两种主要的爬行动物新出现的传染(蛇腹真菌和蛙病毒。新出现的感染对人群的影响从根本不存在到局部根除。在这篇文章中,我们回顾了欧洲疱疹病毒的这些主要传染病威胁,包括对其出现时欧洲主要死亡和/或发病事件的描述,并讨论了病原体的分布和宿主多样性。此外,我们指导读者开发了促进疱疹病毒感染源研究的资源,并再次强调了跨学科方法检查这些传染病的重要性。
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引用次数: 14
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Herpetological Journal
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