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Morphology of the extraocular muscles (m. bulbi) in the pre-hatchling and post-hatchling african black ostriches (struthio camelus domesticus L., 1758) (Aves: Struthioniformes). 非洲黑鸵鸟(struthio camelus domesticus L., 1758)的眼外肌形态学研究(鸟类:Struthioniformes)。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-03-01 DOI: 10.1556/018.68.2018.1.4
Joanna Klećkowska-Nawrot, Karolina Goździewska-Harłajczuk, Karolina Barszcz, Maciej Janeczek

The aim of the study was to describe the morphology and the development of the extraocular muscles (EOMs) in the pre-hatchling and post-hatchling African black ostrich. The study involved 50 birds aged between 28 days and 3 years. The EOMs were analyzed morphologically with respect to the location and length of the straight and oblique muscles and the third eyelid muscles, the length and breadth of their tendons as well as the distance and shape of the muscle tendon insertions at the corneal limbus. A histological and histometric analysis were also carried out. The greatest increase in the length of the EOMs was noted in groups III-V. A marked increase in the length of the tendons of the dorsal straight muscle was found in groups II and III, in the tendons of the nasal straight muscle in groups IV and V, in the tendons of the dorsal oblique muscle in groups III to V and in the tendons of the ventral oblique muscle in groups IV and V. There was a significant increase in the breadth of the dorsal straight and ventral oblique muscle tendons in groups IV and V and the tendons of the pyramidal muscle in groups III and V. The distance of the distal insertion of the tendon at the corneal limbus increased steadily with age in all the examined groups. The number of fascicles and muscle fibres, their diameter and length in all the studied EOMs were different in the different groups.

本研究的目的是描述非洲黑鸵鸟在孵化前和孵化后眼外肌(EOMs)的形态和发育。这项研究涉及50只年龄在28天到3岁之间的鸟类。从形态学上分析了直肌、斜肌和第三眼睑肌的位置和长度,它们的肌腱的长度和宽度,以及角膜边缘肌肉肌腱插入的距离和形状。组织学和组织计量学分析也进行了。在第三至第五组中,EOMs的长度增加最多。II组和III组鼻直肌肌腱长度明显增加,IV组和V组鼻直肌肌腱长度明显增加。背侧斜肌的肌腱组三世V和腹斜肌的肌腱组IV和V有显著增加的宽度直接背侧和腹斜肌肌腱组第四章和第五章和锥体肌肉的肌腱组织III和V的距离远端插入肌腱的角膜缘与年龄的所有检查集团稳步增长。不同组的肌束和肌纤维数量、直径和长度不同。
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引用次数: 1
Intrathalamic connections shape spindle activity - a modelling study. 丘脑内连接影响纺锤体活动-一项模型研究。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-03-01 DOI: 10.1556/018.68.2018.1.2
Bálint Bús, Károly Antal, Zsuzsa Emri

Spindle oscillations are generated predominantly during sleep state II, through cyclical interactions between thalamocortical and reticular neurons. Inhibition from reticular cells is critical for this activity; it enables burst firing by the de-inactivation of T-type Ca2+ channels. While the effect of different channelopathies on spindling is extensively investigated, our knowledge about the role of intrathalamic connections is limited. Therefore, we explored how the connection pattern and the density of reticular inhibitory synapses affect spindle activity in a thalamic network model. With more intrareticular connections, synchronous firing of reticular cells, and intraspindle burst frequency decreased, spindles lengthened. In models with strong intrareticular inhibition spindle activity was impaired, and a sustained 6-8 Hz oscillation was generated instead. The strength of reticular innervation onto thalamocortical cells played a key role in the generation of oscillations; it determined the amount of thalamocortical cell bursts, and consequently spindle length. Focal inputs supported bursts but affected only a few cells thus barely reinforced network activity, while diffuse contacts aided bursts only when a sufficient number of reticular cells fired synchronously. According to our study, alterations in the connection pattern influence thalamic activities and may contribute to pathological conditions, or alternatively, they serve as a compensatory mechanism.

纺锤波振荡主要在睡眠状态II中产生,通过丘脑皮层和网状神经元之间的周期性相互作用。网状细胞的抑制对这种活动至关重要;它通过t型Ca2+通道的失活来实现突发放电。虽然不同的通道病变对纺锤体的影响被广泛研究,但我们对丘脑内连接的作用的了解有限。因此,我们在丘脑网络模型中探讨了网状抑制性突触的连接模式和密度如何影响纺锤体活动。随着胞内连接增多,网状细胞同步放电,纺锤波内爆发频率降低,纺锤波变长。在具有强烈网格内抑制的模型中,纺锤体活性受损,取而代之的是持续的6-8 Hz振荡。网状神经支配对丘脑皮质细胞的强度在振荡的产生中起关键作用;它决定了丘脑皮层细胞爆发的数量,从而决定了纺锤体的长度。聚焦输入支持脉冲,但只影响少数细胞,因此几乎没有增强网络活动,而漫射接触只有在足够数量的网状细胞同步发射时才有助于脉冲。根据我们的研究,连接模式的改变会影响丘脑活动,并可能导致病理状况,或者它们作为一种补偿机制。
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引用次数: 4
Smallest lectin-like peptide identified from the skin secretion of an endemic frog, Hydrophylax bahuvistara. 从一种地方性蛙的皮肤分泌物中鉴定出的最小的凝集素样肽。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-03-01 DOI: 10.1556/018.68.2018.1.9
Thundiparampil Vasanth Vineethkumar, Gopal Shyla, Sanil George

Lectins are sugar-binding proteins and considered as attractive candidates for drug delivery and targeting. Here, we report the identification of the smallest lectin-like peptide (odorranalectin HYba) from the skin secretion of Hydrophylax bahuvistara which is being the shortest lectin-like peptide identified so far from the frog skin secretion, with 15 amino acid residues. The peptide is the first report from an Indian frog and lacks antimicrobial activity but strongly agglutinate intact human erythrocytes. The sequences at the L-fucose recognizing region is conserved as in other lectins reported from frog skin secretion and could be exploited for specificity and drug targeting properties.

凝集素是一种糖结合蛋白,被认为是药物传递和靶向的有吸引力的候选者。在这里,我们报道了从巴huvistara Hydrophylax bahuvistara皮肤分泌物中鉴定出最小的凝集素样肽(odorranalectin HYba),这是迄今为止从青蛙皮肤分泌物中鉴定出的最短的凝集素样肽,有15个氨基酸残基。这是印度青蛙首次报道的肽,缺乏抗菌活性,但能强烈凝集完整的人类红细胞。L-聚焦识别区的序列与其他从青蛙皮肤分泌物中报道的凝集素一样是保守的,可以用于特异性和药物靶向性。
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引用次数: 1
Factors affecting synonymous codon usage of housekeeping genes in Drosophila melanogaster. 影响黑腹果蝇内务基因同义密码子使用的因素。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-03-01 DOI: 10.1556/018.68.2018.1.5
Yi Wen Lu, Tai Sheng Chiu

Housekeeping genes (HK genes) are required for cell survival and the maintenance of basic cellular functions. The investigation of factors affecting codon usage patterns in HK genes of insects can help in understanding the molecular evolution of insects and aid the development of insect pest management strategies. In this study, we employed bioinformatics approaches to analyze the codon usage bias (CUB) of HK genes in the insect model organism, Drosophila melanogaster. A comparison of CUB between 1107 HK genes and 1084 high tissue specificity genes suggested that HK genes have higher CUB in D. melanogaster. In addition, we found that CUB inversely correlates with the non-synonymous substitution rate of HK genes. Therefore, we attempted to identify the factors that potentially influence the codon usage pattern of HK genes. Our results suggest that mutation pressure and natural selection highly correlate with CUB in the HK genes of D. melanogaster and that two topological properties of HK proteins (proportion of protein interacting length and protein connectivity) also correlate with CUB in the HK genes of D. melanogaster. This study provides insight into CUB in the HK genes of D. melanogaster, and the results can support future investigations of potential applications in agricultural and biomedical field.

管家基因(HK基因)是细胞生存和维持基本细胞功能所必需的。研究昆虫HK基因密码子使用模式的影响因素,有助于了解昆虫的分子进化和制定害虫防治策略。本研究采用生物信息学方法分析了昆虫模式生物黑腹果蝇HK基因的密码子使用偏差(CUB)。通过对1107个HK基因与1084个高组织特异性基因的CUB比较,发现HK基因在黑腹龙骨中具有更高的CUB。此外,我们发现CUB与HK基因的非同义替代率呈负相关。因此,我们试图找出可能影响HK基因密码子使用模式的因素。结果表明,突变压力和自然选择与黑腹龙HK基因的CUB高度相关,HK蛋白的两个拓扑特性(蛋白质相互作用长度比例和蛋白质连通性)也与黑腹龙HK基因的CUB相关。本研究为黑腹龙HK基因中的CUB提供了新的思路,为进一步研究其在农业和生物医学领域的潜在应用提供了依据。
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引用次数: 0
Cinnamic acid and fish flour affect wheat phenolic acids and flavonoid compounds, lipid peroxidation, proline levels under salt stress. 肉桂酸和鱼粉对盐胁迫下小麦酚酸和类黄酮化合物、脂质过氧化和脯氨酸水平有影响。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-12-01 DOI: 10.1556/018.68.2017.4.5
Bergüzar Karadağ, Nilgün Candan Yücel

To elucidate the physiological mechanism of salt stress mitigated by cinnamic acid (CA) and fish flour (FF) pretreatment, wheat was pretreated with 20, 50 and 100 ppm CA and 1 g/10 mL FF for 2 d and was then cultivated. We investigated whether exogenous CA + FF could protect wheat from salt stress and examined whether the protective effect was associated with the regulation of seed vigor, antioxidant defense systems, phenolic biosynthesis and lipid peroxidation. At 2 days exogenous CA did not influence seed vigor. Salt stress increased the phenolic biosynthesis, but the CA + FF-combined pretreatment enhanced the phenolic biosynthesis even more under salt stress and decreased lipid peroxidation to some extent, enhancing the tolerance of wheat to salt stress.

为了阐明肉桂酸和鱼粉预处理缓解盐胁迫的生理机制,以20、50和100 ppm的CA和1 g/10 mL的FF预处理小麦2 d,然后进行培养。我们研究了外源CA + FF是否能保护小麦免受盐胁迫,并研究了这种保护作用是否与种子活力、抗氧化防御系统、酚类生物合成和脂质过氧化的调节有关。在第2天,外源CA对种子活力没有影响。盐胁迫增加了酚类生物合成,但CA + ff复合预处理在盐胁迫下更能促进酚类生物合成,并在一定程度上降低脂质过氧化,增强了小麦对盐胁迫的耐受性。
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引用次数: 3
Chemical composition and antimicrobial activity of the commercial Origanum onites L. oil against nosocomial carbapenem resistant extended spectrum beta lactamase producer Escherichia coli isolates. 商品牛头草油对医院耐碳青霉烯类广谱β -内酰胺酶产生菌大肠杆菌的化学成分及抑菌活性研究
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-12-01 DOI: 10.1556/018.68.2017.4.11
Banu Kaskatepe, Serap Suzuk Yildiz, Merve Eylul Kiymaci, Ayse Nur Yazgan, Salih Cesur, Sinem Aslan Erdem

In recent years rapidly growing antibiotic resistance has increased interest toward natural products, especially essential oils because of their various effects. The aim of this study was to identify the chemical composition of the commercial Origanum onites essential oil (EO) and to investigate the antimicrobial activity by disc diffusion and dilution methods, against ten different ATCC strains, including eight bacteria, two yeasts and seventy-nine clinical nosocomial Escherichia coli isolates that produce extended spectrum beta lactamase (ESBL). The chemical composition of EO was analyzed by GC and GC-MS. The major compounds of the EO were determined as carvacrol (51.4%) followed by linalool (11.2%), p-cymene (8.9%) and γ-terpinene (6.7%). O. onites EO had antimicrobial activity against all standard strains and inhibited microbial growth of ESBL positive E. coli isolates. According to our results, O. onites EO may be an alternative to synthetic drug, used in combination with other antibiotics for treatment of infection caused by multidrug resistant bacteria after testing toxic effects and irritation at preferred doses on human.

近年来,快速增长的抗生素耐药性增加了对天然产品的兴趣,特别是精油,因为它们的各种作用。本研究的目的是鉴定商业牛头草精油(EO)的化学成分,并通过碟扩散和稀释法研究其对10种不同的ATCC菌株的抑菌活性,其中包括8种细菌、2种酵母和79种临床医院分离的产生广谱β -内酰胺酶(ESBL)的大肠杆菌。用气相色谱和气相色谱-质谱分析了EO的化学成分。其主要成分为香芹酚(51.4%)、芳樟醇(11.2%)、对伞花烃(8.9%)和γ-萜烯(6.7%)。O. onites EO对所有标准菌株均有抑菌活性,并能抑制ESBL阳性大肠杆菌分离株的微生物生长。根据我们的研究结果,通过对人体的毒性作用和首选剂量的刺激试验,onites EO可能是合成药物的替代品,与其他抗生素联合用于治疗多重耐药细菌引起的感染。
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引用次数: 13
Hydrogen peroxide prolongs mitotic arrest in a dose dependent manner and independently of the spindle assembly checkpoint activity in Saccharomyces cerevisiae. 过氧化氢以剂量依赖的方式延长有丝分裂阻滞,独立于酿酒酵母的纺锤体组装检查点活性。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-12-01 DOI: 10.1556/018.68.2017.4.12
Pinar Buket Atalay, Oyku Asci, Fatih Oner Kaya, Bilge Guvenc Tuna

Oxidative stress and chromosome missegregation are important factors that are linked to aneuploidy. A major reason for chromosome missegragation is the inappropriate activity of the spindle assembly checkpoint (SAC), a conserved surveillance mechanism that monitors the state of kinetochore-microtubule attachments to ensure equal chromosome segregation in mitosis. SAC-activation induces a prolonged mitotic arrest. Mitosis is considered the most vulnerable cell cycle phase to several external signals, therefore increasing the time cells spent in this phase via mitotic arrest induction by SAC-activating agents is favorable for cancer therapy. Cancer cells also display elevated oxidative stress due to abnormally high production of reactive oxygen species (ROS). However, the effect of increased oxidative stress on the duration of mitotic arrest remains largely unknown. In this study, we investigated the effect of H2O2-induced oxidative stress on the mitotic arrest induced by a SAC-activating agent (nocodazole) in Saccharomyces cerevisiae. Our data suggest that oxidative stress prolongs SAC-activation induced mitotic arrest in a dose dependent manner. We, in addition, investigated the effect of H2O2 treatment on the mitotic arrest induced independently of SAC-activation by using a conditional mutant (cdc23) and showed that the effect of H2O2-induced oxidative stress on mitotic arrest is independent of the SAC activity.

氧化应激和染色体错分离是导致非整倍体的重要因素。染色体错误分离的一个主要原因是纺锤体组装检查点(SAC)的不适当活动,这是一种保守的监视机制,用于监测着丝点-微管附着的状态,以确保有丝分裂中染色体的平等分离。sacc活化诱导有丝分裂停止时间延长。有丝分裂被认为是最易受外部信号影响的细胞周期阶段,因此,通过sac活化剂诱导有丝分裂阻滞来增加细胞在这一阶段的时间有利于癌症治疗。由于活性氧(ROS)的异常高产量,癌细胞也表现出氧化应激升高。然而,氧化应激增加对有丝分裂停止持续时间的影响在很大程度上仍然未知。在这项研究中,我们研究了h2o2诱导的氧化应激对sacc活化剂(nocodazole)诱导的酿酒酵母有丝分裂阻滞的影响。我们的数据表明,氧化应激以剂量依赖的方式延长了sac活化诱导的有丝分裂停止。此外,我们利用条件突变体(cdc23)研究了H2O2处理对独立于SAC活化诱导的有丝分裂停滞的影响,并表明H2O2诱导的氧化应激对有丝分裂停滞的影响与SAC活性无关。
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引用次数: 7
In silico characterisation of novel rice transcripts differentially expressed in phosphorus dificient conditions suggests a role of these transcripts in multiple abiotic stresses. 在硅片上,在缺磷条件下差异表达的新型水稻转录物的特征表明,这些转录物在多种非生物胁迫中起作用。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-12-01 DOI: 10.1556/018.68.2017.4.6
Julia S Yumnam, Mayank Rai, Wricha Tyagi

Phosphorus deficiency adversely affects crop productivity. The mechanism of tolerance in plants is not well understood. The current study successfully annotated a set of highly significant (Log2 RPKM ≥3) nine novel sequences up-regulated in P deficient condition identified from a low P tolerant rice genotype. Sequence annotation identified two transcripts (Os01g37260 and Os02g11060) carrying known domains, F-box and WD, respectively. Multiple Expectation maximization for Motif Elicitation (MEME) revealed presence of conserved domains like D[LP][HY][CL]D[CM][DT]C[AP][DQ][IQ]C, [EH][DN]HN[HS] [ER][FY][EP]I[HN]H which might play a role in phosphorus deficiency tolerance. Analysis of the upstream regions indicated presence of stress responsive elements like E Box, ABRE, and MYBCORE suggesting regulation of the novel transcripts by DNA binding. Protein localization prediction tool suggests that these novel proteins might be targeted to nucleus, chloroplast and cell wall. Transcripts Os02g03640 and Os02g10250 revealed potential target sites for microRNA binding suggesting role of novel miRNAs in low phosphorus response. Our analysis suggests that an F-box protein, Os01g37260 (OSFBx14) might be a promising candidate gene playing a role in multiple abiotic stresses including P deficiency.

缺磷对作物产量有不利影响。植物的耐受性机制尚不清楚。本研究成功标注了一组高显著性(Log2 RPKM≥3)的耐低磷水稻基因型在缺磷条件下上调的9个新序列。序列注释鉴定出两个转录本(Os01g37260和Os02g11060)分别携带已知结构域F-box和WD。多期望最大化Motif Elicitation (Multiple Expectation maximitation, MEME)揭示了D[LP][HY][CL]D[CM][DT]C[AP][DQ][IQ]C, [EH][DN]HN[HS] [ER][FY][EP]I[HN]H等保守结构域的存在。对上游区域的分析表明,存在E Box、ABRE和MYBCORE等应激响应元件,表明新的转录本通过DNA结合进行调控。蛋白质定位预测工具提示这些新蛋白可能靶向细胞核、叶绿体和细胞壁。转录本Os02g03640和Os02g10250揭示了microRNA结合的潜在靶点,提示新型mirna在低磷响应中的作用。我们的分析表明,F-box蛋白Os01g37260 (OSFBx14)可能是一个有希望的候选基因,在包括缺磷在内的多种非生物胁迫中发挥作用。
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引用次数: 2
Acetaldehyde suppresses growth, changes conidia morphology and reduces the production of adenosine 3',5'-cyclic monophosphate in a dose dependent manner in Alternaria alternata. 乙醛抑制交替孢生长,改变分生孢子形态,并以剂量依赖的方式减少3',5'-环单磷酸腺苷的产生。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-12-01 DOI: 10.1556/018.68.2017.4.13
Mivuyo S Mbovane, Venkata S R Gangireddygari, Hlengilizwe Nyoni, Khayalethu Ntushelo

One-day-old cultures of the plant pathogenic fungus Alternaria alternata were exposed to 0%, 5% and 10% acetaldehyde mixed with distilled water. Fungal growth data showed that, overall, the 5% and the 10% acetaldehyde treatments significantly inhibited the growth of A. alternata, and that acetyldehyde also facilitated maturity and multicellularity of fungal conidia. The increase of the acetyldehyde dose also caused correlated decrease of adenosine 3',5'-cyclic monophosphate produced by A. alternata.

用0%、5%和10%的乙醛与蒸馏水混合,对1日龄的植物病原菌交替菌(Alternaria alternata)进行培养。真菌生长数据表明,总体而言,5%和10%的乙醛处理显著抑制了交替孢的生长,乙醛还促进了真菌分生孢子的成熟和多细胞化。乙醛剂量的增加也会导致交替蒿产生的3′,5′-环单磷酸腺苷相应减少。
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引用次数: 0
Salinity tolerance of grafted watermelon seedlings. 西瓜嫁接苗耐盐性的研究。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2017-12-01 DOI: 10.1556/018.68.2017.4.7
Viktória Bőhm, Dávid Fekete, Gábor Balázs, László Gáspár, Noémi Kappel

In order to evaluate the salinity tolerance of grafted watermelon, two sets of experiments were conducted in a growing chamber where 'Esmeralda' varieties were grafted onto interspecific squash (Cucurbita maxima Duch. × Cucurbita moschata Duch.) and Lagenaria siceraria rootstocks. Both non-grafted and self-garfted plants were used for control. For salt stress, 2.85 and 4.28 mM/l substrate doses of NaCl were added with each irrigation in 2 day intervals for a duration of 23 days. Interspecific-grafted plants showed the highest salinity tolerance as plant biomass and leaf area were not decreased but improved by salinity in most cases. Furthermore, transpiration and photosynthesis activity did not decrease as much as it did in the case of other grafting combinations. Interspecific and Lagenaria rootstocks showed sodium retention, as elevation of Na+ content in the leaves of these grafting combinations was negligible compared to self-grafted and non-grafted ones. Presumably abiotic stress tolerance can be enhanced by grafting per se considering measured parameters of self-grafted plants did not decrease as much as seen in non-grafted ones.

为了评价嫁接西瓜的耐盐性,将‘Esmeralda’品种嫁接到种间南瓜(Cucurbita maxima Duch)上,在生长室内进行了两组试验。×葫芦(Cucurbita moschata Duch.)和木兰花(Lagenaria siceraria)砧木。采用非嫁接和自嫁接植株作为对照。对于盐胁迫,每次灌施2.85和4.28 mM/l的底物NaCl,间隔2 d,持续23 d。不同种间嫁接植株的耐盐性最高,在大多数情况下,盐度对植株生物量和叶面积的影响不减反增。此外,蒸腾和光合活性的下降幅度也没有其他嫁接组合大。与自嫁接和未嫁接相比,这些嫁接组合的叶片中Na+含量的升高可以忽略不计。考虑到自嫁接植株的测量参数并没有像非嫁接植株那样降低那么多,推测嫁接本身可以增强非生物抗逆性。
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引用次数: 6
期刊
Acta Biologica Hungarica
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