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Confocal microscopy and three-dimensional reconstruction of thick, transparent, vital tissue. 共聚焦显微镜和三维重建厚,透明,重要组织。
Pub Date : 1992-01-01
B R Masters

The three-dimensional visualization of the 400 micron thick, transparent, in situ cornea is described to demonstrate the use of confocal light microscopy for noninvasive imaging of living cells and thick tissues in their normal, vital conditions. Specimen preparation and physiological stability, as well as light attenuation corrections are critical to data acquisition. The technique to provide mechanical stability of the specimen during the duration of the image acquisition is explained. A laser scanning confocal light microscope (LSCM) was used to obtain optical serial sections from rabbit eyes that were freshly removed and placed in a physiological Ringer's solution. This study demonstrates the capability of the confocal light microscope to obtain a series of high contrast images, with a depth resolution of one micron, across the full thickness of living, transparent tissue. The problems of nonisotropic sampling and the limited eight-bit dynamic range are discussed. The three-dimensional reconstructions were obtained by computer graphics using the volume visualization projection technique. The three-dimensional visualization of the cornea in the in situ eye is presented as an example of image understanding of thick, viable biological cells and tissues. Finally, the criterion of image fidelity is explained. The techniques of confocal light microscopy with its enhanced lateral and axial resolution, improved image contrast, and volume visualization provides microscopists with new techniques for the observation of vital cells and tissues, both in vivo and in vitro.

三维可视化的400微米厚,透明,原位角膜描述,以证明使用共聚焦光显微镜对活细胞和厚组织在其正常,重要的条件下的无创成像。标本制备和生理稳定性,以及光衰减校正对数据采集至关重要。解释了在图像采集期间提供样品机械稳定性的技术。用激光扫描共聚焦光学显微镜(LSCM)对刚取出的兔眼进行光学序列切片,并将其置于生理林格氏溶液中。本研究证明了共聚焦光学显微镜能够获得一系列高对比度图像,深度分辨率为1微米,跨越活的透明组织的全厚度。讨论了非各向同性采样和有限8位动态范围的问题。采用体可视化投影技术,通过计算机图形学获得三维重建结果。角膜在原位眼的三维可视化是一个例子,图像理解厚的,有活力的生物细胞和组织。最后,对图像保真度的判据进行了说明。共聚焦光显微镜技术以其增强的横向和轴向分辨率、改进的图像对比度和体积可视化为显微镜学家提供了观察活体和体外重要细胞和组织的新技术。
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引用次数: 0
Alignment, classification, and three-dimensional reconstruction of single particles embedded in ice. 冰中单个粒子的定位、分类和三维重建。
Pub Date : 1992-01-01
J Frank, P Penczek, W Liu

Cryo-electron microscopy of single biological particles poses new challenges to digital image processing due to the low signal-to-noise ratio of the data. New tools have been devised to deal with important aspects of 3-D reconstruction following the random-conical data collection scheme: (a) a new shift-invariant function has been derived, which promises to facilitate alignment and classification of single particle projections; (b) a new method of orientation search is proposed, which makes it possible to relate random-conical data sets to one another prior to reconstruction; and (c) the foundation is laid for a 3-D variance estimation which utilizes the oversampling of 3-D angular space by projections in the random-conical reconstruction scheme.

单个生物粒子的低温电子显微镜由于数据的低信噪比,对数字图像处理提出了新的挑战。根据随机圆锥数据收集方案,设计了新的工具来处理三维重建的重要方面:(a)推导了一个新的移位不变函数,它有望促进单粒子投影的对齐和分类;(b)提出了一种新的方向搜索方法,使随机圆锥数据集能够在重建之前相互关联;(c)为利用随机圆锥重构方案中投影对三维角空间进行过采样的三维方差估计奠定了基础。
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引用次数: 0
Three-dimensional crystallographic reconstruction for atomic resolution. 原子分辨率的三维晶体重建。
Pub Date : 1992-01-01
K H Downing

Three-dimensional structures have recently been determined by electron crystallography at a resolution high enough to determine atomic arrangements in both protein and mineral specimens. The different nature of these two types of specimens produces some very significant differences in the way data is obtained and processed, although the principles are the same. The sensitivity of proteins to damage by the electron beam limits the signal-to-noise ratio in the image and the resolution to which data can be extracted from the image. A number of constraints, such as the amino acid sequence and the connectivity of atoms within amino acids, can be used in interpreting the limited image data. In materials samples, the relative insensitivity to damage allows obtaining resolution limited only by the microscope. In many samples, dynamical scattering and other non-linear effects limit the information in the image, but this limit can be circumvented by working in very thin areas of the specimen.

最近,三维结构已被电子晶体学确定,其分辨率足以确定蛋白质和矿物标本中的原子排列。尽管原理相同,但这两种类型标本的不同性质在数据获取和处理方式上产生了一些非常显著的差异。蛋白质对电子束损伤的敏感性限制了图像中的信噪比和从图像中提取数据的分辨率。许多限制,如氨基酸序列和氨基酸内原子的连通性,可用于解释有限的图像数据。在材料样品中,对损伤的相对不敏感使得只能通过显微镜才能获得分辨率。在许多样品中,动态散射和其他非线性效应限制了图像中的信息,但可以通过在样品的非常薄的区域进行工作来绕过这一限制。
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引用次数: 0
Freezing: facts and hypothesis. 冻结:事实和假设。
Pub Date : 1991-01-01
J Dubochet, K Richter, H V Roy, A W McDowall

Hexagonal ice crystals formed in frozen biological specimens are large and branched. They can produce severe structural damage by solute segregation but there are also cases where they seem to cause only minor damage. When cooling is more rapid, cubic ice crystals can be formed. These are small and in general, they cause little damage. These observations can be readily explained with the hypothesis that large hexagonal ice crystals can originate from the rewarming induced transformation of a large number of cubic ice crystals. This transformation would take place without significant solute displacement.

在冷冻的生物标本中形成的六方冰晶大而分枝。由于溶质偏析,它们可以造成严重的结构破坏,但也有一些情况下,它们似乎只造成轻微的破坏。当冷却更快时,可以形成立方冰晶。这些都很小,一般来说,它们造成的损害很小。这些观测结果可以很容易地用一个假设来解释,即大的六边形冰晶可以起源于大量立方冰晶的再变暖引起的转变。这种转变不会发生明显的溶质位移。
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引用次数: 0
Cryopreparation of tissue for clinical applications of X-ray microanalysis. 组织低温制备在x射线显微分析中的临床应用。
Pub Date : 1991-01-01
G M Roomans

A number of diseases is associated with changes in ion and/or water distribution at the tissue or cell level, and X-ray microanalysis can be used to investigate the relationship between the disease process and the changes in elemental distribution. For analysis of diffusible elements by X-ray microanalysis, the tissue has to be prepared by cryotechniques. To carry out studies of this kind in a clinical environment poses a number of problems. Some of these problems occur already before the tissue is frozen, others are caused by the practical and ethical limitations that are imposed on the freezing method itself when human tissue is to be used. The use of cryostat sections for analysis at the cellular level, and of in vitro systems and cell cultures in which sampling and cryopreparation can be separated in time and place can be useful alternatives.

许多疾病与组织或细胞水平上离子和/或水分布的变化有关,x射线微量分析可用于研究疾病过程与元素分布变化之间的关系。为了用x射线微量分析分析可扩散元素,组织必须用冷冻技术制备。在临床环境中进行这类研究存在许多问题。其中一些问题在冷冻组织之前就已经出现了,另一些问题则是在使用人体组织时,由于冷冻方法本身的实际和伦理限制而引起的。在细胞水平上使用低温切片进行分析,在体外系统和细胞培养中,采样和低温处理可以在时间和地点上分开,这是有用的替代方法。
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引用次数: 0
High voltage electron microscopy and low voltage scanning electron microscopy of human neoplastic cell culture. 人肿瘤细胞培养的高压电镜和低压扫描电镜。
Pub Date : 1991-01-01
M Malecki

Improved procedures were developed to correlate cell culture data with the images provided by advanced ultrastructural technologies. These procedures were compatible with the two main types of cellular behavior: adherent, spreading (melanomas, rhabdomyosarcomas) and non-adherent in suspension (leukemias). The ultrastructure and function of spreading neoplastic cells primarily depend on surface properties of the attaching substrates. Therefore, the films used for cultured cell whole-mount ultrastructural analysis must have adherence features identical to those of standard cell culture vessels. Improved procedures were developed to produce the polystyrene films of required qualities. These films allowed processing of cells for electron microscopy including chemical fixation, cryo-immobilization, and immunolabelling. Furthermore, these polystyrene films permitted observations of the same cell in the high voltage electron microscope to reveal the internal organization and in the low voltage scanning electron microscope to reveal the surface topography. Neoplastic cells in suspension may dramatically change their ultrastructure as a result of interactions with substrates or other cells. Therefore, immobilization of cellular processes must occur rapidly while cells remain in suspension. These processes were cryo-immobilized by high pressure freezing through the use of the newly designed specimen carrier. Procedures allowing high yield attachment of cryo-fixed neoplastic cells to amino-propyl-derived glass carriers enabled observations of cell surface topography. Furthermore, freeze-substitution and drying of freeze-fractured cells revealed their three-dimensional internal organization in the low voltage scanning electron microscope.

开发了改进的程序,将细胞培养数据与先进的超微结构技术提供的图像相关联。这些方法与两种主要类型的细胞行为相一致:粘附性、扩散性(黑素瘤、横纹肌肉瘤)和非粘附性悬浮(白血病)。扩散肿瘤细胞的超微结构和功能主要取决于附着底物的表面特性。因此,用于培养细胞全贴壁超微结构分析的膜必须具有与标准细胞培养容器相同的粘附特性。开发了改进的工艺,以生产所需质量的聚苯乙烯薄膜。这些薄膜允许对细胞进行电子显微镜处理,包括化学固定、冷冻固定和免疫标记。此外,这些聚苯乙烯薄膜允许在高压电子显微镜下观察同一细胞的内部组织,在低压扫描电子显微镜下观察表面形貌。悬浮中的肿瘤细胞由于与底物或其他细胞的相互作用,其超微结构可能发生显著变化。因此,细胞过程的固定化必须在细胞保持悬浮状态时迅速发生。这些过程通过使用新设计的标本载体通过高压冷冻固定。将冷冻固定的肿瘤细胞高产量地附着在氨基丙基衍生的玻璃载体上,可以观察细胞表面形貌。低温扫描电镜观察了冻裂细胞的冷冻取代和干燥过程,揭示了细胞的三维内部组织。
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引用次数: 0
Diffusion of water in biological tissues. 水在生物组织中的扩散
Pub Date : 1991-01-01
H E Rorschach, C Lin, C F Hazlewood

A method is presented for obtaining simple approximate solutions for the problem of self-diffusion in an ordered array of obstacles. Our results are compared with some previous exact and approximate solutions, and we find that our method agrees well with the exact results over a large range of the volume fraction of the obstructions. It is shown that there is an important distinction between measurements of the diffusion coefficient by the capillary flow method and the spin-echo method. The modifications for the spin-echo case are given and applied to recent measurements on the anisotropy of the self-diffusion of water in striated muscle and to measurements on cysts of the brine shrimp. The analysis shows that very large volume fractions of obstructive barriers are required in order to account for the reduction in the diffusion coefficient in biological systems. Thus this model analysis leads to the supposition that a substantial fraction (20-40%) of the cell water is hydration water, or that the diffusion coefficient of the cytoplasmic water is reduced substantially from the free water value. In either case, the conclusion that a substantial fraction of cell water has diffusive properties that are altered by the macromolecules of the cytoplasm seems inescapable. In the case of NMR methodology, the measuring times are such that the values for diffusion are often influenced by the presence of macromolecular structures (obstructions) within the cells. This suggests that obstructions make a significant contribution to the value of the NMR diffusion coefficient and that NMR may have practical value for the evaluation of obstruction effects.

给出了一种求有序障碍物中自扩散问题的简单近似解的方法。我们的结果与以前的一些精确解和近似解进行了比较,我们发现我们的方法在很大范围内与障碍物体积分数的精确结果吻合得很好。结果表明,毛细管流动法和自旋回波法测量扩散系数有重要的区别。给出了自旋回波情况的修正,并应用于最近对横纹肌中水自扩散各向异性的测量和对盐水虾囊的测量。分析表明,为了解释生物系统中扩散系数的降低,需要非常大的体积分数的阻碍屏障。因此,这个模型分析导致假设细胞水的很大一部分(20-40%)是水化水,或者细胞质水的扩散系数比自由水的值大大降低。无论哪种情况,都不可避免地得出这样的结论:大部分细胞水具有被细胞质大分子改变的扩散特性。在核磁共振方法的情况下,测量时间使得扩散值经常受到细胞内大分子结构(障碍物)存在的影响。这表明障碍物对核磁共振扩散系数的取值有重要的贡献,核磁共振在评价障碍物效应方面可能具有实用价值。
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引用次数: 0
Aldehyde fixation causes membrane vesiculation during platelet exocytosis: a freeze-substitution study. 乙醛固定引起血小板胞吸过程中的膜囊泡:一项冷冻替代研究。
Pub Date : 1991-01-01
E Morgenstern

Despite a plethora of reports on the ultrastructure of secretory granule release by exocytosis, the release of coagulant activity from stimulated platelets is still being attributed to membrane vesiculation. Membrane vesiculation and the formation of myelin figures have been shown to be artifacts of glutaraldehyde GA fixation. Cells fixed by direct osmium or rapid freezing are free of such structures. Yet there is still doubt that rapid freezing interferes with vesiculation process. This study has addressed this issue by examining: (1) whether freezing and freeze-substitution affects membrane vesiculation, (2) whether paraformaldehyde-fixation also induces the phenomenon, and (3) whether the aldehyde concentration is of influence. Aldehyde fixation was carried out prior to impact freezing and freeze-substitution. In thrombin-stimulated platelets, membrane vesiculation and myelin figures were found. Glutaraldehyde induced multivesicular structures, paraformaldehyde or low aldehyde concentrations only blebs on the platelet surface. The membrane vesicles were in continuity with the cytoplasmic matrix. Unstimulated platelets did not show vesiculation or myelin figures. Control samples, without aldehyde fixation, showed instead of membrane vesiculation, granule fusion with the plasmalemma, or, instead of myelin figures, compound granules. This confirms that membrane vesiculation and the formation of myelin figures are artifacts induced by the failure of aldehydes to arrest lipid mobility within membranes undergoing rapid changes in structure. Although the presence of membrane vesiculation and myelin figures in platelets indicates that exocytotic processes were occurring at the moment of aldehyde fixation, the finding of membrane vesiculation in aldehyde-fixed platelets does not indicate a separate type of exocytosis.

尽管有大量关于胞吐作用释放分泌颗粒的超微结构的报道,但受刺激的血小板释放凝血活性仍然归因于膜囊泡。膜囊泡和髓鞘图形的形成已被证明是戊二醛GA固定的产物。通过直接锇或快速冷冻固定的细胞没有这种结构。然而,快速冷冻是否会干扰囊化过程仍存在疑问。本研究通过检验:(1)冷冻和冷冻取代是否会影响膜囊泡,(2)多聚甲醛固定是否也会引起这种现象,以及(3)醛浓度是否有影响,来解决这一问题。在冲击冷冻和冷冻替代之前进行醛固定。在凝血酶刺激的血小板中,发现膜囊泡和髓鞘图。戊二醛诱导多泡结构,多聚甲醛或低醛浓度仅在血小板表面起泡。膜囊泡与细胞质基质连续。未受刺激的血小板未出现囊泡或髓鞘图。不加醛固定的对照样品显示,颗粒与质膜融合,而不是膜囊泡,或复合颗粒代替髓磷脂图。这证实了膜囊泡和髓鞘图形的形成是由醛类在膜内经历快速结构变化时阻止脂质流动性失败引起的人工产物。尽管血小板中膜囊泡和髓磷脂的出现表明在醛固定的时刻发生了胞吐过程,但在醛固定的血小板中发现膜囊泡并不表明是一种单独的胞吐类型。
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引用次数: 0
Adsorption staining of freeze-substituted and low temperature embedded frog skeletal muscle with cesium: a new method for the investigation of protein-ion interactions. 冻代低温包埋蛙骨骼肌的铯吸附染色:一种研究蛋白质相互作用的新方法。
Pub Date : 1991-01-01
L Edelmann

A new adsorption staining method for transmission electron microscopy is described by means of which cellular adsorption sites of alkali-metal ions can be visualized in freeze-substituted and low temperature embedded biological material. The main features of this staining method are: 1) the use of Cs(+)-ions which are known to accumulate in living cells like K(+)-ions and 2) the removal of the staining solution from thin sections of the embedded material by centrifugal force. It is shown that sections of freeze-substituted and Lowicryl embedded frog skeletal muscle which has not been treated with chemical fixatives can be stained with electron-dense Cs(+)-ions: protein sites of preferential ion adsorption are visualized. These sites are similar to those accumulating monovalent ions in living cells as had been shown previously with frozen-hydrated preparations. An observed pH-dependency of the adsorption staining is consistent with the view that the ion adsorption sites are beta- and gamma-carboxyl groups of cellular proteins. The results obtained so far indicate that the new method can be used to investigate weak interactions between cellular proteins and different ions by electron microscopic methods.

描述了一种新的透射电镜吸附染色方法,该方法可以显示冷冻取代和低温包埋生物材料中碱金属离子的细胞吸附位点。这种染色方法的主要特点是:1)使用Cs(+)离子,已知Cs(+)离子会像K(+)离子一样在活细胞中积累;2)通过离心力将染色溶液从包埋材料的薄片上去除。结果表明,冷冻取代和低氯基包埋的青蛙骨骼肌切片,未经化学固定剂处理,可以用电子密集的Cs(+)-离子染色:优先离子吸附的蛋白质位点可见。这些位点类似于在活细胞中积累单价离子的位点,正如先前在冷冻水合制剂中所显示的那样。观察到的吸附染色的ph依赖性与离子吸附位点是细胞蛋白的β -和γ -羧基的观点一致。目前的研究结果表明,该方法可用于研究细胞蛋白与不同离子之间的弱相互作用。
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引用次数: 0
Preservation and immunogold localization of lipids by freeze-substitution and low temperature embedding. 冷冻取代和低温包埋法保存脂质及免疫金定位。
Pub Date : 1991-01-01
W Voorhout, I van Genderen, G van Meer, H Geuze

The success of post-embedding immunocytochemistry depends largely on the preparation methods. The requirements for structural preservation and immunocytochemistry are in some cases contradictory. This is especially the case in the study of lipid-rich structures and the localization of lipid components. Earlier work on freeze-substitution has shown that this method is very promising for the preservation of lipids and the immunocytochemical localization of lipids at the electron microscopical level. In this study we show that freeze-substitution in combination with low temperature embedding in Lowicryl HM20 has fulfilled this promise. Lamellar bodies in alveolar type II cells contain about 90% lipids and are very difficult to preserve in ultrathin cryosections. Lowicryl sections of freeze-substituted lung tissue shows excellent preservation of lamellar bodies in combination with immunogold localization of a hydrophobic surfactant protein. With an antibody against the Forssman glycolipid we demonstrate a highly reproducible intracellular localization of this glycolipid with high specificity and resolution. This method results in the retention of lipids and glycolipids and allows postembedding immunogold labeling.

包埋后免疫细胞化学的成功在很大程度上取决于制备方法。结构保存和免疫细胞化学的要求在某些情况下是矛盾的。在研究富脂结构和脂质成分定位时尤其如此。早期关于冷冻取代的研究表明,这种方法在电子显微镜水平上对脂质的保存和脂质的免疫细胞化学定位非常有希望。在这项研究中,我们表明冷冻取代结合低温包埋在Lowicryl HM20中实现了这一希望。肺泡II型细胞的片层体含有约90%的脂质,很难在超薄冷冻中保存。冷冻替代肺组织的低丙基切片显示,结合疏水表面活性剂蛋白的免疫金定位,片层体得到了很好的保存。使用针对Forssman糖脂的抗体,我们证明了这种糖脂具有高特异性和高分辨率的高度可重复的细胞内定位。这种方法导致脂质和糖脂质的保留,并允许包埋后免疫金标记。
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引用次数: 0
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Scanning microscopy. Supplement
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