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Shrunken pore syndrome in relation to morbidity and mortality in the population-based Malmö Diet and Cancer cohort: a generalized propensity score approach. 在以人群为基础的Malmö饮食和癌症队列中,毛孔萎缩综合征与发病率和死亡率的关系:一种广义倾向评分方法。
Pub Date : 2025-09-30 eCollection Date: 2025-01-01 DOI: 10.3389/fepid.2025.1661167
Anna Åkesson, Liana Xhakollari, Agnė Laučytė-Cibulskiene, Anders Grubb, Anders Larsson, Amra Jujic, Martin Magnusson, Anders Christensson, Jonas Björk

Purpose: Glomerular filtration rate (GFR) is used for evaluating kidney function. Creatinine and cystatin C levels are the two endogenous substances used to estimate GFR (eGFRCR and eGFRCYS). The agreement between these two is reflected by the eGFRCYS/eGFRCR ratio. An eGFRCYS/eGFRCR ratio <0.70 has been strongly associated with mortality and morbidity. An explanation is a selective decrease in the filtration of substances of different masses, and this condition is referred to as "Shrunken pore syndrome" (SPS). We aim to investigate the prevalence of SPS and its association with morbidity and mortality in a well-characterized population-based cohort.

Methods: The study population consisted of 5,061 individuals from the Malmö Diet and Cancer cardiovascular cohort (MDC-CC) with baseline examinations between 1991 and 1994 and a median follow-up of 25.3 years (IQR = 5.7). The eGFRCYS/eGFRCR ratio was categorized into four groups and used to estimate a generalized propensity score for SPS to adjust for confounding factors. Individuals were matched to create a quartet (one from each eGFRCYS/eGFRCR ratio category) with similar scores. We related the eGFRCYS/eGFRCR ratio to all-cause mortality, incident cardiovascular disease, incident kidney disease, and incident diabetes using Cox proportional hazards models with shared frailty.

Results: SPS was detected in 405 individuals (8.0%). The hazard ratio (HR) for all-cause mortality was 1.6 [95% confidence interval (CI) 1.3-2.0] when comparing individuals with SPS to the reference group (eGFRCYS/eGFRCR ratio ≥ 1.0). For incident kidney disease, the association seems to stem from a low eGFRCYS rather than the eGFRCYS/eGFRCR ratio. For the other two outcomes, robust and statistically significant associations could not be found.

Conclusion: SPS was prevalent among middle-aged, generally healthy, individuals and led to markedly higher mortality during follow-up.

目的:用肾小球滤过率(Glomerular filtration rate, GFR)评价肾功能。肌酐和胱抑素C水平是用于估计GFR的两种内源性物质(eGFRCR和eGFRCYS)。两者之间的一致性体现在eGFRCYS/eGFRCR比值上。方法:研究人群包括5061名来自Malmö饮食和癌症心血管队列(MDC-CC)的个体,1991年至1994年间进行基线检查,中位随访25.3年(IQR = 5.7)。eGFRCYS/eGFRCR比率分为四组,用于估计SPS的广义倾向评分,以调整混杂因素。个体被匹配成具有相似分数的四人组(每个eGFRCYS/eGFRCR比例类别各一个)。我们使用具有共同虚弱的Cox比例风险模型,将eGFRCYS/eGFRCR比值与全因死亡率、心血管疾病发病率、肾脏疾病发病率和糖尿病发病率联系起来。结果:共检出SPS 405例(8.0%)。与对照组(eGFRCYS/eGFRCR比值≥1.0)相比,SPS患者全因死亡率的危险比(HR)为1.6[95%可信区间(CI) 1.3-2.0]。对于偶发肾病,这种关联似乎源于eGFRCYS较低而不是eGFRCYS/eGFRCR比值。对于其他两个结果,没有发现强有力的和统计上显著的关联。结论:SPS在中年健康人群中普遍存在,随访期间死亡率明显增高。
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引用次数: 0
Sex- and age-specific differences in excess mortality in China during the COVID-19 pandemic: a study based on official vital statistics data. COVID-19大流行期间中国超额死亡率的性别和年龄差异:基于官方生命统计数据的研究
Pub Date : 2025-09-25 eCollection Date: 2025-01-01 DOI: 10.3389/fepid.2025.1595453
Yao Li

Introduction: This study aimed to investigate the excess mortality observed in China between 2020 and 2023 and its underlying causes, including the COVID-19 pandemic, sex ratio, and aging trends.

Methods: We collected data regarding number of deaths and mortality rates of the years 2015-2019 from the China Statistical Yearbook of Population and Employment, and analyzed the data by age and sex. We created a standardized sex and age structure dataset and compared the excess mortality rates of different sexes and age groups for the years 2020 to 2023.

Results: The sex-and age-specific number of deaths in all three years decreased compared to the number of deaths in the standardized sex and age structure dataset. The most significant decline was observed in 2021, whereas the number of deaths in 2022 and 2023 increased compared to that in 2021. It has been found that excess mortality is generally less prevalent among older age groups, and excess mortality rate tends to be lower among younger age groups. Additionally, in 2021, 2022, and 2023, the excess mortality rate was greater for men than for women, whereas it was greater for women in 2020. These differences can be attributed to various factors.

Discussion: This is the first study to examine excess mortality in China during the COVID-19 pandemic using age- and sex-standardized data. These findings underscore the need for a deeper exploration of the effects of sex and age on health outcomes.

本研究旨在调查2020年至2023年中国观察到的超额死亡率及其潜在原因,包括COVID-19大流行、性别比例和老龄化趋势。方法:收集《中国人口与就业统计年鉴》2015-2019年的死亡人数和死亡率数据,按年龄和性别进行分析。我们创建了一个标准化的性别和年龄结构数据集,并比较了2020年至2023年不同性别和年龄组的超额死亡率。结果:与标准化性别和年龄结构数据集中的死亡人数相比,所有三年中特定性别和年龄的死亡人数有所减少。降幅最大的是2021年,而2022年和2023年的死亡人数较2021年有所增加。研究发现,在年龄较大的年龄组中,超额死亡率一般不太普遍,而在较年轻的年龄组中,超额死亡率往往较低。此外,在2021、2022和2023年,男性的超额死亡率高于女性,而在2020年,女性的超额死亡率高于女性。这些差异可归因于各种因素。讨论:这是首个使用年龄和性别标准化数据调查中国COVID-19大流行期间超额死亡率的研究。这些发现强调有必要对性别和年龄对健康结果的影响进行更深入的探索。
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引用次数: 0
Assessing the long-term persistence of SARS-CoV-2 in Guinea: insights from post-epidemic sentinel syndromic surveillance data. 评估SARS-CoV-2在几内亚的长期持续性:来自疫情后哨点综合征监测数据的见解
Pub Date : 2025-09-25 eCollection Date: 2025-01-01 DOI: 10.3389/fepid.2025.1636286
Kadio Jean Jacques Olivier Kadio, Thibaut Armel Chérif Gnimadi, Emilande Guichet, Castro Gbêmemali Hounmenou, Abdoul Karim Soumah, Haby Diallo, Amadou Camara, Saidouba Chérif Camara, Marie Rose Sandouno, Salifou Talassone Bangoura, Maladho Diaby, Vincent Richard, Julien Poublan, Sidikiba Sidibé, Alexandre Delamou, Alioune Camara, Alpha Kabinet Kéita, Eric Delaporte, Abdoulaye Touré

Background: In December 2019, the world experienced one of the significant health crises of the 21st century with the emergence and rapid spread of the potentially fatal 2019 coronavirus (COVID-19). In this context, sentinel surveillance of SARS-CoV-2 variants was conducted in Conakry. Here we report the first data on reproduction numbers and risk factors during the Omicron post-epidemic period in Guinea.

Methods: A sentinel syndromic and genomic surveillance study was conducted on suspected patients from October 2022 to July 2024 at healthcare facilities in Conakry. Individual data and nasopharyngeal swabs were collected and sent to the Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG) laboratory for screening and sequencing by next-generation sequencing (NGS). The effective reproduction number (Rt) were estimated using EpiEstim to assess the transmission potential of the Omicron variant. Generalized linear models based on the binomial distribution were employed to analyze factors associated with SARS-CoV-2 positivity, following the identification of primary risk factors using Bayesian model averaging and the Data balancing algorithm using propensity score matching.

Results: Data from 1174 patients with suspected cases with a median age of 31 years (IQR: 20-51), were analyzed. The overall COVID-19 positivity rate was 11.8%. The global effective reproduction number (Rt) was 2.08 [95% CI: 0.35-5.81]. Only ageusia [AOR = 2.0; 95% CI (1.1-3.6)] was independently associated with SARS-CoV-2 test positivity.

Conclusion: SARS-CoV-2 is still circulating in Guinea, with a high positivity rate and a high number of effective reproductions in this post-epidemic period in our country. The associated factors and the circulation of variants with a diversity of circulating strains suggest the need to strengthen genomic and epidemiological surveillance, with the support of all those involved in the response to COVID-19, to ensure continuity of alerts and decision-making for public health.

背景:2019年12月,随着可能致命的2019冠状病毒(COVID-19)的出现和迅速传播,世界经历了21世纪的重大卫生危机之一。在此背景下,在科纳克里对SARS-CoV-2变体进行了哨点监测。在这里,我们报告了关于Omicron流行病后时期几内亚繁殖数量和风险因素的第一批数据。方法:对2022年10月至2024年7月在科纳克里医疗机构的疑似患者进行哨点综合征和基因组监测研究。收集个人资料和鼻咽拭子,并将其送到几内亚传染病研究与形成中心(CERFIG)实验室,通过下一代测序(NGS)进行筛选和测序。利用EpiEstim估计有效繁殖数(Rt),评估Omicron变异的传播潜力。采用基于二项分布的广义线性模型分析与SARS-CoV-2阳性相关的因素,采用贝叶斯模型平均和倾向评分匹配的数据平衡算法识别主要危险因素。结果:分析了1174例疑似病例的资料,中位年龄31岁(IQR: 20-51)。新冠肺炎总阳性率为11.8%。整体有效繁殖数(Rt)为2.08 [95% CI: 0.35-5.81]。只有老年痴呆[AOR = 2.0;95% CI(1.1-3.6)]与SARS-CoV-2检测阳性独立相关。结论:我国疫情后时期SARS-CoV-2仍在几内亚流行,阳性率高,有效复制数高。相关因素和具有多种流行毒株的变异的传播表明,需要在参与应对COVID-19的所有人的支持下加强基因组和流行病学监测,以确保公共卫生警报和决策的连续性。
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引用次数: 0
Bayesian meta-analysis of the effectiveness of implementation science evidence in improving health outcomes for adolescent patients accessing ART in sub-Saharan Africa. 实施科学证据在改善撒哈拉以南非洲青少年患者获得抗逆转录病毒治疗的健康结果方面的有效性的贝叶斯荟萃分析。
Pub Date : 2025-09-17 eCollection Date: 2025-01-01 DOI: 10.3389/fepid.2025.1547867
Isaac Fwemba, Samuel Iddi, Thabane Lehane, Alfred Yawson, Jacques L Tamuzi, Peter S Nyasulu, Samuel Bosomprah

Background: Implementation research (IR) studies and clinical trials have yielded conflicting results on improving treatment outcomes, especially among adolescent patients. To address this, we performed a Bayesian random-effects meta-analysis to evaluate the effectiveness of current IR interventions in improving retention in care and reducing viral suppression among HIV-infected adolescents.

Method: A comprehensive search was conducted from 1 January 2000 to 31 December 2020. A Bayesian random-effects meta-analysis was performed using historical evidence from adolescent interventions conducted outside sub-Saharan Africa (SSA) and from adult-derived interventions within SSA. A Bayesian Copas random-effects model was used to account for publication bias and study variations. Power priors were used to weight the contribution of historical data to the analysis. Bayesian meta-analysis was particularly suited for this study since it allowed us to directly include prior assessments from several intervention studies into the pooled intervention data.

Results: The pooled results from the 12 studies across eight African countries, involving 19,223 adolescent patients, showed significantly superior retention effects in adolescent-specialized interventions compared to standard care settings [odds ratio (OR) = 3.87; 95% credible interval (CrI): 0.94-10.82]. When 100% of data from eight observational studies on adolescent treatment outcomes were added to the analysis, the resulting OR was 3.02 (95% CrI: 1.01, 6.92). However, inclusion of 100% of historical data from adult randomised control trials (RCTs) reduced the retention effect to OR = 1.24 (95% CrI: 1.03-1.48). Regardless of whether adolescent historical data or adult RCT data were used, the associated posterior probability of benefiting from the intervention remained almost 1. There was no difference between standard care and specialized adolescent care in terms of virological suppression (OR = 1.27; 95% CrI: 0.57-2.32). However, specialized adolescent intervention achieved a superior overall retention rate of 59.7% compared to 52.1% under standard care.

Conclusion: Current adolescent-specific interventions are effective in improving retention rates in HIV care. Evidence from adult interventions showed a reduced retention effect, suggesting that while adult-promising interventions may improve adolescent treatment outcomes, they may require modifications.

背景:实施研究(IR)研究和临床试验在改善治疗结果方面产生了相互矛盾的结果,特别是在青少年患者中。为了解决这个问题,我们进行了一项贝叶斯随机效应荟萃分析,以评估当前IR干预措施在改善艾滋病毒感染青少年的护理保留和减少病毒抑制方面的有效性。方法:于2000年1月1日至2020年12月31日进行全面检索。使用撒哈拉以南非洲(SSA)以外的青少年干预和SSA内的成人干预的历史证据,进行了贝叶斯随机效应荟萃分析。使用贝叶斯Copas随机效应模型来解释发表偏倚和研究差异。幂先验被用来衡量历史数据对分析的贡献。贝叶斯荟萃分析特别适合这项研究,因为它允许我们直接将几个干预研究的先前评估纳入综合干预数据。结果:来自8个非洲国家的12项研究,涉及19,223名青少年患者的汇总结果显示,与标准护理设置相比,青少年专门干预的保留效果显著优于标准护理设置[优势比(OR) = 3.87;95%可信区间(CrI): 0.94-10.82。当将8项关于青少年治疗结果的观察性研究的100%数据加入分析时,结果OR为3.02 (95% CrI: 1.01, 6.92)。然而,100%纳入成人随机对照试验(RCTs)的历史数据将保留效应降低至OR = 1.24 (95% CrI: 1.03-1.48)。无论使用的是青少年历史数据还是成人RCT数据,从干预中获益的相关后验概率仍然接近1。标准护理和青少年专科护理在病毒学抑制方面没有差异(OR = 1.27; 95% CrI: 0.57-2.32)。然而,与标准治疗的52.1%相比,专门的青少年干预的总体保留率为59.7%。结论:目前针对青少年的干预措施在提高艾滋病护理的保留率方面是有效的。来自成人干预的证据表明,保留效应降低,这表明虽然成人有希望的干预可能改善青少年的治疗结果,但它们可能需要修改。
{"title":"Bayesian meta-analysis of the effectiveness of implementation science evidence in improving health outcomes for adolescent patients accessing ART in sub-Saharan Africa.","authors":"Isaac Fwemba, Samuel Iddi, Thabane Lehane, Alfred Yawson, Jacques L Tamuzi, Peter S Nyasulu, Samuel Bosomprah","doi":"10.3389/fepid.2025.1547867","DOIUrl":"10.3389/fepid.2025.1547867","url":null,"abstract":"<p><strong>Background: </strong>Implementation research (IR) studies and clinical trials have yielded conflicting results on improving treatment outcomes, especially among adolescent patients. To address this, we performed a Bayesian random-effects meta-analysis to evaluate the effectiveness of current IR interventions in improving retention in care and reducing viral suppression among HIV-infected adolescents.</p><p><strong>Method: </strong>A comprehensive search was conducted from 1 January 2000 to 31 December 2020. A Bayesian random-effects meta-analysis was performed using historical evidence from adolescent interventions conducted outside sub-Saharan Africa (SSA) and from adult-derived interventions within SSA. A Bayesian Copas random-effects model was used to account for publication bias and study variations. Power priors were used to weight the contribution of historical data to the analysis. Bayesian meta-analysis was particularly suited for this study since it allowed us to directly include prior assessments from several intervention studies into the pooled intervention data.</p><p><strong>Results: </strong>The pooled results from the 12 studies across eight African countries, involving 19,223 adolescent patients, showed significantly superior retention effects in adolescent-specialized interventions compared to standard care settings [odds ratio (OR) = 3.87; 95% credible interval (CrI): 0.94-10.82]. When 100% of data from eight observational studies on adolescent treatment outcomes were added to the analysis, the resulting OR was 3.02 (95% CrI: 1.01, 6.92). However, inclusion of 100% of historical data from adult randomised control trials (RCTs) reduced the retention effect to OR = 1.24 (95% CrI: 1.03-1.48). Regardless of whether adolescent historical data or adult RCT data were used, the associated posterior probability of benefiting from the intervention remained almost 1. There was no difference between standard care and specialized adolescent care in terms of virological suppression (OR = 1.27; 95% CrI: 0.57-2.32). However, specialized adolescent intervention achieved a superior overall retention rate of 59.7% compared to 52.1% under standard care.</p><p><strong>Conclusion: </strong>Current adolescent-specific interventions are effective in improving retention rates in HIV care. Evidence from adult interventions showed a reduced retention effect, suggesting that while adult-promising interventions may improve adolescent treatment outcomes, they may require modifications.</p>","PeriodicalId":73083,"journal":{"name":"Frontiers in epidemiology","volume":"5 ","pages":"1547867"},"PeriodicalIF":0.0,"publicationDate":"2025-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12484029/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145214646","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Burden of gastric cancer in Ecuador (2010-2021): a gender- and age-specific analysis using disability-adjusted life years (DALYs). 厄瓜多尔胃癌负担(2010-2021):使用残疾调整生命年(DALYs)的性别和年龄特异性分析
Pub Date : 2025-09-12 eCollection Date: 2025-01-01 DOI: 10.3389/fepid.2025.1643323
Ricardo Yajamín-Villamarín

Background: Gastric cancer (GC) is a major public health issue and a leading cause of cancer-related mortality in Ecuador. Despite national cancer control efforts, the burden remains high, with variations by gender and age. This study aimed to quantify the burden of GC in Ecuador from 2010 to 2021 using Disability-Adjusted Life Years (DALYs), providing insights for public health strategies.

Methods: A cross-sectional study was conducted using hospital discharge and mortality data from the National Institute of Statistics and Census (INEC). The study included all Ecuadorian individuals diagnosed with GC (ICD-10: C16) from 2010 to 2021. The burden of disease was estimated using DALYs, which combined Years of Life Lost (YLL) and Years Lived with Disability (YLD). Data were stratified by gender and age groups. Analyses were performed using Microsoft Excel and the DALY calculator in R v4.2.1.

Results: Between 2010 and 2021, GC accounted for 802,135 DALYs in Ecuador, with an annual average of 66,845 DALYs. Males accounted for 57.2% of the total burden. The highest impact was observed in individuals aged 65-69 years. A progressive increase in disease burden was identified, particularly among older age groups.

Conclusions: The findings highlight the need for targeted interventions, including early detection programs, risk reduction strategies, and improved healthcare access. Strengthening public health policies is crucial to mitigating the rising burden of GC in Ecuador.

背景:胃癌(GC)是厄瓜多尔主要的公共卫生问题,也是癌症相关死亡的主要原因。尽管国家努力控制癌症,但负担仍然很高,因性别和年龄而异。本研究旨在利用残疾调整生命年(DALYs)量化2010年至2021年厄瓜多尔GC负担,为公共卫生战略提供见解。方法:采用美国国家统计与人口普查研究所(INEC)的出院和死亡率数据进行横断面研究。该研究包括2010年至2021年诊断为GC (ICD-10: C16)的所有厄瓜多尔人。疾病负担是用伤残调整生命年(DALYs)来估计的,伤残调整生命年(YLL)和伤残生活年(YLD)相结合。数据按性别和年龄组分层。使用Microsoft Excel和R v4.2.1中的DALY计算器进行分析。结果:2010年至2021年期间,厄瓜多尔GC占802,135个DALYs,年均66,845个DALYs。男性占总负担的57.2%。在65-69岁的人群中观察到的影响最大。疾病负担逐渐增加,特别是在老年群体中。结论:研究结果强调了有针对性的干预措施的必要性,包括早期发现计划、降低风险战略和改善医疗保健服务。加强公共卫生政策对于减轻厄瓜多尔日益加重的胃癌负担至关重要。
{"title":"Burden of gastric cancer in Ecuador (2010-2021): a gender- and age-specific analysis using disability-adjusted life years (DALYs).","authors":"Ricardo Yajamín-Villamarín","doi":"10.3389/fepid.2025.1643323","DOIUrl":"10.3389/fepid.2025.1643323","url":null,"abstract":"<p><strong>Background: </strong>Gastric cancer (GC) is a major public health issue and a leading cause of cancer-related mortality in Ecuador. Despite national cancer control efforts, the burden remains high, with variations by gender and age. This study aimed to quantify the burden of GC in Ecuador from 2010 to 2021 using Disability-Adjusted Life Years (DALYs), providing insights for public health strategies.</p><p><strong>Methods: </strong>A cross-sectional study was conducted using hospital discharge and mortality data from the National Institute of Statistics and Census (INEC). The study included all Ecuadorian individuals diagnosed with GC (ICD-10: C16) from 2010 to 2021. The burden of disease was estimated using DALYs, which combined Years of Life Lost (YLL) and Years Lived with Disability (YLD). Data were stratified by gender and age groups. Analyses were performed using Microsoft Excel and the DALY calculator in R v4.2.1.</p><p><strong>Results: </strong>Between 2010 and 2021, GC accounted for 802,135 DALYs in Ecuador, with an annual average of 66,845 DALYs. Males accounted for 57.2% of the total burden. The highest impact was observed in individuals aged 65-69 years. A progressive increase in disease burden was identified, particularly among older age groups.</p><p><strong>Conclusions: </strong>The findings highlight the need for targeted interventions, including early detection programs, risk reduction strategies, and improved healthcare access. Strengthening public health policies is crucial to mitigating the rising burden of GC in Ecuador.</p>","PeriodicalId":73083,"journal":{"name":"Frontiers in epidemiology","volume":"5 ","pages":"1643323"},"PeriodicalIF":0.0,"publicationDate":"2025-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12463957/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145187550","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Geographic mapping and spatiotemporal patterns of tuberculosis in Libya within ten years' period (2015 to 2024). 利比亚结核病10年(2015 - 2024年)地理制图与时空格局
Pub Date : 2025-09-11 eCollection Date: 2025-01-01 DOI: 10.3389/fepid.2025.1571065
Mohamed Ali Daw, Abdallah H El-Bouzedi, Saleh Ali Abumahara, Abdurrahman Khalifa Najjar, Nouri R Ben Ashur, Alaa Grebi, Amnnh Mohammed Dhu, Ali Fathi Alkarghali, Shahid Husayn Mohammed, Raja Khalid Miftah, Najmuldin Abdulbasit Abdulsamad, Mohammed Saad Elbasha, Asawer Seifennaser Doukali, Nosieba Taher Elmhidwi, Esra Othman Albouzaidi, Said Emhamed Wareg, Mohamed Omar Ahmed

Introduction: Tuberculosis(TB) is still a serious problem with a remarkable global impacts particularly within developing countries such as Libya. According to World Health Organization (WHO) global report, the country is considered a moderate TB burden with incidence of 40 per 100,000 in 2011. Geographic epidemiology has been considered an important tool in preventing TB in large countries. In this study, we intended to identify the geographic and spatiotemporal patterns of the TB incidence rate in Libya between 2015 and 2024.

Methods: A cross-sectional retrospective analytical study was conducted within ten years on the data reported through the National TB surveillance system. The data on all TB cases reported from 2015 to 2024 by municipality and region was abstracted. Choropleth maps were drawn showing the TB case notification rates (CNR) per 100,000. Local Moran's I was performed to identify the spatial variations of the disease and temporal and Spatiotemporal analyses were employed in all instances.

Results: During the entire study period, 26,478 TB cases were reported from all 22 municipalities in Libya with an annual rate of 40.29/100,000 (95% CI: (40.229 ± 9.01). The highest incidence was reported in 2015 and the lowest one in 2024. Males were significantly reported more than females among notified TB cases, (P < 0.001). The highest CNR was reported in the Eastern region followed by Western and Southern regions. The geospatial distribution of reported cases of TB varied greatly within the provinces and during the study period. There was evident variability throughout the country and over time. High-rate and low-rate clusters were predominantly distributed in the periods. High clusters were concentrated northeast and northwest, though low-level clusters were mainly located in the middle and the southern region of the country.

Conclusion: The results of this study provided clear insights into the geographic and spatiotemporal mapping of TB in Libya. There was an overall decreasing trend in TB CNR from 2015 to 2024 parallel with high-risk and low-risk areas. This information should allow the decision-making personnel to implement proper policies to combat TB at national and regional levels.

结核病(TB)仍然是一个严重的问题,具有显著的全球影响,特别是在发展中国家,如利比亚。根据世界卫生组织(世卫组织)的全球报告,该国被认为是结核负担中等的国家,2011年的发病率为每10万人40例。地理流行病学被认为是大国预防结核病的重要工具。在这项研究中,我们旨在确定利比亚2015年至2024年间结核病发病率的地理和时空格局。方法:对通过国家结核病监测系统报告的数据进行了十年的横断面回顾性分析研究。对2015 - 2024年各城市和地区报告的所有结核病病例数据进行了抽取。绘制了显示每10万人结核病例通报率(CNR)的地图集。进行了局部Moran's I来确定疾病的空间变化,并在所有情况下采用了时间和时空分析。结果:在整个研究期间,利比亚所有22个城市报告了26,478例结核病病例,年发病率为40.29/100,000 (95% CI:(40.229±9.01))。2015年报告发病率最高,2024年报告发病率最低。报告的结核病病例中,男性明显多于女性。结论:本研究结果为利比亚结核病的地理和时空制图提供了清晰的见解。2015 - 2024年结核发病率总体呈下降趋势,与高、低风险区呈平行趋势。这些信息应使决策人员能够在国家和区域各级实施适当的防治结核病政策。
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引用次数: 0
Concordance of coverage estimates from routine and survey data of measles second dose vaccine in Western Kenya. 肯尼亚西部麻疹第二剂疫苗常规数据和调查数据覆盖率估计的一致性。
Pub Date : 2025-09-11 eCollection Date: 2025-01-01 DOI: 10.3389/fepid.2025.1663372
Angela K Moturi, Moses M Musau, Samuel K Muchiri, Peter M Macharia, Robert W Snow, Emelda A Okiro

Background: Missed opportunities for key vaccinations continue to exacerbate disease outbreaks. Accurately monitoring immunisation coverage is fundamental to identifying gaps in vaccine delivery and informing timely action. This study assesses the agreement between routine and survey-based coverage estimates for the second dose of the measles vaccine (MCV2) in Western Kenya.

Methods: This study utilised model-based geostatistics estimates MCV2 coverage from the 2022 Kenya Demographic and Health Survey (DHS), monthly immunisation data from routine health information systems (2019-2022) imputed for missingness and population data from WorldPop for 2019 across 62 Western Kenyan subnational areas (sub-counties). Routine MCV2 coverage was computed using MCV2 doses as a numerator and two separate denominators: (i) Pentavalent 1 doses to account for children already receiving prior vaccines at health facilities (service-based coverage) and (ii) surviving infants to account for all eligible children (population-based coverage). Concordance was assessed using the 95% confidence intervals (CIs) of survey-modelled estimates, intra-class correlation coefficient (ICC), and Bland-Altman (BA) plots.

Results: Survey-modelled estimates differed substantially in 55 (89%) and 39 (63%) sub-counties compared to population and service-based coverage estimates respectively. The different approaches showed poor congruence in survey-modelled vs. population-based coverage estimates (ICC: 0.10, p = 0.229) and survey-modelled vs. service-based coverage estimates (ICC: 0.42, p = <0.001); there was moderate congruence of population vs. service-based coverage estimates (ICC: 0.65, p = <0.001). Survey-modelled vs. population-based coverage estimates showed the highest bias in BA plots of 18.80 percent points (p.p) compared to 11.02 p.p. and 7.79 p.p. between survey-modelled vs. service-based coverage and population vs. service-based coverage estimates, respectively.

Conclusions: Substantial discrepancies among survey-modelled, routine population, and service-based coverage estimates expose important variations in each approaches' results. While all approaches offer distinct insights, improving survey models, routine data quality and refining estimates of population catchment is imperative for reliable fine-scale vaccine delivery monitoring.

背景:错过关键疫苗接种机会继续加剧疾病暴发。准确监测免疫覆盖率对于确定疫苗提供方面的差距和及时通报行动至关重要。本研究评估了肯尼亚西部常规和基于调查的第二剂麻疹疫苗(MCV2)覆盖率估计之间的一致性。方法:本研究利用基于模型的地质统计学估计2022年肯尼亚人口与健康调查(DHS)的MCV2覆盖率,来自常规卫生信息系统(2019-2022年)的月度免疫接种数据,以及来自世界人口普查的2019年肯尼亚西部62个次国家地区(次县)的人口数据。常规MCV2接种覆盖率是使用MCV2剂量作为分子和两个单独的分母来计算的:(i)五价1剂量,用于计算已经在卫生设施接种过疫苗的儿童(以服务为基础的覆盖率);(ii)存活婴儿,用于计算所有符合条件的儿童(以人口为基础的覆盖率)。使用调查模型估计的95%置信区间(ci)、类内相关系数(ICC)和Bland-Altman (BA)图评估一致性。结果:在55个(89%)和39个(63%)副县中,调查模型估计与基于人口和基于服务的覆盖率估计相比存在很大差异。不同的方法在基于调查模型的覆盖率估计与基于人口的覆盖率估计(ICC: 0.10, p = 0.229)和基于调查模型的覆盖率估计与基于服务的覆盖率估计(ICC: 0.42, p = p =结论:基于调查模型的、常规人口的和基于服务的覆盖率估计之间的巨大差异暴露了每种方法结果的重要差异。虽然所有方法都提供不同的见解,但改进调查模型、常规数据质量和改进人口集水区估计对于可靠的小规模疫苗交付监测至关重要。
{"title":"Concordance of coverage estimates from routine and survey data of measles second dose vaccine in Western Kenya.","authors":"Angela K Moturi, Moses M Musau, Samuel K Muchiri, Peter M Macharia, Robert W Snow, Emelda A Okiro","doi":"10.3389/fepid.2025.1663372","DOIUrl":"10.3389/fepid.2025.1663372","url":null,"abstract":"<p><strong>Background: </strong>Missed opportunities for key vaccinations continue to exacerbate disease outbreaks. Accurately monitoring immunisation coverage is fundamental to identifying gaps in vaccine delivery and informing timely action. This study assesses the agreement between routine and survey-based coverage estimates for the second dose of the measles vaccine (MCV2) in Western Kenya.</p><p><strong>Methods: </strong>This study utilised model-based geostatistics estimates MCV2 coverage from the 2022 Kenya Demographic and Health Survey (DHS), monthly immunisation data from routine health information systems (2019-2022) imputed for missingness and population data from WorldPop for 2019 across 62 Western Kenyan subnational areas (sub-counties). Routine MCV2 coverage was computed using MCV2 doses as a numerator and two separate denominators: (i) Pentavalent 1 doses to account for children already receiving prior vaccines at health facilities (service-based coverage) and (ii) surviving infants to account for all eligible children (population-based coverage). Concordance was assessed using the 95% confidence intervals (CIs) of survey-modelled estimates, intra-class correlation coefficient (ICC), and Bland-Altman (BA) plots.</p><p><strong>Results: </strong>Survey-modelled estimates differed substantially in 55 (89%) and 39 (63%) sub-counties compared to population and service-based coverage estimates respectively. The different approaches showed poor congruence in survey-modelled vs. population-based coverage estimates (ICC: 0.10, <i>p</i> = 0.229) and survey-modelled vs. service-based coverage estimates (ICC: 0.42, <i>p</i> = <0.001); there was moderate congruence of population vs. service-based coverage estimates (ICC: 0.65, <i>p</i> = <0.001). Survey-modelled vs. population-based coverage estimates showed the highest bias in BA plots of 18.80 percent points (p.p) compared to 11.02 p.p. and 7.79 p.p. between survey-modelled vs. service-based coverage and population vs. service-based coverage estimates, respectively.</p><p><strong>Conclusions: </strong>Substantial discrepancies among survey-modelled, routine population, and service-based coverage estimates expose important variations in each approaches' results. While all approaches offer distinct insights, improving survey models, routine data quality and refining estimates of population catchment is imperative for reliable fine-scale vaccine delivery monitoring.</p>","PeriodicalId":73083,"journal":{"name":"Frontiers in epidemiology","volume":"5 ","pages":"1663372"},"PeriodicalIF":0.0,"publicationDate":"2025-09-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12460269/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145187567","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mapping climate change-driven epidemics. 绘制气候变化导致的流行病地图。
Pub Date : 2025-07-29 eCollection Date: 2025-01-01 DOI: 10.3389/fepid.2025.1605058
Allyson Murray, Anna Ignaszak

The recent analysis by Mora and colleagues revealed that over 277 diseases can worsen due to climatic hazards resulting from greenhouse gas emissions. Specifically, more than 58% of known human diseases can be aggravated by climate change. Furthermore, there are over 1,000 pathways through which various climatic hazards have contributed to disease outbreaks, primarily due to the diversity of pathogens. This analysis also urges immediate action to address the root of the problem-reducing greenhouse gas (GHG) emissions. Numerous climatic hazards affect the incidence of human pathogenic diseases. Unfortunately, due to the complexity and multifaceted nature of the problem, there cannot be a single comprehensive solution to minimize climate-driven outbreaks. This study seeks to identify outbreaks of specific diseases categorized as epidemics, whose incidence is strongly correlated with global warming. The focus of this analysis is on (1) organizations responding to climate-related diseases to decelerate the incidence rates; (2) to call for a new disciplines in epidemiology that focuses exclusively on climate change-related prediction for future pandemics; (3) looking at the problem from the patient's point of view-how do non-medical/health professionals contribute to minimizing the spread of climate-related diseases?; (4) to analyze outbreaks vs. urbanization/pollution/increase in population density and public health policies; also (5) to verify the vaccination coverage vs. case reduction rate.

Mora及其同事最近的分析显示,超过277种疾病可能因温室气体排放造成的气候危害而恶化。具体而言,超过58%的已知人类疾病可因气候变化而恶化。此外,主要由于病原体的多样性,各种气候灾害造成疾病爆发的途径有1 000多种。该分析还敦促立即采取行动解决问题的根源——减少温室气体(GHG)排放。许多气候灾害影响着人类致病性疾病的发病率。不幸的是,由于这一问题的复杂性和多面性,不可能有单一的综合解决办法来尽量减少气候导致的疫情。这项研究旨在确定被归类为流行病的特定疾病的爆发,其发病率与全球变暖密切相关。本分析的重点是(1)应对气候相关疾病的组织,以降低发病率;(2)呼吁建立一个新的流行病学学科,专门研究与气候变化有关的未来流行病预测;(3)从患者的角度看待问题——非医疗/卫生专业人员如何为尽量减少气候相关疾病的传播做出贡献?(4)分析疫情与城市化/污染/人口密度增加和公共卫生政策的关系;还(5)核实疫苗接种覆盖率与病例减少率。
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引用次数: 0
Cognitively-plausible reinforcement learning in epidemiological agent-based simulations. 基于流行病学代理的模拟中认知似是而非的强化学习。
Pub Date : 2025-07-28 eCollection Date: 2025-01-01 DOI: 10.3389/fepid.2025.1563731
Konstantinos Mitsopoulos, Lawrence Baker, Christian Lebiere, Peter Pirolli, Mark Orr, Raffaele Vardavas

Introduction: Human behavior shapes the transmission of infectious diseases and determines the effectiveness of public health measures designed to mitigate transmission. To accurately reflect these dynamics, epidemiological simulation models should endogenously account for both disease transmission and behavioral dynamics. Traditional agent-based models (ABMs) often rely on simplified rules to represent behavior, limiting their ability to capture complex decision-making processes and cognitive dynamics.

Methods: Reinforcement Learning (RL) provides a framework for modeling how agents adapt their behavior based on experience and feedback. However, implementing cognitively plausible RL in ABMs is challenging due to high-dimensional state spaces. We propose a novel framework based on Adaptive Control of Thought-Rational (ACT-R) principles and Instance-Based Learning (IBL), which enables agents to dynamically adapt their behavior using nonparametric RL without requiring extensive training on large datasets.

Results: To demonstrate this framework, we model mask-wearing behavior during the COVID-19 pandemic, highlighting how individual decisions and social network structures influence disease transmission. Simulations reveal that local social cues drive tightly clustered masking behavior (slope = 0.54, Pearson r = 0.76), while reliance on global cues alone produces weakly disassortative patterns (slope = 0.05, Pearson r = 0.09), underscoring the role of local information in coordinating public health compliance.

Discussion: Our results show that this framework provides a scalable and cognitively interpretable approach to integrating adaptive decision-making into epidemiological simulations, offering actionable insights for public health policy.

导言:人类行为决定了传染病的传播,并决定了旨在减轻传播的公共卫生措施的有效性。为了准确地反映这些动态,流行病学模拟模型应该内生地考虑疾病传播和行为动态。传统的基于主体的模型(ABMs)通常依赖于简化的规则来表示行为,限制了它们捕捉复杂决策过程和认知动态的能力。方法:强化学习(RL)为智能体如何根据经验和反馈调整其行为提供了一个建模框架。然而,由于高维状态空间,在ABMs中实现认知上合理的强化学习是具有挑战性的。我们提出了一个基于思维理性自适应控制(ACT-R)原则和基于实例的学习(IBL)的新框架,该框架使智能体能够使用非参数强化学习动态适应其行为,而无需在大数据集上进行大量训练。结果:为了证明这一框架,我们对COVID-19大流行期间的戴口罩行为进行了建模,突出了个人决策和社会网络结构如何影响疾病传播。模拟结果显示,局部社会线索驱动紧密聚集的掩蔽行为(斜率= 0.54,Pearson r = 0.76),而仅依赖全局线索产生弱失配模式(斜率= 0.05,Pearson r = 0.09),强调了局部信息在协调公共卫生合规中的作用。讨论:我们的研究结果表明,该框架提供了一种可扩展和认知解释的方法,将适应性决策整合到流行病学模拟中,为公共卫生政策提供可操作的见解。
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引用次数: 0
The impact of using self-report versus objective measures of cardiometabolic conditions in epidemiologic research: a case study from India using data from the longitudinal aging study in India. 流行病学研究中使用自我报告与客观测量心脏代谢状况的影响:来自印度的案例研究,使用印度纵向老龄化研究的数据。
Pub Date : 2025-07-25 eCollection Date: 2024-01-01 DOI: 10.3389/fepid.2024.1372972
Emma Nichols, Peifeng Hu, David E Bloom, Jinkook Lee, T V Sekher

Introduction: In low- and middle-income countries, self-reported data on chronic cardiometabolic conditions such as high blood pressure and diabetes are commonly used in large-scale epidemiologic studies because implementing objective measures is challenging in these contexts. However, existing evidence suggests that the sensitivity of such measures may be low, and performance may differ by factors such as age, education, or income. We sought to confirm these prior findings and assess bias due to the use of self-reported data in hypothetical epidemiologic studies considering high blood pressure and diabetes as exposures, outcomes, and confounders.

Methods: We used data from the Longitudinal Aging Study in India (analytic N = 55,392) to assess the performance of self-reported data on high blood pressure and diabetes compared with objective measures, overall and stratified by basic demographic factors. We then compared regression coefficients from models considering self-reported and objective high blood pressure and diabetes as exposures, outcomes, and confounders. In all models, we examined whether the mode of data collection (self-report or objective) for other key variables in the model affected results.

Results: The overall sensitivity of self-reported high blood pressure and diabetes was 0.514 and 0.570, respectively; specificity for the two conditions was 0.922 and 0.984. Sensitivity of both conditions increased with age, and was higher among women, those in urban settings, and those with higher educational attainment. Across almost all models considering high blood pressure and diabetes as either exposures or outcomes anti-conservative bias was observed when using self-reported vs. objective measures, regardless of the mode of data collection for other key variables. When high blood pressure and diabetes were considered as confounders, differences between using self-report and objective measures were minimal.

Discussion: Anti-conservative bias due to the use of self-reported measures of chronic cardiometabolic conditions in surveys conducted in low- and middle-income contexts may be common. Future studies may seek to quantify the magnitude of anticipated bias in existing data resources and use quantitative bias analysis to formally estimate the potential implications of misclassification.

在低收入和中等收入国家,关于慢性心脏代谢疾病(如高血压和糖尿病)的自我报告数据通常用于大规模流行病学研究,因为在这些情况下实施客观措施具有挑战性。然而,现有证据表明,这些措施的敏感性可能较低,而且表现可能因年龄、教育或收入等因素而异。我们试图证实这些先前的发现,并评估由于在假设的流行病学研究中使用自我报告的数据而产生的偏倚,这些研究将高血压和糖尿病作为暴露、结果和混杂因素。方法:我们使用来自印度纵向老龄化研究的数据(分析N = 55,392)来评估高血压和糖尿病自我报告数据与客观测量数据的表现,并根据基本人口统计学因素进行总体和分层。然后,我们比较了考虑自我报告和客观高血压和糖尿病作为暴露、结果和混杂因素的模型的回归系数。在所有模型中,我们检查了模型中其他关键变量的数据收集模式(自我报告或客观)是否影响结果。结果:自述高血压和糖尿病的总体敏感性分别为0.514和0.570;两种情况的特异性分别为0.922和0.984。对这两种情况的敏感性随着年龄的增长而增加,在女性、城市环境和受教育程度较高的人群中更高。在几乎所有将高血压和糖尿病作为暴露或结果的模型中,无论其他关键变量的数据收集模式如何,当使用自我报告与客观测量时,都观察到反保守偏差。当高血压和糖尿病被认为是混杂因素时,使用自我报告和客观测量之间的差异很小。讨论:在低收入和中等收入背景下进行的调查中,由于使用慢性心脏代谢疾病的自我报告措施而导致的反保守偏见可能是常见的。未来的研究可能会寻求量化现有数据资源中预期偏差的程度,并使用定量偏差分析来正式估计错误分类的潜在影响。
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引用次数: 0
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Frontiers in epidemiology
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