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Protein-Protein Interactions 蛋白质相互作用
IF 2.781 Pub Date : 2015-01-01 DOI: 10.1007/978-1-4939-2425-7
C. L. Meyerkord, H. Fu
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引用次数: 19
Long-Range Charge Separation in a Ferrocene-(zinc Porphyrin)-Naphtalenediimide Triad. Asymmetric Role of 1,2,3-Triazole Linkers 二茂铁-(卟啉锌)-萘二酰亚胺三元组的远距离电荷分离。1,2,3-三唑类连接物的不对称作用
IF 2.781 Pub Date : 2013-09-12 DOI: 10.1021/JP406405K
M. Natali, M. Ravaglia, F. Scandola, J. Boixel, Y. Pellegrin, E. Blart, F. Odobel
New dyad and triad systems based on a zinc porphyrin (ZnP), a naphthalenediimide (NDI), and a ferrocene (Fc) as molecular components, linked by 1,2,3-triazole bridges, ZnP-NDI (3) and Fc-ZnP-NDI (4), have been synthesized. Their photophysical behavior has been investigated by both visible excitation of the ZnP chromophore and UV excitation of the NDI unit. Dyad 3 exhibits relatively inefficient quenching of the ZnP singlet excited state, slow charge separation, and fast charge recombination processes. Excitation of the NDI chromophore, on the other hand, leads to charge separation by both singlet and triplet quenching pathways, with the singlet charge-separated (CS) state recombining in a subnanosecond time scale and the triplet CS state decaying in ca. 90 ns. In the triad system 4, primary formation of the Fc-ZnP+-NDI- charge-separated state is followed by a secondary hole shift process from ZnP to Fc. The product of the stepwise charge separation, Fc+-ZnP-NDI-, undergoes recombination to the ground state in 1.9 μs. The charge-separated states are always formed more efficiently upon NDI excitation than upon ZnP excitation. DFT calculations on a bridge-acceptor fragment show that the bridge is expected to mediate a fast donor-to-bridge-to-acceptor electron cascade following excitation of the acceptor. More generally, triazole bridges may behave asymmetrically with respect to photoinduced electron transfer in dyads, kinetically favoring hole-transfer pathways triggered by excitation of the acceptor over electron-transfer pathways promoted by excitation of the donor.
以卟啉锌(ZnP)、萘二酰亚胺(NDI)和二茂铁(Fc)为分子组分,通过1,2,3-三唑桥连接,合成了ZnP-NDI(3)和Fc-ZnP-NDI(4)的二联体和三联体体系。通过ZnP发色团的可见光激发和NDI单元的紫外激发,研究了它们的光物理行为。Dyad 3表现出相对低效的ZnP单线态猝灭、缓慢的电荷分离和快速的电荷复合过程。另一方面,NDI发色团的激发通过单线态和三重态猝灭途径导致电荷分离,单线态电荷分离(CS)态在亚纳秒时间尺度内重组,三重态CS态在约90 ns内衰减。在三元体系4中,Fc-ZnP+- ndi -电荷分离态的初级形成伴随着从ZnP到Fc的二次空穴移位过程。分步电荷分离的产物Fc+- znp - ndi -在1.9 μs内重新组合到基态。NDI激发总是比ZnP激发更有效地形成电荷分离态。对桥-受体片段的DFT计算表明,在受体激发后,桥有望介导快速的供体-桥-受体电子级联。更一般地说,三唑桥在二偶体中可能表现出不对称的光诱导电子转移,动力学上倾向于由受体激发引发的空穴转移途径,而不是由供体激发促进的电子转移途径。
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引用次数: 30
Spectroscopic Evidence of Work Function Alterations Due to Photoswitchable Monolayers on Gold Surfaces 光谱学证据表明,由于在金表面的光切换单层功函数的改变
IF 2.781 Pub Date : 2013-09-11 DOI: 10.1021/JP405710U
Matthew A. Bartucci, J. Florián, J. Ciszek
Taking advantage of surfaces’ response to interfacial dipoles, a class of photochromophores (dihydroindolizine) is demonstrated to alter the work function of the underlying substrate (∼170 meV). This same molecule also provides spectroscopic signatures for correlating the change in molecular structure to the induced change in the surfaces’ electronic properties. Polarization modulation infrared reflection absorption spectroscopy (PM-IRRAS) allows analysis of the characteristic dihydroindolizine C═C (1559 cm–1) and pyridinium (1643 cm–1) stretch as a function of photoexcitation. Structural assignments of this photochromophore are corroborated to density function theory calculations. Conformational changes in the monolayers appear in parallel with work function changes and are consistent with both its rate and magnitude.
利用表面对界面偶极子的响应,一类光发色团(二氢吲哚嗪)被证明可以改变衬底的功函数(~ 170 meV)。这个分子还提供了光谱特征,将分子结构的变化与表面电子性质的诱导变化联系起来。偏振调制红外反射吸收光谱(PM-IRRAS)允许分析二氢吲哚嗪C = C (1559 cm-1)和吡啶(1643 cm-1)作为光激发函数的特征拉伸。该光发色团的结构分配得到密度函数理论计算的证实。单分子层的构象变化与功函数变化平行,且与功函数变化的速率和幅度一致。
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引用次数: 9
Site Preferences of Carboxyl Groups on the Periphery of Graphene and their Characteristic IR Spectra 石墨烯外围羧基的位置偏好及其特征红外光谱
IF 2.781 Pub Date : 2013-08-26 DOI: 10.1021/JP403728B
T. Kar, S. Scheiner, U. Adhikari, A. Roy
Energetics of carboxyl groups at the periphery of a graphene sheet are studied using density functional theory (B3LYP) with a 6-31G* basis set, augmented with diffuse functions on O. Corner sites are energetically preferred followed by zigzag edges, and armchair edges are least stable. The energy and geometry of each is attributed to a competition between π-conjugation and steric repulsion factors. Vibrational analyses reveal certain features that are characteristic of each site location, which may help in the assignment of experimental spectra of graphene and other polycyclic aromatic hydrocarbons. For example, zigzag sites typically lead to an intense C═O stretching band that occurs below 1700 cm–1, quite uncommon for the carboxyl group.
利用密度泛函理论(B3LYP)在6-31G*基集上研究了石墨烯片外围羧基的能量学,并在o上增广了扩散函数。角点的能量优先,其次是锯齿形边缘,而椅形边缘最不稳定。它们的能量和几何形状都归因于π共轭和空间排斥因子之间的竞争。振动分析揭示了每个位点的某些特征,这可能有助于石墨烯和其他多环芳烃的实验光谱分配。例如,锯齿状位点通常会导致在1700 cm-1以下出现强烈的C = O拉伸带,这在羧基中是很不常见的。
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引用次数: 15
Effect of Thermal Annealing in Ammonia on the Properties of InGaN Nanowires with Different Indium Concentrations 氨热退火对不同铟浓度InGaN纳米线性能的影响
IF 2.781 Pub Date : 2013-01-31 DOI: 10.1021/JP311685X
C. Hahn, A. Cordones, Sean Andrews, Hanwei Gao, Anthony Fu, S. Leone, Peidong Yang
The utility of an annealing procedure in ammonia ambient is investigated for improving the optical characteristics of InxGa1–xN nanowires (0.07 ≤ x ≤ 0.42) grown on c-Al2O3 using a halide chemical vapor deposition method. Morphological studies using scanning electron microscopy confirm that the nanowire morphology is retained after annealing in ammonia at temperatures up to 800 °C. However, significant indium etching and composition inhomogeneities are observed for higher indium composition nanowires (x = 0.28, 0.42), as measured by energy-dispersive X-ray spectroscopy and Z-contrast scanning transmission electron microscopy. Structural analyses, using X-ray diffraction and high-resolution transmission electron microscopy, indicate that this is a result of the greater thermal instability of higher indium composition nanowires. The effect of these structural changes on the optical quality of InGaN nanowires is examined using steady-state and time-resolved photoluminescence measurements. Annealing in ammoni...
利用卤化物化学气相沉积法,研究了氨环境下退火工艺对在c-Al2O3上生长的InxGa1-xN纳米线(0.07≤x≤0.42)光学特性的改善作用。形态学研究使用扫描电子显微镜证实,纳米线形态后,在氨退火温度高达800°C后保留。然而,通过能量色散x射线光谱和z -对比扫描透射电子显微镜测量,在高铟成分纳米线(x = 0.28, 0.42)中观察到明显的铟蚀刻和成分不均匀性。利用x射线衍射和高分辨率透射电子显微镜进行的结构分析表明,这是由于铟含量高的纳米线具有更大的热不稳定性。这些结构变化对InGaN纳米线光学质量的影响通过稳态和时间分辨光致发光测量来检测。氨水退火…
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引用次数: 9
Evidence of Nanometric-Sized Phosphate Clusters in Bioactive Glasses As Revealed by Solid-State 31P NMR 固态31P核磁共振揭示了生物活性玻璃中纳米级磷酸盐团簇的证据
IF 2.781 Pub Date : 2013-01-25 DOI: 10.1021/JP312263J
F. Fayon, C. Duee, Thomas Poumeyrol, M. Allix, D. Massiot
Bioactive glasses are able to form strong bonds to bone. This property, crucial for medical applications, depends on the glass composition and structure. Dissolution of phosphates in melt-quenched silicate glasses raises the question of chemical homogeneity and possible formation of clusters. A detailed structural characterization of the bioactive glasses is thus highly desirable. In this work, the nature of the distribution of phosphate units in a melt-quenched bioactive glass is elucidated for the first time using 31P spin-counting solid-state NMR experiments. The structure of a dense bioactive calcium silicate glass with 2.6 mol % of phosphorus oxide is shown to exhibit nanometric-sized chemical and structural heterogeneities. Clear experimental evidence of the presence of phosphate clusters of five and six PO4 tetrahedral units embedded in the disordered polymeric silicate network is given.
生物活性玻璃能够与骨骼形成牢固的结合。这一特性对医疗应用至关重要,取决于玻璃的成分和结构。磷酸盐在熔融淬火硅酸盐玻璃中的溶解提出了化学均匀性和可能形成团簇的问题。因此,生物活性玻璃的详细结构表征是非常需要的。在这项工作中,首次利用31P自旋计数固体核磁共振实验阐明了磷酸盐单元在熔融淬火生物活性玻璃中的分布性质。含有2.6 mol %氧化磷的致密生物活性硅酸钙玻璃的结构显示出纳米级的化学和结构非均质性。明确的实验证据表明,在无序聚合物硅酸盐网络中嵌入了5个和6个PO4四面体单元的磷酸盐簇。
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引用次数: 52
Electronic Structure Modeling of Electrochemical Reactions at Electrode/Electrolyte Interfaces in Lithium Ion Batteries 锂离子电池电极/电解质界面电化学反应的电子结构建模
IF 2.781 Pub Date : 2012-12-13 DOI: 10.1021/jp308929a
K. Leung
We review recent ab initio molecular dynamics studies of electrode/electrolyte interfaces in lithium ion batteries. Our goals are to introduce experimentalists to simulation techniques applicable to models which are arguably most faithful to experimental conditions so far, and to emphasize to theorists that the inherently interdisciplinary nature of this subject requires bridging the gap between solid and liquid state perspectives. We consider liquid ethylene carbonate (EC) decomposition on lithium intercalated graphite, lithium metal, oxide-coated graphite, and spinel manganese oxide surfaces. These calculations are put in the context of more widely studied water–solid interfaces. Our main themes include kinetically controlled two-electron-induced reactions, the breaking of a previously much neglected chemical bond in EC, and electron tunneling. Future work on modeling batteries at atomic length scales requires capabilities beyond state-of-the-art, which emphasizes that applied battery research can and s...
本文综述了近年来锂离子电池电极/电解质界面从头算分子动力学的研究进展。我们的目标是向实验学家介绍适用于模型的模拟技术,这些模型可以说是迄今为止最忠实于实验条件的,并向理论家强调,这一学科固有的跨学科性质需要弥合固体和液体状态观点之间的差距。我们考虑了液体碳酸乙烯(EC)在锂插层石墨、锂金属、氧化石墨和尖晶石锰氧化物表面上的分解。这些计算是在更广泛研究的水-固界面的背景下进行的。我们的主题包括动力学控制的双电子诱导反应,EC中先前被忽视的化学键的断裂,以及电子隧穿。未来在原子长度尺度上对电池进行建模的工作需要超越最先进的能力,这强调了应用电池研究可以并且可以…
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引用次数: 121
Unusual Low-Vibrational C═O Mode of COOH Can Distinguish between Carboxylated Zigzag and Armchair Single-Wall Carbon Nanotubes COOH异常的低振动C = O模式可以区分羧基化之字形碳纳米管和扶手状碳纳米管
IF 2.781 Pub Date : 2012-11-28 DOI: 10.1021/JP309699Z
T. Kar, S. Scheiner, A. Roy, H. Bettinger
Vibrational frequency analysis using density functional theory resolves some ambiguities in interpretation of IR spectra of carboxylated single-wall carbon nanotubes (o-SWNTs). Armchair (n,n) and zigzag (m,0) tubes, with diameter varying between 0.5 and 1.4 nm, were populated with different numbers of COOH groups at one terminus. While armchair-COOH tubes exhibit C═O stretching frequencies in the standard range of 1720–1760 cm–1, zigzag-COOH tubes display a new C═O band around 1650 cm–1 with much higher intensity, in addition to the higher-frequency C═O mode. The COOH groups exhibiting this low-frequency (lf-COOH) are displaced well off the lines of the tube walls, to the outside. This new band is in the same range as one observed experimentally, which has on occasion been attributed to quinone formation. The C═O bond length in the relevant COOH groups is longer by about 0.01 A than regular C═O bonds. Such low-frequency C═O band is unusual and not common for any stand-alone COOH group and seems characteri...
利用密度泛函理论进行振动频率分析,解决了羧化单壁碳纳米管红外光谱解释中的一些歧义。直径在0.5 ~ 1.4 nm之间的扶手形管(n,n)和之字形管(m,0)在一端填充不同数量的COOH基团。当armchair-COOH管在1720-1760 cm-1的标准范围内显示C = O拉伸频率时,zigzag-COOH管在1650 cm-1附近显示一个新的C = O波段,除了高频的C = O模式外,强度更高。表现出这种低频(lf-COOH)的COOH群被很好地从管壁的线条转移到外部。这个新波段与实验观察到的波段在同一范围内,这有时被归因于醌的形成。相关COOH基团中的C = O键长度比常规的C = O键长约0.01 A。这种低频C = O波段是不寻常的,在任何独立的COOH组中都不常见,而且似乎具有特征……
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引用次数: 13
Reliability of Approximate Methods to Study Tip-Functionalized Single-Wall Carbon Nanotubes 尖端功能化单壁碳纳米管近似研究方法的可靠性
IF 2.781 Pub Date : 2012-11-16 DOI: 10.1021/JP3089947
T. Kar, S. Scheiner
Calculations of the full structure and spectra of large nanotubes can be very demanding of computer resources. The advantages and limitations of the cost-effective same level different basis (SLDB) and selected normal modes (SNM) protocols are elucidated for carboxylated (4,4) armchair and (8,0) zigzag single-wall carbon nanotubes (SWNTs) with varying numbers of COOH groups on the tips of the tubes. While armchair-COOH tubes exhibit C═O stretching frequencies in the standard range of 1720–1760 cm–1, zigzag-COOH tubes display a surprising C═O band around 1660 cm–1 with much higher intensity, in addition to the higher-frequency C═O mode. This low-frequency C═O peak is very unusual for a standalone COOH group and is a fingerprint of zigzag tubes.
计算大型纳米管的完整结构和光谱对计算机资源的要求非常高。对羧基化(4,4)扶手型和(8,0)之字形单壁碳纳米管(SWNTs)尖端羧基数目不同的碳纳米管(SWNTs),阐述了具有成本效益的同能级不同基(SLDB)和选择正常模式(SNM)方案的优点和局限性。当armchair-COOH管在1720-1760 cm-1的标准范围内显示C = O拉伸频率时,zigzag-COOH管在1660 cm-1附近显示令人惊讶的C = O波段,并且强度更高,此外还有更高频率的C = O模式。这个低频C = O峰对于一个独立的COOH基团来说是非常不寻常的,并且是锯齿形管的指纹。
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引用次数: 13
Role of Nanoparticle Surface Charge on the Nucleation of the Electroactive β-Poly(vinylidene fluoride) Nanocomposites for Sensor and Actuator Applications 纳米粒子表面电荷对电活性β-聚偏氟乙烯纳米复合材料成核的作用
IF 2.781 Pub Date : 2012-07-11 DOI: 10.1021/JP3038768
P. Martins, C. Caparrós, R. Gonçalves, P. Martins, M. Benelmekki, G. Botelho, S. Lanceros‐Méndez
The electroactive β-phase of poly(vinylidene fluoride) (PVDF) can be nucleated by introducing CoFe2O4 nanoparticles within the polymer matrix, leading to electroactive materials with large potential for sensor and actuator applications. The effects of the CoFe2O4 nanoparticle electrostatic charge on the phase crystallization of PVDF polymer is reported. For this purpose, CoFe2O4 nanoparticles were coated with anionic (SDS), nonanionic (Triton X-100), and cationic (CTAB) surfactants, and the obtained coated nanoparticles were used as fillers. It is found that the piezoelectric β-form of the polymer increases when CoFe2O4 nanoparticles with higher negative electrostatic charge are added. This behavior is attributed to the interaction between the negatively charged magnetic particles and the polymer CH2 groups, having a positive charge density. Further the relationship between the β-phase content and the piezoelectric response has been demonstrated. The magnetostriction of the ferrite nanoparticles and the p...
通过在聚合物基体中引入CoFe2O4纳米颗粒,聚偏氟乙烯(PVDF)的电活性β相可以成核,从而使电活性材料在传感器和执行器中具有很大的应用潜力。报道了CoFe2O4纳米粒子静电电荷对PVDF聚合物相结晶的影响。为此,将CoFe2O4纳米粒子包被阴离子(SDS)、非阴离子(Triton X-100)和阳离子(CTAB)表面活性剂,得到的包被纳米粒子用作填料。结果表明,当加入具有较高负电荷的CoFe2O4纳米粒子时,聚合物的压电β-形态增加。这种行为归因于带负电荷的磁性粒子与具有正电荷密度的聚合物CH2基团之间的相互作用。进一步证明了β相含量与压电响应之间的关系。铁氧体纳米粒子的磁致伸缩性能和p…
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引用次数: 201
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The Journal of Physical Chemistry
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