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Diagnostic and prognostic potential of plasma and sputum thrombomodulin in bacterial community-acquired pneumonia. 血浆和痰血栓调节蛋白在细菌性社区获得性肺炎中的诊断和预后潜力。
IF 2.3 Pub Date : 2025-11-01 Epub Date: 2025-07-18 DOI: 10.1080/23744235.2025.2528957
Helena Alpkvist, Simon Athlin, Anna Norrby-Teglund, Kristoffer Strålin

Background: Soluble thrombomodulin, a marker of endothelial cell injury, is released into the circulation during endothelial damage and has been observed at elevated concentrations in bacterial infections. This study aimed to investigate the correlation of thrombomodulin concentrations in plasma and sputum with disease severity and etiology in bacterial community-acquired pneumonia (CAP).

Methods: A prospective study was conducted on adults hospitalized with radiologically confirmed bacterial CAP. Plasma and sputum samples were collected upon admission, and thrombomodulin concentrations were quantified using an enzyme-linked immunosorbent assay. The study included a multivariate analysis to assess whether thrombomodulin concentrations were associated with disease severity and/or bacterial etiology.

Results: Of 111 patients with bacterial CAP, including 15 with severe CAP (as defined by the American Thoracic Society/Infectious Diseases Society of America criteria) and 63 with pneumococcal etiology, thrombomodulin was measured in plasma in all patients and in sputum in 42 patients. Elevated plasma thrombomodulin concentrations were independently associated with severe CAP. Stratification by bacterial etiology showed that higher plasma thrombomodulin concentrations were linked to severe pneumonia only in patients with pneumococcal infection. The area under the receiver operating characteristic curve for detecting severe pneumococcal CAP was 0.87. Conversely, sputum thrombomodulin concentrations showed no association with disease severity or bacterial etiology.

Conclusions: Plasma thrombomodulin is a promising biomarker for identifying severe pneumococcal CAP. Sputum thrombomodulin did not correlate with disease severity or bacterial etiology. These findings support further investigation into the diagnostic and prognostic role of plasma thrombomodulin in bacterial infections.

背景:可溶性血栓调节蛋白是内皮细胞损伤的标志物,在内皮损伤过程中释放到血液循环中,并且在细菌感染中观察到其浓度升高。本研究旨在探讨细菌性社区获得性肺炎(CAP)患者血浆和痰中血栓调节蛋白浓度与疾病严重程度和病因的相关性。方法:对放射学证实的细菌性CAP住院的成人进行前瞻性研究。入院时收集血浆和痰样本,并使用酶联免疫吸附法定量血栓调节蛋白浓度。该研究包括一项多变量分析,以评估血栓调节素浓度是否与疾病严重程度和/或细菌病因相关。结果:在111例细菌性CAP患者中,包括15例重度CAP(根据美国胸科学会/美国传染病学会的标准定义)和63例肺炎球菌病因,所有患者的血浆和42例患者的痰中均检测到血栓调节蛋白。血浆血栓调节蛋白浓度升高与严重CAP独立相关。细菌性病因分层研究显示,血浆血栓调节蛋白浓度升高仅与肺炎球菌感染患者的严重肺炎相关。检测重症肺炎球菌CAP的受试者工作特征曲线下面积为0.87。相反,痰血栓调节蛋白浓度与疾病严重程度或细菌病因无关。结论:血浆凝血调节蛋白是鉴别严重肺炎球菌CAP的有希望的生物标志物。痰凝血调节蛋白与疾病严重程度或细菌病因无关。这些发现支持进一步研究血浆血栓调节蛋白在细菌感染中的诊断和预后作用。
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引用次数: 0
How can behavioural studies in vector control programme & Kala-azar Mukt Panchayat initiative contribute towards ending visceral leishmaniasis in India? 病媒控制规划中的行为研究和黑热病行动如何有助于在印度消灭内脏利什曼病?
IF 2.3 Pub Date : 2025-11-01 Epub Date: 2025-09-18 DOI: 10.1080/23744235.2025.2558169
Gaurav Raj Dwivedi, Brij Ranjan Misra, Pradeep Kumar Srivastava, Nalini Mishra
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引用次数: 0
Measures against SARS-CoV-2 in Sweden were more efficient against rhinovirus infections in older adults than in children: a molecular epidemiology perspective. 瑞典针对SARS-CoV-2的措施对老年人鼻病毒感染比儿童更有效:分子流行病学的观点。
IF 2.3 Pub Date : 2025-11-01 Epub Date: 2025-06-13 DOI: 10.1080/23744235.2025.2516656
Marianela Patzi-Churqui, Hao Wang, Timur Tunovic, Fredy Saguti, Karolina Rembeck, Kristina Nyström, Magnus Lindh, Heléne Norder

Background: Acute respiratory infections (ARIs) are a major global health concern, particularly for children and the elderly. Although rhinoviruses are the primary pathogens causing ARIs, their epidemiology during reduced population mobility and behavioral changes is not well understood. This study aimed to assess whether the Swedish COVID-19 measures changed the epidemiology of Rhinovirus and ARI-causing viruses other than SARS-CoV-2 in the western part of Sweden in 2020.

Methods: A total of 13,791 nasopharyngeal samples from ARI-patients were analyzed for 19 different viruses and bacteria by qPCR. Of the 3,607 samples positive for any virus, 2,018 were positive for rhinovirus (RV) and enterovirus (EV), and 106 contained adenoviruses. Among the EV/RV reactive samples, 249 strains were typed using partial sequencing of 5'UTR and 204 by VP1 or VP4-VP2.

Results: After week 12 when the interventions were implemented, most of the ARI-causing viruses were EV/RV and adenoviruses, besides SARS-CoV-2. In September-October 2020, an outbreak caused by RV-A strains predominantly infected children younger than 13 years and individuals within the age range of their parents. RV-A strains were identified in 118 of 242 (49%) RV-positive samples, followed by RV-C (36%) and RV-B (10%). Before the first wave of SARS-CoV-2, a RV-C outbreak affected all age groups.

Conclusions: This study shows that the moderate Swedish interventions against SARS-CoV-2 were more effective against the spread of ARI-causing virus among adults over 56 years than among young children. These results suggest the need for new strategies for preventing the spread of ARI pathogens like RV and EV, which cause disease in all age groups and can lead to large outbreaks.

背景:急性呼吸道感染(ARIs)是一个主要的全球健康问题,特别是对儿童和老年人。虽然鼻病毒是引起急性呼吸道感染的主要病原体,但在人口流动减少和行为改变期间,其流行病学尚不清楚。本研究旨在评估2020年瑞典COVID-19措施是否改变了瑞典西部地区鼻病毒和非SARS-CoV-2引起ari的病毒的流行病学。方法:采用qPCR方法对13791份ari患者鼻咽标本进行19种不同病毒和细菌的检测。在所有病毒呈阳性的3607份样本中,2018份呈鼻病毒(RV)和肠病毒(EV)阳性,106份含有腺病毒。在EV/RV反应样品中,249株通过5′utr部分测序分型,204株通过VP1或VP4-VP2分型。结果:干预措施实施第12周后,除SARS-CoV-2外,引起急性呼吸道感染的病毒主要为EV/RV和腺病毒。2020年9月至10月,由RV-A毒株引起的疫情主要感染了13岁以下儿童及其父母年龄范围内的个人。242份rv阳性样本中检出RV-A株118份(49%),其次是RV-C(36%)和RV-B(10%)。在第一波SARS-CoV-2之前,所有年龄组都发生了RV-C疫情。结论:这项研究表明,瑞典针对SARS-CoV-2的适度干预措施对56岁以上成人中引起ari的病毒的传播比在幼儿中更有效。这些结果表明,需要制定新的战略来预防RV和EV等ARI病原体的传播,这些病原体可在所有年龄组中引起疾病,并可能导致大规模暴发。
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引用次数: 0
Comparison of HANDOC and Chamat-Hedemand's risk stratification systems for predicting infective endocarditis among patients with non-beta-hemolytic streptococci blood stream infections. HANDOC和Chamat-Hedemand风险分层系统预测非溶血性链球菌血流感染患者感染性心内膜炎的比较
IF 2.3 Pub Date : 2025-11-01 Epub Date: 2025-06-06 DOI: 10.1080/23744235.2025.2513537
Gustav Pernow, Frida Eriksson, Torgny Sunnerhagen, Magnus Rasmussen

Background: Non-β-hemolytic streptococci (NBHS) cause blood stream infections (BSI) which can be complicated by infective endocarditis (IE). To stratify the risk for IE in NBHS BSI and to guide the use of echocardiography in this condition, two risk stratification systems (RSSs), the HANDOC score (HANDOC), and the Chamat-Hedemand algorithm (CH-A) have been developed.

Objectives: To compare the sensitivity and the specificity of HANDOC and CH-A and to describe how the utilization of transesophageal echocardiography (TEE) would be affected using either HANDOC or CH-A.

Methods: A retrospective, population-based cohort study of patients with blood cultures positive for NBHS during 2018 was performed. Medical records of the included patients were studied for classification of the episodes according to HANDOC, CH-A, and the Duke-ISCVID criteria.

Results: Three hundred and twenty-five episodes of NBHS BSIs involving 308 patients were included. Twenty-one episodes (6.5%) met the Duke-ISCVID criteria for definite IE. TEE was performed in 26% of episodes. HANDOC had a sensitivity of 95% and a specificity of 73% for definite IE whereas CH-A had a sensitivity of 90% and a specificity of 63%. The CH-A outcome 'any echocardiography' had a sensitivity of 100% for definite IE, but the specificity was only 24%. In this cohort, implementation of the RSSs would lead to an increase in the utilization of TEE compared to the real-life use, both when using HANDOC (+22%) and CH-A (+60%).

Conclusion: HANDOC had the highest combined sensitivity and sensitivity for IE. The utilization of TEE would increase using these RSSs, especially the CH-A.

背景:非β溶血性链球菌(Non-β-hemolytic streptococcus, NBHS)可引起血流感染(blood stream infections, BSI),并发感染性心内膜炎(infectiveendocarditis, IE)。为了对NBHS BSI患者的IE风险进行分层,并指导超声心动图在这种情况下的应用,我们开发了两种风险分层系统(rss),即HANDOC评分(HANDOC)和Chamat-Hedemand算法(CH-A)。目的:比较HANDOC和CH-A的敏感性和特异性,并描述HANDOC和CH-A对经食管超声心动图(TEE)应用的影响。方法:对2018年血液培养呈NBHS阳性的患者进行回顾性、基于人群的队列研究。根据HANDOC、CH-A和Duke-ISCVID标准对纳入患者的医疗记录进行分类。结果:308例患者共325例NBHS BSIs。21例(6.5%)符合Duke-ISCVID明确IE标准。26%的患者接受TEE治疗。对于明确的IE, HANDOC的敏感性为95%,特异性为73%,而CH-A的敏感性为90%,特异性为63%。CH-A结果“任何超声心动图”对明确的IE的敏感性为100%,但特异性仅为24%。在这个队列中,与实际使用相比,rss的实施将导致TEE利用率的增加,无论是在使用HANDOC(+22%)还是CH-A(+60%)时。结论:HANDOC对IE的综合灵敏度和敏感性最高。使用这些rss,特别是CH-A, TEE的利用率将会增加。
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引用次数: 0
Assessment of Chlamydia trachomatis testing in Sweden 2016-2023 and the incidence of associated complications. 2016-2023年瑞典沙眼衣原体检测及相关并发症发生率评估
IF 2.3 Pub Date : 2025-11-01 Epub Date: 2025-06-30 DOI: 10.1080/23744235.2025.2523593
Siri Westborg, Karin Elfving, Ylva Lindroth, Lisa Stark, Karolina Gullsby, Åsa Gylfe, Björn Herrmann

Background: This study aimed to assess chlamydia diagnostics in different clinic types, including internet-based self-sampling (IBSS). Furthermore, we investigated the incidence of chlamydia-associated complications.

Methods: Data on Chlamydia trachomatis (CT) testing were retrieved from six healthcare regions in the years 2016-2023 across different categories of testing facilities. National data on CT diagnostics and number of PID, ectopic pregnancy and infertility cases were obtained from Swedish health authorities.

Results: The number of CT cases detected through IBSS increased by 85% from 2016 (n = 1967) to 2023 (n = 3644) when it accounted for 43% of all cases. The proportion of CT-positive individuals of all tested persons was similar for IBSS (7.0-8.5% per year); STI clinics (8.5-9.9%) and youth clinics (9.7-10.9%). In contrast, gynaecology clinics had a low proportion of CT-positive individuals (1.8-2.3%), and primary healthcare clinics a decreasing proportion (2016: 4.8%; 2023: 3.0%). For women in Sweden aged 15-39 years, there was a 33% decrease in detected CT cases from 2008 to 2022 (1577-1048 cases/100,000 women) while PID rates decreased by 63% from 2008 to 2022 (224-83 cases/100,000 women).

Conclusions: IBSS has become the most important CT case detector in Sweden. Primary care and gynaecology clinics have low positivity rates. The decrease in PID rates may be due to generous CT testing, although other explanations are possible. Considering the low positivity rates in some clinic types and that asymptomatic CT cases have a low PID rate a reduced testing may be justified.

背景:本研究旨在评估不同临床类型的衣原体诊断,包括基于互联网的自采样(IBSS)。此外,我们调查了衣原体相关并发症的发生率。方法:检索2016-2023年6个卫生保健地区不同类别检测设施的沙眼衣原体(CT)检测数据。从瑞典卫生当局获得了CT诊断和PID、异位妊娠和不孕症病例数的国家数据。结果:从2016年(n = 1967)到2023年(n = 3644), IBSS检测到的CT病例数增加了85%,占所有病例的43%。在IBSS中,所有被测者中ct阳性个体的比例相似(每年7.0-8.5%);性传播感染诊所(8.5-9.9%)和青少年诊所(9.7-10.9%)。相比之下,妇科诊所的ct阳性个体比例较低(1.8-2.3%),初级保健诊所的比例下降(2016年:4.8%;2023年:3.0%)。瑞典15-39岁的女性,从2008年到2022年,CT检出病例减少33%(1577-1048例/10万名女性),而PID率从2008年到2022年下降63%(224-83例/10万名女性)。结论:IBSS已成为瑞典最重要的CT病例检测器。初级保健和妇科诊所的阳性率很低。PID率的降低可能是由于大量的CT检查,尽管其他解释也是可能的。考虑到一些临床类型的低阳性率和无症状CT病例的低PID率,减少检测可能是合理的。
{"title":"Assessment of <i>Chlamydia trachomatis</i> testing in Sweden 2016-2023 and the incidence of associated complications.","authors":"Siri Westborg, Karin Elfving, Ylva Lindroth, Lisa Stark, Karolina Gullsby, Åsa Gylfe, Björn Herrmann","doi":"10.1080/23744235.2025.2523593","DOIUrl":"10.1080/23744235.2025.2523593","url":null,"abstract":"<p><strong>Background: </strong>This study aimed to assess chlamydia diagnostics in different clinic types, including internet-based self-sampling (IBSS). Furthermore, we investigated the incidence of chlamydia-associated complications.</p><p><strong>Methods: </strong>Data on <i>Chlamydia trachomatis</i> (CT) testing were retrieved from six healthcare regions in the years 2016-2023 across different categories of testing facilities. National data on CT diagnostics and number of PID, ectopic pregnancy and infertility cases were obtained from Swedish health authorities.</p><p><strong>Results: </strong>The number of CT cases detected through IBSS increased by 85% from 2016 (<i>n</i> = 1967) to 2023 (<i>n</i> = 3644) when it accounted for 43% of all cases. The proportion of CT-positive individuals of all tested persons was similar for IBSS (7.0-8.5% per year); STI clinics (8.5-9.9%) and youth clinics (9.7-10.9%). In contrast, gynaecology clinics had a low proportion of CT-positive individuals (1.8-2.3%), and primary healthcare clinics a decreasing proportion (2016: 4.8%; 2023: 3.0%). For women in Sweden aged 15-39 years, there was a 33% decrease in detected CT cases from 2008 to 2022 (1577-1048 cases/100,000 women) while PID rates decreased by 63% from 2008 to 2022 (224-83 cases/100,000 women).</p><p><strong>Conclusions: </strong>IBSS has become the most important CT case detector in Sweden. Primary care and gynaecology clinics have low positivity rates. The decrease in PID rates may be due to generous CT testing, although other explanations are possible. Considering the low positivity rates in some clinic types and that asymptomatic CT cases have a low PID rate a reduced testing may be justified.</p>","PeriodicalId":73372,"journal":{"name":"Infectious diseases (London, England)","volume":" ","pages":"1048-1058"},"PeriodicalIF":2.3,"publicationDate":"2025-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144531349","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Trough levels of dalbavancin during long-term treatment of prosthetic joint infections. 长期治疗假体关节感染期间达尔巴伐辛的低谷水平。
IF 2.3 Pub Date : 2025-10-01 Epub Date: 2025-05-04 DOI: 10.1080/23744235.2025.2499144
Bo Söderquist, Max Möller, Samira Salihovic

Introduction: Dalbavancin is a lipoglycopeptide with an exceptionally long half-life that allows simplified administration, which may be of value in long-term treatment of bone and joint infections, such as prosthetic joint infections (PJIs). The objective was to determine trough (Cmin) values of dalbavancin during long-term PJI treatment according to the recommendation of the Swedish National Guidelines for Bone and Joint Infections: a loading dose of 1,500 mg on day 1 and another 1,500 mg on days 8-14, followed by day 28 administration of 1,000 mg every two weeks or 500 mg per week.

Patients/methods: Twelve patients with PJI treated with at least six doses of dalbavancin were prospectively followed up, serum samples were collected, and renal function was investigated. Dalbavancin concentrations were measured using ultra-high pressure liquid chromatography coupled with unispray tandem mass spectrometry (UHPLC-MS/MS).

Results: The median serum concentration (Cmin) 14 days after the first 1,500 mg dose was 36.3 mg/L (range: 6.6-62.4 mg/L). The median trough value at the date of the last given dose (1,000 mg) after a total of 6-7 doses was 53.6 mg/L (range: 32.0-97.5 mg/L). Three patients showed a tendency towards successive accumulation of dalbavancin during treatment. None of the patients showed any significant impairment in renal function.

Conclusions: Therapeutic drug monitoring during long-term dalbavancin treatment is recommended to avoid the risk of accumulation and unnecessarily high trough levels. In many cases, such monitoring can allow the dosing interval to be extended.

Dalbavancin是一种脂糖肽,半衰期特别长,可以简化给药,在骨和关节感染(如假体关节感染(PJIs))的长期治疗中可能有价值。目的是根据瑞典国家骨和关节感染指南的建议,确定长期PJI治疗期间达巴文星的槽(Cmin)值:第1天的负荷剂量为1,500 mg,第8-14天的负荷剂量为1,500 mg,随后第28天每两周给药1,000 mg或每周给药500 mg。患者/方法:对12例PJI患者进行至少6次达尔巴文星治疗的前瞻性随访,采集血清样本,并进行肾功能调查。采用超高压液相色谱-串联质谱法(UHPLC-MS/MS)测定Dalbavancin的浓度。结果:第一次1500mg给药后14天血清中位浓度(Cmin)为36.3 mg/L(范围:6.6 ~ 62.4 mg/L)。在总共6-7次给药后,最后一次给药(1,000 mg)日的中位谷值为53.6 mg/L(范围:32.0-97.5 mg/L)。3例患者在治疗过程中表现出达尔巴万辛连续积累的趋势。所有患者均未出现明显的肾功能损害。结论:建议在长期达巴文星治疗期间监测治疗药物,以避免积累风险和不必要的高低谷水平。在许多情况下,这种监测可以延长给药间隔。
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引用次数: 0
SARS-CoV-2 XFG: a genomic insight into the new recombinant. SARS-CoV-2 XFG:对新重组病毒的基因组分析
IF 2.3 Pub Date : 2025-10-01 Epub Date: 2025-08-21 DOI: 10.1080/23744235.2025.2548552
Francesco Branda, Massimo Ciccozzi, Fabio Scarpa
{"title":"SARS-CoV-2 XFG: a genomic insight into the new recombinant.","authors":"Francesco Branda, Massimo Ciccozzi, Fabio Scarpa","doi":"10.1080/23744235.2025.2548552","DOIUrl":"10.1080/23744235.2025.2548552","url":null,"abstract":"","PeriodicalId":73372,"journal":{"name":"Infectious diseases (London, England)","volume":" ","pages":"1017-1020"},"PeriodicalIF":2.3,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144981339","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Management of community-acquired pneumonia in immunocompetent adults: updated Swedish guidelines. 免疫功能正常成人社区获得性肺炎的管理:瑞典最新指南
IF 2.3 Pub Date : 2025-10-01 Epub Date: 2025-08-20 DOI: 10.1080/23744235.2025.2543077
Martina Wahllöf, Jonas Hedlund, Anders Lundqvist, Anna C Nilsson, Malin Inghammar, Carl Spindler, Pontus Nauclér, Simon Athlin
{"title":"Management of community-acquired pneumonia in immunocompetent adults: updated Swedish guidelines.","authors":"Martina Wahllöf, Jonas Hedlund, Anders Lundqvist, Anna C Nilsson, Malin Inghammar, Carl Spindler, Pontus Nauclér, Simon Athlin","doi":"10.1080/23744235.2025.2543077","DOIUrl":"10.1080/23744235.2025.2543077","url":null,"abstract":"","PeriodicalId":73372,"journal":{"name":"Infectious diseases (London, England)","volume":" ","pages":"979-1015"},"PeriodicalIF":2.3,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144981256","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dynamics of SARS-CoV-2 variants and mutations in Central Sweden between 2023 and 2024 and their potential implications on monoclonal antibodies pemivibart and sipavibart as PrEP in the region. 2023年至2024年瑞典中部SARS-CoV-2变异和突变的动态及其对该地区单克隆抗体培米韦巴特和西帕韦巴特作为PrEP的潜在影响
IF 2.3 Pub Date : 2025-10-01 Epub Date: 2025-05-26 DOI: 10.1080/23744235.2025.2509011
Jonathan Haars, Frans Wallin, Karin Elfving, Anna-Karin Jonsson, Patrik Ellström, Paula Mölling, Johan Lindh, Hong Yin, Martin Sundqvist, René Kaden, Navaneethan Palanisamy, Johan Lennerstrand

Background: Monoclonal antibodies (mAbs) are an important option against SARS-CoV-2, especially as pre-exposure prophylaxis (PrEP) for patients with immune system impairment. PrEP mAbs like sipavibart and pemivibart have been approved for limited use in several countries. Certain SARS-CoV-2 variants carry mutations in the spike (S) protein, conferring resistance to these mAbs.

Objectives: We aimed to examine the relative abundance of different circulating SARS-CoV-2 variants/mutations in central Sweden between 2023 and 2024, and to predict the effectiveness of sipavibart and pemivibart.

Methods: An amplicon-based Nanopore sequencing method was used for sequencing SARS-CoV-2 samples. Coronapp was used to identify mutations in these sequences. Using the published in vitro resistance data for sipavibart and pemivibart, the effectiveness of these mAbs was inferred.

Results: We have observed that the relative abundance of the KP.3.1.1 variant and the Q493E mutation started to increase in the later part of 2024 in the region. Also, since April 2024, the relative abundance of the F456L mutation reached 100% during many weeks until the end of the study period. The KP.3.1.1 variant is significantly resistant to pemivibart. Further, the presence of the F456L mutation in the Omicron subvariants confers high fold resistance towards sipavibart.

Conclusion: The use of sipavibart or pemivibart as PrEP for COVID-19 in the region may currently not be effective unless new SARS-CoV-2 variants appear not containing these resistance mutations. Further, new mAbs under development as PrEP for COVID-19 can be effectively used by routinely sequencing SARS-CoV-2 in patients to identify variants and resistance mutations.

背景:单克隆抗体(mab)是对抗SARS-CoV-2的重要选择,特别是作为免疫系统损伤患者的暴露前预防(PrEP)。PrEP单克隆抗体如sipavibart和pemivibart已在一些国家被批准有限使用。某些SARS-CoV-2变体携带刺突(S)蛋白突变,从而对这些单克隆抗体产生耐药性。目的:研究2023年至2024年间瑞典中部不同流行SARS-CoV-2变体/突变的相对丰度,并预测西帕韦巴特和培米韦巴特的有效性。方法:采用基于扩增子的纳米孔测序方法对SARS-CoV-2样品进行测序。Coronapp用于识别这些序列中的突变。利用已发表的sipavibart和pemivibart的体外耐药数据,推断这些单克隆抗体的有效性。结果:我们观察到该地区KP.3.1.1变异和Q493E突变的相对丰度在2024年下半年开始增加。此外,自2024年4月以来,在研究期结束前的许多周内,F456L突变的相对丰度达到100%。KP.3.1.1变异对培米韦bart有明显的耐药性。此外,Omicron亚变体中F456L突变的存在赋予了对sipavibart的高倍抗性。结论:除非出现不含这些耐药突变的新SARS-CoV-2变异体,否则在该地区使用西帕韦巴特或培米韦巴特作为COVID-19的PrEP可能目前无效。此外,正在开发的新单克隆抗体作为COVID-19的PrEP,可以通过对患者的SARS-CoV-2进行常规测序来有效地使用,以识别变体和耐药突变。
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引用次数: 0
Avian influenza outbreak in Cambodia: a public health concern. 柬埔寨爆发禽流感:一个公共卫生问题。
IF 2.3 Pub Date : 2025-10-01 Epub Date: 2025-07-30 DOI: 10.1080/23744235.2025.2540987
Muhammad Abdullah Ali, Alishba Hameed, Umama Alam, Zaryab Bacha, Ahmad Khan, Sangeen Khan
{"title":"Avian influenza outbreak in Cambodia: a public health concern.","authors":"Muhammad Abdullah Ali, Alishba Hameed, Umama Alam, Zaryab Bacha, Ahmad Khan, Sangeen Khan","doi":"10.1080/23744235.2025.2540987","DOIUrl":"10.1080/23744235.2025.2540987","url":null,"abstract":"","PeriodicalId":73372,"journal":{"name":"Infectious diseases (London, England)","volume":" ","pages":"975-976"},"PeriodicalIF":2.3,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144755273","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Infectious diseases (London, England)
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