首页 > 最新文献

Advances in Virology最新文献

英文 中文
Confirmatory Virucidal Activity of Ionised Active Water S-100® on the SARS-CoV-2 Virus. 离子活性水S-100®对SARS-CoV-2病毒的杀病毒活性验证
IF 2.2 Q4 VIROLOGY Pub Date : 2022-06-17 eCollection Date: 2022-01-01 DOI: 10.1155/2022/5995775
Nathalie Wurtz, Issam Hasni, Audrey Bancod, Bernard La Scola

Ionised active water S-100® has been proposed as an original solution for use in dermocosmetics and for the treatment of wounds such as burns and atopic dermatitis. Among the mechanisms of action that are not completely understood, an antimicrobial activity would appear to be important. In the context of the COVID-19 pandemic, we assessed the inactivating efficacy of this solution on SARS-CoV-2 based on the recommendations of the NF-EN-14476+A2 standard. The tests carried out demonstrated that ionised active water S-100® 40% has a virucidal activity on SARS-CoV-2 which is at least 3.1 log after a contact time of 30 seconds and 3.5 log after two minutes at 20°C under clean conditions. Assays were also performed at 4°C and 37°C, and the results obtained are identical to those obtained at 20°C. This demonstration of the virucidal effect of ionised water against SARS-CoV-2 paves the way for the development of usage as an alternative disinfectant in SARS-CoV-2 control.

离子化活性水S-100®已被提议作为一种原始的解决方案,用于皮肤化妆品和治疗伤口,如烧伤和特应性皮炎。在尚未完全了解的作用机制中,抗菌活性似乎很重要。在COVID-19大流行背景下,我们根据NF-EN-14476+A2标准的建议,评估了该溶液对SARS-CoV-2的灭活效果。所进行的测试表明,电离活性水S-100®40%对SARS-CoV-2具有抗病毒活性,在30秒接触时间后至少为3.1 log,在清洁条件下在20°C下2分钟后至少为3.5 log。在4°C和37°C下也进行了检测,得到的结果与在20°C下得到的结果相同。离子水对SARS-CoV-2的杀病毒效果的证明,为开发作为一种替代消毒剂用于控制SARS-CoV-2铺平了道路。
{"title":"Confirmatory Virucidal Activity of Ionised Active Water S-100® on the SARS-CoV-2 Virus.","authors":"Nathalie Wurtz,&nbsp;Issam Hasni,&nbsp;Audrey Bancod,&nbsp;Bernard La Scola","doi":"10.1155/2022/5995775","DOIUrl":"https://doi.org/10.1155/2022/5995775","url":null,"abstract":"<p><p>Ionised active water S-100® has been proposed as an original solution for use in dermocosmetics and for the treatment of wounds such as burns and atopic dermatitis. Among the mechanisms of action that are not completely understood, an antimicrobial activity would appear to be important. In the context of the COVID-19 pandemic, we assessed the inactivating efficacy of this solution on SARS-CoV-2 based on the recommendations of the NF-EN-14476+A2 standard. The tests carried out demonstrated that ionised active water S-100® 40% has a virucidal activity on SARS-CoV-2 which is at least 3.1 log after a contact time of 30 seconds and 3.5 log after two minutes at 20°C under clean conditions. Assays were also performed at 4°C and 37°C, and the results obtained are identical to those obtained at 20°C. This demonstration of the virucidal effect of ionised water against SARS-CoV-2 paves the way for the development of usage as an alternative disinfectant in SARS-CoV-2 control.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":" ","pages":"5995775"},"PeriodicalIF":2.2,"publicationDate":"2022-06-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9232342/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40402094","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
The Anti-Cytokine Storm Activity of Quercetin Zinc and Vitamin C Complex. 槲皮素锌和维生素C复合物的抗细胞因子风暴活性。
IF 2.2 Q4 VIROLOGY Pub Date : 2022-06-08 eCollection Date: 2022-01-01 DOI: 10.1155/2022/1575605
Hayder B Sahib, Omer Abid Kathum, Rafal Shakeeb Alanee, Rehab A M Jawad, Ahmed Majeed Al-Shammari

Cytokine storm is one of the causative deaths in a patient with severe acute respiratory syndrome. This study aimed at evaluating the prophylaxis effect of quercetin complexes with zinc and buffered ascorbic acid upon cytokine storm induction in mice and identifying the complex's acute toxicity. Mice were randomly divided into three groups: group A, control group, received 0.9% normal saline; group B received 100 mg/kg of the complex one hour before lipopolysaccharide (LPS) administration; and group C received the LPS IP 5 mg/kg. Then, levels of interleukin 1 and interleukin 6 were measured in the serum, and lung and kidney tissues were investigated for any changes that may have happened. Thirty mice were used to investigate the acute toxicity; mice were distributed into six groups: one control group and five treated groups; then several serial dilutions from the complex have been prepared for different concentrations from 5 g/kg to 0.312 g/kg. The animals were observed for 14 days. The LD50 was deduced by the straight-line equation calculated from the dose-response curve. The results in this study showed that group A had no significant tissue change. LPS group C showed tissue damage in the lung and kidney, which significantly prevented by the pretreated complex in group B. Moreover, the complex's acute toxicity value (LD50) was 655 mg/kg. In conclusion, the complex has significantly ameliorated LPS-induced acute lung and kidney injury, largely through suppression of inflammation; the large lethal dose value may make the complex have a promising therapeutic effect in the prevention of cytokine storm.

细胞因子风暴是导致严重急性呼吸综合征患者死亡的原因之一。本研究旨在评价槲皮素与锌和缓冲抗坏血酸配合物对小鼠细胞因子风暴诱导的预防作用,并确定该配合物的急性毒性。将小鼠随机分为三组:A组为对照组,给予0.9%生理盐水;B组在脂多糖(LPS)给药前1小时给予该复合物100 mg/kg;C组给予LPS IP 5 mg/kg。然后,测量血清中白细胞介素1和白细胞介素6的水平,并检查肺和肾组织是否有任何可能发生的变化。用30只小鼠进行急性毒性试验;将小鼠分为6组:1个对照组和5个治疗组;然后从络合物中制备了不同浓度的连续稀释物,从5 g/kg到0.312 g/kg。观察14 d。根据剂量-响应曲线计算直线方程,推导出LD50。本研究结果显示,A组无明显组织改变。LPS C组大鼠肺、肾组织损伤明显,b组预处理后的配合物明显阻止了这种损伤,其急性毒性值(LD50)为655 mg/kg。综上所述,该复合物显著改善了lps诱导的急性肺和肾损伤,主要是通过抑制炎症;大的致死剂量值可能使该复合物在预防细胞因子风暴方面具有很好的治疗效果。
{"title":"The Anti-Cytokine Storm Activity of Quercetin Zinc and Vitamin C Complex.","authors":"Hayder B Sahib,&nbsp;Omer Abid Kathum,&nbsp;Rafal Shakeeb Alanee,&nbsp;Rehab A M Jawad,&nbsp;Ahmed Majeed Al-Shammari","doi":"10.1155/2022/1575605","DOIUrl":"https://doi.org/10.1155/2022/1575605","url":null,"abstract":"<p><p>Cytokine storm is one of the causative deaths in a patient with severe acute respiratory syndrome. This study aimed at evaluating the prophylaxis effect of quercetin complexes with zinc and buffered ascorbic acid upon cytokine storm induction in mice and identifying the complex's acute toxicity. Mice were randomly divided into three groups: group A, control group, received 0.9% normal saline; group B received 100 mg/kg of the complex one hour before lipopolysaccharide (LPS) administration; and group C received the LPS IP 5 mg/kg. Then, levels of interleukin 1 and interleukin 6 were measured in the serum, and lung and kidney tissues were investigated for any changes that may have happened. Thirty mice were used to investigate the acute toxicity; mice were distributed into six groups: one control group and five treated groups; then several serial dilutions from the complex have been prepared for different concentrations from 5 g/kg to 0.312 g/kg. The animals were observed for 14 days. The LD<sub>50</sub> was deduced by the straight-line equation calculated from the dose-response curve. The results in this study showed that group A had no significant tissue change. LPS group C showed tissue damage in the lung and kidney, which significantly prevented by the pretreated complex in group B. Moreover, the complex's acute toxicity value (LD<sub>50</sub>) was 655 mg/kg. In conclusion, the complex has significantly ameliorated LPS-induced acute lung and kidney injury, largely through suppression of inflammation; the large lethal dose value may make the complex have a promising therapeutic effect in the prevention of cytokine storm.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":" ","pages":"1575605"},"PeriodicalIF":2.2,"publicationDate":"2022-06-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9200564/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40041571","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Partial Analysis of the Capsid Protein (VP1) of Human Sapovirus Isolated from Children with Diarrhoea in Rural Communities of South Africa 南非农村腹泻儿童中分离的人类Sapovirus衣壳蛋白(VP1)的部分分析
IF 2.2 Q4 VIROLOGY Pub Date : 2022-06-02 DOI: 10.1155/2022/9928378
Mpho Magwalivha, J. K. Ngandu, A. Traoré, N. Potgieter
Background Viral diarrhoea is a concern in acute gastroenteritis cases among children younger than 5 years of age. Sapovirus has been noted as an emerging causative agent of acute gastroenteritis worldwide. Objective/Study Design. The aim of this study was to characterize human sapoviruses targeting the VP1 (NVR and N-terminal) region. Twenty-five samples were randomly selected from 40 sapovirus-positive samples previously detected and analyzed for the VP1 region using the One-Step RT-PCR assay. The PCR products were subjected to Sanger sequencing analysis. Results The polyprotein segment (NVR and N-terminal) was successfully amplified from 10/25 samples. Sapovirus GI.1 was the most predominant strain (6/10; 60%), followed by SV-GII.1 (2/10; 20%) and 10% of each GI.3 and GII.3. Conclusion Through the partial analysis of the VP1 region, this study provides more data to add on the human sapovirus genetic characterization of circulating strains in South Africa, with the proposition of further analysis of sapovirus VP1 fragments for the viral structure and function.
背景病毒性腹泻是5岁以下儿童急性肠胃炎病例中的一个令人担忧的问题。皂化病毒已被认为是世界范围内急性肠胃炎的一种新病原体。目标/研究设计。本研究的目的是表征靶向VP1(NVR和N-末端)区域的人类腐病毒。从先前检测到的40个腐病毒阳性样本中随机选择25个样本,并使用一步RT-PCR测定法分析VP1区域。对PCR产物进行Sanger测序分析。结果成功地从10/25份样品中扩增出多蛋白片段(NVR和N末端)。皂苷病毒GI.1是最主要的菌株(6/10;60%),其次是SV-GII.1(2/10;20%),GI.3和GII.3各占10%。结论通过对VP1区域的部分分析,本研究为南非流行株的人类sapovirus基因鉴定提供了更多的数据,并提出了进一步分析sapovirusVP1片段的病毒结构和功能的建议。
{"title":"Partial Analysis of the Capsid Protein (VP1) of Human Sapovirus Isolated from Children with Diarrhoea in Rural Communities of South Africa","authors":"Mpho Magwalivha, J. K. Ngandu, A. Traoré, N. Potgieter","doi":"10.1155/2022/9928378","DOIUrl":"https://doi.org/10.1155/2022/9928378","url":null,"abstract":"Background Viral diarrhoea is a concern in acute gastroenteritis cases among children younger than 5 years of age. Sapovirus has been noted as an emerging causative agent of acute gastroenteritis worldwide. Objective/Study Design. The aim of this study was to characterize human sapoviruses targeting the VP1 (NVR and N-terminal) region. Twenty-five samples were randomly selected from 40 sapovirus-positive samples previously detected and analyzed for the VP1 region using the One-Step RT-PCR assay. The PCR products were subjected to Sanger sequencing analysis. Results The polyprotein segment (NVR and N-terminal) was successfully amplified from 10/25 samples. Sapovirus GI.1 was the most predominant strain (6/10; 60%), followed by SV-GII.1 (2/10; 20%) and 10% of each GI.3 and GII.3. Conclusion Through the partial analysis of the VP1 region, this study provides more data to add on the human sapovirus genetic characterization of circulating strains in South Africa, with the proposition of further analysis of sapovirus VP1 fragments for the viral structure and function.","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2022-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47688527","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Impact of Thermal Pretreatment of Saliva on the RT-PCR Detection of SARS-CoV-2 唾液热预处理对SARS-CoV-2 RT-PCR检测的影响
IF 2.2 Q4 VIROLOGY Pub Date : 2022-06-01 DOI: 10.1155/2022/7442907
O. Morais, Manuel Rui Azevedo Alves, Paulo Fernandes
The use of saliva directly as a specimen to detect viral RNA by RT-PCR has been tested for a long time as its advantages are relevant in terms of convenience and costs. However, as other body fluids, its proven inhibition effect on the amplification reaction can be troublesome and compromise its use in the detection of viral particles. The aim of the present work is to demonstrate that saliva pretreatment may influence the RT-PCR amplification of three gene targets of SARS-CoV-2 significantly. A pool of RNA from confirmed COVID-19 patients was used to test the influence of heat pretreatment of saliva samples at 95°C for 5, 10, 15 and 20 min on the amplification performance of ORF1ab, E, and N SARS-CoV-2 genes. Prolonged heating at 95°C significantly improves the Ct value shift, usually observed in the presence of saliva, increasing the limit of detection of viral genes ORF1ab, E, and N. When tested using a cohort of COVID-19 patients' saliva, the increased time of heat pretreatment resulted in a significant increase in the detection sensitivity.
使用唾液直接作为样本通过RT-PCR检测病毒RNA已经测试了很长时间,因为它的优点与便利性和成本有关。然而,与其他体液一样,其对扩增反应的抑制作用可能很麻烦,并影响其在病毒颗粒检测中的应用。本工作的目的是证明唾液预处理可能显著影响严重急性呼吸系统综合征冠状病毒2型三个基因靶点的RT-PCR扩增。来自新冠肺炎确诊患者的RNA库用于测试唾液样本在95°C下热预处理5、10、15和20天的影响 min对ORF1ab、E和N严重急性呼吸系统综合征冠状病毒2型基因扩增性能的影响。在95°C下长时间加热显著改善了Ct值的变化,通常在有唾液的情况下观察到,增加了病毒基因ORF1ab、E和N的检测极限。当使用新冠肺炎患者的唾液队列进行测试时,加热预处理时间的增加导致检测灵敏度的显著提高。
{"title":"Impact of Thermal Pretreatment of Saliva on the RT-PCR Detection of SARS-CoV-2","authors":"O. Morais, Manuel Rui Azevedo Alves, Paulo Fernandes","doi":"10.1155/2022/7442907","DOIUrl":"https://doi.org/10.1155/2022/7442907","url":null,"abstract":"The use of saliva directly as a specimen to detect viral RNA by RT-PCR has been tested for a long time as its advantages are relevant in terms of convenience and costs. However, as other body fluids, its proven inhibition effect on the amplification reaction can be troublesome and compromise its use in the detection of viral particles. The aim of the present work is to demonstrate that saliva pretreatment may influence the RT-PCR amplification of three gene targets of SARS-CoV-2 significantly. A pool of RNA from confirmed COVID-19 patients was used to test the influence of heat pretreatment of saliva samples at 95°C for 5, 10, 15 and 20 min on the amplification performance of ORF1ab, E, and N SARS-CoV-2 genes. Prolonged heating at 95°C significantly improves the Ct value shift, usually observed in the presence of saliva, increasing the limit of detection of viral genes ORF1ab, E, and N. When tested using a cohort of COVID-19 patients' saliva, the increased time of heat pretreatment resulted in a significant increase in the detection sensitivity.","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44553794","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Comparative Performance Evaluation of FilmArray BioFire RP2.1 and MAScIR 2.0 Assays for SARS-CoV-2 Detection FilmArray BioFire RP2.1与MAScIR 2.0检测SARS-CoV-2的性能比较
IF 2.2 Q4 VIROLOGY Pub Date : 2022-06-01 DOI: 10.1155/2022/4510900
S. Tazi, H. Kabbaj, Jalila Zirar, Amal Zouaki, Ghizlane El Amin, Othman El Himeur, M. Seffar
Background RT-PCR is the gold standard for COVID-19 diagnosis, but the lack of standardization of assays, whose diagnostic performance may widely vary, complicates the interpretation of the discrepancies that may be encountered. Study design. We conducted a retrospective study over a ten-month period at the Central Laboratory of Virology of Ibn Sina University Hospital of Rabat. We included nasopharyngeal swabs, positive and negative for SARS-CoV-2 on FilmArray BioFire® Respiratory Panel 2.1 Plus, which were subjected to our laboratory's reference test, MAScIR SARS-CoV-2 M kit 2.0, initially or after a freeze-thaw cycle. The results were compared, and each discrepant sample with sufficient volume underwent the third test, using ARGENE® SARS-CoV-2 R-GENE kit. Results Of 80 SARS-CoV-2 negative samples on FilmArray, there were no discordant results, whereas of 80 SARS-CoV-2 positive samples on FilmArray, 21 had discordant results on MAScIR, and only 11 could be tested on ARGENE, revealing positive results in 6 cases. 12.7% and 76.5% correspond to the discordance rates for MAScIR (with one or both targets detected on FilmArray), while 14.3% and 100% correspond to those of ARGENE. As the estimated sensitivity and specificity of FilmArray, compared with MAScIR, were 100% and 79.2%, respectively, its lower limit of detection, and ARGENE assay results, made it difficult to distinguish between false positives on FilmArray and false negatives on MAScIR without further investigations. Conclusion The implementation of a new assay in our laboratory revealed discrepancies suggesting a lack of sensitivity of our laboratory's reference test, leading us consequently to retain the SARS-CoV-2 positive result of these discordant samples on FilmArray, regardless of the detection of one or both targets. Our study, which is, to our knowledge, the first comparing FilmArray RP2.1 and MAScIR 2.0 assays for SARS-CoV-2 detection, highlights the urgent need to standardize RT-PCR assays for COVID-19 diagnosis.
背景RT-PCR是新冠肺炎诊断的金标准,但缺乏检测的标准化,其诊断性能可能有很大差异,这使对可能遇到的差异的解释变得复杂。研究设计。我们在拉巴特伊本西纳大学医院的中央病毒学实验室进行了为期十个月的回顾性研究。我们在FilmArray BioFire®Respiratory Panel 2.1 Plus上纳入了严重急性呼吸系统综合征冠状病毒2阳性和阴性的鼻咽拭子,这些拭子在最初或冻融循环后接受了我们实验室的参考测试MAScIR严重急性呼吸系统冠状病毒2 M试剂盒2.0。对结果进行比较,并使用ARGENE®严重急性呼吸系统综合征冠状病毒2型R-GENE试剂盒对每个体积足够的差异样本进行第三次检测。结果在FilmArray上的80个严重急性呼吸系统综合征冠状病毒2型阴性样本中,没有不一致的结果,而在FilmAarray上的80份严重急性呼吸系冠状病毒2型阳性样本中,有21份在MAScIR上有不一致的结果,只有11份可以在ARGENE上检测,6例阳性。12.7%和76.5%对应于MAScIR(在FilmArray上检测到一个或两个目标)的不一致率,而14.3%和100%对应于ARGENE的不一致性。由于与MAScIR相比,FilmArray的估计灵敏度和特异性分别为100%和79.2%,其检测下限和ARGENE测定结果使得在没有进一步研究的情况下很难区分FilmArrays上的假阳性和MAScIR上的假阴性。结论在我们实验室实施的一种新的检测方法显示了差异,这表明我们实验室的参考检测缺乏敏感性,因此我们在FilmArray上保留了这些不一致样本的严重急性呼吸系统综合征冠状病毒2型阳性结果,无论检测到一个或两个靶点。据我们所知,我们的研究首次将FilmArray RP2.1和MAScIR 2.0检测方法用于SARS-CoV-2检测,这突出表明迫切需要标准化RT-PCR检测方法用于新冠肺炎诊断。
{"title":"Comparative Performance Evaluation of FilmArray BioFire RP2.1 and MAScIR 2.0 Assays for SARS-CoV-2 Detection","authors":"S. Tazi, H. Kabbaj, Jalila Zirar, Amal Zouaki, Ghizlane El Amin, Othman El Himeur, M. Seffar","doi":"10.1155/2022/4510900","DOIUrl":"https://doi.org/10.1155/2022/4510900","url":null,"abstract":"Background RT-PCR is the gold standard for COVID-19 diagnosis, but the lack of standardization of assays, whose diagnostic performance may widely vary, complicates the interpretation of the discrepancies that may be encountered. Study design. We conducted a retrospective study over a ten-month period at the Central Laboratory of Virology of Ibn Sina University Hospital of Rabat. We included nasopharyngeal swabs, positive and negative for SARS-CoV-2 on FilmArray BioFire® Respiratory Panel 2.1 Plus, which were subjected to our laboratory's reference test, MAScIR SARS-CoV-2 M kit 2.0, initially or after a freeze-thaw cycle. The results were compared, and each discrepant sample with sufficient volume underwent the third test, using ARGENE® SARS-CoV-2 R-GENE kit. Results Of 80 SARS-CoV-2 negative samples on FilmArray, there were no discordant results, whereas of 80 SARS-CoV-2 positive samples on FilmArray, 21 had discordant results on MAScIR, and only 11 could be tested on ARGENE, revealing positive results in 6 cases. 12.7% and 76.5% correspond to the discordance rates for MAScIR (with one or both targets detected on FilmArray), while 14.3% and 100% correspond to those of ARGENE. As the estimated sensitivity and specificity of FilmArray, compared with MAScIR, were 100% and 79.2%, respectively, its lower limit of detection, and ARGENE assay results, made it difficult to distinguish between false positives on FilmArray and false negatives on MAScIR without further investigations. Conclusion The implementation of a new assay in our laboratory revealed discrepancies suggesting a lack of sensitivity of our laboratory's reference test, leading us consequently to retain the SARS-CoV-2 positive result of these discordant samples on FilmArray, regardless of the detection of one or both targets. Our study, which is, to our knowledge, the first comparing FilmArray RP2.1 and MAScIR 2.0 assays for SARS-CoV-2 detection, highlights the urgent need to standardize RT-PCR assays for COVID-19 diagnosis.","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46257292","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Isolation and Molecular Characterization of Peste des Petits Ruminants Virus from Outbreaks in Southern Ethiopia, 2020 2020年埃塞俄比亚南部爆发的小反刍动物害虫病毒的分离和分子特征
IF 2.2 Q4 VIROLOGY Pub Date : 2022-05-29 DOI: 10.1155/2022/5329898
Abdeally Mohammed, T. R. Chibssa, Waktole Terfa, F. Aklilu, Delesa Damena, Redeat Belayneh, Menbere Kidane
Peste des petits ruminants (PPR) is one of the most important transboundary diseases of small ruminants. In this study, nasal and oral swabs (n = 24) were collected from sheep (n = 7) and goats (n = 17) with clinical signs in southern Ethiopia in March 2020. PPR virus was isolated on Vero dog cells expressing the signaling lymphocyte activation molecule (VDS) and screened using RT-qPCR. Positive samples were confirmed by conventional RT-PCR followed by sequencing of a partial nucleoprotein (N) gene segment. Results revealed that 54% (n = 13/24) of the tested samples were PPRV-positive Phylogenetic analysis revealed that the viruses belonged to lineage IV and lineage II. The lineage IV viruses were similar, although not identical, to other lineage IV viruses previously reported in Ethiopia and other East African countries while the lineage II viruses have been reported for the first time in Ethiopia showed a high nucleotide identity (99.06%) with the vaccine (Nigeria 75/1) that is currently used in Ethiopia for the prevention of PPR. Further investigations are therefore recommended in order to fully understand the true nature of the lineage II PPRVs in Ethiopia.
小反刍动物害虫(PPR)是小反刍动物最重要的跨界疾病之一。在这项研究中,鼻拭子和口腔拭子(n = 24)是从绵羊(n = 7) 和山羊(n = 17) 2020年3月在埃塞俄比亚南部出现临床症状。在表达信号淋巴细胞活化分子(VDS)的Vero狗细胞上分离PPR病毒,并使用RT-qPCR进行筛选。阳性样本通过常规RT-PCR确认,然后对部分核蛋白(N)基因片段进行测序。结果显示,54%(n = 13/24)为PPRV阳性。系统发育分析显示病毒属于谱系IV和谱系II。IV谱系病毒与埃塞俄比亚和其他东非国家先前报道的其他IV谱系病毒相似,尽管不完全相同,而埃塞俄比亚首次报道的II谱系病毒与目前埃塞俄比亚用于预防PPR的疫苗(尼日利亚75/1)显示出高核苷酸同一性(99.06%)。因此,建议进行进一步调查,以充分了解埃塞俄比亚第二谱系PPRV的真实性质。
{"title":"Isolation and Molecular Characterization of Peste des Petits Ruminants Virus from Outbreaks in Southern Ethiopia, 2020","authors":"Abdeally Mohammed, T. R. Chibssa, Waktole Terfa, F. Aklilu, Delesa Damena, Redeat Belayneh, Menbere Kidane","doi":"10.1155/2022/5329898","DOIUrl":"https://doi.org/10.1155/2022/5329898","url":null,"abstract":"Peste des petits ruminants (PPR) is one of the most important transboundary diseases of small ruminants. In this study, nasal and oral swabs (n = 24) were collected from sheep (n = 7) and goats (n = 17) with clinical signs in southern Ethiopia in March 2020. PPR virus was isolated on Vero dog cells expressing the signaling lymphocyte activation molecule (VDS) and screened using RT-qPCR. Positive samples were confirmed by conventional RT-PCR followed by sequencing of a partial nucleoprotein (N) gene segment. Results revealed that 54% (n = 13/24) of the tested samples were PPRV-positive Phylogenetic analysis revealed that the viruses belonged to lineage IV and lineage II. The lineage IV viruses were similar, although not identical, to other lineage IV viruses previously reported in Ethiopia and other East African countries while the lineage II viruses have been reported for the first time in Ethiopia showed a high nucleotide identity (99.06%) with the vaccine (Nigeria 75/1) that is currently used in Ethiopia for the prevention of PPR. Further investigations are therefore recommended in order to fully understand the true nature of the lineage II PPRVs in Ethiopia.","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2022-05-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49464019","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Association of Septic Shock with Mortality in Hospitalized COVID-19 Patients in Wuhan, China 武汉COVID-19住院患者感染性休克与死亡率的关系
IF 2.2 Q4 VIROLOGY Pub Date : 2022-04-23 DOI: 10.1155/2022/3178283
Shaoqiu Chen, Zitong Gao, Ling Hu, Y. Zuo, Yuanyuan Fu, Meilin Wei, Emory Zitello, G. Huang, Youping Deng
Purpose Septic shock is a severe complication of COVID-19 patients. We aim to identify risk factors associated with septic shock and mortality among COVID-19 patients. Methods A total of 212 COVID-19 confirmed patients in Wuhan were included in this retrospective study. Clinical outcomes were designated as nonseptic shock and septic shock. Log-rank test was conducted to determine any association with clinical progression. A prediction model was established using random forest. Results The mortality of septic shock and nonshock patients with COVID-19 was 96.7% (29/30) and 3.8% (7/182). Patients taking hypnotics had a much lower chance to develop septic shock (HR = 0.096, p=0.0014). By univariate logistic regression analysis, 40 risk factors were significantly associated with septic shock. Based on multiple regression analysis, eight risk factors were shown to be independent risk factors and these factors were then selected to build a model to predict septic shock with AUC = 0.956. These eight factors included disease severity (HR = 15, p < 0.001), age > 65 years (HR = 2.6, p=0.012), temperature > 39.1°C (HR = 2.9, p=0.047), white blood cell count > 10 × 10⁹ (HR = 6.9, p < 0.001), neutrophil count > 75 × 10⁹ (HR = 2.4, p=0.022), creatine kinase > 5 U/L (HR = 1.8, p=0.042), glucose > 6.1 mmol/L (HR = 7, p < 0.001), and lactate > 2 mmol/L (HR = 22, p < 0.001). Conclusions We found 40 risk factors were significantly associated with septic shock. The model contained eight independent factors that can accurately predict septic shock. The administration of hypnotics could potentially reduce the incidence of septic shock in COVID-19 patients.
目的感染性休克是新冠肺炎患者的严重并发症。我们的目的是确定与COVID-19患者感染性休克和死亡率相关的危险因素。方法对武汉市212例新冠肺炎确诊患者进行回顾性研究。临床结果分为非感染性休克和感染性休克。进行Log-rank检验以确定是否与临床进展相关。利用随机森林建立预测模型。结果感染性休克和非休克患者病死率分别为96.7%(29/30)和3.8%(7/182)。服用催眠药的患者发生感染性休克的几率较低(HR = 0.096, p=0.0014)。经单因素logistic回归分析,有40个危险因素与脓毒性休克显著相关。经多元回归分析,8个危险因素为独立危险因素,选取这些危险因素建立预测脓毒性休克的模型,AUC = 0.956。这八个因素包括疾病严重程度(HR = 15, p < 0.001),年龄> 65岁(HR = 2.6, p = 0.012),温度> 39.1°C (HR = 2.9, p = 0.047),白细胞计数> 10×10⁹(HR = 6.9, p < 0.001),中性粒细胞计数> 75×10⁹(HR = 2.4, p = 0.022),肌酸激酶> 5 U / L (HR = 1.8, p = 0.042),葡萄糖> 6.1更易/ L (HR = 7, p < 0.001),和乳酸> 2更易与L (HR = 22, p < 0.001)。结论发现有40种危险因素与脓毒性休克显著相关。该模型包含8个独立因素,可准确预测感染性休克。催眠药的使用可能会降低COVID-19患者感染性休克的发生率。
{"title":"Association of Septic Shock with Mortality in Hospitalized COVID-19 Patients in Wuhan, China","authors":"Shaoqiu Chen, Zitong Gao, Ling Hu, Y. Zuo, Yuanyuan Fu, Meilin Wei, Emory Zitello, G. Huang, Youping Deng","doi":"10.1155/2022/3178283","DOIUrl":"https://doi.org/10.1155/2022/3178283","url":null,"abstract":"Purpose Septic shock is a severe complication of COVID-19 patients. We aim to identify risk factors associated with septic shock and mortality among COVID-19 patients. Methods A total of 212 COVID-19 confirmed patients in Wuhan were included in this retrospective study. Clinical outcomes were designated as nonseptic shock and septic shock. Log-rank test was conducted to determine any association with clinical progression. A prediction model was established using random forest. Results The mortality of septic shock and nonshock patients with COVID-19 was 96.7% (29/30) and 3.8% (7/182). Patients taking hypnotics had a much lower chance to develop septic shock (HR = 0.096, p=0.0014). By univariate logistic regression analysis, 40 risk factors were significantly associated with septic shock. Based on multiple regression analysis, eight risk factors were shown to be independent risk factors and these factors were then selected to build a model to predict septic shock with AUC = 0.956. These eight factors included disease severity (HR = 15, p < 0.001), age > 65 years (HR = 2.6, p=0.012), temperature > 39.1°C (HR = 2.9, p=0.047), white blood cell count > 10 × 10⁹ (HR = 6.9, p < 0.001), neutrophil count > 75 × 10⁹ (HR = 2.4, p=0.022), creatine kinase > 5 U/L (HR = 1.8, p=0.042), glucose > 6.1 mmol/L (HR = 7, p < 0.001), and lactate > 2 mmol/L (HR = 22, p < 0.001). Conclusions We found 40 risk factors were significantly associated with septic shock. The model contained eight independent factors that can accurately predict septic shock. The administration of hypnotics could potentially reduce the incidence of septic shock in COVID-19 patients.","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2022-04-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42832709","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Role of Apoptosis in HIV Pathogenesis 细胞凋亡在HIV发病中的作用
IF 2.2 Q4 VIROLOGY Pub Date : 2022-04-14 DOI: 10.1155/2022/8148119
Cyril Jabea Ekabe, Njinju Asaba Clinton, Eugene Kusi Agyei, Jules Kehbila
The apoptotic pathway is an important cell death pathway that contributes to the maintenance of homeostasis in living systems. However, variations in apoptosis have been linked to many diseases such as cancers and chronic infections. The HIV infection has contributed to increase mortality and morbidity worldwide, predominantly through the induction of gradual depletion of CD4+ T cells. The induction and mediation of both the intrinsic and extrinsic apoptotic pathways are crucial in HIV pathogenesis and intracellular survival. Consequently, a deep molecular understanding of how apoptosis is induced and modulated in HIV-mediated CD4+ T cell depletion is paramount, as this can lead to new portals of therapeutic intervention and control.
凋亡途径是维持生命系统内稳态的重要细胞死亡途径。然而,细胞凋亡的变化与许多疾病,如癌症和慢性感染有关。艾滋病毒感染主要通过诱导CD4+ T细胞逐渐耗竭而导致世界范围内死亡率和发病率增加。内源性和外源性凋亡途径的诱导和介导在HIV发病和细胞内存活中至关重要。因此,深入了解细胞凋亡如何在hiv介导的CD4+ T细胞耗竭中被诱导和调节是至关重要的,因为这可以为治疗干预和控制提供新的途径。
{"title":"Role of Apoptosis in HIV Pathogenesis","authors":"Cyril Jabea Ekabe, Njinju Asaba Clinton, Eugene Kusi Agyei, Jules Kehbila","doi":"10.1155/2022/8148119","DOIUrl":"https://doi.org/10.1155/2022/8148119","url":null,"abstract":"The apoptotic pathway is an important cell death pathway that contributes to the maintenance of homeostasis in living systems. However, variations in apoptosis have been linked to many diseases such as cancers and chronic infections. The HIV infection has contributed to increase mortality and morbidity worldwide, predominantly through the induction of gradual depletion of CD4+ T cells. The induction and mediation of both the intrinsic and extrinsic apoptotic pathways are crucial in HIV pathogenesis and intracellular survival. Consequently, a deep molecular understanding of how apoptosis is induced and modulated in HIV-mediated CD4+ T cell depletion is paramount, as this can lead to new portals of therapeutic intervention and control.","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":"2022 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2022-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"64786704","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Respiratory Syncytial Virus Infection Modeled in Aging Cotton Rats (Sigmodon hispidus) and Mice (Mus musculus). 衰老棉大鼠和小鼠呼吸道合胞病毒感染模型的建立。
IF 2.2 Q4 VIROLOGY Pub Date : 2022-03-09 eCollection Date: 2022-01-01 DOI: 10.1155/2022/8637545
Olivia E Harder, Stefan Niewiesk

Serious infection with respiratory syncytial virus (RSV) is associated with high risk in infants, children, and elderly. There is currently no approved vaccine against RSV infection, and the only available prevention is immunoprophylaxis utilized in high-risk infants, leaving the elderly without many options. In the elderly, the chronic low-grade inflammatory state of the body can play a significant role during infection. The cotton rat and mouse have emerged as the preferred small animal models to study RSV infection in the elderly. These animal models of aging have shown an age-dependent time course for clearance of virus correlating with a significantly diminished cytotoxic T lymphocyte and humoral immune response in old animals compared to adult animals. In addition, protection through vaccination is reduced in aging rodents. These results mirror the findings in humans. In mice and cotton rats, treatment with ibuprofen, a nonselective nonsteroidal anti-inflammatory drug (NSAID), to decrease the chronic low-grade inflammation of the elderly immune system has proven successful in restoring the function of cytotoxic lymphocytes. While more research is required, these treatment types promise a beneficial effect in addition to a putative vaccine. Choosing an appropriate animal model to study RSV infection in the aging immune system is essential to benefit the growing population of elderly in the world. This review focuses on the current research of RSV infection in the cotton rat and mouse as model systems for an aging immune system.

呼吸道合胞病毒(RSV)严重感染与婴幼儿、儿童和老年人的高风险相关。目前还没有批准的针对呼吸道合胞病毒感染的疫苗,唯一可用的预防方法是对高危婴儿使用免疫预防,这使得老年人没有很多选择。在老年人中,身体的慢性低度炎症状态可在感染期间发挥重要作用。棉花大鼠和小鼠已成为研究老年人RSV感染的首选小动物模型。这些衰老动物模型显示,与成年动物相比,老年动物清除病毒的时间过程与细胞毒性T淋巴细胞和体液免疫反应的显著减弱有关。此外,通过接种疫苗的保护作用在衰老的啮齿动物中减弱。这些结果反映了在人类身上的发现。在小鼠和棉大鼠中,用非选择性非甾体抗炎药(NSAID)布洛芬治疗老年免疫系统慢性低度炎症已被证明成功地恢复了细胞毒性淋巴细胞的功能。虽然还需要更多的研究,但这些治疗方法除了可能的疫苗外,还有望产生有益的效果。选择合适的动物模型来研究RSV感染在衰老免疫系统中的作用,对于造福世界上不断增长的老年人口至关重要。本文就RSV感染棉花大鼠和小鼠作为免疫系统老化模型系统的研究现状进行综述。
{"title":"Respiratory Syncytial Virus Infection Modeled in Aging Cotton Rats (<i>Sigmodon hispidus</i>) and Mice (<i>Mus musculus</i>).","authors":"Olivia E Harder,&nbsp;Stefan Niewiesk","doi":"10.1155/2022/8637545","DOIUrl":"https://doi.org/10.1155/2022/8637545","url":null,"abstract":"<p><p>Serious infection with respiratory syncytial virus (RSV) is associated with high risk in infants, children, and elderly. There is currently no approved vaccine against RSV infection, and the only available prevention is immunoprophylaxis utilized in high-risk infants, leaving the elderly without many options. In the elderly, the chronic low-grade inflammatory state of the body can play a significant role during infection. The cotton rat and mouse have emerged as the preferred small animal models to study RSV infection in the elderly. These animal models of aging have shown an age-dependent time course for clearance of virus correlating with a significantly diminished cytotoxic T lymphocyte and humoral immune response in old animals compared to adult animals. In addition, protection through vaccination is reduced in aging rodents. These results mirror the findings in humans. In mice and cotton rats, treatment with ibuprofen, a nonselective nonsteroidal anti-inflammatory drug (NSAID), to decrease the chronic low-grade inflammation of the elderly immune system has proven successful in restoring the function of cytotoxic lymphocytes. While more research is required, these treatment types promise a beneficial effect in addition to a putative vaccine. Choosing an appropriate animal model to study RSV infection in the aging immune system is essential to benefit the growing population of elderly in the world. This review focuses on the current research of RSV infection in the cotton rat and mouse as model systems for an aging immune system.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":" ","pages":"8637545"},"PeriodicalIF":2.2,"publicationDate":"2022-03-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8926466/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40307580","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
The Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2) Pandemic: Are Africa's Prevalence and Mortality Rates Relatively Low? 严重急性呼吸综合征冠状病毒-2 (SARS-CoV-2)大流行:非洲的患病率和死亡率相对较低吗?
IF 2.2 Q4 VIROLOGY Pub Date : 2022-02-26 eCollection Date: 2022-01-01 DOI: 10.1155/2022/3387784
Solomon H Mariam

Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), the cause of coronavirus disease 19 (COVID-19), has been rapidly spreading since December 2019, and within a few months, it turned out to be a global pandemic. The disease affects primarily the lungs, but its pathogenesis spreads to other organs as well. However, its mortality rates vary, and in the majority of infected people, there are no serious consequences. Many factors including advanced age, preexisting health conditions, and genetic predispositions are believed to exacerbate outcomes of COVID-19. The virus contains several structural proteins including the spike (S) protein with subunits for binding, fusion, and internalization into host cells following interaction with host cell receptors and proteases (ACE2 and TMPRSS2, respectively) to cause the subsequent pathology. Although the pandemic has spread into all countries, most of Africa is thought of as having relatively less prevalence and mortality. Several hypotheses have been forwarded as reasons for this and include warmer weather conditions, vaccination with BCG (i.e., trained immunity), and previous malaria infection. From genetics or metabolic points of view, it has been proposed that most African populations could be protected to some degree because they lack some genetic susceptibility risk factors or have low-level expression of allelic variants, such as ACE2 and TMPRSS2 that are thought to be involved in increased infection risk or disease severity. The frequency of occurrence of α-1 antitrypsin (an inhibitor of a tissue-degrading protease, thereby protecting target host tissues including the lung) deficiency is also reported to be low in most African populations. More recently, infections in Africa appear to be on the rise. In general, there are few studies on the epidemiology and pathogenesis of the disease in African contexts, and the overall costs and human life losses due to the pandemic in Africa will be determined by all factors and conditions interacting in complex ways.

严重急性呼吸综合征冠状病毒-2(SARS-CoV-2)是冠状病毒疾病19(新冠肺炎)的病因,自2019年12月以来一直在迅速传播,几个月内,它就成为了一场全球大流行。这种疾病主要影响肺部,但其发病机制也会传播到其他器官。然而,它的死亡率各不相同,对大多数感染者来说,没有严重后果。许多因素,包括高龄、先前存在的健康状况和遗传易感性,被认为会加剧新冠肺炎的后果。该病毒包含几种结构蛋白,包括刺突蛋白(S),其亚基用于在与宿主细胞受体和蛋白酶(分别为ACE2和TMPRSS2)相互作用后结合、融合和内化到宿主细胞中,从而引起随后的病理学。尽管疫情已经蔓延到所有国家,但人们认为非洲大部分地区的流行率和死亡率相对较低。有几个假设被认为是造成这种情况的原因,包括天气变暖、接种卡介苗(即经过训练的免疫力)和以前感染过疟疾。从遗传学或代谢学的角度来看,有人提出,大多数非洲人群可能会受到一定程度的保护,因为他们缺乏一些遗传易感性风险因素,或具有低水平的等位基因变体表达,如ACE2和TMPRSS2,这些变体被认为与感染风险或疾病严重程度的增加有关。据报道,在大多数非洲人群中,α-1抗胰蛋白酶(一种组织降解蛋白酶的抑制剂,从而保护包括肺在内的靶宿主组织)缺乏症的发生频率也很低。最近,非洲的感染率似乎在上升。总的来说,在非洲背景下,关于该疾病的流行病学和发病机制的研究很少,非洲疫情造成的总体成本和人类生命损失将由以复杂方式相互作用的所有因素和条件决定。
{"title":"The Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2) Pandemic: Are Africa's Prevalence and Mortality Rates Relatively Low?","authors":"Solomon H Mariam","doi":"10.1155/2022/3387784","DOIUrl":"10.1155/2022/3387784","url":null,"abstract":"<p><p>Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), the cause of coronavirus disease 19 (COVID-19), has been rapidly spreading since December 2019, and within a few months, it turned out to be a global pandemic. The disease affects primarily the lungs, but its pathogenesis spreads to other organs as well. However, its mortality rates vary, and in the majority of infected people, there are no serious consequences. Many factors including advanced age, preexisting health conditions, and genetic predispositions are believed to exacerbate outcomes of COVID-19. The virus contains several structural proteins including the spike (S) protein with subunits for binding, fusion, and internalization into host cells following interaction with host cell receptors and proteases (ACE2 and TMPRSS2, respectively) to cause the subsequent pathology. Although the pandemic has spread into all countries, most of Africa is thought of as having relatively less prevalence and mortality. Several hypotheses have been forwarded as reasons for this and include warmer weather conditions, vaccination with BCG (i.e., trained immunity), and previous malaria infection. From genetics or metabolic points of view, it has been proposed that most African populations could be protected to some degree because they lack some genetic susceptibility risk factors or have low-level expression of allelic variants, such as ACE2 and TMPRSS2 that are thought to be involved in increased infection risk or disease severity. The frequency of occurrence of <i>α</i>-1 antitrypsin (an inhibitor of a tissue-degrading protease, thereby protecting target host tissues including the lung) deficiency is also reported to be low in most African populations. More recently, infections in Africa appear to be on the rise. In general, there are few studies on the epidemiology and pathogenesis of the disease in African contexts, and the overall costs and human life losses due to the pandemic in Africa will be determined by all factors and conditions interacting in complex ways.</p>","PeriodicalId":7473,"journal":{"name":"Advances in Virology","volume":"2022 1","pages":"3387784"},"PeriodicalIF":2.2,"publicationDate":"2022-02-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8898136/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42485162","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
期刊
Advances in Virology
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1