Pub Date : 2025-01-01DOI: 10.1107/S2053229624011549
Jarosław Sukiennik, Andrzej Olczak, Katarzyna Gobis, Izabela Korona-Głowniak, Katarzyna Suśniak, Andrzej Fruziński, Małgorzata Szczesio
Three new thiosemicarbazide derivatives are described in terms of synthesis, structure and biological activity. N'-(Morpholine-4-carbonothioyl)-4-(4-phenylpiperazin-1-yl)picolinohydrazonamide 2-methyltetrahydrofuran hemisolvate, 2C21H27N7OS·C5H10O, 1, determined at 100 K, has orthorhombic (Pca21) symmetry and exhibits disorder. 4-(4-Phenylpiperazin-1-yl)-N'-(piperidine-1-carbonothioyl)picolinohydrazonamide-dimethylformamide-water (1/1/0.285), C22H29N7S·C3H7NO·0.285H2O, 2, determined at 100 K, has monoclinic (P21/c) symmetry. 4-(4-Phenylpiperazin-1-yl)-N'-(pyrrolidine-1-carbonothioyl)picolinohydrazonamide, C21H27N7S, 3, determined at 100 K, has triclinic (P1) symmetry and exhibits disorder. Compounds 1 and 2 contain solvent molecules in their structure. All three studied compounds adopt the zwitterionic form and were tested for their microbiological activity on a model panel of Gram-positive and Gram-negative bacteria, as well as selected yeasts.
介绍了三种新的硫代氨基脲衍生物的合成、结构和生物活性。N′-(4-羰基)-4-(4-苯基哌嗪-1-基)picolinohydrazonamide 2-甲基四氢呋喃半磺酸盐,2C21H27N7OS·c5h100o, 1,在100 K下测定,具有正构对称(Pca21)和无序性。4-(4-苯基哌嗪-1-酰基)- n '-(哌啶-1-羰基)吡啶酰肼酰胺-二甲基甲酰胺-水(1/1/0.285),C22H29N7S·C3H7NO·0.285H2O, 2,在100 K下测定,具有单斜(P21/c)对称性。4-(4-苯基哌嗪-1-基)- n '-(吡咯烷-1-羰基)picolinohydrazonamide, C21H27N7S, 3,在100 K下测定,具有三斜(P1)对称性和无序性。化合物1和2的结构中含有溶剂分子。所有三种被研究的化合物都采用两性离子形式,并在革兰氏阳性和革兰氏阴性细菌模型面板以及选定的酵母上测试了它们的微生物活性。
{"title":"Synthesis, structure and biological activity of new picolinohydrazonamide derivatives.","authors":"Jarosław Sukiennik, Andrzej Olczak, Katarzyna Gobis, Izabela Korona-Głowniak, Katarzyna Suśniak, Andrzej Fruziński, Małgorzata Szczesio","doi":"10.1107/S2053229624011549","DOIUrl":"10.1107/S2053229624011549","url":null,"abstract":"<p><p>Three new thiosemicarbazide derivatives are described in terms of synthesis, structure and biological activity. N'-(Morpholine-4-carbonothioyl)-4-(4-phenylpiperazin-1-yl)picolinohydrazonamide 2-methyltetrahydrofuran hemisolvate, 2C<sub>21</sub>H<sub>27</sub>N<sub>7</sub>OS·C<sub>5</sub>H<sub>10</sub>O, 1, determined at 100 K, has orthorhombic (Pca2<sub>1</sub>) symmetry and exhibits disorder. 4-(4-Phenylpiperazin-1-yl)-N'-(piperidine-1-carbonothioyl)picolinohydrazonamide-dimethylformamide-water (1/1/0.285), C<sub>22</sub>H<sub>29</sub>N<sub>7</sub>S·C<sub>3</sub>H<sub>7</sub>NO·0.285H<sub>2</sub>O, 2, determined at 100 K, has monoclinic (P2<sub>1</sub>/c) symmetry. 4-(4-Phenylpiperazin-1-yl)-N'-(pyrrolidine-1-carbonothioyl)picolinohydrazonamide, C<sub>21</sub>H<sub>27</sub>N<sub>7</sub>S, 3, determined at 100 K, has triclinic (P1) symmetry and exhibits disorder. Compounds 1 and 2 contain solvent molecules in their structure. All three studied compounds adopt the zwitterionic form and were tested for their microbiological activity on a model panel of Gram-positive and Gram-negative bacteria, as well as selected yeasts.</p>","PeriodicalId":7115,"journal":{"name":"Acta Crystallographica Section C Structural Chemistry","volume":" ","pages":"22-30"},"PeriodicalIF":0.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142783674","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01DOI: 10.1107/S2053229624011872
Yao Zhang, Yan Juan Wang, Yuan Yuan Tang, Xiao Gang Chen
In recent years, molecular-based ferroelectric materials have attracted widespread research interest due to their excellent performance. Among them, host-guest-type crown ether inclusion compounds composed of organic ammonium cations, crown ether molecules and corresponding anions have become a star component in the design of molecular-based ferroelectric materials because they are prone to order-disorder phase transitions. Many anions have been studied extensively as counter-ions, such as bis(trifluoromethanesulfonyl)amidate (TFSA-), PF6- and [FeCl4]-. However, crown ether inclusion compounds with di(methanesulfonyl)amidate (DMSA) as the anion have been rarely investigated. Here, we converted TFSA to DMSA to obtain 3,4-difluoroanilinium di(methanesulfonyl)amidate-18-crown-6 (1/1), C6H6F2N+·C2H6NO4S2-·C12H24O6 or [(3,4-DFA)(18-crown-6)][DMSA]. At both 100 and 300 K, the crystal falls into the space group P21/c. The 3,4-DFA cation forms three well-defined N-H...O hydrogen bonds, positioned at the perching position of the crown ether ring. In contrast to the distinct packing configuration observed in the [(3,4-DFA)(18-crown-6)][TFSA] crystals, where TFSA exhibits a disordered structure, the [(3,4-DFA)(18-crown-6)][DMSA] complex features a staggered arrangement, with DMSA existing in an ordered fashion.
{"title":"Crown ether inclusion compound 3,4-difluoroanilinium di(methanesulfonyl)amidate-18-crown-6 (1/1) clathrate.","authors":"Yao Zhang, Yan Juan Wang, Yuan Yuan Tang, Xiao Gang Chen","doi":"10.1107/S2053229624011872","DOIUrl":"10.1107/S2053229624011872","url":null,"abstract":"<p><p>In recent years, molecular-based ferroelectric materials have attracted widespread research interest due to their excellent performance. Among them, host-guest-type crown ether inclusion compounds composed of organic ammonium cations, crown ether molecules and corresponding anions have become a star component in the design of molecular-based ferroelectric materials because they are prone to order-disorder phase transitions. Many anions have been studied extensively as counter-ions, such as bis(trifluoromethanesulfonyl)amidate (TFSA<sup>-</sup>), PF<sub>6</sub><sup>-</sup> and [FeCl<sub>4</sub>]<sup>-</sup>. However, crown ether inclusion compounds with di(methanesulfonyl)amidate (DMSA) as the anion have been rarely investigated. Here, we converted TFSA to DMSA to obtain 3,4-difluoroanilinium di(methanesulfonyl)amidate-18-crown-6 (1/1), C<sub>6</sub>H<sub>6</sub>F<sub>2</sub>N<sup>+</sup>·C<sub>2</sub>H<sub>6</sub>NO<sub>4</sub>S<sub>2</sub><sup>-</sup>·C<sub>12</sub>H<sub>24</sub>O<sub>6</sub> or [(3,4-DFA)(18-crown-6)][DMSA]. At both 100 and 300 K, the crystal falls into the space group P2<sub>1</sub>/c. The 3,4-DFA cation forms three well-defined N-H...O hydrogen bonds, positioned at the perching position of the crown ether ring. In contrast to the distinct packing configuration observed in the [(3,4-DFA)(18-crown-6)][TFSA] crystals, where TFSA exhibits a disordered structure, the [(3,4-DFA)(18-crown-6)][DMSA] complex features a staggered arrangement, with DMSA existing in an ordered fashion.</p>","PeriodicalId":7115,"journal":{"name":"Acta Crystallographica Section C Structural Chemistry","volume":" ","pages":"38-42"},"PeriodicalIF":0.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142833421","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01DOI: 10.1107/S205322962401235X
Xin Yi Zhao, Hai Yan Yu, Hong Tao Zhang
A new twofold interpenetrated 3D metal-organic framework (MOF), namely, poly[[μ-aqua-diaqua{μ4-2,2'-[terephthaloylbis(azanediyl)]diacetato}barium(II)] dihydrate], {[Ba(C12H10N2O6)(H2O)3]·2H2O}n, (I), has been assembled through a combination of the reaction of 2,2'-[terephthaloylbis(azanediyl)]diacetic acid (TPBA, H2L) with barium hydroxide and crystallization at low temperature. In the crystal structure of (I), the nine-coordinated BaII ions are bridged by two μ2-aqua ligands and two carboxylate μ2-O atoms to form a 1D loop-like Ba-O chain, which, together with the other two coordinated water molecules and μ2-carboxylate groups, produces a rod-like secondary building unit (SBU). The resultant 1D polynuclear SBUs are further extended into a 3D MOF via the terephthalamide moiety of the ligand as a spacer. Two intramolecular dihydrogen bonds (DHBs) between the imine H atoms and the arene H atoms contribute to maintaining the 3D structure. In the crystal, two independent MOFs interpenetrate each other, thereby producing a twofold interpenetrated 3D architecture with a 4-connected PtS-X topology. Intermolecular hydrogen bonding and π-π interactions contribute to the stability of the twofold interpenetrated 3D architecture. The noncovalent interactions in the coordination polymer (CP) were further investigated by Hirshfeld surface analysis and the results show that the prominent interactions are H...O (39.6%) and H...H (34.4%), as well as Ba...O (9.8%), contacts. The 3D CP (I) exhibits a fluorescence emission with a quantum yield of 0.134.
{"title":"A twofold interpenetrated three-dimensional barium(II) metal-organic framework constructed from 2,2'-[terephthaloylbis(azanediyl)]diacetate: synthesis, structure, dihydrogen bonding and spectroscopic properties.","authors":"Xin Yi Zhao, Hai Yan Yu, Hong Tao Zhang","doi":"10.1107/S205322962401235X","DOIUrl":"https://doi.org/10.1107/S205322962401235X","url":null,"abstract":"<p><p>A new twofold interpenetrated 3D metal-organic framework (MOF), namely, poly[[μ-aqua-diaqua{μ<sub>4</sub>-2,2'-[terephthaloylbis(azanediyl)]diacetato}barium(II)] dihydrate], {[Ba(C<sub>12</sub>H<sub>10</sub>N<sub>2</sub>O<sub>6</sub>)(H<sub>2</sub>O)<sub>3</sub>]·2H<sub>2</sub>O}<sub>n</sub>, (I), has been assembled through a combination of the reaction of 2,2'-[terephthaloylbis(azanediyl)]diacetic acid (TPBA, H<sub>2</sub>L) with barium hydroxide and crystallization at low temperature. In the crystal structure of (I), the nine-coordinated Ba<sup>II</sup> ions are bridged by two μ<sub>2</sub>-aqua ligands and two carboxylate μ<sub>2</sub>-O atoms to form a 1D loop-like Ba-O chain, which, together with the other two coordinated water molecules and μ<sub>2</sub>-carboxylate groups, produces a rod-like secondary building unit (SBU). The resultant 1D polynuclear SBUs are further extended into a 3D MOF via the terephthalamide moiety of the ligand as a spacer. Two intramolecular dihydrogen bonds (DHBs) between the imine H atoms and the arene H atoms contribute to maintaining the 3D structure. In the crystal, two independent MOFs interpenetrate each other, thereby producing a twofold interpenetrated 3D architecture with a 4-connected PtS-X topology. Intermolecular hydrogen bonding and π-π interactions contribute to the stability of the twofold interpenetrated 3D architecture. The noncovalent interactions in the coordination polymer (CP) were further investigated by Hirshfeld surface analysis and the results show that the prominent interactions are H...O (39.6%) and H...H (34.4%), as well as Ba...O (9.8%), contacts. The 3D CP (I) exhibits a fluorescence emission with a quantum yield of 0.134.</p>","PeriodicalId":7115,"journal":{"name":"Acta Crystallographica Section C Structural Chemistry","volume":"81 Pt 1","pages":"43-53"},"PeriodicalIF":0.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142926276","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01DOI: 10.1107/S2053229624011495
Oscar Enrique Piro
Prompted by visionary political leaders and a flowering economy, the University of La Plata was founded in 1905, the third Argentinian university after the Universities of Cordoba (1613) and Buenos Aires (1821). Differing from the older universities, more prone to professional formation, the new university was oriented towards teaching and scientific research following western European academic tradition. Along with the university was created the Institute of Physics, the first of its kind in Latin America. To pursue the foundational plan, the university recruited distinguished German physicists, some of whom became the first directors. From the start, the institute became acquainted with Röntgen rays, their generation and use, initially for radiographic images and later in occasional diffraction studies. The first dedicated crystallographic X-ray diffraction laboratory was set up in the early 1970s, when it solved the first molecular structures. Soon the fascination brought about by a methodology that afforded the visualization of atoms, molecules and crystals lured the local and national physical chemistry communities. In close partnership with an equally oriented laboratory at the University of Sao Paulo, Brazil, and in collaboration with several physical chemistry laboratories from Argentina and the Latin American region, and also from Europe, we undertook studies on the crystal structures and physicochemical and spectroscopic properties of a wide range of materials, including inorganic, organic, bioinorganic, metal-organic, organic-metal, supramolecular, pharmaceutical, organic minerals and liquid crystals. The present essay is a personal account of the origin and development of structural X-ray crystallography at the University of La Plata and its impact on the scientific research of Argentina and Latin America.
{"title":"A personal account of the history of X-ray crystallography at the University of La Plata, Argentina.","authors":"Oscar Enrique Piro","doi":"10.1107/S2053229624011495","DOIUrl":"10.1107/S2053229624011495","url":null,"abstract":"<p><p>Prompted by visionary political leaders and a flowering economy, the University of La Plata was founded in 1905, the third Argentinian university after the Universities of Cordoba (1613) and Buenos Aires (1821). Differing from the older universities, more prone to professional formation, the new university was oriented towards teaching and scientific research following western European academic tradition. Along with the university was created the Institute of Physics, the first of its kind in Latin America. To pursue the foundational plan, the university recruited distinguished German physicists, some of whom became the first directors. From the start, the institute became acquainted with Röntgen rays, their generation and use, initially for radiographic images and later in occasional diffraction studies. The first dedicated crystallographic X-ray diffraction laboratory was set up in the early 1970s, when it solved the first molecular structures. Soon the fascination brought about by a methodology that afforded the visualization of atoms, molecules and crystals lured the local and national physical chemistry communities. In close partnership with an equally oriented laboratory at the University of Sao Paulo, Brazil, and in collaboration with several physical chemistry laboratories from Argentina and the Latin American region, and also from Europe, we undertook studies on the crystal structures and physicochemical and spectroscopic properties of a wide range of materials, including inorganic, organic, bioinorganic, metal-organic, organic-metal, supramolecular, pharmaceutical, organic minerals and liquid crystals. The present essay is a personal account of the origin and development of structural X-ray crystallography at the University of La Plata and its impact on the scientific research of Argentina and Latin America.</p>","PeriodicalId":7115,"journal":{"name":"Acta Crystallographica Section C Structural Chemistry","volume":" ","pages":"14-21"},"PeriodicalIF":0.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142783563","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-11-20DOI: 10.1107/S2053229624010489
Valentin Bockmair, Andreas Klöck, Dirk Hollenwäger, Andreas J Kornath
Taurine is part of the cysteine cycle and is one of the few naturally occuring organosulfur-based molecules in the human body. As implied by modern studies, protonated taurine is of biological impact. The first attempts to isolate its protonated species in the binary superacidic system HF/SbF5 were performed by Hopfinger, resulting in the isolation of monoprotonated taurine. Since the chosen conditions seemed rather harsh, investigations in less acidic systems were performed at room temperature to explore the involved protonated species. Herein, we present the structure of 2-[dihydroxy(oxo)sulfanyliumyl]ethanaminium bis[hexafluoridoarsenate(V)], [H2O3SC2H4NH3][AsF6]2, the diprotonated form of 2-aminoethanesulfonic acid (taurine). It was synthesized in the binary superacidic system HF/AsF5 and crystallizes as colourless needles. Diprotonated taurine was structurally characterized by single-crystal X-ray diffraction analysis, low-temperature vibrational spectroscopy and NMR spectroscopy.
牛磺酸是半胱氨酸循环的一部分,也是人体内为数不多的天然有机硫基分子之一。现代研究表明,质子化牛磺酸具有生物学影响。霍普芬格首次尝试在二元超酸性体系 HF/SbF5 中分离质子化牛磺酸,结果分离出了单质子化牛磺酸。由于所选条件似乎相当苛刻,因此我们在室温下对酸性较低的体系进行了研究,以探索其中的质子化物种。在此,我们展示了 2-[二羟基(氧代)硫铵基]乙铵双[六氟砷酸盐(V)],[H2O3SC2H4NH3][AsF6]2 的结构,它是 2-氨基乙磺酸(牛磺酸)的二质子化形式。它是在二元超酸性体系 HF/AsF5 中合成的,结晶为无色针状。通过单晶 X 射线衍射分析、低温振动光谱和核磁共振光谱,对二质子化牛磺酸进行了结构表征。
{"title":"Diprotonation of taurine: 2-[dihydroxy(oxo)sulfanyliumyl]ethanaminium bis[hexafluoroarsenate(V)].","authors":"Valentin Bockmair, Andreas Klöck, Dirk Hollenwäger, Andreas J Kornath","doi":"10.1107/S2053229624010489","DOIUrl":"10.1107/S2053229624010489","url":null,"abstract":"<p><p>Taurine is part of the cysteine cycle and is one of the few naturally occuring organosulfur-based molecules in the human body. As implied by modern studies, protonated taurine is of biological impact. The first attempts to isolate its protonated species in the binary superacidic system HF/SbF<sub>5</sub> were performed by Hopfinger, resulting in the isolation of monoprotonated taurine. Since the chosen conditions seemed rather harsh, investigations in less acidic systems were performed at room temperature to explore the involved protonated species. Herein, we present the structure of 2-[dihydroxy(oxo)sulfanyliumyl]ethanaminium bis[hexafluoridoarsenate(V)], [H<sub>2</sub>O<sub>3</sub>SC<sub>2</sub>H<sub>4</sub>NH<sub>3</sub>][AsF<sub>6</sub>]<sub>2</sub>, the diprotonated form of 2-aminoethanesulfonic acid (taurine). It was synthesized in the binary superacidic system HF/AsF<sub>5</sub> and crystallizes as colourless needles. Diprotonated taurine was structurally characterized by single-crystal X-ray diffraction analysis, low-temperature vibrational spectroscopy and NMR spectroscopy.</p>","PeriodicalId":7115,"journal":{"name":"Acta Crystallographica Section C Structural Chemistry","volume":" ","pages":"781-786"},"PeriodicalIF":0.7,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11619780/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142674811","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-11-20DOI: 10.1107/S2053229624010714
Sebastian Steiner, Kristina Djordjevic, Valentin Bockmair, Dirk Hollenwäger, Andreas J Kornath
The reactions of oxalyl chloride were investigated in the binary superacidic systems HF/SbF5 and DF/SbF5. O-Monoprotonated oxalyl chloride was isolated and represents the first example of a protonated acyl chloride. Diprotonated oxalyl chloride is only stable in solution. Salts of the ClCO+ cation were synthesized from the reactions of oxalyl chloride or COClF with SbF5 in 1,1,1,2-tetrafluoroethane (R-134a, CF3CFH2). The colourless salts were characterized by low-temperature vibrational spectroscopy, NMR spectroscopy and single-crystal X-ray diffraction. (1,2-Dichloro-2-oxoethylidene)oxidanium hexafluoridoantimonate(V), [C2O(OH)Cl2][SbF6], crystallizes in the monoclinic space group P21 and carbonyl chloride hexadecafluoridotriarsenate(V) [ClCO][Sb3F16], in the trigonal space group P31, with two and three formula units per unit cell, respectively. Monoprotonated oxalyl chloride and the ClCO+ cation both display very short C-Cl bonds with a strong double-bond character.
{"title":"Protonated oxalyl chloride and the ClCO<sup>+</sup> cation.","authors":"Sebastian Steiner, Kristina Djordjevic, Valentin Bockmair, Dirk Hollenwäger, Andreas J Kornath","doi":"10.1107/S2053229624010714","DOIUrl":"10.1107/S2053229624010714","url":null,"abstract":"<p><p>The reactions of oxalyl chloride were investigated in the binary superacidic systems HF/SbF<sub>5</sub> and DF/SbF<sub>5</sub>. O-Monoprotonated oxalyl chloride was isolated and represents the first example of a protonated acyl chloride. Diprotonated oxalyl chloride is only stable in solution. Salts of the ClCO<sup>+</sup> cation were synthesized from the reactions of oxalyl chloride or COClF with SbF<sub>5</sub> in 1,1,1,2-tetrafluoroethane (R-134a, CF<sub>3</sub>CFH<sub>2</sub>). The colourless salts were characterized by low-temperature vibrational spectroscopy, NMR spectroscopy and single-crystal X-ray diffraction. (1,2-Dichloro-2-oxoethylidene)oxidanium hexafluoridoantimonate(V), [C<sub>2</sub>O(OH)Cl<sub>2</sub>][SbF<sub>6</sub>], crystallizes in the monoclinic space group P2<sub>1</sub> and carbonyl chloride hexadecafluoridotriarsenate(V) [ClCO][Sb<sub>3</sub>F<sub>16</sub>], in the trigonal space group P3<sub>1</sub>, with two and three formula units per unit cell, respectively. Monoprotonated oxalyl chloride and the ClCO<sup>+</sup> cation both display very short C-Cl bonds with a strong double-bond character.</p>","PeriodicalId":7115,"journal":{"name":"Acta Crystallographica Section C Structural Chemistry","volume":" ","pages":"792-797"},"PeriodicalIF":0.7,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11619778/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142674813","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-11-20DOI: 10.1107/S2053229624010672
Brendan F Abrahams, Richard Robson, Christopher J Commons
A new crystalline compound, catena-poly[hexa-μ-acetato-(acetic acid)-μ3-oxido-triangulo-triiron(III)]-μ-acetato], [Fe3(C2H3O2)7O(C2H4O2)]n, incorporating the basic ferric acetate unit, has been obtained from an acetic anhydride solution of hydrated iron(III) nitrate. The crystals have the composition Fe3O(OAc)7(HOAc) (HOAc is acetic acid) and include the well-known [Fe3O(OAc)6]+ unit, in which the FeIII centres are linked to a central coplanar μ3-oxido ligand. Acetate ions provide bridges between pairs of FeIII centres. These individual [Fe3O(OAc)6]+ units are linked by additional bridging acetate anions to form zigzag chains. The bridging acetate ions coordinate to a position trans to the oxido group on two of the FeIII centres. Remarkably, the trans site on the third FeIII centre is occupied by the carbonyl group of an acetic acid molecule. This is the first reported case of an acetic acid molecule coordinating to an FeIII centre. Not surprisingly, the acetic acid molecule is only weakly coordinating, resulting in a short Fe-O(oxido) bond trans to the carbonyl group. The trans influence apparent in this structure provides an interesting contrast with the structurally similar MnIII analogue, in which the corresponding pair of trans bonds are both elongated because of the Jahn-Teller effect.
{"title":"A polymeric form of basic iron(III) acetate with an acetic acid ligand.","authors":"Brendan F Abrahams, Richard Robson, Christopher J Commons","doi":"10.1107/S2053229624010672","DOIUrl":"10.1107/S2053229624010672","url":null,"abstract":"<p><p>A new crystalline compound, catena-poly[hexa-μ-acetato-(acetic acid)-μ<sub>3</sub>-oxido-triangulo-triiron(III)]-μ-acetato], [Fe<sub>3</sub>(C<sub>2</sub>H<sub>3</sub>O<sub>2</sub>)<sub>7</sub>O(C<sub>2</sub>H<sub>4</sub>O<sub>2</sub>)]<sub>n</sub>, incorporating the basic ferric acetate unit, has been obtained from an acetic anhydride solution of hydrated iron(III) nitrate. The crystals have the composition Fe<sub>3</sub>O(OAc)<sub>7</sub>(HOAc) (HOAc is acetic acid) and include the well-known [Fe<sub>3</sub>O(OAc)<sub>6</sub>]<sup>+</sup> unit, in which the Fe<sup>III</sup> centres are linked to a central coplanar μ<sub>3</sub>-oxido ligand. Acetate ions provide bridges between pairs of Fe<sup>III</sup> centres. These individual [Fe<sub>3</sub>O(OAc)<sub>6</sub>]<sup>+</sup> units are linked by additional bridging acetate anions to form zigzag chains. The bridging acetate ions coordinate to a position trans to the oxido group on two of the Fe<sup>III</sup> centres. Remarkably, the trans site on the third Fe<sup>III</sup> centre is occupied by the carbonyl group of an acetic acid molecule. This is the first reported case of an acetic acid molecule coordinating to an Fe<sup>III</sup> centre. Not surprisingly, the acetic acid molecule is only weakly coordinating, resulting in a short Fe-O(oxido) bond trans to the carbonyl group. The trans influence apparent in this structure provides an interesting contrast with the structurally similar Mn<sup>III</sup> analogue, in which the corresponding pair of trans bonds are both elongated because of the Jahn-Teller effect.</p>","PeriodicalId":7115,"journal":{"name":"Acta Crystallographica Section C Structural Chemistry","volume":" ","pages":"787-791"},"PeriodicalIF":0.7,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142674810","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-11-25DOI: 10.1107/S2053229624011185
Hamza Kherfi, Mohamed Al Amine Benhacine, Malika Hamadene
The synthesis, single-crystal X-ray structure determination and thermal analysis are reported for a novel heteronuclear oxalate compound synthesized from a mixture of Fe and Na salts, oxalic acid and N,N-dimethylformamide (DMF) in aqueous solution. The new metallooxalate compound was obtained and identified as a dimethylammonium tris(oxalato)ferrate(III), namely, poly[[bis(dimethylammonium) [tri-μ-oxalato-sodium(I)iron(III)]]-dimethylamine-water (3/1/1)], [NH2(CH3)2]2[NaFe(C2O4)3]·0.33NH(CH3)2·0.33H2O, which crystallizes in the orthorhombic noncentrosymmetric space group C2221. In this novel structure, each Fe atom is hexacoordinated by three non-equivalent bidentate oxalate ligands, while the four Na atoms adopt different coordination numbers, i.e. 6, 7 and 8. The structure consists of bimetallic anionic A layers, {[NaFe(C2O4)3]2-}n, displaying a layered structure with infinitely linked Fe2Na2 tetramers on the ab plane. Two kinds of bimetallic parallel layers (A1 and A2) are present alternately and are found to be staggered, while only the A2 layer is crossed by a twofold axis parallel to the a axis through two Na atoms. The [NH2(CH3)2]+ (HDMA) cations occupy the voids between the anionic layers, while the free molecules, i.e. NH(CH3)2 (DMA) and H2O, are located between two different anionic layers. In addition to ionic bonds, the stability of the structure is ensured by hydrogen-bond interactions involving the oxalate ligands and the nitrogenous and water molecules. The layered structure appears to be different in the family of oxalate-bridged NaI-FeIII compounds. It is in agreement with the predicted 2D or layered structure of bimetallic complexes containing anionic tris(oxalato)metallate(III) with the [XR4]+ counter-ion template (X = N, P or S, and R = alkyl group or H). The thermal decomposition of the compound shows the final residual product to be NaFeO2.
报告了一种新型异核草酸盐化合物的合成、单晶 X 射线结构测定和热分析,该化合物是由铁盐和 Na 盐、草酸和 N,N-二甲基甲酰胺 (DMF) 在水溶液中的混合物合成的。得到的新金属草酸盐化合物被鉴定为二甲基铵三(草酸)铁(III),即聚[[双(二甲基铵) [三-μ-草酸-钠(I)铁(III)]]-二甲基胺-水 (3/1/1)],[NH2(CH3)2]2[NaFe(C2O4)3]-0。33NH(CH3)2-0.33H2O,在正交非五次对称空间群 C2221 中结晶。在这种新颖的结构中,每个铁原子都由三个非等价的双齿草酸盐配体六配位,而四个 Na 原子则采用不同的配位数,即 6、7 和 8。该结构由双金属阴离子 A 层组成,{[NaFe(C2O4)3]2-}n 在 ab 平面上显示出无限连接的 Fe2Na2 四聚体的层状结构。两种双金属平行层(A1 层和 A2 层)交替出现,并且交错排列,只有 A2 层通过两个 Na 原子以平行于 a 轴的两倍轴交叉。[NH2(CH3)2]+(HDMA)阳离子占据了阴离子层之间的空隙,而游离分子,即 NH(CH3)2 (DMA) 和 H2O 则位于两个不同的阴离子层之间。除了离子键外,草酸盐配体与氮分子和水分子之间的氢键相互作用也确保了结构的稳定性。在草酸盐桥接的 NaI-FeIII 化合物家族中,层状结构似乎有所不同。这与含有阴离子三(草酸)金属酸盐(III)和 [XR4]+ 反离子模板(X = N、P 或 S,R = 烷基或 H)的双金属复合物的预测二维或层状结构一致。化合物的热分解显示最终残留产物为 NaFeO2。
{"title":"A novel layered structure of the heterometallic oxalate compound [NH<sub>2</sub>(CH<sub>3</sub>)<sub>2</sub>]<sub>2</sub>[NaFe(C<sub>2</sub>O<sub>4</sub>)<sub>3</sub>]·0.33NH(CH<sub>3</sub>)<sub>2</sub>·0.33H<sub>2</sub>O: synthesis, crystal structure and thermal decomposition.","authors":"Hamza Kherfi, Mohamed Al Amine Benhacine, Malika Hamadene","doi":"10.1107/S2053229624011185","DOIUrl":"10.1107/S2053229624011185","url":null,"abstract":"<p><p>The synthesis, single-crystal X-ray structure determination and thermal analysis are reported for a novel heteronuclear oxalate compound synthesized from a mixture of Fe and Na salts, oxalic acid and N,N-dimethylformamide (DMF) in aqueous solution. The new metallooxalate compound was obtained and identified as a dimethylammonium tris(oxalato)ferrate(III), namely, poly[[bis(dimethylammonium) [tri-μ-oxalato-sodium(I)iron(III)]]-dimethylamine-water (3/1/1)], [NH<sub>2</sub>(CH<sub>3</sub>)<sub>2</sub>]<sub>2</sub>[NaFe(C<sub>2</sub>O<sub>4</sub>)<sub>3</sub>]·0.33NH(CH<sub>3</sub>)<sub>2</sub>·0.33H<sub>2</sub>O, which crystallizes in the orthorhombic noncentrosymmetric space group C222<sub>1</sub>. In this novel structure, each Fe atom is hexacoordinated by three non-equivalent bidentate oxalate ligands, while the four Na atoms adopt different coordination numbers, i.e. 6, 7 and 8. The structure consists of bimetallic anionic A layers, {[NaFe(C<sub>2</sub>O<sub>4</sub>)<sub>3</sub>]<sup>2-</sup>}<sub>n</sub>, displaying a layered structure with infinitely linked Fe<sub>2</sub>Na<sub>2</sub> tetramers on the ab plane. Two kinds of bimetallic parallel layers (A1 and A2) are present alternately and are found to be staggered, while only the A2 layer is crossed by a twofold axis parallel to the a axis through two Na atoms. The [NH<sub>2</sub>(CH<sub>3</sub>)<sub>2</sub>]<sup>+</sup> (HDMA) cations occupy the voids between the anionic layers, while the free molecules, i.e. NH(CH<sub>3</sub>)<sub>2</sub> (DMA) and H<sub>2</sub>O, are located between two different anionic layers. In addition to ionic bonds, the stability of the structure is ensured by hydrogen-bond interactions involving the oxalate ligands and the nitrogenous and water molecules. The layered structure appears to be different in the family of oxalate-bridged Na<sup>I</sup>-Fe<sup>III</sup> compounds. It is in agreement with the predicted 2D or layered structure of bimetallic complexes containing anionic tris(oxalato)metallate(III) with the [XR<sub>4</sub>]<sup>+</sup> counter-ion template (X = N, P or S, and R = alkyl group or H). The thermal decomposition of the compound shows the final residual product to be NaFeO<sub>2</sub>.</p>","PeriodicalId":7115,"journal":{"name":"Acta Crystallographica Section C Structural Chemistry","volume":" ","pages":"798-805"},"PeriodicalIF":0.7,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142708535","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-11-27DOI: 10.1107/S2053229624011082
Xiaoya Zhao, Boya Su, Qian Zhao, Wan Lv, Litong Chen, Lixin Huang, Xia Li, Shengyun Liao
Two novel Cu-based metal-organic frameworks (MOFs), namely, poly[[aquadichlorido[μ4-4'-(pyridin-4-yl)-[2,2':6',2''-terpyridine]-4,4''-dicarboxylato][μ3-4'-(pyridin-4-yl)-[2,2':6',2''-terpyridine]-4,4''-dicarboxylato]tricopper(II)] monohydrate], {[Cu3(C22H12N4O4)2Cl2(H2O)]·H2O}n or {[Cu3(PTP)2Cl2(H2O)]·H2O}n, (I), and poly[[diaquabis[μ2-4'-(pyridin-3-yl)-[2,2':6',2''-terpyridine]-4,4''-dicarboxylato]bis(μ2-terephthalato)tricopper(II)] dihydrate], {[Cu3(C22H12N4O4)2(C8H4O4)2(H2O)2]·2H2O}n or {[Cu3(BDC)2(MTP)2(H2O)2]·2H2O}n, (II), have been synthesized successfully with 4'-(pyridin-4-yl)-[2,2':6',2''-terpyridine]-4,4''-dicarboxylic acid (H2PTP) and 4'-(pyridin-3-yl)-[2,2':6',2''-terpyridine]-4,4''-dicarboxylic acid (H2MTP) as the ligands, respectively. Crystal structure analysis reveals that (II) possesses a 2D coordinated layer structure, in which adjacent 2D coordination layers are linked into 3D frameworks through π-π interactions, while the structure of (I) displays dual coordination layers, in which adjacent coordination layers are connected into a 3D framework through hydrogen-bonding interactions. The photophysical properties of the two MOFs were investigated by fluorescence spectroscopy. Complex (II) shows an obvious `turn-on' fluorescence enhancement effect towards flazasulfuron and its potential application for sensing flazasulfuron in water with high selectivity and sensitivity was also investigated in detail.
{"title":"Construction of pyridine-functionalized metal-organic frameworks for the detection of flazasulfuron.","authors":"Xiaoya Zhao, Boya Su, Qian Zhao, Wan Lv, Litong Chen, Lixin Huang, Xia Li, Shengyun Liao","doi":"10.1107/S2053229624011082","DOIUrl":"10.1107/S2053229624011082","url":null,"abstract":"<p><p>Two novel Cu-based metal-organic frameworks (MOFs), namely, poly[[aquadichlorido[μ<sub>4</sub>-4'-(pyridin-4-yl)-[2,2':6',2''-terpyridine]-4,4''-dicarboxylato][μ<sub>3</sub>-4'-(pyridin-4-yl)-[2,2':6',2''-terpyridine]-4,4''-dicarboxylato]tricopper(II)] monohydrate], {[Cu<sub>3</sub>(C<sub>22</sub>H<sub>12</sub>N<sub>4</sub>O<sub>4</sub>)<sub>2</sub>Cl<sub>2</sub>(H<sub>2</sub>O)]·H<sub>2</sub>O}<sub>n</sub> or {[Cu<sub>3</sub>(PTP)<sub>2</sub>Cl<sub>2</sub>(H<sub>2</sub>O)]·H<sub>2</sub>O}<sub>n</sub>, (I), and poly[[diaquabis[μ<sub>2</sub>-4'-(pyridin-3-yl)-[2,2':6',2''-terpyridine]-4,4''-dicarboxylato]bis(μ<sub>2</sub>-terephthalato)tricopper(II)] dihydrate], {[Cu<sub>3</sub>(C<sub>22</sub>H<sub>12</sub>N<sub>4</sub>O<sub>4</sub>)<sub>2</sub>(C<sub>8</sub>H<sub>4</sub>O<sub>4</sub>)<sub>2</sub>(H<sub>2</sub>O)<sub>2</sub>]·2H<sub>2</sub>O}<sub>n</sub> or {[Cu<sub>3</sub>(BDC)<sub>2</sub>(MTP)<sub>2</sub>(H<sub>2</sub>O)<sub>2</sub>]·2H<sub>2</sub>O}<sub>n</sub>, (II), have been synthesized successfully with 4'-(pyridin-4-yl)-[2,2':6',2''-terpyridine]-4,4''-dicarboxylic acid (H<sub>2</sub>PTP) and 4'-(pyridin-3-yl)-[2,2':6',2''-terpyridine]-4,4''-dicarboxylic acid (H<sub>2</sub>MTP) as the ligands, respectively. Crystal structure analysis reveals that (II) possesses a 2D coordinated layer structure, in which adjacent 2D coordination layers are linked into 3D frameworks through π-π interactions, while the structure of (I) displays dual coordination layers, in which adjacent coordination layers are connected into a 3D framework through hydrogen-bonding interactions. The photophysical properties of the two MOFs were investigated by fluorescence spectroscopy. Complex (II) shows an obvious `turn-on' fluorescence enhancement effect towards flazasulfuron and its potential application for sensing flazasulfuron in water with high selectivity and sensitivity was also investigated in detail.</p>","PeriodicalId":7115,"journal":{"name":"Acta Crystallographica Section C Structural Chemistry","volume":" ","pages":"806-814"},"PeriodicalIF":0.7,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142738020","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-11-27DOI: 10.1107/S2053229624011410
Yan Zhang, Xuefeng Xiao, Yan Huang, Jiashun Si, Shuaijie Liang, Qingyan Xu, Huan Zhang, Lingling Ma, Cui Yang, Xuefeng Zhang, Jiayue Xu, Tian Tian, Hui Shen
The effects of Eu3+ doping on the crystal structure and charge distribution of Bi4Si3O12 (BSO) bisilicate, based on first principles and density functional theory (DFT), were calculated and analyzed using Materials Studio software. The effect of different proportions (1/12, 1/6 and 1/3) of Eu3+ doping on BSO crystals was investigated using the virtual crystal approximation method. Through Mulliken charge analysis, it is found that a high proportion of Eu3+ doping will destroy the symmetry of the crystal structure. With an increase of the Eu3+-doping ratio, the Eu-O bond length first increased and then decreased, showing the characteristics of covalent bonds, and the Eu-O bond length reached the minimum value when the Eu3+-doping ratio was increased to 1/3. With an increase in the Eu3+-doping ratio, the Bi-O bond length decreases sequentially and also reaches the minimum value when the Eu3+-doping ratio was increased to 1/3. This indicates that the covalence between the Eu-O and Bi-O atoms is enhanced when the doping ratio is 1/3 when BSO crystals are doped with Eu3+.
{"title":"Eu<sup>3+</sup>-doped bismuth silicate crystal structure and Mulliken charge analysis.","authors":"Yan Zhang, Xuefeng Xiao, Yan Huang, Jiashun Si, Shuaijie Liang, Qingyan Xu, Huan Zhang, Lingling Ma, Cui Yang, Xuefeng Zhang, Jiayue Xu, Tian Tian, Hui Shen","doi":"10.1107/S2053229624011410","DOIUrl":"10.1107/S2053229624011410","url":null,"abstract":"<p><p>The effects of Eu<sup>3+</sup> doping on the crystal structure and charge distribution of Bi<sub>4</sub>Si<sub>3</sub>O<sub>12</sub> (BSO) bisilicate, based on first principles and density functional theory (DFT), were calculated and analyzed using Materials Studio software. The effect of different proportions (1/12, 1/6 and 1/3) of Eu<sup>3+</sup> doping on BSO crystals was investigated using the virtual crystal approximation method. Through Mulliken charge analysis, it is found that a high proportion of Eu<sup>3+</sup> doping will destroy the symmetry of the crystal structure. With an increase of the Eu<sup>3+</sup>-doping ratio, the Eu-O bond length first increased and then decreased, showing the characteristics of covalent bonds, and the Eu-O bond length reached the minimum value when the Eu<sup>3+</sup>-doping ratio was increased to 1/3. With an increase in the Eu<sup>3+</sup>-doping ratio, the Bi-O bond length decreases sequentially and also reaches the minimum value when the Eu<sup>3+</sup>-doping ratio was increased to 1/3. This indicates that the covalence between the Eu-O and Bi-O atoms is enhanced when the doping ratio is 1/3 when BSO crystals are doped with Eu<sup>3+</sup>.</p>","PeriodicalId":7115,"journal":{"name":"Acta Crystallographica Section C Structural Chemistry","volume":" ","pages":"815-820"},"PeriodicalIF":0.7,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142738022","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}