首页 > 最新文献

Amino Acids最新文献

英文 中文
Sodium pyruvate improves the plasma amino acid profile in rats with l-arginine-induced acute pancreatitis 丙酮酸钠改善L-精氨酸诱导的急性胰腺炎大鼠的血浆氨基酸谱。
IF 3.5 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-09-27 DOI: 10.1007/s00726-023-03324-y
Anastasiia M. Zub, Roman D. Ostapiv, Bohdan O. Manko, Volodymyr V. Manko

Plasma amino acid levels are altered upon many pathological conditions including acute pancreatitis. It is unclear whether amino acids can be used as specific biomarker of acute pancreatitis severity or recovery. Development of acute pancreatitis is associated with mitochondrial dysfunction and decreased cytosolic ATP level. Sodium pyruvate is considered as a potential treatment of pancreatitis due to its ability to sustain mitochondrial oxidative and ATP-productive capacity in vitro. This study investigated the effect of sodium pyruvate on pancreatic morphology and plasma amino acid levels in rats with acute pancreatitis. Acute pancreatitis in rats was induced by administration of l-arginine (5 g/kg) Experimental treatment group received sodium pyruvate (1 g/kg) for 4 days. On day 8 of the experiment, animals were killed, blood was collected and plasma amino acid concentration was determined with high-performance liquid chromatography. Histological examination showed large areas of fibrosis in the pancreas of animals treated with l-arginine irrespectively of sodium pyruvate administration. Sodium pyruvate improved the plasma amino acid levels. Rats with acute pancreatitis had significantly lower levels of most essential and non-essential amino acids and increased glutamate and aspartate in plasma. Administration of sodium pyruvate completely or partially restored the levels of methionine, phenylalanine, tryptophan, leucine, isoleucine, aspartate, asparagine and ornithine levels, while increasing glutamine and serine to levels significantly higher than control. Plasma lysine, alanine, arginine and taurine remained unaffected in all experimental groups. Sodium pyruvate may be considered for use as a maintenance therapy in acute pancreatitis.

血浆氨基酸水平在包括急性胰腺炎在内的许多病理条件下都会发生改变。目前尚不清楚氨基酸是否可以作为急性胰腺炎严重程度或恢复的特异性生物标志物。急性胰腺炎的发展与线粒体功能障碍和胞浆ATP水平下降有关。丙酮酸钠被认为是一种潜在的胰腺炎治疗方法,因为它能够在体外维持线粒体氧化和ATP生产能力。本研究探讨了丙酮酸钠对急性胰腺炎大鼠胰腺形态和血浆氨基酸水平的影响。大鼠急性胰腺炎由L-精氨酸(5g/kg)诱导。实验治疗组接受丙酮酸钠(1g/kg)治疗4天。在实验的第8天,处死动物,采集血液,并用高效液相色谱法测定血浆氨基酸浓度。组织学检查显示,无论丙酮酸钠给药与否,用L-精氨酸治疗的动物胰腺都有大面积纤维化。丙酮酸钠改善了血浆氨基酸水平。急性胰腺炎大鼠血浆中大多数必需和非必需氨基酸水平显著降低,谷氨酸和天冬氨酸含量增加。丙酮酸钠的给药完全或部分恢复了蛋氨酸、苯丙氨酸、色氨酸、亮氨酸、异亮氨酸、天冬氨酸、天冬酰胺和鸟氨酸的水平,同时将谷氨酰胺和丝氨酸增加到显著高于对照的水平。所有实验组的血浆赖氨酸、丙氨酸、精氨酸和牛磺酸均未受影响。丙酮酸钠可作为急性胰腺炎的维持治疗方法。
{"title":"Sodium pyruvate improves the plasma amino acid profile in rats with l-arginine-induced acute pancreatitis","authors":"Anastasiia M. Zub,&nbsp;Roman D. Ostapiv,&nbsp;Bohdan O. Manko,&nbsp;Volodymyr V. Manko","doi":"10.1007/s00726-023-03324-y","DOIUrl":"10.1007/s00726-023-03324-y","url":null,"abstract":"<div><p>Plasma amino acid levels are altered upon many pathological conditions including acute pancreatitis. It is unclear whether amino acids can be used as specific biomarker of acute pancreatitis severity or recovery. Development of acute pancreatitis is associated with mitochondrial dysfunction and decreased cytosolic ATP level. Sodium pyruvate is considered as a potential treatment of pancreatitis due to its ability to sustain mitochondrial oxidative and ATP-productive capacity in vitro. This study investigated the effect of sodium pyruvate on pancreatic morphology and plasma amino acid levels in rats with acute pancreatitis. Acute pancreatitis in rats was induced by administration of <span>l</span>-arginine (5 g/kg) Experimental treatment group received sodium pyruvate (1 g/kg) for 4 days. On day 8 of the experiment, animals were killed, blood was collected and plasma amino acid concentration was determined with high-performance liquid chromatography. Histological examination showed large areas of fibrosis in the pancreas of animals treated with <span>l</span>-arginine irrespectively of sodium pyruvate administration. Sodium pyruvate improved the plasma amino acid levels. Rats with acute pancreatitis had significantly lower levels of most essential and non-essential amino acids and increased glutamate and aspartate in plasma. Administration of sodium pyruvate completely or partially restored the levels of methionine, phenylalanine, tryptophan, leucine, isoleucine, aspartate, asparagine and ornithine levels, while increasing glutamine and serine to levels significantly higher than control. Plasma lysine, alanine, arginine and taurine remained unaffected in all experimental groups. Sodium pyruvate may be considered for use as a maintenance therapy in acute pancreatitis.</p></div>","PeriodicalId":7810,"journal":{"name":"Amino Acids","volume":"55 10","pages":"1447 - 1454"},"PeriodicalIF":3.5,"publicationDate":"2023-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41098372","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular binding mechanism and novel antidiabetic and anti-hypertensive bioactive peptides from fermented camel milk with anti-inflammatory activity in raw macrophages cell lines 发酵骆驼乳中具有抗炎活性的新型抗糖尿病和抗高血压生物活性肽在生巨噬细胞细胞系中的分子结合机制。
IF 3.5 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-09-25 DOI: 10.1007/s00726-023-03335-9
Pratik Shukla, Amar Sakure, Bethsheba Basaiawmoit, Ruchita Khakhariya, Ruchika Maurya, Mahendra Bishnoi, Kanthi Kiran Kondepudi, Zhenbin Liu, Srichandan Padhi, Amit Kumar Rai, Subrota Hati

The investigation was to determine the effect of camel milk fermented with Limosilactobacillus fermentum KGL4 (MTCC 25515) on ACE-inhibiting, anti-inflammatory, and diabetes-preventing properties and also to release the novel peptides with antidiabetic and anti-hypertensive attributes with molecular interaction studies. Growth conditions were optimised on the basis of total peptide production by inoculating the culture in camel milk at different rates (1.5, 2.0, and 2.5%) along with different incubation periods (12, 24, 36, and 48 h). However, after 48 h of fermentation with a 2.5% rate of inoculum, the highest proteolytic activity was obtained. Reverse phase high-pressure liquid chromatography (RP-HPLC) was used to calculate the % Rpa from permeates of 3 kDa and 10 kDa fractions. Molecular weight distributions of fermented and unfermented camel milk protein fractions were compared using SDS-PAGE. Spots obtained from 2D gel electrophoresis were separated on the basis of pH and molecular weight. Spots obtained from 2D gel were digested with trypsin, and the digested samples were subjected to RP-LC/MS for the generation of peptide sequences. The inhibition of tumour necrosis factor alpha, interleukin-6, and interleukin-1 during fermentation was studied using RAW 264.7 macrophages. In the study, fermented camel milk with KGL4 (CMKGL4) inhibited LPS-induced nitric oxide (NO) production and pro-inflammatory cytokine production (TNF-α, IL-6, and IL-1β) by the murine macrophages. The results showed that the peptide structures (YLEELHRLNK and YLQELYPHSSLKVRPILK) exhibited considerable binding affinity against hPAM and hMGA during molecular interaction studies.

本研究旨在测定发酵乳杆菌KGL4发酵骆驼乳(MTCC 25515)对ACE抑制、抗炎和糖尿病预防特性的影响,并通过分子相互作用研究释放具有抗糖尿病和抗高血压特性的新型肽。通过在骆驼奶中以不同的速率(1.5%、2.0%和2.5%)以及不同的孵育期(12、24、36和48小时)接种培养物,在总肽产生的基础上优化生长条件。然而,在接种率为2.5%的发酵48小时后,获得了最高的蛋白水解活性。使用反相高压液相色谱法(RP-HPLC)计算3kDa和10kDa级分的渗透物的%Rpa。用SDS-PAGE比较了发酵和未发酵骆驼乳蛋白质组分的分子量分布。基于pH和分子量分离从2D凝胶电泳获得的斑点。用胰蛋白酶消化从2D凝胶获得的斑点,并对消化的样品进行RP-LC/MS以产生肽序列。使用RAW 264.7巨噬细胞研究了发酵过程中对肿瘤坏死因子α、白细胞介素-6和白细胞介蛋白-1的抑制作用。在本研究中,含有KGL4的发酵骆驼乳(CMKGL4)抑制LPS诱导的小鼠巨噬细胞产生一氧化氮(NO)和促炎细胞因子(TNF-α、IL-6和IL-1β)。结果表明,在分子相互作用研究中,肽结构(YLEELHRLNK和YLYPHSSLKVRPILK)对hPAM和hMGA表现出相当大的结合亲和力。
{"title":"Molecular binding mechanism and novel antidiabetic and anti-hypertensive bioactive peptides from fermented camel milk with anti-inflammatory activity in raw macrophages cell lines","authors":"Pratik Shukla,&nbsp;Amar Sakure,&nbsp;Bethsheba Basaiawmoit,&nbsp;Ruchita Khakhariya,&nbsp;Ruchika Maurya,&nbsp;Mahendra Bishnoi,&nbsp;Kanthi Kiran Kondepudi,&nbsp;Zhenbin Liu,&nbsp;Srichandan Padhi,&nbsp;Amit Kumar Rai,&nbsp;Subrota Hati","doi":"10.1007/s00726-023-03335-9","DOIUrl":"10.1007/s00726-023-03335-9","url":null,"abstract":"<div><p>The investigation was to determine the effect of camel milk fermented with <i>Limosilactobacillus fermentum</i> KGL4 (MTCC 25515) on ACE-inhibiting, anti-inflammatory, and diabetes-preventing properties and also to release the novel peptides with antidiabetic and anti-hypertensive attributes with molecular interaction studies. Growth conditions were optimised on the basis of total peptide production by inoculating the culture in camel milk at different rates (1.5, 2.0, and 2.5%) along with different incubation periods (12, 24, 36, and 48 h). However, after 48 h of fermentation with a 2.5% rate of inoculum, the highest proteolytic activity was obtained. Reverse phase high-pressure liquid chromatography (RP-HPLC) was used to calculate the % Rpa from permeates of 3 kDa and 10 kDa fractions. Molecular weight distributions of fermented and unfermented camel milk protein fractions were compared using SDS-PAGE. Spots obtained from 2D gel electrophoresis were separated on the basis of pH and molecular weight. Spots obtained from 2D gel were digested with trypsin, and the digested samples were subjected to RP-LC/MS for the generation of peptide sequences. The inhibition of tumour necrosis factor alpha, interleukin-6, and interleukin-1 during fermentation was studied using RAW 264.7 macrophages. In the study, fermented camel milk with KGL4 (CMKGL4) inhibited LPS-induced nitric oxide (NO) production and pro-inflammatory cytokine production (TNF-α, IL-6, and IL-1β) by the murine macrophages. The results showed that the peptide structures (YLEELHRLNK and YLQELYPHSSLKVRPILK) exhibited considerable binding affinity against hPAM and hMGA during molecular interaction studies.</p></div>","PeriodicalId":7810,"journal":{"name":"Amino Acids","volume":"55 11","pages":"1621 - 1640"},"PeriodicalIF":3.5,"publicationDate":"2023-09-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41095246","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Branched-chain amino acid supplementation does not enhance lean tissue accretion in low birth weight neonatal pigs, despite lower Sestrin2 expression in skeletal muscle 尽管Sestrin2在骨骼肌中的表达较低,但补充支链氨基酸并不能增强低出生体重新生猪的瘦组织增生。
IF 3.5 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-09-24 DOI: 10.1007/s00726-023-03319-9
Joseph A. Yonke, Kacie A. Seymour, Samer W. El-Kadi

Postnatal muscle growth is impaired in low birth weight (L) neonatal pigs. Leucine supplementation has been established as a dietary intervention to enhance muscle growth in growing animals. The aim of this study was to investigate the efficacy of supplementing L neonatal pig formulas with branched-chain amino acids (B) to enhance the rate of protein accretion. Twenty-four 3-day old pigs were divided into two groups low (L) and normal birth weight (N) based on weight at birth. Pigs were assigned to a control (C) or 1% branched-chain amino acids (B) formulas, and fed at 250 mL·kg body weight −1·d−1 for 28 d. Body weight of pigs in the L group was less than those in the N group (P < 0.01). However, fractional body weight was greater for L pigs compared with their N siblings from day 24 to 28 of feeding regardless of formula (P < 0.01). In addition, feed efficiency (P < 0.0001) and efficiently of protein accretion (P < 0.0001) were greater for L than N pigs regardless of supplementation. Pigs fed the B formula had greater plasma leucine, isoleucine, and valine concentrations compared with those fed the C formula (P < 0.05). Longissimus dorsi Sestrin2 protein expression was less for pigs in the L group compared with those in the N group (P < 0.01), but did not result in a corresponding increase in translation initiation signaling. Longissimus dorsi mRNA expression of BCAT2 was less for LB pigs compared with those in the LC group, and was intermediate for NC and NB pigs (P < 0.05). Hepatic mRNA expression of BCKDHA was greater for pigs in the L compared with those in the N groups (P < 0.05). However, plasma branched-chain keto-acid concentration was reduced for C compared with those in the B group (P < 0.05). These data suggest that branched-chain amino acid supplementation does not improve lean tissue accretion of low and normal birth weight pigs, despite a reduction in Sestrin2 expression in skeletal muscle of low birth weight pigs. The modest improvement in fractional growth rate of low birth weight pigs compared with their normal birth weight siblings was likely due to a more efficient dietary protein utilization.

低出生体重(L)新生猪的产后肌肉生长受损。补充亮氨酸已被确定为一种增强生长中动物肌肉生长的饮食干预措施。本研究的目的是研究在L新生猪配方奶粉中添加支链氨基酸(B)以提高蛋白质积累率的效果。24头3日龄猪按出生体重分为低出生体重(L)组和正常出生体重(N)组。猪被分配到对照(C)或1%支链氨基酸(B)配方,并以250mL·kg体重-1·d-1喂养28天。L组的猪体重低于N组(P
{"title":"Branched-chain amino acid supplementation does not enhance lean tissue accretion in low birth weight neonatal pigs, despite lower Sestrin2 expression in skeletal muscle","authors":"Joseph A. Yonke,&nbsp;Kacie A. Seymour,&nbsp;Samer W. El-Kadi","doi":"10.1007/s00726-023-03319-9","DOIUrl":"10.1007/s00726-023-03319-9","url":null,"abstract":"<div><p>Postnatal muscle growth is impaired in low birth weight (L) neonatal pigs. Leucine supplementation has been established as a dietary intervention to enhance muscle growth in growing animals. The aim of this study was to investigate the efficacy of supplementing L neonatal pig formulas with branched-chain amino acids (B) to enhance the rate of protein accretion. Twenty-four 3-day old pigs were divided into two groups low (L) and normal birth weight (N) based on weight at birth. Pigs were assigned to a control (C) or 1% branched-chain amino acids (B) formulas, and fed at 250 mL·kg body weight <sup>−1</sup>·d<sup>−1</sup> for 28 d. Body weight of pigs in the L group was less than those in the N group (<i>P</i> &lt; 0.01). However, fractional body weight was greater for L pigs compared with their N siblings from day 24 to 28 of feeding regardless of formula (<i>P</i> &lt; 0.01). In addition, feed efficiency (<i>P</i> &lt; 0.0001) and efficiently of protein accretion (<i>P</i> &lt; 0.0001) were greater for L than N pigs regardless of supplementation. Pigs fed the B formula had greater plasma leucine, isoleucine, and valine concentrations compared with those fed the C formula (<i>P</i> &lt; 0.05). Longissimus dorsi Sestrin2 protein expression was less for pigs in the L group compared with those in the N group (<i>P</i> &lt; 0.01), but did not result in a corresponding increase in translation initiation signaling. Longissimus dorsi mRNA expression of <i>BCAT2</i> was less for LB pigs compared with those in the LC group, and was intermediate for NC and NB pigs (<i>P</i> &lt; 0.05). Hepatic mRNA expression of <i>BCKDHA</i> was greater for pigs in the L compared with those in the N groups (<i>P</i> &lt; 0.05). However, plasma branched-chain keto-acid concentration was reduced for C compared with those in the B group (<i>P</i> &lt; 0.05). These data suggest that branched-chain amino acid supplementation does not improve lean tissue accretion of low and normal birth weight pigs, despite a reduction in Sestrin2 expression in skeletal muscle of low birth weight pigs. The modest improvement in fractional growth rate of low birth weight pigs compared with their normal birth weight siblings was likely due to a more efficient dietary protein utilization.</p></div>","PeriodicalId":7810,"journal":{"name":"Amino Acids","volume":"55 10","pages":"1389 - 1404"},"PeriodicalIF":3.5,"publicationDate":"2023-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41101386","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The effect of insulin resistance on extracellular BCAA accumulation and SLC25A44 expression in a myotube model of skeletal muscle insulin resistance 胰岛素抵抗对骨骼肌胰岛素抵抗肌管模型中细胞外BCAA积累和SLC25A44表达的影响。
IF 3.5 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-09-23 DOI: 10.1007/s00726-023-03336-8
Caroline N. Rivera, Rachel M. Watne, Andrew J. Wommack, Roger A. Vaughan

Insulin resistance is often accompanied by elevated circulating branched-chain amino acids (BCAA). We investigated the effects of insulin resistance on the mitochondrial BCAA transporter, SLC25A44, using a myotube model of insulin resistance. Insulin sensitivity and SLC25A44 expression were assessed via Western blot. Liquid chromatography-mass spectrometry was used to evaluate extracellular BCAA media content. Insulin resistance reduced pAkt activation following insulin stimulation but did not alter SLC25A44 expression. Under select conditions, insulin resistance led to the accumulation of extracellular BCAA.

胰岛素抵抗通常伴有循环支链氨基酸(BCAA)升高。我们使用胰岛素抵抗的肌管模型研究了胰岛素抵抗对线粒体BCAA转运蛋白SLC25A44的影响。通过蛋白质印迹评估胰岛素敏感性和SLC25A44表达。液相色谱-质谱法用于评价细胞外BCAA培养基的含量。胰岛素抵抗降低了胰岛素刺激后pAkt的激活,但没有改变SLC25A44的表达。在选定的条件下,胰岛素抵抗导致细胞外BCAA的积累。
{"title":"The effect of insulin resistance on extracellular BCAA accumulation and SLC25A44 expression in a myotube model of skeletal muscle insulin resistance","authors":"Caroline N. Rivera,&nbsp;Rachel M. Watne,&nbsp;Andrew J. Wommack,&nbsp;Roger A. Vaughan","doi":"10.1007/s00726-023-03336-8","DOIUrl":"10.1007/s00726-023-03336-8","url":null,"abstract":"<div><p>Insulin resistance is often accompanied by elevated circulating branched-chain amino acids (BCAA). We investigated the effects of insulin resistance on the mitochondrial BCAA transporter, SLC25A44, using a myotube model of insulin resistance. Insulin sensitivity and SLC25A44 expression were assessed via Western blot. Liquid chromatography-mass spectrometry was used to evaluate extracellular BCAA media content. Insulin resistance reduced pAkt activation following insulin stimulation but did not alter SLC25A44 expression. Under select conditions, insulin resistance led to the accumulation of extracellular BCAA.</p></div>","PeriodicalId":7810,"journal":{"name":"Amino Acids","volume":"55 11","pages":"1701 - 1705"},"PeriodicalIF":3.5,"publicationDate":"2023-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41102999","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metabolomic profiling of amino acids study reveals a distinct diagnostic model for diabetic kidney disease 氨基酸代谢组学分析研究揭示了糖尿病肾病的独特诊断模型。
IF 3.5 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-09-22 DOI: 10.1007/s00726-023-03330-0
Jiao Wang, Chunyu Zhou, Qing Zhang, Zhangsuo Liu

Diabetic kidney disease (DKD), a highly prevalent complication of diabetes mellitus, is a major cause of mortality in patients. However, identifying circulatory markers to diagnose DKD requires a thorough understanding of the metabolic mechanisms of DKD. In this study, we performed ultra-performance liquid chromatography tandem mass spectrometry (UPLC-MS/MS) to reveal altered metabolic profiles of amino acids (AAs) in patients with DKD. We found decreased plasma levels of histidine and valine, increased urine levels of proline, decreased urine levels of histidine and valine, and increased saliva levels of arginine in patients with DKD compared with the levels in patients with type 2 diabetes mellitus (T2DM) and in healthy controls. Our analyses of the key metabolites and metabolic enzymes involved in histidine and valine metabolism indicated that the AAs level alterations may be due to enhanced carnosine hydrolysis, decreased degradation of homocarnosine and anserine, enhanced histidine methylation, and systemic enhancement of valine metabolism in patients with DKD. Notably, we generated a distinct diagnostic model with an AUC of 0.957 and an accuracy up to 92.2% on the basis of the AA profiles in plasma, urine and saliva differing in patients with DKD using logistic regression and receiver operating characteristic analyses. In conclusion, our results suggest that altered AA metabolic profiles are associated with the progression of DKD. Our DKD diagnostic model on the basis of AA levels in plasma, urine, and saliva may provide a theoretical basis for innovative strategies to diagnose DKD that may replace cumbersome kidney biopsies.

糖尿病肾病(DKD)是糖尿病的一种高度流行的并发症,是导致患者死亡的主要原因。然而,识别循环标志物来诊断DKD需要彻底了解DKD的代谢机制。在这项研究中,我们进行了超高效液相色谱-串联质谱法(UPLC-MS/MS),以揭示DKD患者氨基酸代谢谱的变化。我们发现,与2型糖尿病(T2DM)患者和健康对照组相比,DKD患者的血浆组氨酸和缬氨酸水平降低,尿液脯氨酸水平升高,尿液组氨酸和valine水平降低,唾液精氨酸水平升高。我们对参与组氨酸和缬氨酸代谢的关键代谢产物和代谢酶的分析表明,在DKD患者中,AAs水平的改变可能是由于肌肽水解增强、高肌肽和丝氨酸降解减少、组氨酸甲基化增强以及缬氨酸代谢系统增强所致。值得注意的是,我们使用逻辑回归和受试者操作特征分析,根据DKD患者血浆、尿液和唾液中不同的AA图谱,生成了一个AUC为0.957、准确率高达92.2%的独特诊断模型。总之,我们的研究结果表明,AA代谢谱的改变与DKD的进展有关。我们基于血浆、尿液和唾液中AA水平的DKD诊断模型可能为诊断DKD的创新策略提供理论基础,该策略可能会取代繁琐的肾活检。
{"title":"Metabolomic profiling of amino acids study reveals a distinct diagnostic model for diabetic kidney disease","authors":"Jiao Wang,&nbsp;Chunyu Zhou,&nbsp;Qing Zhang,&nbsp;Zhangsuo Liu","doi":"10.1007/s00726-023-03330-0","DOIUrl":"10.1007/s00726-023-03330-0","url":null,"abstract":"<div><p>Diabetic kidney disease (DKD), a highly prevalent complication of diabetes mellitus, is a major cause of mortality in patients. However, identifying circulatory markers to diagnose DKD requires a thorough understanding of the metabolic mechanisms of DKD. In this study, we performed ultra-performance liquid chromatography tandem mass spectrometry (UPLC-MS/MS) to reveal altered metabolic profiles of amino acids (AAs) in patients with DKD. We found decreased plasma levels of histidine and valine, increased urine levels of proline, decreased urine levels of histidine and valine, and increased saliva levels of arginine in patients with DKD compared with the levels in patients with type 2 diabetes mellitus (T2DM) and in healthy controls. Our analyses of the key metabolites and metabolic enzymes involved in histidine and valine metabolism indicated that the AAs level alterations may be due to enhanced carnosine hydrolysis, decreased degradation of homocarnosine and anserine, enhanced histidine methylation, and systemic enhancement of valine metabolism in patients with DKD. Notably, we generated a distinct diagnostic model with an AUC of 0.957 and an accuracy up to 92.2% on the basis of the AA profiles in plasma, urine and saliva differing in patients with DKD using logistic regression and receiver operating characteristic analyses. In conclusion, our results suggest that altered AA metabolic profiles are associated with the progression of DKD. Our DKD diagnostic model on the basis of AA levels in plasma, urine, and saliva may provide a theoretical basis for innovative strategies to diagnose DKD that may replace cumbersome kidney biopsies.</p></div>","PeriodicalId":7810,"journal":{"name":"Amino Acids","volume":"55 11","pages":"1563 - 1572"},"PeriodicalIF":3.5,"publicationDate":"2023-09-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s00726-023-03330-0.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41098638","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Impact of chemical modifications on the antimicrobial and hemolytic activity of helical amphipathic peptide Lasioglossin LL-III 化学修饰对螺旋两亲肽Lasioglossin LL-III抗菌和溶血活性的影响。
IF 3.5 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-09-22 DOI: 10.1007/s00726-023-03326-w
Hai Bui Thi Phuong, Chi Le Uyen, Hoa Doan Ngan, Huy Luong Xuan

Insect venom is abundant in potential antimicrobial peptides (AMPs), which can serve as novel alternatives to conventional antibiotics. Among them, Lasioglossin III LL-III) is a promising candidate with a broad spectrum against many fungi strains and both types of bacteria, whereas almost non-toxic to red blood cells. Many chemical approaches have been recently applied to improve its pharmacological properties and provide useful information regarding structure–activity relationships. Hence, this review focused on highlighting the lesson learned from each modification and supporting the future design of potent, selective, and metabolically stable AMPs.

昆虫毒液中含有丰富的潜在抗菌肽,可作为传统抗生素的新替代品。其中,Lasioglossin III LL-III)是一种很有前途的候选者,对许多真菌菌株和两种类型的细菌都有广谱性,而对红细胞几乎无毒。最近已经应用了许多化学方法来改善其药理学性质,并提供关于结构-活性关系的有用信息。因此,这篇综述的重点是强调从每次修饰中吸取的教训,并支持未来设计强效、选择性和代谢稳定的AMP。
{"title":"Impact of chemical modifications on the antimicrobial and hemolytic activity of helical amphipathic peptide Lasioglossin LL-III","authors":"Hai Bui Thi Phuong,&nbsp;Chi Le Uyen,&nbsp;Hoa Doan Ngan,&nbsp;Huy Luong Xuan","doi":"10.1007/s00726-023-03326-w","DOIUrl":"10.1007/s00726-023-03326-w","url":null,"abstract":"<div><p>Insect venom is abundant in potential antimicrobial peptides (AMPs), which can serve as novel alternatives to conventional antibiotics. Among them, <b>Lasioglossin III</b> <b>LL-III</b>) is a promising candidate with a broad spectrum against many fungi strains and both types of bacteria, whereas almost non-toxic to red blood cells. Many chemical approaches have been recently applied to improve its pharmacological properties and provide useful information regarding structure–activity relationships. Hence, this review focused on highlighting the lesson learned from each modification and supporting the future design of potent, selective, and metabolically stable AMPs.</p></div>","PeriodicalId":7810,"journal":{"name":"Amino Acids","volume":"55 11","pages":"1531 - 1544"},"PeriodicalIF":3.5,"publicationDate":"2023-09-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41092500","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Shuttle between arginine and lysine: influence on cancer immunonutrition 精氨酸和赖氨酸之间的穿梭:对癌症免疫营养的影响。
IF 3.5 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-09-20 DOI: 10.1007/s00726-023-03327-9
R. Sindhu, M. Supreeth, Shashanka K. Prasad, M. Thanmaya

Amino acids which are essential nutrients for all cell types’ survival are also recognised to serve as opportunistic/alternative fuels in cancers auxotrophic for specific amino acids. Accordingly, restriction of amino acids has been utilised as a therapeutic strategy in these cancers. Contrastingly, amino acid deficiencies in cancer are found to greatly impair immune functions, increasing mortality and morbidity rates. Dietary and supplemental amino acids in such conditions have revealed their importance as ‘immunonutrients’ by modulating cellular homeostasis processes and halting malignant progression. L-arginine specifically has attracted interest as an immunonutrient by acting as a nodal regulator of immune responses linked to carcinogenesis processes through its versatile signalling molecule, nitric oxide (NO). The quantum of NO generated directly influences the cytotoxic and cytostatic processes of cell cycle arrest, apoptosis, and senescence. However, L-lysine, a CAT transporter competitor for arginine effectively limits arginine input at high L-lysine concentrations by limiting arginine-mediated effects. The phenomenon of arginine–lysine antagonism can, therefore, be hypothesised to influence the immunonutritional effects exerted by arginine. The review highlights aspects of lysine’s interference with arginine-mediated NO generation and its consequences on immunonutritional and anti-cancer effects, and discusses possible alternatives to manage the condition. However, further research that considers monitoring lysine levels in arginine immunonutritional therapy is essential to conclude the hypothesis.

氨基酸是所有细胞类型生存的必需营养素,也被认为是特定氨基酸营养缺陷型癌症的机会/替代燃料。因此,限制氨基酸已被用作这些癌症的治疗策略。相反,癌症的氨基酸缺乏会严重损害免疫功能,增加死亡率和发病率。在这种情况下,膳食和补充氨基酸通过调节细胞稳态过程和阻止恶性进展,揭示了其作为“免疫营养素”的重要性。L-精氨酸作为一种免疫营养素,通过其多功能信号分子一氧化氮(NO)作为与致癌过程相关的免疫反应的节点调节因子,特别引起了人们的兴趣。NO产生的量直接影响细胞周期停滞、细胞凋亡和衰老的细胞毒性和细胞抑制过程。然而,精氨酸的CAT转运蛋白竞争对手L-赖氨酸通过限制精氨酸介导的作用,有效地限制了高L-赖氨酶浓度下的精氨酸输入。因此,可以假设精氨酸-赖氨酸拮抗现象会影响精氨酸发挥的免疫营养作用。该综述强调了赖氨酸对精氨酸介导的NO生成的干扰及其对免疫营养和抗癌效果的影响,并讨论了管理这种情况的可能替代方案。然而,考虑在精氨酸免疫营养治疗中监测赖氨酸水平的进一步研究对于得出这一假设至关重要。
{"title":"Shuttle between arginine and lysine: influence on cancer immunonutrition","authors":"R. Sindhu,&nbsp;M. Supreeth,&nbsp;Shashanka K. Prasad,&nbsp;M. Thanmaya","doi":"10.1007/s00726-023-03327-9","DOIUrl":"10.1007/s00726-023-03327-9","url":null,"abstract":"<div><p>Amino acids which are essential nutrients for all cell types’ survival are also recognised to serve as opportunistic/alternative fuels in cancers auxotrophic for specific amino acids. Accordingly, restriction of amino acids has been utilised as a therapeutic strategy in these cancers. Contrastingly, amino acid deficiencies in cancer are found to greatly impair immune functions, increasing mortality and morbidity rates. Dietary and supplemental amino acids in such conditions have revealed their importance as ‘immunonutrients’ by modulating cellular homeostasis processes and halting malignant progression. L-arginine specifically has attracted interest as an immunonutrient by acting as a nodal regulator of immune responses linked to carcinogenesis processes through its versatile signalling molecule, nitric oxide (NO). The quantum of NO generated directly influences the cytotoxic and cytostatic processes of cell cycle arrest, apoptosis, and senescence. However, L-lysine, a CAT transporter competitor for arginine effectively limits arginine input at high L-lysine concentrations by limiting arginine-mediated effects. The phenomenon of arginine–lysine antagonism can, therefore, be hypothesised to influence the immunonutritional effects exerted by arginine. The review highlights aspects of lysine’s interference with arginine-mediated NO generation and its consequences on immunonutritional and anti-cancer effects, and discusses possible alternatives to manage the condition. However, further research that considers monitoring lysine levels in arginine immunonutritional therapy is essential to conclude the hypothesis.</p></div>","PeriodicalId":7810,"journal":{"name":"Amino Acids","volume":"55 11","pages":"1461 - 1473"},"PeriodicalIF":3.5,"publicationDate":"2023-09-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41108126","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Untargeted metabolomics analysis of plasma metabolic characteristics in patients with acne and insulin resistance 痤疮和胰岛素抵抗患者血浆代谢特征的非靶向代谢组学分析。
IF 3.5 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-09-19 DOI: 10.1007/s00726-023-03320-2
Qingqing He, Huiling Shu, Yu Peng, Yang Xu, Li Liu, Jie Zhou, Juan Zhao, Xia Xiong, Changqiang Li

Acne vulgaris is a chronic inflammatory disease with high incidence, diverse clinical manifestations, poor clinical efficacy, and easy recurrence. Recent studies have found that the occurrence of acne is related to metabolic factors such as insulin resistance; however, the specific mechanism of action remains unclear. This study aimed to identify significantly different metabolites and related metabolic pathways in the serum of acne vulgaris patients with or without insulin resistance. LC–MS/MS was used to analyze serum samples from patients about acne with insulin resistance (n = 51) and acne without insulin resistance (n = 69) to identify significant metabolites and metabolic pathways. In this study, 18 significant differential metabolites were screened for the first time. In the positive-ion mode, the upregulated substances were creatine, sarcosine, D-proline, uracil, Phe–Phe, L-pipecolic acid, and DL-phenylalanine; the downregulated substances were tridecanoic acid (tridecylic acid), L-lysine, cyclohexylamine, sphingomyelin (d18:1/18:0), gamma-L-Glu-epsilon-L-Lys, and 1,2-dioleoyl-sn-glycero-3-phosphatidylcholine. In the negative-ion mode, the upregulated substance was cholesterol sulfate, and the downregulated substances were D(-)-beta-hydroxybutyric acid, myristic acid, D-galacturonic acid, and dihydrothymine. Cholesterol sulfate showed the most significant expression among all differential metabolites (VIP = 7.3411). Based on the KEGG database, necroptosis and ABC transporters were the most significantly enriched metabolic pathways in this experiment. The differential metabolites and pathways identified in this study may provide new possibilities for the clinical diagnosis and development of targeted drugs for acne patients with insulin resistance.

寻常痤疮是一种发病率高、临床表现多样、临床疗效差、易复发的慢性炎症性疾病。最近的研究发现,痤疮的发生与胰岛素抵抗等代谢因素有关;然而,具体的作用机制尚不清楚。本研究旨在确定患有或不患有胰岛素抵抗的寻常痤疮患者血清中显著不同的代谢产物和相关代谢途径。LC-MS/MS用于分析胰岛素抵抗痤疮患者的血清样品(n = 51)和没有胰岛素抵抗的痤疮(n = 69)来鉴定重要的代谢产物和代谢途径。本研究首次筛选出18种具有显著差异的代谢产物。在正离子模式中,上调的物质是肌酸、肌氨酸、D-脯氨酸、尿嘧啶、Phe-Phe、L-哌啶酸和DL-苯丙氨酸;下调物质为十三烷酸(十三烷酸)、L-赖氨酸、环己胺、鞘磷脂(d18:1/18:0)、γ-L-Glu-epsilon-L-Lys和1,2-二醇基-sn-甘油-3-磷脂酰胆碱。在负离子模式下,上调物质为硫酸胆固醇,下调物质为D(-)-β-羟基丁酸、肉豆蔻酸、D-半乳糖醛酸和二氢胸腺嘧啶。硫酸胆固醇在所有差异代谢产物中表现出最显著的表达(VIP = 7.3411)。根据KEGG数据库,坏死和ABC转运蛋白是本实验中最显著富集的代谢途径。本研究中确定的差异代谢产物和途径可能为胰岛素抵抗痤疮患者的临床诊断和靶向药物开发提供新的可能性。
{"title":"Untargeted metabolomics analysis of plasma metabolic characteristics in patients with acne and insulin resistance","authors":"Qingqing He,&nbsp;Huiling Shu,&nbsp;Yu Peng,&nbsp;Yang Xu,&nbsp;Li Liu,&nbsp;Jie Zhou,&nbsp;Juan Zhao,&nbsp;Xia Xiong,&nbsp;Changqiang Li","doi":"10.1007/s00726-023-03320-2","DOIUrl":"10.1007/s00726-023-03320-2","url":null,"abstract":"<div><p>Acne vulgaris is a chronic inflammatory disease with high incidence, diverse clinical manifestations, poor clinical efficacy, and easy recurrence. Recent studies have found that the occurrence of acne is related to metabolic factors such as insulin resistance; however, the specific mechanism of action remains unclear. This study aimed to identify significantly different metabolites and related metabolic pathways in the serum of acne vulgaris patients with or without insulin resistance. LC–MS/MS was used to analyze serum samples from patients about acne with insulin resistance (<i>n</i> = 51) and acne without insulin resistance (<i>n</i> = 69) to identify significant metabolites and metabolic pathways. In this study, 18 significant differential metabolites were screened for the first time. In the positive-ion mode, the upregulated substances were creatine, sarcosine, <span>D</span>-proline, uracil, Phe–Phe, <span>L</span>-pipecolic acid, and <span>DL</span>-phenylalanine; the downregulated substances were tridecanoic acid (tridecylic acid), <span>L</span>-lysine, cyclohexylamine, sphingomyelin (d18:1/18:0), gamma-<span>L</span>-Glu-epsilon-<span>L</span>-Lys, and 1,2-dioleoyl-sn-glycero-3-phosphatidylcholine. In the negative-ion mode, the upregulated substance was cholesterol sulfate, and the downregulated substances were <span>D</span>(-)-beta-hydroxybutyric acid, myristic acid, <span>D</span>-galacturonic acid, and dihydrothymine. Cholesterol sulfate showed the most significant expression among all differential metabolites (VIP = 7.3411). Based on the KEGG database, necroptosis and ABC transporters were the most significantly enriched metabolic pathways in this experiment. The differential metabolites and pathways identified in this study may provide new possibilities for the clinical diagnosis and development of targeted drugs for acne patients with insulin resistance.</p></div>","PeriodicalId":7810,"journal":{"name":"Amino Acids","volume":"55 10","pages":"1417 - 1428"},"PeriodicalIF":3.5,"publicationDate":"2023-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41097231","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Serum branched amino acids and the risk of all-cause mortality: a meta-analysis and systematic review 血清支链氨基酸与全因死亡率的风险:一项荟萃分析和系统综述。
IF 3.5 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-09-19 DOI: 10.1007/s00726-023-03329-7
Farshad Teymoori, Hamid Ahmadirad, Mitra Kazemi Jahromi, Ebrahim Mokhtari, Hossein Farhadnejad, Milad Mohammadzadeh, Mitra Babrpanjeh, Tahere Shahrokhtabar, Sanaz Jamshidi, Parvin Mirmiran

Recently, the serum levels of branched-chain amino acids (BCAAs) have been considered as an indicator to evaluate health status and predict chronic diseases risk. This systematic review and meta-analysis aimed to assess the relationship between Serum BCAAs and the risk of all-cause mortality. We carried out a comprehensive and systematic search in various important databases, including PubMed, Scopus, and Web of Science databases to find the relevant studies published up to October 2022 with no language, design, or time limitation. We extracted the reported hazard ratio (HR) with 95% confidence interval (CI) and odds ratio (OR) with 95%CI in cohorts and case–control studies, respectively, and computed the log HR or OR and its standard error. Then, we used the random-effects model with inverse variance weighting method for the present meta-analysis, to calculate the pooled effect size. Ten observational studies, including nine cohort studies and one case–control study, were included in the present meta-analysis. The number of participants ranges from 53 to 26,711, with an age range of 18–99 years. During 6 months to 24 years of follow-up, 3599 deaths were ascertained. The pooled results indicated that there was no significant association between serum BCAAs (RR: 1.17; 95% CI 0.85–1.60), isoleucine (RR: 1.41; 95%CI 0.92–2.17), leucine (RR: 1.13; 95% CI 0.94–1.36), and valine (RR: 1.02; 95%CI 0.86–1.22) and all-cause mortality. Also, there was significant heterogeneity between studies for serum BCAAs (I2 = 74.1% and P-heterogeneity = 0.021), isoleucine (I2 = 89.4% and P-heterogeneity < 0.001), leucine (I2 = 87.8% and P-heterogeneity < 0.001), and valine (I2 = 86.6% and P-heterogeneity < 0.001). Our results suggested that the serum BCAAs and its components, including isoleucine, leucine, and valine, were not associated with the risk of all-cause mortality.

最近,血清支链氨基酸(BCAAs)水平被认为是评估健康状况和预测慢性病风险的指标。本系统综述和荟萃分析旨在评估血清BCAAs与全因死亡率之间的关系。我们在各种重要数据库中进行了全面系统的搜索,包括PubMed、Scopus和Web of Science数据库,以查找截至2022年10月发表的相关研究,没有语言、设计或时间限制。我们分别在队列和病例对照研究中提取了报告的95%置信区间的危险比(HR)和95%置信区间(OR),并计算了log HR或OR及其标准误差。然后,我们在本荟萃分析中使用了具有逆方差加权方法的随机效应模型来计算合并效应大小。本荟萃分析包括10项观察性研究,包括9项队列研究和1项病例对照研究。参与者人数从53人到26711人不等,年龄在18-99岁之间。在6个月至24年的随访中,确定了3599例死亡病例。合并结果表明,血清BCAAs(RR:1.17;95%CI 0.85-1.60)、异亮氨酸(RR:1.41;95%CI 0.92-2.17)、亮氨酸(RR:10.13;95%CI0.94-1.36)和缬氨酸(RR:1.02;95%CI0.86-1.22)与全因死亡率之间没有显著关联。此外,血清BCAAs的研究之间存在显著的异质性(I2 = 74.1%和P-异质性 = 0.021)、异亮氨酸(I2 = 89.4%和P-异质性 2. = 87.8%和P异质性 2. = 86.6%和P-异质性
{"title":"Serum branched amino acids and the risk of all-cause mortality: a meta-analysis and systematic review","authors":"Farshad Teymoori,&nbsp;Hamid Ahmadirad,&nbsp;Mitra Kazemi Jahromi,&nbsp;Ebrahim Mokhtari,&nbsp;Hossein Farhadnejad,&nbsp;Milad Mohammadzadeh,&nbsp;Mitra Babrpanjeh,&nbsp;Tahere Shahrokhtabar,&nbsp;Sanaz Jamshidi,&nbsp;Parvin Mirmiran","doi":"10.1007/s00726-023-03329-7","DOIUrl":"10.1007/s00726-023-03329-7","url":null,"abstract":"<div><p>Recently, the serum levels of branched-chain amino acids (BCAAs) have been considered as an indicator to evaluate health status and predict chronic diseases risk. This systematic review and meta-analysis aimed to assess the relationship between Serum BCAAs and the risk of all-cause mortality. We carried out a comprehensive and systematic search in various important databases, including PubMed, Scopus, and Web of Science databases to find the relevant studies published up to October 2022 with no language, design, or time limitation. We extracted the reported hazard ratio (HR) with 95% confidence interval (CI) and odds ratio (OR) with 95%CI in cohorts and case–control studies, respectively, and computed the log HR or OR and its standard error. Then, we used the random-effects model with inverse variance weighting method for the present meta-analysis, to calculate the pooled effect size. Ten observational studies, including nine cohort studies and one case–control study, were included in the present meta-analysis. The number of participants ranges from 53 to 26,711, with an age range of 18–99 years. During 6 months to 24 years of follow-up, 3599 deaths were ascertained. The pooled results indicated that there was no significant association between serum BCAAs (RR: 1.17; 95% CI 0.85–1.60), isoleucine (RR: 1.41; 95%CI 0.92–2.17), leucine (RR: 1.13; 95% CI 0.94–1.36), and valine (RR: 1.02; 95%CI 0.86–1.22) and all-cause mortality. Also, there was significant heterogeneity between studies for serum BCAAs (<i>I</i><sup>2</sup> = 74.1% and P-heterogeneity = 0.021), isoleucine (<i>I</i><sup>2</sup> = 89.4% and P-heterogeneity &lt; 0.001), leucine (<i>I</i><sup>2</sup> = 87.8% and P-heterogeneity &lt; 0.001), and valine (<i>I</i><sup>2</sup> = 86.6% and P-heterogeneity &lt; 0.001). Our results suggested that the serum BCAAs and its components, including isoleucine, leucine, and valine, were not associated with the risk of all-cause mortality.</p></div>","PeriodicalId":7810,"journal":{"name":"Amino Acids","volume":"55 11","pages":"1475 - 1486"},"PeriodicalIF":3.5,"publicationDate":"2023-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41094579","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Apoptin NLS2 homodimerization strategy for improved antibacterial activity and bio-stability Apoptin NLS2同源二聚策略可提高抗菌活性和生物稳定性。
IF 3.5 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-09-19 DOI: 10.1007/s00726-023-03321-1
Anu Kumari, Mahavir Singh, Ruchi Sharma, Tarun Kumar, Naresh Jindal, Sushila Maan, Vinay G. Joshi

The emergence of antibiotic resistance prompts exploration of viable antimicrobial peptides (AMPs) designs. The present study explores the antimicrobial prospects of Apoptin nuclear localization sequence (NLS2)-derived peptide ANLP (PRPRTAKRRIRL). Further, we examined the utility of the NLS dimerization strategy for improvement in antimicrobial activity and sustained bio-stability of AMPs. Initially, the antimicrobial potential of ANLP using antimicrobial peptide databases was analyzed. Then, ANLP along with its two homodimer variants namely ANLP-K1 and ANLP-K2 were synthesized and evaluated for antimicrobial activity against Escherichia coli and Salmonella. Among three AMPs, ANLP-K2 showed efficient antibacterial activity with 12 µM minimum inhibitory concentration (MIC). Slow degradation of ANLP-K1 (26.48%) and ANLP-K2 (13.21%) compared with linear ANLP (52.33%) at 480 min in serum stability assay indicates improved bio-stability of dimeric peptides. The AMPs presented no cytotoxicity in Vero cells. Dye penetration assays confirmed the membrane interacting nature of AMPs. The zeta potential analysis reveals effective charge neutralization of both lipopolysaccharide (LPS) and bacterial cells by dimeric AMPs. The dimeric AMPs on scanning electron microscopy studies showed multiple pore formations on the bacterial surface. Collectively, proposed Lysine scaffold dimerization of Apoptin NLS2 strategy resulted in enhancing antibacterial activity, bio-stability, and could be effective in neutralizing the off-target effect of LPS. In conclusion, these results suggest that nuclear localization sequence with a modified dimeric approach could represent a rich source of template for designing future antimicrobial peptides.

抗生素耐药性的出现促使人们探索可行的抗菌肽(AMP)设计。本研究探讨了Apoptin核定位序列(NLS2)衍生肽ANLP(PRRTAKRRIRL)的抗菌前景。此外,我们研究了NLS二聚化策略在提高抗菌活性和持续生物稳定性方面的效用。最初,使用抗菌肽数据库分析ANLP的抗菌潜力。然后,合成了ANLP及其两个同源二聚体变体,即ANLP-K1和ANLP-K2,并评估了其对大肠杆菌和沙门氏菌的抗菌活性。在三种AMP中,ANLP-K2表现出有效的抗菌活性,最小抑菌浓度为12µM。在血清稳定性测定中,与线性ANLP(52.33%)相比,ANLP-K1(26.48%)和ANLP-K2(13.21%)在480分钟时的缓慢降解表明二聚肽的生物稳定性提高。AMPs在Vero细胞中没有表现出细胞毒性。染料渗透分析证实了AMPs的膜相互作用性质。ζ电位分析揭示了二聚体AMP对脂多糖(LPS)和细菌细胞的有效电荷中和作用。扫描电子显微镜研究的二聚体AMPs显示细菌表面形成了多个孔。总之,所提出的赖氨酸支架二聚Apoptin NLS2策略提高了抗菌活性和生物稳定性,并可有效中和LPS的脱靶作用。总之,这些结果表明,采用改良二聚体方法的核定位序列可以为设计未来的抗菌肽提供丰富的模板来源。
{"title":"Apoptin NLS2 homodimerization strategy for improved antibacterial activity and bio-stability","authors":"Anu Kumari,&nbsp;Mahavir Singh,&nbsp;Ruchi Sharma,&nbsp;Tarun Kumar,&nbsp;Naresh Jindal,&nbsp;Sushila Maan,&nbsp;Vinay G. Joshi","doi":"10.1007/s00726-023-03321-1","DOIUrl":"10.1007/s00726-023-03321-1","url":null,"abstract":"<div><p>The emergence of antibiotic resistance prompts exploration of viable antimicrobial peptides (AMPs) designs. The present study explores the antimicrobial prospects of Apoptin nuclear localization sequence (NLS2)-derived peptide ANLP (PRPRTAKRRIRL). Further, we examined the utility of the NLS dimerization strategy for improvement in antimicrobial activity and sustained bio-stability of AMPs. Initially, the antimicrobial potential of ANLP using antimicrobial peptide databases was analyzed. Then, ANLP along with its two homodimer variants namely ANLP-K1 and ANLP-K2 were synthesized and evaluated for antimicrobial activity against <i>Escherichia coli</i> and <i>Salmonella</i>. Among three AMPs, ANLP-K2 showed efficient antibacterial activity with 12 µM minimum inhibitory concentration (MIC). Slow degradation of ANLP-K1 (26.48%) and ANLP-K2 (13.21%) compared with linear ANLP (52.33%) at 480 min in serum stability assay indicates improved bio-stability of dimeric peptides. The AMPs presented no cytotoxicity in <i>Vero</i> cells. Dye penetration assays confirmed the membrane interacting nature of AMPs. The zeta potential analysis reveals effective charge neutralization of both lipopolysaccharide (LPS) and bacterial cells by dimeric AMPs. The dimeric AMPs on scanning electron microscopy studies showed multiple pore formations on the bacterial surface. Collectively, proposed Lysine scaffold dimerization of Apoptin NLS2 strategy resulted in enhancing antibacterial activity, bio-stability, and could be effective in neutralizing the off-target effect of LPS. In conclusion, these results suggest that nuclear localization sequence with a modified dimeric approach could represent a rich source of template for designing future antimicrobial peptides.</p></div>","PeriodicalId":7810,"journal":{"name":"Amino Acids","volume":"55 10","pages":"1405 - 1416"},"PeriodicalIF":3.5,"publicationDate":"2023-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41119296","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Amino Acids
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1