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Interpreting the Epidemiological Characteristics of HIV-1 in Heterosexually Transmitted Population Based on Molecular Transmission Network in Kunming, Yunnan: A Retrospective Cohort Study. 基于分子传播网络解读云南昆明异性传播人群的 HIV-1 流行特征:一项回顾性队列研究。
IF 1.5 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-10-17 DOI: 10.1089/aid.2023.0137
Peng Cheng, Bao-Cui He, Zhi-Xing Wu, Jia-Fa Liu, Jia-Li Wang, Cui-Xian Yang, Sha Ma, Mi Zhang, Xing-Qi Dong, Jian-Jian Li

Heterosexuals have become the most prevalent group of HIV-1 in Kunming, Yunnan Province. Utilizing the principle of genetic similarity between their gene sequences, we built a molecular transmission network by gathering data from earlier molecular epidemiological studies. This allowed us to analyze the epidemiological features of this group and offer fresh concepts and approaches for the prevention and management of HIV-1 epidemics. Cytoscope was used to visualize and characterize the network following the processing of the sample gene sequences by BioEdit and HyPhy. The number of possible links and the size of the clusters were investigated as influencing factors using a zero-inflated Poisson model and a logistic regression model, respectively. A scikit-learn-based prediction model was developed to account for the dynamic changes in the HIV-1 molecular network. Six noteworthy modular clusters with network scores ranging from 4 to 9 were found from 150 clusters using Molecular Complex Detection analysis at a standard genetic distance threshold of 0.01. The size of the number of possible links and the network's clustering rate were significantly impacted by sampling time, marital status, and CD4+ T lymphocytes (all p < 0.05). The gradient boosting machine (GBM) model had the highest area under the curve value, 0.884 ± 0.051, according to scikit-learn. Though not all cluster subtypes grew equally, the network clusters were relatively specific and aggregated. The largest local transmission-risk group for HIV-1CRF08_BC is now the heterosexual transmission population. The most suitable model for constructing the HIV-1 molecular network dynamics prediction model was found to be the GBM model.

异性恋者已成为云南省昆明市 HIV-1 的高发人群。我们利用其基因序列之间的遗传相似性原理,通过收集早期分子流行病学研究的数据,建立了一个分子传播网络。这使我们能够分析该群体的流行病学特征,并为预防和管理 HIV-1 流行病提供新的概念和方法。在使用 BioEdit 和 HyPhy 处理样本基因序列后,我们使用 Cytoscope 对网络进行了可视化和特征描述。使用零膨胀泊松模型和逻辑回归模型分别研究了可能链接的数量和聚类大小的影响因素。为了解释 HIV-1 分子网络的动态变化,我们开发了一个基于 scikit-learn 的预测模型。在标准遗传距离阈值为 0.01 的条件下,通过分子复杂性检测分析,从 150 个簇中发现了 6 个值得注意的模块簇,其网络得分从 4 到 9 不等。取样时间、婚姻状况和 CD4+ T 淋巴细胞对可能链接数的大小和网络聚类率有显著影响(均 p < 0.05)。根据 scikit-learn 方法,梯度提升机(GBM)模型的曲线下面积值最高,为 0.884 ± 0.051。虽然并非所有群组亚型的增长都相同,但网络群组相对特殊且聚集。目前,HIV-1CRF08_BC 在当地最大的传播风险群体是异性传播人群。研究发现,最适合构建 HIV-1 分子网络动力学预测模型的是 GBM 模型。
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引用次数: 0
Long-Term Follow-Up of Persons Living with Perinatally Acquired HIV Infection at a Large HIV Treatment Clinic in Trinidad. 特立尼达岛一家大型艾滋病治疗诊所对围产期感染艾滋病毒者的长期随访。
IF 1.5 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-10-17 DOI: 10.1089/aid.2024.0052
Jonathan Edwards, Gregory Boyce, Nyla Lyons, Selena Todd, Wendy Samaroo Francis, Elise Raeburn, Robert Jeffrey Edwards

Data on persons with perinatally acquired HIV infection in the Caribbean are limited; thus, a chart review was conducted among these clients at an adult HIV treatment clinic in Trinidad over the period January 01, 2011-June 30, 2023. Sociodemographic, clinical, and laboratory data were extracted and analyzed using RStudio version 2021.09.0. Fifty-four study participants were followed up, age range 18-29 years, and there were 27 (50%) males. Eighteen participants (33.3%) were institutionalized until the age of 18 years, while 36 (66.7%) lived with caregivers/relatives and attended outpatient pediatric clinic. The transition from the sheltered environment of pediatric care to the adult HIV clinic was turbulent for some participants as they experienced HIV-related stigma, which may result in poor HIV outcomes. At the initial clinic visit, 28 (51.9%) study participants were virally suppressed (HIV viral load <1,000 copies/mL), which included 12 (66.7%) of 18 who were institutionalized as compared to 16 (44.4%) of 38 who lived with caregivers/relatives (p = 0.387). Data from their last clinic visit showed 31 (57.4%) participants were virally suppressed; 13 (24.1%) were lost to follow-up from care, and there were 6 (11.1%) deaths; 29 (53.7%) were on antiretroviral therapy single-tablet regimens (STRs) and 25 (46.3%) on complex multiple-tablet regimens (MTRs). Institutionalized clients and those on STRs were more likely to be virally suppressed than those living with relatives (p = 0.043) and those on MTR (p < 0.001), respectively. Reported deaths were higher among clients who lived with caregivers/relatives and those on MTR. Participants of younger age were less likely to achieve viral suppression (p = 0.02). Comprehensive programs that include STRs, the engagement of caregivers/relatives and health workers, life skills, and enhanced psychosocial interventions for youths living with perinatally acquired HIV are important to support the transition to adult care and reduce the complex challenges of living with a stigmatizing disease.

有关加勒比海地区围产期感染艾滋病病毒者的数据十分有限;因此,我们在特立尼达岛的一家成人艾滋病治疗诊所对这些患者在 2011 年 1 月 1 日至 2023 年 6 月 30 日期间的病历进行了回顾。研究人员使用 RStudio 2021.09.0 版本提取并分析了社会人口学、临床和实验室数据。54名研究参与者接受了随访,年龄在18-29岁之间,其中27人(50%)为男性。18名参与者(33.3%)在18岁前一直住在福利院,36名参与者(66.7%)与照顾者/亲属同住,并到儿科门诊就诊。从儿科护理的庇护环境过渡到成人艾滋病门诊,对一些参与者来说是一个动荡的过程,因为他们经历了与艾滋病相关的耻辱,这可能会导致不良的艾滋病结果。在首次就诊时,28 名(51.9%)研究参与者的病毒得到了抑制(HIV 病毒载量 p = 0.387)。最后一次门诊的数据显示,31 名参与者(57.4%)的病毒得到抑制;13 名参与者(24.1%)失去了护理随访,6 名参与者(11.1%)死亡;29 名参与者(53.7%)正在接受抗逆转录病毒治疗单药方案(STR),25 名参与者(46.3%)正在接受复杂的多药方案(MTR)。与与亲属同住者(p = 0.043)和使用复合多药治疗方案者(p < 0.001)相比,住在机构中的患者和使用单药治疗方案者更有可能被病毒抑制。与照顾者/亲属同住和服用 MTR 的受试者报告的死亡人数较高。年龄较小的参与者实现病毒抑制的可能性较低(p = 0.02)。对于围产期感染艾滋病病毒的青少年来说,包括STR、照顾者/亲属和卫生工作者的参与、生活技能和强化的社会心理干预在内的综合计划对于支持他们向成人护理过渡以及减少他们因患有耻辱性疾病而面临的复杂挑战非常重要。
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引用次数: 0
The Climate Change Burden on Immune Health: Are Persons Living with HIV More at Risk? 气候变化对免疫健康造成的负担:艾滋病毒感染者面临的风险更大吗?
IF 1.5 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-10-01 Epub Date: 2024-05-27 DOI: 10.1089/AID.2024.0050
Griffin Woolley, Kyle Kroll, Kate Hoffman, Ashley Ward, Amy Corneli, Sarah V Mudrak, M Umar Qureshi, N Lance Okeke, Cliburn Chan, Akhenaton-Andrew D Jones, Georgia D Tomaras, R Keith Reeves

Climate change poses one of the most significant modern threats to overall human health,especially for vulnerable populations including persons living with HIV (PLWH). In this perspective, we specifically explore the concept of immune resilience in human health and how climate change phenomena - including extreme weather events, food insecurity, pollution, and emerging diseases - may exacerbate immune dysfunction and comorbidities faced by PLWH and hinder access to HIV treatment and prevention services. Multidisciplinary, collaborative efforts are urgently needed to quantify these impacts, develop mitigation strategies, and strengthen policies and funding to bolster immune resilience for PLWH in the face of accelerating climate change.

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引用次数: 0
Study APV20002: Safety and Efficacy Results Through Week 684 for Pediatric Participants Living with HIV-1 Treated with Ritonavir-Boosted Fosamprenavir Oral Solution-Based Antiretroviral Therapy. APV20002 研究:基于利托那韦-增强型福沙那韦口服溶液的抗逆转录病毒疗法对感染 HIV-1 病毒的儿童参与者进行治疗至第 684 周的安全性和有效性结果。
IF 1.5 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-10-01 Epub Date: 2024-07-19 DOI: 10.1089/AID.2024.0020
Lisa L Ross, Mark F Cotton, Haseena Cassim, Harmony P Garges, Sven C van Dijkman, Kishen Morarji, Supriya Karthika, Susan Danehower, Jacob Radford, David Butcher

APV20002 was a multicenter, international, open-label study that began in 2003 investigating the pharmacokinetics, efficacy, and safety of ritonavir-boosted fosamprenavir (FPV/r) oral solution (OS) in combination with nucleoside reverse transcriptase inhibitor-based antiretroviral therapy (ART) in participants living with HIV-1 aged 4 weeks to <2 years with a primary endpoint at Week 48 (48W). Participants in APV20002 could continue in the study post-48W until FPV OS was locally available in their countries. Children were required to discontinue after reaching >39 kg or if FPV OS had no clinical benefit. Fifty-nine participants were enrolled; 5/59 received a single FPV OS visit for pharmacokinetic determinations. Most (38/54; 70%) were antiretroviral experienced; 39/59 participants had >48 weeks on treatment, 4/39 of whom discontinued after 48 weeks due to an adverse event (AE). At 48W, 88% of participants had HIV-1 RNA <400 copies/mL by Observed analysis; the proportion with HIV-1 RNA <400 copies/mL remained high (84%-100%) through Week 684. The median CD4+ cell count was 1,235 cells/mm3 [n = 51] at baseline, 1,690 cells/mm3 (n = 41) at Week 48, and 1,280 cells/mm3 (n = 21) at Week 180. From baseline to Week 684, 54/59 (92%) participants had ≥1 treatment-emergent AE regardless of causality; 42/59 (71%) had a treatment-emergent grade 2-4 AE, predominantly maximum toxicity: grade 2; 21/59 (36%) and 21/59 (36%) had severe or grade 3/4 AEs. From baseline to Week 684, 14/54 (26%) participants met virologic failure (VF) criteria, 9/14 before 48W. HIV from 1/9 VFs through 48W developed treatment-emergent reduced susceptibility to FPV and 1/9 to lamivudine/emtricitabine. Post-48W, 4/5 participants with VF had phenotype results; all were still susceptible to all study drugs at VF. In conclusion, FPV OS-based ART was efficacious and generally well tolerated in this long-running pediatric study through 684 weeks of treatment, with a safety profile consistent with experience in adults and older children.

APV20002 是一项多中心、国际性、开放标签研究,始于 2003 年,旨在调查利托那韦增效福沙那韦口服溶液(FPV/r)与核苷类逆转录酶抑制剂类抗逆转录病毒疗法(ART)联用的药代动力学、疗效和安全性,研究对象为年龄在 4 周至 39 公斤之间的 HIV-1 感染者,或者 FPV OS 无临床疗效。59名参与者接受了治疗,其中5/59接受了一次FPV OS的药代动力学测定。大多数参与者(38/54;70%)有抗逆转录病毒经历;39/59 名参与者的治疗时间超过 48 周,其中 4/39 名参与者在 48 周后因不良事件(AE)而中断治疗。48 周时,88% 的参与者的 HIV-1 RNA
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引用次数: 0
In Utero Mother-to-Child Transmission of HIV-1 and the Associated Factors in Rwanda, Africa. 非洲卢旺达 HIV-1 的宫内母婴传播及相关因素。
IF 1.5 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-10-01 Epub Date: 2024-05-21 DOI: 10.1089/aid.2023.0117
Gad Rutayisire, Emmanuel Ssemwanga, Roman Ntale, Uwera Marie Grace, Jean Pierre Gashema, Paul Gasana, Enock Wekia, Noah Kiwanuka, Bernard Ssentalo Bagaya

Mother-to-child transmission (MTCT) of HIV-1 and associated mortality continue to occur at unacceptably high rates, despite the extensive rollout and implementation of Prevention of Mother-to-Child Transmission (PMTCT) Programs, including the modified versions of Option B and B+ in 2010 and 2012, respectively. Maternal HIV viral load (VL) and socio-behavioral factors sustaining MTCT in Rwanda remain largely unexplored. The study examined the effects of socio-behavioral factors on maternal VL and their contribution to in utero transmission of HIV-1 in the context of Rwanda's HIV epidemic. A prospective cohort study was conducted in 862 mother-baby pairs enrolled in 10 PMTCT clinics in Rwanda. VL was determined on plasma and Dried Blood Spots samples, whereas HIV DNA PCR was performed to determine in utero MTCT of HIV of the babies immediately at birth and then at 3 weeks, 4 weeks, 6 months, and 18 months, together with HIV antibody testing to determine other forms of MTCT of HIV. Quantitative data on socio-behavioral factors were collected through a structured questionnaire. Linear regression and univariate analysis of variances using SPSS 25.0 were used to test the hypotheses. We found 22/862 (2.55%) cases of in utero transmission and a total of 32/862 (3.7%) cases of MTCT of HIV-1 over 18 study months. Maternal VL at delivery was significantly associated with the risk of in utero transmission of HIV-1. Socio-behavioral factors associated with elevated maternal VL at delivery included alcohol, smoking, multiple sexual partners, mothers' income, being a casual laborer, and distance to health care services. We report an MTCT rate of 3.7% in our study population over the 18 months, higher than the national average of 1.5%, the majority of which occurred in utero. MTCT cases were attributable to failure to suppress maternal VL.

尽管卢旺达广泛推广和实施了预防母婴传播计划(PMTCT),包括分别于 2010 年和 2012 年推出的 B 方案和 B+ 方案的修订版,但 HIV-1 的母婴传播率和相关死亡率仍然高得令人无法接受。在卢旺达,孕产妇艾滋病毒病毒载量(VL)和社会行为因素在很大程度上仍未得到探讨。本研究探讨了社会行为因素对孕产妇病毒载量的影响,以及在卢旺达艾滋病流行的背景下,这些因素对子宫内传播 HIV-1 病毒的作用。该研究对卢旺达 10 家预防母婴传播诊所登记的 862 对母婴进行了前瞻性队列研究。对血浆和干血斑样本进行了 VL 检测,而对艾滋病毒 DNA PCR 进行了检测,以确定婴儿出生后立即以及在 3 周、4 周、6 个月和 18 个月时在子宫内是否发生了艾滋病毒母婴传播,同时还进行了艾滋病毒抗体检测,以确定其他形式的艾滋病毒母婴传播。通过结构化问卷收集了有关社会行为因素的定量数据。使用 SPSS 25.0 进行线性回归和单变量方差分析来检验假设。在 18 个月的研究中,我们发现了 22/862 例(2.55%)子宫内传播病例和 32/862 例(3.7%)母婴传播病例。产妇分娩时的 VL 与宫内传播 HIV-1 的风险明显相关。与产妇分娩时 VL 升高相关的社会行为因素包括:酗酒、吸烟、多个性伴侣、母亲收入、临时工以及距离医疗服务机构的距离。我们的报告显示,在 18 个月的研究中,母婴传播率为 3.7%,高于全国 1.5% 的平均水平,其中大部分发生在子宫内。母婴传播病例可归因于未能抑制母体 VL。
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引用次数: 0
The Global Impact of Diversifying PrEP Options: Results of an International Discrete Choice Experiment of Existing and Potential PrEP Strategies with Gay and Bisexual Men and Physicians. 多样化 PrEP 选择的全球影响:针对男同性恋者、双性恋者(GBM)和医生的现有和潜在 PrEP 策略的国际离散选择实验结果》(PrEP International Discrete Choice Experiment of Existing and Potential PrEP Strategies with Gay and Bisexual Men (GBM) and Physicians)。
IF 1.5 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-10-01 Epub Date: 2024-05-28 DOI: 10.1089/AID.2023.0120
Christine Tagliaferri Rael, Rebecca Giguere, Ewa Bryndza Tfaily, Sara Sutton, Elizabeth Horn, Robert J Schieffer, Craig Hendrix, Richard T D'Aquila, Thomas J Hope

To improve current and future use of existing (oral, injectable) and potential future (implants, douches) pre-exposure prophylaxis (PrEP) products, we must understand product preferences relative to one another, among gay and bisexual men (GBM), and physicians who prescribe PrEP. We completed an online discrete choice experiment (DCE) with separate groups of GBM and/or physicians from the United States, South Africa, Spain, and Thailand. Participants were presented information on PrEP products, including daily pills, event-driven pills (2-1-1 regimen), injections, subdermal implants (dissolvable, removable), and rectal douches. Next, they completed a choice exercise in which they were shown 10 screens, each presenting 3 of the aforementioned products at a time with 11 attributes for physicians and 10 attributes for GBM. For the attributes that were not constant, one level was shown per screen for each product. Participants selected the product they preferred most and rated their likelihood to select (GBM) or recommend (physicians) that product. Data were modeled using hierarchical Bayes estimation; resulting model coefficients were used to develop attribute importance measures and product preferences. For GBM across all countries, if all aforementioned PrEP products were on the market at the same time, over 90% of GBM would use some form of PrEP; 100% of physicians would recommend at least one of the PrEP products. There were variations in product preference by country. GBM in the United States and Thailand preferred the injection (21.7%, 22.9%, respectively), while the dissolvable implant was preferred in South Africa and Spain (19.9%, 19.8%, respectively). In the United States, South Africa, and Spain (where physician data were available), physicians were most likely to recommend the dissolvable implant (37.2%, 40.6%, 38.3%, respectively).

为了提高现有(口服、注射)和未来潜在(植入、冲洗)PrEP 产品的使用率,我们必须了解男同性恋和双性恋者(GBM)以及开具 PrEP 处方的医生对产品的偏好。我们与来自美国、南非、西班牙和泰国的男同性恋者和/或医生分别进行了一次在线离散选择实验(DCE)。实验向参与者展示了 PrEP 产品的相关信息,包括每日药片、事件驱动药片(2-1-1 方案)、注射剂、皮下植入物(可溶解、可移除)和直肠冲洗剂。接下来,他们完成了一个选择练习,在这个练习中,他们会看到 10 个屏幕,每个屏幕一次显示上述产品中的三种,其中医生有 11 个属性,GBM 有 10 个属性。对于不固定的属性,每种产品在每个屏幕上显示一个等级。参与者选择他们最喜欢的产品,并对他们选择(GBM)或推荐(医生)该产品的可能性进行评分。使用层次贝叶斯估计法对数据进行建模;得出的模型系数用于制定属性重要性度量和产品偏好。对于所有国家的 GBM 而言,如果上述所有 PrEP 产品同时上市,90% 以上的 GBM 会使用某种形式的 PrEP;100% 的医生会推荐至少一种 PrEP 产品。不同国家对产品的偏好存在差异。美国和泰国的 GBM 首选注射剂(分别为 21.7%和 22.9%),而南非和西班牙的 GBM 首选可溶解植入剂(分别为 19.9%和 19.8%)。在美国、南非和西班牙(有医生数据),医生最有可能推荐可溶解性植入物(分别为 37.2%、40.6% 和 38.3%)。
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引用次数: 0
The Effect of Efavirenz on Reward Processing in Asymptomatic People Living with HIV: A Randomized Controlled Trial. 埃非韦仑对无症状 HIV 感染者奖赏处理的影响:随机对照试验
IF 1.5 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-10-01 Epub Date: 2023-03-16 DOI: 10.1089/AID.2022.0069
Patrick G A Oomen, Charlotte S Hakkers, Joop E Arends, Guido E L van der Berk, Pascal Pas, Andy I M Hoepelman, Berend J van Welzen, Stefan du Plessis

Functional magnetic resonance imaging (fMRI) studies have demonstrated that HIV-infection affects the fronto-striatal network. It has not been examined what impact efavirenz (EFV), an antiretroviral drug notorious for its neurocognitive effects, has on the reward system: a key subcomponent involved in depressive and apathy symptoms. Therefore, this study aims to investigate the effect of EFV on reward processing using a monetary incentive delay (MID) task. In this multicenter randomized controlled trial, asymptomatic adult participants stable on emtricitabine/tenofovirdisoproxil fumarate (FTC/TDF)/EFV were randomly assigned in a 2:1 ratio to switch to FTC/TDF/rilpivirine (RPV) (n = 30) or continue taking FTC/TDF/EFV (n = 13). At baseline and 12 weeks after therapy switch, both groups performed an MID task. Behavior and functional brain activity related to reward anticipation and reward outcome were assessed with blood-oxygen-level-dependent fMRI. Both groups were matched for age, education level, and time since HIV diagnosis and on EFV. At the behavioral level, both groups had faster response times and better response accuracy during rewarding versus nonrewarding trials, with no improvement resulting from switching FTC/TDF/EFV to FTC/TDF/RPV. No significant change in activation related to reward anticipation in the ventral striatum was found after switching therapy. Both groups had significantly higher activation levels over time, consistent with a potential learning effect. Similar activity related to reward outcome in the orbitofrontal cortex was found. Discontinuing FTC/TDF/EFV was not found to improve activity related to reward anticipation in asymptomatic people living with HIV, with similar cortical functioning during reward outcome processing. It is therefore likely that EFV does not affect motivational control. Further research is needed to determine whether EFV affects motivational control in HIV populations with different characteristics.

功能磁共振成像(fMRI)研究表明,艾滋病病毒感染会影响前叶-纹状体网络。依非韦伦(EFV)是一种因其神经认知效应而臭名昭著的抗逆转录病毒药物,它对奖赏系统(抑郁和冷漠症状的一个关键子组件)有什么影响还没有研究过。因此,本研究旨在通过货币激励延迟(MID)任务研究 EFV 对奖赏处理的影响。在这项多中心随机对照试验中,稳定服用恩曲他滨/富马酸替诺福韦酯(FTC/TDF)/EFV的无症状成年参与者按2:1的比例被随机分配到转用FTC/TDF/利匹韦林(RPV)(n = 30)或继续服用FTC/TDF/EFV(n = 13)。在基线期和转换疗法 12 周后,两组患者都进行了一项 MID 任务。通过血氧水平依赖性 fMRI 评估与奖赏预期和奖赏结果相关的行为和大脑功能活动。两组患者的年龄、受教育程度、确诊 HIV 后的时间以及服用 EFV 的时间均相匹配。在行为层面上,两组患者在奖励试验和非奖励试验中的反应时间更快,反应准确性更高,但将 FTC/TDF/EFV 改为 FTC/TDF/RPV 并没有改善反应时间和反应准确性。转换疗法后,腹侧纹状体中与奖赏预期相关的激活没有明显变化。随着时间的推移,两组的激活水平都明显升高,这与潜在的学习效应一致。在眶额皮层也发现了与奖赏结果相关的类似活动。在无症状的艾滋病病毒感染者中,停用 FTC/TDF/EFV 并未改善与奖赏预期相关的活动,而在奖赏结果处理过程中,大脑皮层的功能相似。因此,EFV可能不会影响动机控制。要确定 EFV 是否会影响具有不同特征的 HIV 感染者的动机控制,还需要进一步的研究。
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引用次数: 0
Letter to the Editor: Real-Life Experience of Long-Acting Cabotegravir-Rilpivirine Combination in a Person Living with HIV with Detectable Viremia: A Case Report. 一名检测到病毒血症的艾滋病病毒感染者使用长效卡博替拉韦-利匹韦林复方制剂的真实体验:病例报告。
IF 1.5 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-10-01 Epub Date: 2024-02-02 DOI: 10.1089/AID.2023.0057
Arturo Ciccullo, Valentina Iannone, Francesca Lombardi, Alberto Borghetti, Simona Di Giambenedetto
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引用次数: 0
Near Full-Length Genome Characterization of Two Novel Unique Recombinants (CRF01_AE/CRF07_BC) in Beijing, China. 中国北京两个新型独特重组体(CRF01_AE/CRF07_BC)的近全长基因组特征。
IF 1.5 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-10-01 Epub Date: 2024-04-16 DOI: 10.1089/AID.2023.0149
Chunlin Lan, Bo Zhu, Hailong Zhuo, Yuting Shi, Zixuan Sun, Lixuan Zhang, Lei Jia, Hanping Li, Yongjian Liu, Xiaolin Wang, Jingyun Li, Bohan Zhang, Jingwan Han, Junjun Jiang, Lin Li

With the prevalence of human immunodeficiency virus type 1 (HIV-1) CRF01_AE and CRF07_BC subtypes in China, the co-circulation of multiple subtypes in the HIV-1-positive population may result in dual infection or superinfection in the population, leading to the emergence of unique recombinant forms (URFs) of the HIV-1 virus. In this study, two second-generation unique recombinant strains, BI0114 and BI0116, were identified, and their near full-length genome sequences were obtained. Recombination analysis showed that both sequences were isoforms of URF_0107, and they were second-generation unique recombinant strains formed by the recombination of CRF01_AE and CRF07_BC, with the isoforms being CRF01_AE and CRF0107_BC, respectively. The continued emergence of novel CRF01_AE/CRF07_BC recombinant strains suggests that the epidemiological, preventive, and control situation of HIV-1 is complex and that the relevant health authorities urgently need to establish responses to the challenges posed by changes in the pattern of strain recombination.

随着HIV-1 CRF01_AE和CRF07_BC亚型在中国的流行,多种亚型在HIV-1阳性人群中的共同流行可能导致人群的双重感染或超级感染,从而导致HIV-1病毒独特重组型(URF)的出现。本研究发现了两个第二代独特重组株 BI0114 和 BI0116,并获得了它们的近全长基因组序列;重组分析表明,这两个序列都是 URF_0107 的同工型,它们是由 CRF01_AE 和 CRF07_BC 重组形成的第二代独特重组株,同工型分别为 CRF01_AE 和 CRF0107_BC。新型CRF01_AE/CRF07_BC重组株的不断出现,表明HIV-1的流行和防控形势错综复杂,相关卫生部门亟需建立应对毒株重组模式变化的挑战。
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引用次数: 0
Characterization of Two Novel HIV-1 CRF01_AE/ CRF07_BC Recombinant Forms Among Men Who Have Sex with Men and Mother-to-Child Transmission Cases in Baoding City, China. 中国保定市男男性行为者和母婴传播病例中两种新型 HIV-1 CRF01_AE/ CRF07_BC 重组形式的特征。
IF 1.5 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-09-18 DOI: 10.1089/aid.2024.0059
Jianru Jia,Huijuan Yang,Zhen Zhang,Haoxi Shi,Sisi Chen,Shi Penghui,Weiguang Fan
CRF01_AE and CRF07_BC are predominant circulating HIV-1 subtypes in China. In this study, we report two novel HIV-1 CRF01_AE/CRF07_BC recombinant forms isolated from one man who has sex with men (MSM) (BDD027) and one mother-to-child transmission (MTCT) case (BDL123) in Baoding City, Hebei Province, China. The recombination breakpoint analysis showed that the recombination pattern of the near-full-length genome of BDD027 consisted of two CRF07_BC fragments inserted into a CRF01_AE backbone, while the recombination pattern of the near-full-length genome of BDL123 consisted of one CRF01_AE fragment inserted into a CRF07_BC backbone. This study demonstrates the importance of strengthening the monitoring of HIV-1 molecular epidemiological characteristics and emphasizes the urgent need to reduce the HIV-1 epidemic among MSM and MTCT populations in China.
CRF01_AE 和 CRF07_BC 是中国流行的 HIV-1 亚型。本研究报告了从河北省保定市一名男男性行为者(MSM)(BDD027)和一名母婴传播(MTCT)病例(BDL123)中分离出的两种新型 HIV-1 CRF01_AE/CRF07_BC重组型。重组断点分析表明,BDD027近全长基因组的重组模式由两个CRF07_BC片段插入CRF01_AE骨架组成,而BDL123近全长基因组的重组模式由一个CRF01_AE片段插入CRF07_BC骨架组成。这项研究表明了加强HIV-1分子流行病学特征监测的重要性,并强调了减少HIV-1在中国男男性行为人群和母婴传播人群中流行的紧迫性。
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引用次数: 0
期刊
AIDS research and human retroviruses
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