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Correction: Targeting PNPO to suppress tumor growth via inhibiting autophagic flux and to reverse paclitaxel resistance in ovarian cancer. 更正:以 PNPO 为靶点,通过抑制自噬通量抑制肿瘤生长,并逆转卵巢癌对紫杉醇的耐药性。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-04 DOI: 10.1007/s10495-024-01998-7
Xin Li, Wencai Guan, Huiqiang Liu, Jia Yuan, Fanchen Wang, Bin Guan, Junyu Chen, Qi Lu, Lingyun Zhang, Guoxiong Xu
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引用次数: 0
Comprehensive pancancer analysis reveals that LPCAT1 is a novel predictive biomarker for prognosis and immunotherapy response. 胰腺癌综合分析表明,LPCAT1 是预测预后和免疫疗法反应的新型生物标志物。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-04 DOI: 10.1007/s10495-024-02010-y
Hongyu Gao, Jinfeng Zhu, Tong Wu, Qian Long, Xinyu Guan, Qitong Chen, Wenjun Yi

Lysophosphatidylcholine acyltransferase 1 (LPCAT1) is a crucial enzyme involved in phospholipid metabolism and is essential for maintaining the structure and functionality of biofilms. However, a comprehensive examination of the role of LPCAT1 across various cancer types is lacking. Multiple public databases have been utilized to examine LPCAT1 expression, genetic alterations, methylation, prognosis, biological function, and its relationship with antitumor immunity in different cancer types. The function of LPCAT1 in glioma, breast cancer and liver cancer cells was further verified using in vitro experiments. Our research indicated that LPCAT1 is upregulated in various cancers and is accompanied by a wide range of amplification mutations. Higher LPCAT1 expression was associated with poorer prognosis across multiple cancers. Further in vitro experiments demonstrated that interfering with LPCAT1 expression increased apoptosis in glioma, breast cancer and liver cancer cells and concurrently suppressed their proliferation and migration. Functional enrichment analysis revealed that LPCAT1-associated genes were primarily enriched in immune and cancer progression pathways, such as the JAK/STAT, MYC, and EMT, etc. Moreover, LPCAT1 expression was closely associated with immune cell infiltration and immune checkpoint-related gene expression. Interestingly, LPCAT1 expression levels were generally higher in patients in the immunotherapy response group. The combination of LPCAT1 and PDL1 serves as an effective predictor of immunotherapy response. In conclusion, LPCAT1 is involved in immune regulation and tumor progression and holds promise as a biomarker for predicting patient outcomes and immunotherapy efficacy.

溶血磷脂酰胆碱酰基转移酶1(LPCAT1)是一种参与磷脂代谢的关键酶,对维持生物膜的结构和功能至关重要。然而,目前还缺乏对 LPCAT1 在各种癌症类型中作用的全面研究。我们利用多个公共数据库研究了不同癌症类型中 LPCAT1 的表达、基因改变、甲基化、预后、生物功能及其与抗肿瘤免疫的关系。体外实验进一步验证了 LPCAT1 在胶质瘤、乳腺癌和肝癌细胞中的功能。我们的研究表明,LPCAT1 在各种癌症中均呈上调趋势,并伴有多种扩增突变。在多种癌症中,LPCAT1的高表达与较差的预后有关。进一步的体外实验表明,干扰 LPCAT1 的表达可增加胶质瘤、乳腺癌和肝癌细胞的凋亡,同时抑制它们的增殖和迁移。功能富集分析显示,LPCAT1相关基因主要富集于免疫和癌症进展通路,如JAK/STAT、MYC和EMT等。此外,LPCAT1的表达与免疫细胞浸润和免疫检查点相关基因的表达密切相关。有趣的是,免疫治疗反应组患者的LPCAT1表达水平普遍较高。LPCAT1 和 PDL1 的结合可有效预测免疫治疗反应。总之,LPCAT1参与免疫调节和肿瘤进展,有望成为预测患者预后和免疫疗法疗效的生物标记物。
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引用次数: 0
SEH1L siliencing induces ferroptosis and suppresses hepatocellular carcinoma progression via ATF3/HMOX1/GPX4 axis. SEH1L siliencing通过ATF3/HMOX1/GPX4轴诱导铁变态反应并抑制肝细胞癌的进展。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-02 DOI: 10.1007/s10495-024-02009-5
Ziyang Feng, Ke Cao, Haojia Sun, Xuewen Liu

SEH1 like nucleoporin (SEH1L) is an important component of nuclear pore complex (NPC), which is crucial in the regulation of cell division. However, the interrelation between SEH1L expression and tumor progression is less studied. In this research, we performed a systematic bioinformatic analysis about SEH1L using TCGA, Timer 2.0, Cbioportal, UCLAN and CellMiner™ databases in pan-cancer. Besides, we further validated the bioinformatic results through in vitro and in vivo experiments in HCC, including transcriptome sequencing, real-time quantitative PCR (RT-qPCR), western blotting (WB), immunohistochemistry (IHC), cell proliferation assays, clone formation, EdU, transwell, flow cytometry and subcutaneous tumor model. Our results suggested that SEH1L was significantly up-regulated and related to poor prognosis in most cancers, and may serve as a potential biomarker. SEH1L could promote HCC progression in vitro and in vivo. Besides, the next generation sequencing suggested that 684 genes was significantly up-regulated and 678 genes was down-regulated after the knock down of SEH1L. SEH1L siliencing could activate ATF3/HMOX1/GPX4 axis, decrease mitochondrial membrane potential and GSH, but increase ROS and MDA, and these effects could be reversed by the knock down of ATF3. This study indicated that SEH1L siliencing could induce ferroptosis and suppresses hepatocellular carcinoma (HCC) progression via ATF3/HMOX1/GPX4 axis.

SEH1 Like nucleoporin(SEH1L)是核孔复合体(NPC)的重要组成部分,对细胞分裂的调控至关重要。然而,有关 SEH1L 表达与肿瘤进展之间相互关系的研究较少。在这项研究中,我们利用 TCGA、Timer 2.0、Cbioportal、UCLAN 和 CellMiner™ 等泛癌症数据库对 SEH1L 进行了系统的生物信息学分析。此外,我们还通过 HCC 的体外和体内实验进一步验证了生物信息学结果,包括转录组测序、实时定量 PCR(RT-qPCR)、Western 印迹(WB)、免疫组化(IHC)、细胞增殖实验、克隆形成、EdU、transwell、流式细胞术和皮下肿瘤模型。我们的研究结果表明,SEH1L明显上调,与大多数癌症的不良预后有关,可作为一种潜在的生物标志物。SEH1L 在体外和体内均可促进 HCC 的进展。此外,新一代测序表明,敲除 SEH1L 后,684 个基因被显著上调,678 个基因被下调。SEH1L基因敲除可激活ATF3/HMOX1/GPX4轴,降低线粒体膜电位和GSH,但增加ROS和MDA,而这些效应可被ATF3基因敲除所逆转。该研究表明,SEH1L siliencing可诱导铁变态反应,并通过ATF3/HMOX1/GPX4轴抑制肝细胞癌(HCC)的进展。
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引用次数: 0
Induction of the mitochondrial pathway of apoptosis by enrofloxacin in the context of the safety issue of its use in poultry. 恩诺沙星诱导线粒体凋亡的途径与在家禽中使用该药物的安全问题。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-01 Epub Date: 2024-01-28 DOI: 10.1007/s10495-024-01937-6
Łukasz Grabowski, Marta Choszcz, Karolina Wiśniewska, Lidia Gaffke, Dominika Namiotko, Magdalena Podlacha, Alicja Węgrzyn, Grzegorz Węgrzyn, Karolina Pierzynowska

The overuse of antibiotics in both humans and livestock has led to the antibiotic resistance phenomenon which is now considered one of the biggest problems in the modern world. Some antibiotics used to control or prevent infections in livestock poultry were registered a long time ago, and as a result, data on the possible side effects of their use, both for birds and humans, are incomplete and should be updated. An example of such an antibiotic is enrofloxacin which has been widely used in poultry since 1989. Data in recent years have begun to indicate that this antibiotic induces the process of apoptosis in diverse types of eukaryotic cells. Unfortunately, such studies have never been conducted on chicken models even though it is in poultry that this antibiotic is most commonly used. Therefore, the purpose of this work was to investigate whether enrofloxacin induces apoptosis in chicken cells of the UMNSAH/DF-1 line and to study the molecular mechanism of its action. The results of these experiments indicated that enrofloxacin induces apoptosis in chicken cells but not in human HEK-293 and PC3 cells. This induction was accompanied by changes in the morphology and size of mitochondria, the process of apoptosome formation and activation of executive caspases, which clearly indicates the role of the mitochondrial pathway in the induction of apoptosis by enrofloxacin. This study is the first to show the toxicity of enrofloxacin against chicken cells and to demonstrate the exact mechanism of its action. The results presented in this work show the need to monitor the concentration of antibiotic residues in poultry foods as well as to study their impact on public health to guarantee consumer safety and prevent the phenomenon of antibiotic resistance in bacteria.

抗生素在人类和家畜中的过度使用导致了抗生素耐药性现象,这一现象现已被视为现代世界最大的问题之一。一些用于控制或预防家畜家禽感染的抗生素是很早以前注册的,因此,有关使用这些抗生素对禽类和人类可能产生的副作用的数据并不完整,应予以更新。恩诺沙星就是这样一种抗生素,自 1989 年以来一直在家禽中广泛使用。近年来的数据开始表明,这种抗生素会诱导各种真核细胞的凋亡过程。遗憾的是,尽管这种抗生素最常用于家禽,但从未在鸡模型上进行过此类研究。因此,这项工作的目的是研究恩诺沙星是否能诱导 UMNSAH/DF-1 株鸡细胞凋亡,并研究其作用的分子机制。实验结果表明,恩诺沙星能诱导鸡细胞凋亡,但不能诱导人类 HEK-293 细胞和 PC3 细胞凋亡。这种诱导伴随着线粒体形态和大小的变化、凋亡小体的形成过程和执行Caspases的激活,这清楚地表明线粒体途径在恩诺沙星诱导细胞凋亡中的作用。这项研究首次显示了恩诺沙星对鸡细胞的毒性,并证明了其确切的作用机制。研究结果表明,有必要对禽类食品中的抗生素残留浓度进行监测,并研究其对公众健康的影响,以保证消费者的安全,防止细菌产生抗生素耐药性。
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引用次数: 0
Acetylation of FOXO1 activates Bim expression involved in CVB3 induced cardiomyocyte apoptosis. FOXO1 乙酰化激活 Bim 的表达,参与 CVB3 诱导的心肌细胞凋亡。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-01 Epub Date: 2023-12-21 DOI: 10.1007/s10495-023-01924-3
Yanan Hu, Lu Yi, Yeyi Yang, Zhixiang Wu, Min Kong, Zhijuan Kang, Zuocheng Yang

Viral myocarditis (VMC) is the major reason for sudden cardiac death among both children and young adults. Of these, coxsackievirus B3 (CVB3) is the most common causative agent of myocarditis. Recently, the role of signaling pathways in the pathogenesis of VMC has been evaluated in several studies, which has provided a new perspective on identifying potential therapeutic targets for this hitherto incurable disease. In the present study, in vivo and in vitro experiments showed that CVB3 infection leads to increased Bim expression and triggers apoptosis. In addition, by knocking down Bim using RNAi, we further confirmed the biological function of Bim in apoptosis induced by CVB3 infection. We additionally found that Bim and forkhead box O1 class (FOXO1) inhibition significantly increased the viability of CVB3-infected cells while blocking viral replication and viral release. Moreover, CVB3-induced Bim expression was directly dependent on FOXO1 acetylation, which is catalyzed by the co-regulation of CBP and SirTs. Furthermore, the acetylation of FOXO1 was an important step in Bim activation and apoptosis induced by CVB3 infection. The findings of this study suggest that CVB3 infection induces apoptosis through the FOXO1 acetylation-Bim pathway, thus providing new insights for developing potential therapeutic targets for enteroviral myocarditis.

病毒性心肌炎(VMC)是儿童和青少年心脏性猝死的主要原因。其中,柯萨奇病毒 B3(CVB3)是心肌炎最常见的致病因子。最近,多项研究评估了信号通路在 VMC 发病机制中的作用,这为确定这种迄今无法治愈的疾病的潜在治疗靶点提供了新的视角。在本研究中,体内和体外实验表明,CVB3 感染会导致 Bim 表达增加并引发细胞凋亡。此外,通过使用 RNAi 敲除 Bim,我们进一步证实了 Bim 在 CVB3 感染诱导的细胞凋亡中的生物学功能。我们还发现,抑制 Bim 和叉头框 O1 类(FOXO1)可显著提高 CVB3 感染细胞的存活率,同时阻止病毒复制和病毒释放。此外,CVB3诱导的Bim表达直接依赖于FOXO1乙酰化,而FOXO1乙酰化是由CBP和SirTs共同调控催化的。此外,FOXO1的乙酰化是CVB3感染诱导Bim活化和细胞凋亡的重要步骤。该研究结果表明,CVB3感染通过FOXO1乙酰化-Bim途径诱导细胞凋亡,从而为开发肠道病毒性心肌炎的潜在治疗靶点提供了新的见解。
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引用次数: 0
YAP/TAZ-TEAD activity promotes the malignant transformation of cervical intraepithelial neoplasia through enhancing the characteristics and Warburg effect of cancer stem cells. YAP/TAZ-TEAD活性通过增强癌症干细胞的特征和沃伯格效应促进宫颈上皮内瘤变的恶性转化。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-01 Epub Date: 2024-03-29 DOI: 10.1007/s10495-023-01935-0
Shu Li, Xing Li, Yong-Bin Yang, Su-Fang Wu

A number of studies have confirmed that Yes-associated protein (YAP)/transcriptional co-activator with PDZ-binding motif (TAZ)-transcriptional enhanced associate domain (TEAD) activity is the driver of cancer development. However, the role and mechanism of the YAP/TAZ-TEAD pathway in cervical intraepithelial neoplasia (CIN) remain to be clarified. Therefore, this study was designed to observe the effect of YAP/TAZ-TEAD activity on the development of CIN and provide new ideas for the diagnosis and treatment of CIN. Firstly, cervical tissues were collected from CIN patients in different stages [CIN grade 1 (CIN1) tissue, CIN grade 2/3 (CIN 2/3) and squamous cell carcinoma (SCC)] and healthy volunteers. Next, the expression levels of YAP, TAZ and TEAD in cervical tissues and cells were observed by immunohistochemistry, qRT-PCR and western blot. Besides, Z172 and Z183 cells were transfected with siRNA-YAP/TAZ (si-YAP/TAZ) and YAP/TAZ overexpression vector (YAP-5SA). Also, Z172 cells were co-transfected with YAP-5SA and si-TEAD2/4. Subsequently, the stemness characteristics, glycolysis level and malignant transformation of cells in each group were observed by sphere-formation assay, commercial kit, MTT, Transwell, scratch experiment, xenotransplantation and western blot.The expression of YAP, TAZ and TEAD increased significantly in cervical cancer tissue and cell line at the stage of CIN2/3 and SCC. When YAP/TAZ was knocked down, the stemness characteristics, glycolysis level and malignant transformation of cancer cells were notably inhibited; while activating YAP/TAZ exhibited a completely opposite result. In addition, activating YAP/TAZ and knocking down the TEAD expression at the same time significant weakened the effect of activated YAP/TAZ signal on precancerous cells and reduced inhibitory effect of knocking down TEAD alone. YAP/TAZ-TEAD signal activates the characteristics and Warburg effect of cancer stem cells, thereby promoting the malignant transformation of CIN.

大量研究证实,Yes 相关蛋白(YAP)/具有 PDZ 结合基调的转录协同激活因子(TAZ)-转录增强关联结构域(TEAD)的活性是癌症发展的驱动力。然而,YAP/TAZ-TEAD 通路在宫颈上皮内瘤变(CIN)中的作用和机制仍有待明确。因此,本研究旨在观察YAP/TAZ-TEAD活性对CIN发展的影响,为CIN的诊断和治疗提供新思路。首先,研究人员采集了不同分期的 CIN 患者(CIN 1 级(CIN1)组织、CIN 2/3 级(CIN 2/3)和鳞状细胞癌(SCC))以及健康志愿者的宫颈组织。然后,通过免疫组化、qRT-PCR 和 Western 印迹法观察 YAP、TAZ 和 TEAD 在宫颈组织和细胞中的表达水平。此外,用 siRNA-YAP/TAZ(si-YAP/TAZ)和 YAP/TAZ 过表达载体(YAP-5SA)转染 Z172 和 Z183 细胞。此外,Z172细胞也转染了YAP-5SA和si-TEAD2/4。在宫颈癌组织和细胞系中,YAP、TAZ和TEAD的表达在CIN2/3和SCC阶段显著增加。当敲除 YAP/TAZ 时,癌细胞的干性特征、糖酵解水平和恶性转化受到明显抑制;而激活 YAP/TAZ 则表现出完全相反的结果。此外,在激活 YAP/TAZ 的同时敲除 TEAD 的表达,会显著削弱激活的 YAP/TAZ 信号对癌前细胞的作用,并降低单独敲除 TEAD 的抑制效果。YAP/TAZ-TEAD信号激活了癌症干细胞的特性和沃伯格效应,从而促进了CIN的恶性转化。
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引用次数: 0
ARTS and small-molecule ARTS mimetics upregulate p53 levels by promoting the degradation of XIAP. ARTS和小分子ARTS模拟物通过促进XIAP降解来上调p53水平。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-01 Epub Date: 2024-04-29 DOI: 10.1007/s10495-024-01957-2
Ruqaia Abbas, Oliver Hartmann, Dorin Theodora Asiss, Rabab Abbas, Julia Kagan, Hyoung-Tae Kim, Moshe Oren, Markus Diefenbacher, Amir Orian, Sarit Larisch

Mutations resulting in decreased activity of p53 tumor suppressor protein promote tumorigenesis. P53 protein levels are tightly regulated through the Ubiquitin Proteasome System (UPS). Several E3 ligases were shown to regulate p53 stability, including MDM2. Here we report that the ubiquitin E3 ligase XIAP (X-linked Inhibitors of Apoptosis) is a direct ligase for p53 and describe a novel approach for modulating the levels of p53 by targeting the XIAP pathway. Using in vivo (live-cell) and in vitro (cell-free reconstituted system) ubiquitylation assays, we show that the XIAP-antagonist ARTS regulates the levels of p53 by promoting the degradation of XIAP. XIAP directly binds and ubiquitylates p53. In apoptotic cells, ARTS inhibits the ubiquitylation of p53 by antagonizing XIAP. XIAP knockout MEFs express higher p53 protein levels compared to wild-type MEFs. Computational screen for small molecules with high affinity to the ARTS-binding site within XIAP identified a small-molecule ARTS-mimetic, B3. This compound stimulates apoptosis in a wide range of cancer cells but not normal PBMC (Peripheral Blood Mononuclear Cells). Like ARTS, the B3 compound binds to XIAP and promotes its degradation via the UPS. B3 binding to XIAP stabilizes p53 by disrupting its interaction with XIAP. These results reveal a novel mechanism by which ARTS and p53 regulate each other through an amplification loop to promote apoptosis. Finally, these data suggest that targeting the ARTS binding pocket in XIAP can be used to increase p53 levels as a new strategy for developing anti-cancer therapeutics.

导致 p53 肿瘤抑制蛋白活性降低的突变会促进肿瘤发生。P53 蛋白水平通过泛素蛋白酶体系统(UPS)进行严格调节。研究表明,包括 MDM2 在内的几种 E3 连接酶可调节 p53 的稳定性。在这里,我们报告了泛素 E3 连接酶 XIAP(X-连锁凋亡抑制因子)是 p53 的直接连接酶,并描述了一种通过靶向 XIAP 途径调节 p53 水平的新方法。我们利用体内(活细胞)和体外(无细胞重组系统)泛素化试验表明,XIAP拮抗剂ARTS通过促进XIAP的降解来调节p53的水平。XIAP 直接结合并泛素化 p53。在凋亡细胞中,ARTS 通过拮抗 XIAP 来抑制 p53 的泛素化。与野生型 MEF 相比,XIAP 基因敲除的 MEF 表达更高的 p53 蛋白水平。通过计算筛选与 XIAP 内 ARTS 结合位点具有高亲和力的小分子,发现了一种 ARTS 小分子模拟物 B3。这种化合物能刺激多种癌细胞凋亡,但不能刺激正常的 PBMC(外周血单核细胞)。与 ARTS 类似,B3 复合物也能与 XIAP 结合,并通过 UPS 促进其降解。与 XIAP 结合的 B3 会破坏 p53 与 XIAP 的相互作用,从而稳定 p53。这些结果揭示了一种新的机制,即 ARTS 和 p53 通过放大环相互调节,从而促进细胞凋亡。最后,这些数据表明,靶向 XIAP 中的 ARTS 结合袋可用于提高 p53 水平,是开发抗癌疗法的一种新策略。
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引用次数: 0
EVA1A reverses lenvatinib resistance in hepatocellular carcinoma through regulating PI3K/AKT/p53 signaling axis. EVA1A通过调节PI3K/AKT/p53信号轴逆转来伐替尼对肝癌的耐药性
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-01 Epub Date: 2024-05-14 DOI: 10.1007/s10495-024-01967-0
Xiaokun Liu, Xiao Gao, Yuling Yang, Di Yang, Qingming Guo, Lianhui Li, Shunlong Liu, Wanxin Cong, Sen Lu, Lin Hou, Bin Wang, Ning Li

Lenvatinib is a commonly used first-line drug for the treatment of advanced hepatocellular carcinoma (HCC). However, its clinical efficacy is limited due to the drug resistance. EVA1A was a newly identified tumor suppressor, nevertheless, the impact of EVA1A on resistance to lenvatinib treatment in HCC and the potential molecular mechanisms remain unknown. In this study, the expression of EVA1A in HCC lenvatinib-resistant cells is decreased and its low expression was associated with a poor prognosis of HCC. Overexpression of EVA1A reversed lenvatinib resistance in vitro and in vivo, as demonstrated by its ability to promote cell apoptosis and inhibit cell proliferation, invasion, migration, EMT, and tumor growth. Silencing EVA1A in lenvatinib-sensitive parental HCC cells exerted the opposite effect and induced resistance to lenvatinib. Mechanistically, upregulated EVA1A inhibited the PI3K/AKT/MDM2 signaling pathway, resulting in a reduced interaction between MDM2 and p53, thereby stabilizing p53 and enhancing its antitumor activity. In addition, upregulated EVA1A suppressed the PI3K/AKT/mTOR signaling pathway and promoted autophagy, leading to the degradation of mutant p53 and attenuating its oncogenic impact. On the contrary, loss of EVA1A activated the PI3K/AKT/MDM2 signaling pathway and inhibited autophagy, promoting p53 proteasomal degradation and mutant p53 accumulation respectively. These findings establish a crucial role of EVA1A loss in driving lenvatinib resistance involving a mechanism of modulating PI3K/AKT/p53 signaling axis and suggest that upregulating EVA1A is a promising therapeutic strategy for alleviating resistance to lenvatinib, thereby improving the efficacy of HCC treatment.

伦伐替尼是治疗晚期肝细胞癌(HCC)的常用一线药物。然而,由于耐药性的存在,其临床疗效受到了限制。EVA1A是一种新发现的肿瘤抑制因子,然而,EVA1A对来伐替尼治疗HCC耐药的影响及其潜在的分子机制仍不清楚。本研究发现,EVA1A在HCC来伐替尼耐药细胞中的表达降低,其低表达与HCC的不良预后相关。EVA1A的过表达可逆转体外和体内的伦伐替尼耐药性,这表现在它能促进细胞凋亡,抑制细胞增殖、侵袭、迁移、EMT和肿瘤生长。在对来伐替尼敏感的亲代HCC细胞中沉默EVA1A则会产生相反的效果,诱导细胞对来伐替尼产生耐药性。从机理上讲,上调的EVA1A抑制了PI3K/AKT/MDM2信号通路,导致MDM2与p53之间的相互作用减少,从而稳定了p53并增强了其抗肿瘤活性。此外,上调的EVA1A抑制了PI3K/AKT/mTOR信号通路,促进了自噬,导致突变体p53降解,减轻了其致癌影响。相反,EVA1A的缺失会激活PI3K/AKT/MDM2信号通路并抑制自噬,分别促进p53蛋白酶体降解和突变体p53的积累。这些发现确立了EVA1A缺失在驱动来伐替尼耐药中的关键作用,涉及PI3K/AKT/p53信号轴的调控机制,并表明上调EVA1A是缓解来伐替尼耐药的一种有前景的治疗策略,从而提高了HCC的疗效。
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引用次数: 0
Machine learning framework develops neutrophil extracellular traps model for clinical outcome and immunotherapy response in lung adenocarcinoma. 机器学习框架开发出中性粒细胞胞外捕获物模型,可用于肺腺癌的临床结果和免疫疗法反应。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-01 Epub Date: 2024-03-22 DOI: 10.1007/s10495-024-01947-4
A Xuan Han, B Yaping Long, C Yao Li, D Di Huang, E Qi Xiong, F Jinfeng Li, G Liangliang Wu, Qiaowei Liu, G Bo Yang, H Yi Hu

Neutrophil extracellular traps (NETs) are novel inflammatory cell death in neutrophils. Emerging studies demonstrated NETs contributed to cancer progression and metastases in multiple ways. This study intends to provide a prognostic NETs signature and therapeutic target for lung adenocarcinoma (LUAD) patients. Consensus cluster analysis performed by 38 reported NET-related genes in TCGA-LUAD cohorts. Then, WGCNA network was conducted to investigate characteristics genes in clusters. Seven machine learning algorithms were assessed for training of the model, the optimal model was picked by C-index and 1-, 3-, 5-year ROC value. Then, we constructed a NETs signature to predict the overall survival of LUAD patients. Moreover, multi-omics validation was performed based on NETs signature. Finally, we constructed stable knockdown critical gene LUAD cell lines to verify biological functions of Phospholipid Scramblase 1 (PLSCR1) in vitro and in vivo. Two NETs-related clusters were identified in LUAD patients. Among them, C2 cluster was provided as "hot" tumor phenotype and exhibited a better prognosis. Then, WGCNA network identified 643 characteristic genes in C2 cluster. Then, Coxboost algorithm proved its optimal performance and provided a prognostic NETs signature. Multi-omics revealed that NETs signature was involved in an immunosuppressive microenvironment and predicted immunotherapy efficacy. In vitro and in vivo experiments demonstrated that knockdown of PLSCR1 inhibited tumor growth and EMT ability. Besides, cocultural assay indicated that the knockdown of PLSCR1 impaired the ability of neutrophils to generate NETs. Finally, tissue microarray (TMA) for LUAD patients verified the prognostic value of PLSCR1 expression. In this study, we focus on emerging hot topic NETs in LUAD. We provide a prognostic NETs signature and identify PLSCR1 with multiple roles in LUAD. This work can contribute to risk stratification and screen novel therapeutic targets for LUAD patients.

中性粒细胞胞外捕获物(NETs)是中性粒细胞中一种新型的炎症性死亡细胞。新近的研究表明,NETs 以多种方式促进了癌症的进展和转移。本研究旨在为肺腺癌(LUAD)患者提供NETs预后特征和治疗靶点。对 TCGA-LUAD 队列中报告的 38 个 NET 相关基因进行了共识聚类分析。然后,通过 WGCNA 网络研究聚类中的特征基因。对七种机器学习算法进行了模型训练评估,根据C-指数和1年、3年、5年ROC值选出了最佳模型。然后,我们构建了一个NETs特征来预测LUAD患者的总生存率。此外,我们还根据NETs特征进行了多组学验证。最后,我们构建了稳定敲除关键基因的LUAD细胞系,以验证磷脂重组酶1(PLSCR1)在体外和体内的生物学功能。在LUAD患者中发现了两个与NET相关的基因簇。其中,C2群是 "热门 "肿瘤表型,预后较好。然后,WGCNA 网络在 C2 群组中发现了 643 个特征基因。然后,Coxboost算法证明了其最佳性能,并提供了预后NETs特征。多组学发现,NETs特征参与了免疫抑制微环境,并预测了免疫疗法的疗效。体外和体内实验表明,敲除PLSCR1可抑制肿瘤生长和EMT能力。此外,细胞培养试验表明,敲除 PLSCR1 会削弱中性粒细胞生成 NET 的能力。最后,LUAD 患者的组织芯片(TMA)验证了 PLSCR1 表达的预后价值。在本研究中,我们聚焦于 LUAD 中新出现的热点话题 NETs。我们提供了一个预后NETs特征,并确定了PLSCR1在LUAD中的多重作用。这项工作有助于对LUAD患者进行风险分层和筛选新的治疗靶点。
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引用次数: 0
Mechanisms of cuproptosis and its relevance to distinct diseases. 杯状突变的机制及其与不同疾病的相关性。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-01 Epub Date: 2024-06-02 DOI: 10.1007/s10495-024-01983-0
Qiao-Mei Lou, Fei-Fan Lai, Jing-Wei Li, Kun-Jun Mao, Hai-Tong Wan, Yu He

Copper is a trace element required by the organism, but once the level of copper exceeds the threshold, it becomes toxic and even causes death. The underlying mechanisms of copper-induced death are inconclusive, with different studies showing different opinions on the mechanism of copper-induced death. Multiple investigations have shown that copper induces oxidative stress, endoplasmic reticulum stress, nucleolar stress, and proteasome inhibition, all of which can result in cell death. The latest research elucidates a copper-dependent death and denominates it as cuproptosis. Cuproptosis takes place through the combination of copper and lipoylated proteins of the tricarboxylic acid cycle, triggering agglomeration of lipoylated proteins and loss of iron-sulfur cluster proteins, leading to proteotoxic stress and ultimately death. Given the toxicity and necessity of copper, abnormal levels of copper lead to diseases such as neurological diseases and cancer. The development of cancer has a high demand for copper, neurological diseases involve the change of copper contents and the binding of copper to proteins. There is a close relationship between these two kinds of diseases and copper. Here, we summarize the mechanisms of copper-related death, and the association between copper and diseases, to better figure out the influence of copper in cell death and diseases, thus advancing the clinical remedy of these diseases.

铜是生物体所需的微量元素,但一旦铜的含量超过阈值,就会产生毒性,甚至导致死亡。铜诱导死亡的内在机制尚无定论,不同的研究对铜诱导死亡的机制有不同的看法。多项研究表明,铜可诱导氧化应激、内质网应激、细胞核应激和蛋白酶体抑制,所有这些都会导致细胞死亡。最新研究阐明了铜依赖性死亡,并将其命名为杯突症。杯突症是通过铜与三羧酸循环中的脂酰化蛋白质结合,引发脂酰化蛋白质的聚集和铁硫簇蛋白质的丧失,导致蛋白质毒性应激,最终导致死亡。鉴于铜的毒性和必要性,铜含量异常会导致神经系统疾病和癌症等疾病。癌症的发生对铜的需求量很大,神经系统疾病涉及铜含量的变化以及铜与蛋白质的结合。这两种疾病与铜之间有着密切的关系。在此,我们总结了与铜有关的死亡机制,以及铜与疾病之间的关联,以便更好地弄清铜在细胞死亡和疾病中的影响,从而推进这些疾病的临床治疗。
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Apoptosis
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