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[BSL-4 facility and New virus research in Japan]. [BSL-4设施和日本的新病毒研究]。
Pub Date : 2022-01-01 DOI: 10.2222/jsv.72.1
Jiro Yasuda

Viral hemorrhagic fevers such as Ebola virus disease, Marburg disease, Lassa fever, and Crimean-Congo hemorrhagic fever are infectious diseases that can cause severe, life-threatening illness. At present, there are only few licensed vaccines and antiviral drugs for these viral hemorrhagic fevers. The viruses which cause these viral hemorrhagic fevers are classified as BSL-4 pathogens and can be handled only in BSL-4 containment laboratories. Therefore, to develop the vaccines and treatments for these diseases, BSL-4 facility is essential. However, the BSL-4 facility available for the basic or applied research using infectious BSL-4 pathogens has not been established in Japan so far. In July 2021, the construction of BSL-4 facility was completed at the campus of Nagasaki University. After the preparation for the full operation, the facility will be approved by the Minister of Health, Labour and Welfare as a BSL-4 facility. Here, I introduce the BSL-4 facility project of Nagasaki University and state the contributions of the BSL-4 facility to research and development.

埃博拉病毒病、马尔堡病、拉萨热和克里米亚-刚果出血热等病毒性出血热是可导致严重危及生命的疾病的传染病。目前,针对这些病毒性出血热的授权疫苗和抗病毒药物很少。导致这些病毒性出血热的病毒被归类为BSL-4病原体,只能在BSL-4控制实验室中处理。因此,为了开发针对这些疾病的疫苗和治疗方法,BSL-4设施是必不可少的。然而,迄今为止,日本尚未建立可用于使用传染性BSL-4病原体进行基础或应用研究的BSL-4设施。2021年7月,BSL-4设施在长崎大学校园竣工。在准备全面运营后,卫生、劳动和福利部长将批准该设施为BSL-4设施。在这里,我介绍长崎大学BSL-4设施项目,并陈述BSL-4设备对研发的贡献。
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引用次数: 0
[Digital transformation of COVID-19 research]. 【新冠肺炎研究的数字化转型】。
Pub Date : 2022-01-01 DOI: 10.2222/jsv.72.39
Hyeongki Park, Joo Hyeon Woo, Shoya Iwanami, Shingo Iwami

In a current life sciences research, we are in an era in which advanced technology emerging and utilize big data. Data-driven approaches such as machine learnings play an important role to analyze these datasets. However, limited clinical (time-course) datasets are available for infectious diseases, cancer, and other diseases. Especially in the case of emerging infectious disease outbreaks, clinical data obtained from a limited number of cases must be used to develop treatment strategies and public health policies. This means that many clinical data are not big data, which often makes the application of data-driven approaches difficult. In this paper, we mainly apply a mathematical model-based approach to the clinical data of COVID-19 and discuss how biologically important information can be extracted from the limited data and how they can benefit society.

在当前的生命科学研究中,我们正处于一个先进技术不断涌现并利用大数据的时代。机器学习等数据驱动方法在分析这些数据集方面发挥着重要作用。然而,有限的临床(时间进程)数据集可用于传染病、癌症和其他疾病。特别是在新出现的传染病暴发的情况下,必须使用从有限数量的病例中获得的临床数据来制定治疗策略和公共卫生政策。这意味着许多临床数据不是大数据,这往往使数据驱动方法的应用变得困难。在本文中,我们主要将基于数学模型的方法应用于新冠肺炎的临床数据,并讨论如何从有限的数据中提取具有生物学意义的信息,以及如何使社会受益。
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引用次数: 0
[South American Hemorrhagic Fever viruses and the cutting edge of the vaccine and antiviral development]. [南美出血热病毒与疫苗和抗病毒药物开发的前沿]。
Pub Date : 2022-01-01 DOI: 10.2222/jsv.72.7
Meion Lee, Takaaki Koma, Masaharu Iwasaki, Shuzo Urata

South American Hemorrhagic Fever is caused by the Arenavirus, which belong to the Family Arenaviridae, genus mammarenavirus, infection at South America. South American Hemorrhagic Fever includes 1. Argentinian Hemorrhagic fever caused by Junin virus, 2. Brazilian hemorrhagic fever caused by Sabia virus, 3. Venezuelan Hemorrhagic fever caused by Guanarito virus, 4. Bolivian Hemorrhagic fever caused by Machupo virus, and 5. Unassigned hemorrhagic fever caused by Chapare virus. These viruses are classified in New World (NW) Arenavirus, which is different from Old World Arenavirus (ex. Lassa virus), based on phylogeny, serology, and geographic differences. In this review, the current knowledge of the biology and the development of the vaccines and antivirals of NW Arenaviruses which cause South American Hemorrhagic Fever will be described.

南美出血热是由Arenavirus引起的,该病毒属于Arenaviridae科,属于哺乳病毒属,在南美洲感染。南美出血热包括1。朱宁病毒引起的阿根廷出血热,2。Sabia病毒引起的巴西出血热,3。瓜纳里托病毒引起的委内瑞拉出血热,4。玻利维亚马丘波病毒引起的出血热,以及5。查帕雷病毒引起的未指定的出血热。根据系统发育、血清学和地理差异,这些病毒被归类为新世界(NW)Arenavirus,这与旧世界Arenavivirus(例如Lassa病毒)不同。在这篇综述中,将介绍引起南美洲出血热的NW Arenavirus的生物学知识以及疫苗和抗病毒药物的开发。
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引用次数: 0
Infectivity-enhancing antibodies against SARS-CoV-2 抗SARS-CoV-2的增强感染抗体
Pub Date : 2022-01-01 DOI: 10.33611/trs.2021-021
Yafei Liu, Yukoh Nakazaki, Hisashi Arase
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引用次数: 0
[Investigation of viruses harbored by wild animals: toward pre-emptive measures against future zoonotic diseases]. [调查野生动物携带的病毒:针对未来人畜共患疾病采取先发制人的措施]。
Pub Date : 2022-01-01 DOI: 10.2222/jsv.72.79
Michihito Sasaki

Zoonoses are caused by pathogens transmitted from animals. To prepare mitigating measures against emerging zoonoses, it is imperative to identify animal reservoirs that carry potential pathogens and also elucidate the transmission routes of these pathogens. Under the continuous collaboration with counterparts from Zambia and Indonesia, we have so far identified various viruses in wild animals. Some of the identified viruses were phylogenetically distinct from known virus species and this finding led to approved new virus species by the International Committee on Taxonomy of Viruses (ICTV). Our studies provided new insights into the divergence, natural hosts and lifecycle of viruses. Through the exploration and characterization of viruses in animals, we will endeavor to contribute to the existing knowledge on viral pathogens in wild animals. This is cardinal for evidence-based preemptive measures against future zoonoses.

人畜共患病是由动物传播的病原体引起的。为了制定针对新出现的人畜共患疾病的缓解措施,必须确定携带潜在病原体的动物宿主,并阐明这些病原体的传播途径。在与赞比亚和印度尼西亚同行的持续合作下,我们迄今已在野生动物中发现了各种病毒。一些已鉴定的病毒在系统发育上与已知病毒物种不同,这一发现导致国际病毒分类委员会(ICTV)批准了新的病毒物种。我们的研究为病毒的分化、自然宿主和生命周期提供了新的见解。通过对动物体内病毒的探索和表征,我们将努力为现有的野生动物病毒病原体知识做出贡献。这对于预防未来人畜共患疾病的循证预防措施至关重要。
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引用次数: 0
[Molecular basis for the multiplication of negative-strand RNA viruses: basic research and potential applications in vaccine development]. 【负链RNA病毒增殖的分子基础:基础研究和在疫苗开发中的潜在应用】。
Pub Date : 2022-01-01 DOI: 10.2222/jsv.72.67
Masaharu Iwasaki

Viruses achieve their efficient reproduction by utilizing their limited components (nucleic acids, lipids, and proteins) and host cell machineries. A detailed understanding of virus-virus and virus-host interactions will lead to the elucidation of mechanisms underlying viral pathogenesis and the development of novel medical countermeasures. We elucidated the details of several such interactions and their roles in the multiplication of negative-strand RNA viruses, measles virus, and Lassa virus. These discoveries were harnessed to develop a novel genetic approach for the generation of live-attenuated vaccine candidates with a well-defined molecular mechanism of attenuation. This article describes our findings.

病毒通过利用其有限的成分(核酸、脂质和蛋白质)和宿主细胞机制实现有效繁殖。对病毒-病毒和病毒-宿主相互作用的详细了解将有助于阐明病毒发病机制和开发新的医学对策。我们阐明了几种这种相互作用的细节及其在负链RNA病毒、麻疹病毒和拉萨病毒增殖中的作用。这些发现被用来开发一种新的基因方法,用于产生具有明确的减毒分子机制的减毒活疫苗候选疫苗。这篇文章描述了我们的发现。
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引用次数: 0
[Introduction of high containment laboratories in abroad]. [国外引进高密封性实验室]。
Pub Date : 2022-01-01 DOI: 10.2222/jsv.72.139
Wakako Furuyama, Asuka Nanbo

Recently, outbreaks of highly pathogenic viruses, such as those of Ebola and Lassa viruses, have become a global public health issue. Such viruses must be handled in biosafety level 4 (BSL-4) laboratories. Currently, 62 BSL-4 laboratories are in operation, under construction, or planned in 24 counties. In this review, I provide an overview of the current status and characteristics of BSL-4 facilities in abroad and introduce my research on the wild-type Ebola virus at the BSL-4 facility in the USA.

最近,埃博拉病毒和拉沙病毒等高致病性病毒的爆发已成为全球公共卫生问题。此类病毒必须在生物安全等级为 4 级(BSL-4)的实验室中进行处理。目前,有 24 个国家的 62 个 BSL-4 实验室正在运行、建设或规划中。在这篇综述中,我将概述国外 BSL-4 设施的现状和特点,并介绍我在美国 BSL-4 设施中对野生型埃博拉病毒的研究。
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引用次数: 0
[Development of a positive pressure protective suit for BSL-4 laboratory]. [为 BSL-4 实验室开发正压防护服]。
Pub Date : 2022-01-01 DOI: 10.2222/jsv.72.131
Shintaro Shichinohe

Biosafety Level 4 (BSL-4) laboratories are required for research on microorganisms that are highly pathogenic to humans and for which there are no prevention or treatment methods. Currently, the majority of BSL-4 laboratories in more than 60 around the world are suit-type laboratories using positive pressure protective suits. In 2021, the first suit-type BSL-4 laboratory in Japan was constructed at Nagasaki University. Positive pressure protective suits are important as primary barriers to protect workers from pathogens, but the selection process has been largely unexplored. Here, I describe the selection process for the positive pressure protective suits to be used at the BSL-4 laboratory of Nagasaki University, and introduce a novel positive pressure protective suit (PS-790BSL4-AL), which was originally designed and produced in Japan.

生物安全等级 4 (BSL-4) 实验室是对人类高致病性微生物进行研究的必备条件,目前尚无预防或治疗方法。目前,全球 60 多个 BSL-4 实验室大多是使用正压防护服的套装型实验室。2021 年,日本首个套装式 BSL-4 实验室在长崎大学建成。正压防护服作为保护工作人员免受病原体侵害的主要屏障非常重要,但其选择过程在很大程度上尚未被探索。在此,我将介绍长崎大学 BSL-4 实验室使用的正压防护服的选择过程,并介绍日本最初设计和生产的新型正压防护服(PS-790BSL4-AL)。
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引用次数: 0
[Crimean-Congo hemorrhagic fever]. [克里米亚-刚果出血热]。
Pub Date : 2022-01-01 DOI: 10.2222/jsv.72.19
Keita Matsuno, Masayuki Saijo

Crimean-Congo hemorrhagic fever (CCHF) is an acute febrile illness with a high case fatality rate caused by the infection with Crimean-Congo hemorrhagic fever virus (CCHFV). The disease is endemic to a wide regions from the African continent to Asia through Europe. CCHFV is maintained in nature between Hyalomma species ticks and some species of animals. Humans are infected with CCHFV from CCHFV-positive tick bite or through a close contact with viremic animals in clucling hum am patients with CCHF. The CCHF-endemic regions depend on the distribution of the species of ticks such as Hyalomma species ticks, main vectors for CCHFV. There have been no confirmed cases of CCHF patients in Japan so far. CCHF is one of the zoonotic virus infections. Main clinical signs of the disease in humans are fever with nonspecific symptoms, and hemorrhage and deterioration in consciousness appear in severe cases. CCHF is classified in the disease category of viral hemorrhagic fevers, which include ebolavirus disease. Viral tick-borne diseases including tick-borne encephalitis, severe fever with thrombocytopenia syndrome, and Yezo virus infection, which has recently been discovered as a novel bunyavirus infection in Hokkaido, Japan, are becoming major concerns for public health in Japan. Trends of CCHF in terms of epidemiology should closely be monitored.

克里米亚-刚果出血热(CCHF)是由感染克里米亚-刚果出血性出血热病毒(CCHFV)引起的一种病死率较高的急性发热性疾病。这种疾病流行于从非洲大陆到亚洲再到欧洲的广大地区。CCHFV在自然界中维持在透明质瘤物种蜱和某些动物物种之间。人类感染CCHFV是由于CCHFV阳性蜱虫叮咬或通过与病毒血症动物的密切接触而感染的。CCHF流行区取决于蜱类的分布,如透明瘤蜱,CCHFV的主要媒介。到目前为止,日本还没有确诊CCHF患者的病例。CCHF是一种人畜共患病毒感染。这种疾病的主要临床症状是发烧,症状非特异性,严重时出现出血和意识退化。CCHF属于病毒性出血热的疾病类别,其中包括埃博拉病毒病。病毒性蜱传疾病,包括蜱传脑炎、伴有血小板减少综合征的严重发烧和Yezo病毒感染,最近在日本北海道被发现为一种新型的布尼亚病毒感染,正在成为日本公众健康的主要问题。应密切监测CCHF在流行病学方面的趋势。
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引用次数: 0
[Grasping COVID-19 immune landscape in Japan]. 【把握日本新冠肺炎免疫景观】。
Pub Date : 2022-01-01 DOI: 10.2222/jsv.72.31
Misaki Sasanami, Hiroshi Nishiura

COVID-19 vaccination commenced globally in December 2020. Japan launched its vaccination rollout on February 17, 2021 and commenced booster vaccination campaign on December 1, 2021. It has been crucial to grasp the immune landscape in the country in order to aid in decision-making and evaluation of vaccination campaigns as well as understating the transmission dynamics of various variants of SARS-CoV-2. The present article shows a framework that enables us to predict the immune landscape, specifically, the proportion of immune population, using a mathematical modeling approach. This involved: prediction of vaccine coverage; estimation of vaccine effectiveness against the dominant SARS-CoV-2 variant in circulation; the quantification of increasing vaccine effectiveness (immune-build up) since receiving the first dose; the estimation of waning rate of vaccine effectiveness since receiving the second and third doses; and the consideration on the infection-induced immunity.

新冠肺炎疫苗接种于2020年12月在全球开始。日本于2021年2月17日启动疫苗接种,并于2021年12月1日开始加强针接种活动。掌握该国的免疫状况至关重要,有助于疫苗接种活动的决策和评估,以及了解严重急性呼吸系统综合征冠状病毒2型各种变种的传播动态。本文展示了一个框架,使我们能够使用数学建模方法预测免疫景观,特别是免疫群体的比例。这涉及:疫苗覆盖率的预测;评估疫苗对流通中占主导地位的严重急性呼吸系统综合征冠状病毒2型变异株的有效性;自接种第一剂疫苗以来疫苗有效性增加(免疫增强)的量化;自接种第二剂和第三剂以来疫苗有效性下降率的估计;以及对感染诱导免疫的思考。
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引用次数: 0
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Uirusu
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