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Alzheimer's disease PSEN-2 N141I mutation reveals altered and shear-sensitive brain endothelial cell-like phenotype in human iPSC-derived models. 阿尔茨海默病PSEN-2 N141I突变在人类ipsc衍生模型中揭示了改变和剪切敏感的脑内皮细胞样表型。
IF 5.7 2区 医学 Q1 NEUROSCIENCES Pub Date : 2025-11-11 DOI: 10.1186/s40478-025-02152-3
Lily E Takeuchi, Jennifer Lam, Craig A Simmons

Drug discovery efforts in neurological diseases, such as Alzheimer's disease (AD), have had particularly poor outcomes due to the lack of models that recapitulate drug interactions at the cerebral vasculature. There is an unmet need to develop physiologically relevant models to study the impacts of blood flow-induced shear stress. In this work, we use a microfluidic platform to model the cerebral vasculature in AD using patient-derived brain endothelial-like cells (BECs). Induced pluripotent stem cells derived from a patient with familial AD (PSEN-2 N141I) and an unaffected control line were differentiated into BECs (AD2-BEC and fControl-BEC, respectively). BECs were exposed to static conditions or 12 dynes/cm2 of shear stress for 72 h prior to assessment of barrier permeability using fluorescent tracer assays, monocyte adhesion, and efflux transport function using receptor-inhibition assays. Upon shear conditioning, BECs demonstrated shear responsiveness through greater cell alignment in the direction of flow. AD2-BECs demonstrated reduced capacity for efflux transport by p-glycoprotein (P-gp), breast cancer resistant protein (BCRP), and multidrug resistant protein (MRP1) compared to controls (fControl-BECs, p = 0.0017, p = 0.0004, p = 0.0002, respectively). Upon application of shear conditioning, impairments to efflux transport in AD2-BECs were ameliorated. AD2-BECs also exhibited increased monocyte adhesion (2.2 ± 0.4-fold; p < 0.0001) which was further reduced by the application of shear stress in both lines. Taken together, these observations suggest the lack of shear stress exacerbates altered BEC phenotype in fAD. To our knowledge, we present the first in depth functional characterization of in vitro AD patient-derived BECs in both static and physiologically relevant shear conditions in which lack of shear reveals dysfunction of the cerebral endothelium in AD relevant to drug transport and immune cell trafficking.

神经系统疾病的药物发现工作,如阿尔茨海默病(AD),由于缺乏在脑血管系统中概括药物相互作用的模型,结果特别差。有一个未满足的需要,开发生理学相关的模型来研究血流诱导的剪切应力的影响。在这项工作中,我们使用微流控平台使用患者源性脑内皮样细胞(BECs)来模拟AD患者的脑血管系统。来自家族性AD患者(PSEN-2 N141I)和未受影响的对照系的诱导多能干细胞分化为BECs(分别为AD2-BEC和fControl-BEC)。BECs在静态条件下或12 dynes/cm2的剪切应力下暴露72小时,然后使用荧光示踪法评估屏障通透性,使用单核细胞粘附性和使用受体抑制法评估外排转运功能。在剪切条件下,BECs通过在流动方向上更大的细胞排列表现出剪切响应性。与对照组相比,AD2-BECs显示p-糖蛋白(p- gp)、乳腺癌耐药蛋白(BCRP)和多药耐药蛋白(MRP1)的外排转运能力降低(fControl-BECs, p = 0.0017, p = 0.0004, p = 0.0002)。应用剪切调节后,AD2-BECs对外排转运的损害得到改善。AD2-BECs也表现出单核细胞粘附增加(2.2±0.4倍
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引用次数: 0
Anle138b mitigates post-hypoxic cognitive impairment, α-Synuclein aggregation and UPR activation in Drosophila melanogaster. Anle138b减轻果蝇缺氧后认知障碍、α-Synuclein聚集和UPR激活。
IF 5.7 2区 医学 Q1 NEUROSCIENCES Pub Date : 2025-11-11 DOI: 10.1186/s40478-025-02099-5
Aaron T Fehr, Jennifer Jung, Alma Kokott-Vuong, Sabri E M Sahnoun, Aya A Ezzat, Michael Huber, Tonya M Bliss, Aaron Voigt, Jörg B Schulz, Pardes Habib

Cerebral ischemia increases the risk of post-stroke cognitive impairment (PSCI), but the underlying molecular mechanisms remain unclear. Emerging evidence suggests that hypoxia/ischemia-induced oxidative and endoplasmic reticulum (ER) stress may contribute to protein misfolding and α-Synuclein (α-Syn) aggregation, potentially triggering the unfolded protein response (UPR) to alleviate ER stress. Using bimolecular fluorescence complementation in Drosophila melanogaster and HEK-293 cells, we investigated the effect of acute, repetitive and chronic hypoxia on α-Syn aggregation, UPR activation, mortality, longevity, locomotor function, sleep, and cognition. Furthermore, we evaluated the post-hypoxic in vivo biodistribution and therapeutic efficacy of the aggregation inhibitor anle138b. Acute severe hypoxia induced more α-Syn aggregation than chronic or repetitive hypoxia, resulting in higher mortality, reduced longevity, delayed motor recovery, cognitive impairment, and activation of the detrimental PERK branch of the UPR. Anle138b significantly reduced α-Syn aggregation, repressing post-hypoxic PERK activation and improving survival and decision-making. Our findings demonstrate the effectiveness of anle138b in mitigating hypoxia-induced α-Syn aggregation and cognitive impairment, paving the way for future studies on its potential as a therapeutic strategy for PSCI.

脑缺血增加脑卒中后认知障碍(PSCI)的风险,但其潜在的分子机制尚不清楚。新的证据表明,缺氧/缺血诱导的氧化和内质网(ER)应激可能导致蛋白质错误折叠和α-突触核蛋白(α-Syn)聚集,可能引发未折叠蛋白反应(UPR)以减轻内质网应激。我们利用黑腹果蝇和HEK-293细胞的双分子荧光互补,研究了急性、重复和慢性缺氧对α-Syn聚集、UPR激活、死亡率、寿命、运动功能、睡眠和认知的影响。此外,我们评估了聚集抑制剂anle138b在缺氧后的体内生物分布和治疗效果。急性严重缺氧比慢性或重复性缺氧诱导更多α-Syn聚集,导致更高的死亡率、寿命缩短、运动恢复延迟、认知障碍和UPR中有害的PERK分支的激活。Anle138b显著降低α-Syn聚集,抑制缺氧后PERK激活,改善生存和决策。我们的研究结果证明了anle138b在减轻缺氧诱导的α-Syn聚集和认知障碍方面的有效性,为进一步研究其作为PSCI治疗策略的潜力铺平了道路。
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引用次数: 0
Correction: BDNF augmentation reverses cranial radiation therapy-induced cognitive decline and neurodegenerative consequences. 更正:BDNF增强逆转脑放射治疗引起的认知能力下降和神经退行性后果。
IF 5.7 2区 医学 Q1 NEUROSCIENCES Pub Date : 2025-11-10 DOI: 10.1186/s40478-025-02147-0
Sanad M El-Khatib, Arya R Vagadia, Anh C D Le, Janet E Baulch, Ding Quan Ng, Mingyu Du, Kevin G Johnston, Zhiqun Tan, Xiangmin Xu, Alexandre Chan, Munjal M Acharya
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引用次数: 0
Pathobiology of the autophagy-lysosomal pathway in the Huntington's disease brain. 亨廷顿氏病脑自噬-溶酶体途径的病理生物学研究。
IF 5.7 2区 医学 Q1 NEUROSCIENCES Pub Date : 2025-11-07 DOI: 10.1186/s40478-025-02131-8
Martin J Berg, Veeranna, Corrinne M Rosa, Asok Kumar, Panaiyur S Mohan, Philip Stavrides, Sandipkumar Darji, Deanna M Marchionini, Dun-Sheng Yang, Ralph A Nixon

Background: Accumulated levels of mutant huntingtin protein (mHTT) and its fragments are considered contributors to the pathogenesis of Huntington's disease (HD). Stimulating autophagy may enhance clearance of mHTT and its aggregates which has been considered as a possible therapeutic strategy. However, the role and competence of the autophagy-lysosomal pathway (ALP) during HD progression in the human disease remains largely unknown.

Methods: Here, we used multiplex confocal and ultrastructural immunocytochemical analyses of ALP functional markers in relation to mHTT aggresome pathology in striatum and the less affected cortex or cerebellum of HD brains staged from Grade HD2 to HD4 by Vonsattel neuropathological criteria compared to controls.

Results: Immunolabeling revealed the localization of HTT/mHTT in ALP vesicular compartments labeled by autophagy-related adaptor proteins sequestosome 1 (p62/SQSTM1) and ubiquitin, and cathepsin D (CTSD) as well as HTT-positive inclusions. Although comparatively normal at HD2, neurons at later HD stages exhibited progressive enlargement and clustering of CTSD-immunoreactive autolysosomes/lysosomes and, ultrastructurally, autophagic vacuole/lipofuscin granules accumulated progressively, more prominently in striatum than cortex. These changes were accompanied by rises in levels of HTT/mHTT and p62/SQSTM1, particularly their fragments, in striatum but not in the cortex, and by increases of LAMP1 and LAMP2 RNA and LAMP1 protein. In addition, cargo-loaded autophagosomes and cathepsin-positive autolysosomes were readily observed, implying a lack of significant blockage in autophagosome formation and autophagosome-lysosome fusion.

Conclusions: The findings collectively suggest that upregulated lysosomal biogenesis and preserved proteolysis maintain autophagic clearance in early-stage HD, but the observed progressive HTT build-up and AL accumulation at advanced disease stages may signify a failure in autophagy substrate clearance. These findings support the prospect that ALP stimulation applied at early disease stages, when clearance machinery is fully competent, could lead to therapeutic benefits in HD patients.

背景:突变亨廷顿蛋白(mHTT)及其片段的积累水平被认为是亨廷顿病(HD)发病机制的贡献者。刺激自噬可以增强mHTT及其聚集物的清除,这被认为是一种可能的治疗策略。然而,自噬-溶酶体途径(ALP)在人类疾病HD进展中的作用和能力在很大程度上仍然未知。方法:本研究采用多重共聚焦和超微结构免疫细胞化学方法,对以Vonsattel神经病理标准划分为HD2级至HD4级的HD脑纹状体和受影响较小的皮层或小脑中与mHTT聚集体病理相关的ALP功能标志物进行分析。结果:免疫标记显示HTT/mHTT定位于由自噬相关接头蛋白sequestosome 1 (p62/SQSTM1)和泛素、组织蛋白酶D (CTSD)以及HTT阳性包涵体标记的ALP囊室中。虽然在HD2阶段相对正常,但在HD晚期,神经元表现出渐进式扩大和ctsd免疫反应性自溶酶体/溶酶体聚集,超微结构上,自噬液泡/脂褐质颗粒逐渐积聚,纹状体比皮层更明显。这些变化伴随着纹状体中而非皮层中HTT/mHTT和p62/SQSTM1水平的升高,尤其是它们的片段,以及LAMP1和LAMP2 RNA和LAMP1蛋白的增加。此外,很容易观察到载货自噬体和组织蛋白酶阳性的自噬体,这意味着自噬体的形成和自噬体与溶酶体的融合没有明显的阻碍。结论:这些发现共同表明,在早期HD中,溶酶体生物发生的上调和保留的蛋白水解维持了自噬清除,但在疾病晚期观察到的渐进式HTT积累和AL积累可能意味着自噬底物清除的失败。这些发现支持了在疾病早期应用ALP刺激的前景,当清除机制完全胜任时,可以为HD患者带来治疗益处。
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引用次数: 0
EZHIP boosts neuronal-like synaptic gene programs and depresses polyamine metabolism. EZHIP促进神经元样突触基因程序和抑制多胺代谢。
IF 5.7 2区 医学 Q1 NEUROSCIENCES Pub Date : 2025-11-07 DOI: 10.1186/s40478-025-02141-6
Elham Hasheminasabgorji, Huey-Miin Chen, Taylor A Gatesman, Subhi Talal Younes, Gabrielle A Nobles, Farhang Jaryani, Heather Mao, Kwanha Yu, Benjamin Deneen, Wee Yong, Michael D Taylor, Sameer Agnihotri, Marco Gallo

It is currently understood that the characteristic loss of the repressive histone mark H3K27me3 in PFA ependymoma and diffuse midline glioma (DMG) are caused by complementary mechanisms mediated by EZHIP and the oncohistone H3K27M, respectively. To support the complementarity of these mechanisms, rare H3K27M-negative DMGs express EZHIP. Interestingly, EZHIP is one of the few genes recurrently mutated in PFA. The significance of EZHIP mutations in PFA, and whether EZHIP has wider functions in addition to repression of H3K27me3 deposition, are not known. Here, we investigated the mutational landscape of EZHIP in pediatric brain tumors. We found that EZHIP mutations occur not only in PFA, but also in rare medulloblastoma and pediatric high-grade glioma (HGG), including in H3K27-positive DMG. Contrary to current expectations, we show that mutant EZHIP is expressed in H3K27M-positive DMG. All the EZHIP-mutated HGG cases also have EGFR mutations. Further, we pursued better understanding of the function of EZHIP by expressing it in human-derived neural models. Our transcriptomic analyses indicate that EZHIP expression potentiates neuronal-like gene programs associated with synaptic function. Metabolomics data indicate that EZHIP leads to repression of methionine and polyamine metabolism, suggesting links between metabolic and epigenetic changes that are observed in PFA. Collectively, our results expand the repertoire of tumor types known to harbor EZHIP mutations and shed light on EZHIP-dependent metabolic and transcriptional programs in relevant neural models.

目前了解到PFA室管膜瘤和弥漫性中线胶质瘤(DMG)中抑制性组蛋白标记H3K27me3的特征性缺失分别是由EZHIP和肿瘤组蛋白H3K27M介导的互补机制引起的。为了支持这些机制的互补性,罕见的h3k27m阴性dmg表达EZHIP。有趣的是,EZHIP是PFA中少数反复突变的基因之一。EZHIP突变在PFA中的意义以及EZHIP除抑制H3K27me3沉积外是否具有更广泛的功能尚不清楚。在这里,我们研究了EZHIP在儿童脑肿瘤中的突变情况。我们发现EZHIP突变不仅发生在PFA中,也发生在罕见的髓母细胞瘤和小儿高级胶质瘤(HGG)中,包括h3k27阳性的DMG。与目前的预期相反,我们发现EZHIP突变体在h3k27m阳性的DMG中表达。所有ezhip突变的HGG病例也有EGFR突变。此外,我们通过在人源性神经模型中表达EZHIP来更好地了解其功能。我们的转录组学分析表明,EZHIP的表达增强了与突触功能相关的神经元样基因程序。代谢组学数据表明,EZHIP导致蛋氨酸和多胺代谢的抑制,这表明在PFA中观察到的代谢和表观遗传变化之间存在联系。总的来说,我们的研究结果扩大了已知含有EZHIP突变的肿瘤类型的范围,并揭示了相关神经模型中EZHIP依赖性代谢和转录程序。
{"title":"EZHIP boosts neuronal-like synaptic gene programs and depresses polyamine metabolism.","authors":"Elham Hasheminasabgorji, Huey-Miin Chen, Taylor A Gatesman, Subhi Talal Younes, Gabrielle A Nobles, Farhang Jaryani, Heather Mao, Kwanha Yu, Benjamin Deneen, Wee Yong, Michael D Taylor, Sameer Agnihotri, Marco Gallo","doi":"10.1186/s40478-025-02141-6","DOIUrl":"10.1186/s40478-025-02141-6","url":null,"abstract":"<p><p>It is currently understood that the characteristic loss of the repressive histone mark H3K27me3 in PFA ependymoma and diffuse midline glioma (DMG) are caused by complementary mechanisms mediated by EZHIP and the oncohistone H3K27M, respectively. To support the complementarity of these mechanisms, rare H3K27M-negative DMGs express EZHIP. Interestingly, EZHIP is one of the few genes recurrently mutated in PFA. The significance of EZHIP mutations in PFA, and whether EZHIP has wider functions in addition to repression of H3K27me3 deposition, are not known. Here, we investigated the mutational landscape of EZHIP in pediatric brain tumors. We found that EZHIP mutations occur not only in PFA, but also in rare medulloblastoma and pediatric high-grade glioma (HGG), including in H3K27-positive DMG. Contrary to current expectations, we show that mutant EZHIP is expressed in H3K27M-positive DMG. All the EZHIP-mutated HGG cases also have EGFR mutations. Further, we pursued better understanding of the function of EZHIP by expressing it in human-derived neural models. Our transcriptomic analyses indicate that EZHIP expression potentiates neuronal-like gene programs associated with synaptic function. Metabolomics data indicate that EZHIP leads to repression of methionine and polyamine metabolism, suggesting links between metabolic and epigenetic changes that are observed in PFA. Collectively, our results expand the repertoire of tumor types known to harbor EZHIP mutations and shed light on EZHIP-dependent metabolic and transcriptional programs in relevant neural models.</p>","PeriodicalId":6914,"journal":{"name":"Acta Neuropathologica Communications","volume":"13 1","pages":"227"},"PeriodicalIF":5.7,"publicationDate":"2025-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12593861/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145470572","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Employing nanopore sequencing on FFPE-derived DNA for CNS tumor diagnostics. 利用纳米孔测序对ffpe来源的DNA进行中枢神经系统肿瘤诊断。
IF 5.7 2区 医学 Q1 NEUROSCIENCES Pub Date : 2025-11-06 DOI: 10.1186/s40478-025-02172-z
Paul Kerbs, Michelle Brehm, Daniel Haag, Henri Bogumil, Areeba Patel, Martin Sill, Natalie Berghaus, Kirsten Göbel, Daniel Schrimpf, Ghazaleh Tabatabai, Jens Schittenhelm, Oliver Sakowitz, Christine Stadelmann, Roland Goldbrunner, Nima Etminan, Miriam Ratliff, Christel Herold-Mende, Sandro Krieg, Wolfgang Wick, David T W Jones, Andreas von Deimling, Felix Sahm, Pauline Göller
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引用次数: 0
α-Synuclein purification significantly impacts seed amplification assay performance and consistency. α-Synuclein的纯化显著影响种子扩增实验的性能和一致性。
IF 5.7 2区 医学 Q1 NEUROSCIENCES Pub Date : 2025-11-05 DOI: 10.1186/s40478-025-02151-4
Zaid A M Al-Azzawi, Nicholas R G Silver, Surabhi Mehra, Simeng Niu, Christopher Situ, Wen Luo, Irina Shlaifer, Martin Ingelsson, Bradley T Hyman, Jean-François Trempe, Thomas M Durcan, Joel C Watts, Edward A Fon

α-Synuclein seed amplification assays are a promising diagnostic tool for synucleinopathies such as Parkinson's disease and multiple system atrophy. Standardized conditions are required to ensure a high degree of inter- and intra-laboratory reproducibility when performing these assays. A significant issue that hinders the utility of seed amplification assays is the de novo aggregation propensity of the α-synuclein substrate as well as inter-batch heterogeneity. While much work has focused on determining appropriate seed amplification assay buffer compositions as well as the type and amount of seed used, a robust comparison of α-synuclein substrate purification methods has not been reported. We therefore compared the utility of recombinant α-synuclein purified using four different methods as seed amplification assay substrates across two laboratories. Osmotic shock-purified α-synuclein monomer substrate showed the lowest propensity for de novo aggregation, which translated into being the best substrate for seed amplification assay reactions seeded with α-synuclein preformed fibrils or patient brain homogenates. Furthermore, osmotic shock α-synuclein monomer showed the best inter-batch reproducibility compared to all other substrates tested. As α-synuclein seed amplification assays continue to evolve and move towards adoption in the clinical realm, this work showcases the vital importance of standardizing the production and characterization of recombinant α-synuclein substrate. We encourage the widespread adoption of osmotic shock α-synuclein monomer as the universal substrate for seed amplification assays to maximize intra- and inter-laboratory reproducibility.

α-突触核蛋白种子扩增检测是一种很有前途的突触核蛋白病诊断工具,如帕金森病和多系统萎缩。在进行这些分析时,需要标准化的条件来确保实验室间和实验室内的高度可重复性。阻碍种子扩增测定的一个重要问题是α-突触核蛋白底物的从头聚集倾向以及批间异质性。虽然很多工作都集中在确定适当的种子扩增试验缓冲成分以及使用的种子类型和数量上,但α-突触核蛋白底物纯化方法的可靠比较尚未报道。因此,我们比较了在两个实验室中使用四种不同方法纯化的重组α-突触核蛋白作为种子扩增实验底物的效用。渗透冲击纯化的α-突触核蛋白单体底物表现出最低的新生聚集倾向,这意味着它是用α-突触核蛋白预制原纤维或患者脑匀浆进行种子扩增实验的最佳底物。渗透冲击α-突触核蛋白单体的批间再现性优于其他底物。随着α-突触核蛋白种子扩增技术的不断发展和在临床领域的应用,这项工作表明了标准化重组α-突触核蛋白底物的生产和表征的重要性。我们鼓励广泛采用渗透冲击α-突触核蛋白单体作为种子扩增分析的通用底物,以最大限度地提高实验室内和实验室间的重复性。
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引用次数: 0
Correction: Distinct spatial transcriptomic patterns of substantia Nigra in Parkinson disease and Parkinsonian subtype of multiple system atrophy. 纠正:帕金森病和帕金森多系统萎缩亚型中黑质不同的空间转录组模式。
IF 5.7 2区 医学 Q1 NEUROSCIENCES Pub Date : 2025-11-04 DOI: 10.1186/s40478-025-02157-y
Jung Hwan Shin, Karoliina Eliisa Ruhno, Chaewon Shin, Hyun Je Kim, Soo Jeong Nam, Sun Ju Chung, Ji Hwan Moon, Han-Joon Kim
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引用次数: 0
Gene module-trait network analysis uncovers cell type specific systems and genes relevant to Alzheimer's Disease. 基因模块-性状网络分析揭示了与阿尔茨海默病相关的细胞类型特异性系统和基因。
IF 5.7 2区 医学 Q1 NEUROSCIENCES Pub Date : 2025-11-04 DOI: 10.1186/s40478-025-02143-4
Katia de Paiva Lopes, Ricardo A Vialle, Gilad Green, Masashi Fujita, Chris Gaiteri, Vilas Menon, Julie A Schneider, Yanling Wang, Philip L De Jager, Naomi Habib, Shinya Tasaki, David A Bennett

Alzheimer's Disease (AD) is marked by the accumulation of pathology, neuronal loss, and gliosis and frequently accompanied by decline in cognition. Understanding brain cell interactions is key to identifying new therapeutic targets to slow its progression. Here, we used systems biology methods to analyze single-nucleus RNA sequencing (snRNASeq) data generated from dorsolateral prefrontal cortex (DLPFC) tissues of 424 participants in the Religious Orders Study or the Rush Memory and Aging Project (ROSMAP). We identified modules of co-regulated genes in seven major cell types and assigned them to coherent cellular processes. We showed that coexpression structure was conserved in the majority of modules across cell types, but we also found distinct communities with altered connectivity, especially when compared to bulk RNASeq, suggesting cell-specific gene co-regulation. These coexpression modules can also capture signatures of cell subpopulations and be influenced by cell proportions. Finally, we performed associations of modules with AD traits such as amyloid-β deposition, tangle density, and cognitive decline, and showed replications in an independent single-nucleus dataset. Using a Bayesian network framework, we modeled the direction of relationships between the modules and AD progression. We highlight one key module, the astrocytic module 19 (ast_M19), associated with cognitive decline through a subpopulation of stress-response cells. Our work provides cell-specific molecular networks modeling the molecular events leading to AD.

阿尔茨海默病(AD)的特点是病理积累、神经元丧失和神经胶质瘤,并经常伴有认知能力下降。了解脑细胞之间的相互作用是确定新的治疗靶点以减缓其进展的关键。在这里,我们使用系统生物学方法分析了来自宗教秩序研究或拉什记忆与衰老项目(ROSMAP)的424名参与者背外侧前额叶皮层(DLPFC)组织的单核RNA测序(snRNASeq)数据。我们在7种主要细胞类型中鉴定了共调控基因模块,并将它们分配到连贯的细胞过程中。我们发现,共表达结构在大多数细胞类型的模块中是保守的,但我们也发现了具有改变连接的不同群落,特别是与大量RNASeq相比,这表明细胞特异性基因共调控。这些共表达模块还可以捕获细胞亚群的特征,并受细胞比例的影响。最后,我们将模块与AD特征(如淀粉样蛋白-β沉积、缠结密度和认知能力下降)进行了关联,并在独立的单核数据集中进行了重复。使用贝叶斯网络框架,我们对模块与AD进展之间的关系方向进行了建模。我们强调了一个关键模块,星形细胞模块19 (ast_M19),通过应激反应细胞亚群与认知能力下降相关。我们的工作提供了细胞特异性分子网络模拟导致AD的分子事件。
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引用次数: 0
Transaldolase 1 impacts Parkinson's disease pathogenesis via metabolic reprogramming and autophagy-lysosomal pathway. 转醛缩酶1通过代谢重编程和自噬-溶酶体途径影响帕金森病的发病机制。
IF 5.7 2区 医学 Q1 NEUROSCIENCES Pub Date : 2025-11-04 DOI: 10.1186/s40478-025-02133-6
Zixin Tan, Huimin Hu, Hao Chen, Yuwan Lin, Miaomiao Zhou, Wenlong Zhang, Pingyi Xu, Xiang Chen

Parkinson's disease (PD) progression involves dopaminergic neurodegeneration and pathological α-synuclein aggregation, processes linked to metabolic dysregulation and autophagy-lysosomal pathway (ALP) impairment. Transaldolase1 (TAL1) is a key enzyme of the pentose phosphate pathway. While elevated TAL1 protein levels have been observed in postmortem substantia nigra of PD patients, the enzyme's functional role in disease pathogenesis remains undefined. In this study, we explored the role of TAL1 in PD-related pathologies using MPTP-induced and AAV-A53T mouse models. We demonstrate that TAL1 upregulation is associated with dopaminergic neuron degeneration across both experimental models. TAL1 knockdown activated TFEB-mediated transcription of autophagy-lysosomal genes (Ctsb, Ctsd, Lamp1, Becn1, and Map1Lc3b). In addition, targeted metabolomics revealed that TAL1 knockdown modulates the energy pathways, especially in the TCA cycle, and glycolysis. The neuroprotective effects were mediated through AMPK/mTORC1 pathway activation, evidenced by increased AMP levels, p-AMPK/AMPK ratios, and downstream ALP enhancement. Importantly, TAL1 inhibition improved locomotor function in AAV-A53T mice and normalized stride length in footprint analysis. Pathological experiments confirmed reduced phospho-α-synuclein level and preserved the neuron loss in substantia nigra. Our findings highlight TAL1 as a regulator of autophagy-lysosomal function and energy metabolism in PD-related experimental models, where its inhibition restores the degradation of α-synuclein through coordinated activation of autophagy-lysosomal clearance and energetic reprogramming. These results suggest that targeting TAL1 may offer a potential therapeutic approach to mitigate PD-associated neuropathology.

帕金森病(PD)的进展涉及多巴胺能神经变性和病理性α-突触核蛋白聚集,这一过程与代谢失调和自噬-溶酶体途径(ALP)损伤有关。转醛脲酶1 (TAL1)是戊糖磷酸途径的关键酶。虽然在PD患者死后的黑质中观察到TAL1蛋白水平升高,但该酶在疾病发病机制中的功能作用仍不清楚。在本研究中,我们通过mptp诱导和AAV-A53T小鼠模型探讨了TAL1在pd相关病理中的作用。我们证明TAL1上调与多巴胺能神经元变性有关。TAL1敲低激活了tfeb介导的自噬溶酶体基因(Ctsb、Ctsd、Lamp1、Becn1和Map1Lc3b)的转录。此外,靶向代谢组学显示,TAL1敲低可调节能量通路,特别是在TCA循环和糖酵解中。神经保护作用是通过AMPK/mTORC1通路激活介导的,AMP水平升高,p-AMPK/AMPK比值升高,下游ALP增强。重要的是,TAL1抑制改善了AAV-A53T小鼠的运动功能,并在足迹分析中标准化了步长。病理实验证实,大鼠黑质磷酸化α-突触核蛋白水平降低,神经元损失得以保留。我们的研究结果强调了TAL1在pd相关实验模型中作为自噬-溶酶体功能和能量代谢的调节因子,其抑制作用通过协调激活自噬-溶酶体清除和能量重编程来恢复α-突触核蛋白的降解。这些结果表明,靶向TAL1可能提供一种潜在的治疗方法来减轻pd相关的神经病理学。
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Acta Neuropathologica Communications
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