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Exosomal miR-93-5p Modulates Macrophage Polarization to Enhance Prostate Cancer Progression. 外泌体miR-93-5p调节巨噬细胞极化促进前列腺癌进展
IF 3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-28 DOI: 10.1016/j.abb.2026.110753
Yarong Wang, Wenjun Chen, Bei Yu, Liang Wang, Wei Tang

Background: Prostate cancer (PC) remains a major public health challenge, with emerging evidence suggesting that microRNA-93-5p (miR-93-5p) plays a critical role in cancer progression.

Aim: This study investigated how exosomal miR-93-5p derived from PC cells modulates tumor-associated macrophage (TAM) polarization and influences PC progression, while elucidating the underlying molecular mechanisms.

Methods: We analyzed miR-93-5p expression levels in PC tissues and serum samples, followed by detailed characterization of PC cell-derived exosomes. Subsequently, we evaluated the capacity of these exosomes to induce macrophage polarization, examined the regulatory relationship between miR-93-5p and suppressor of cytokine signaling 6 (SOCS6), and assessed the activation status of the Janus kinase 2/signal transducer and activator of transcription 3 (JAK2/STAT3) signaling pathway.

Results: Elevated miR-93-5p levels in PC tissues and serum were significantly associated with metastatic features. We demonstrated that PC cell-derived exosomes enriched with miR-93-5p effectively reprogram macrophages toward an immunosuppressive M2 phenotype. Mechanistically, this polarization was mediated through miR-93-5p-induced downregulation of SOCS6, a negative regulator of cytokine signaling, leading to subsequent activation of the JAK2/STAT3 pathway, which enhances PC cell motility and invasiveness. Importantly, xenograft experiments confirmed that miR-93-5p-enriched macrophages substantially accelerated tumor growth in vivo.

Conclusion: Our findings reveal that exosomal miR-93-5p from PC cells drives M2 macrophage polarization and disease progression through SOCS6 suppression and JAK2/STAT3 pathway activation. These results identify exosomal miR-93-5p as a promising therapeutic target and provide new avenues for developing innovative treatment strategies against PC.

背景:前列腺癌(PC)仍然是一个主要的公共卫生挑战,新出现的证据表明microRNA-93-5p (miR-93-5p)在癌症进展中起着关键作用。目的:本研究探讨来自PC细胞的外泌体miR-93-5p如何调节肿瘤相关巨噬细胞(TAM)极化并影响PC的进展,同时阐明潜在的分子机制。方法:我们分析了miR-93-5p在PC组织和血清样本中的表达水平,然后对PC细胞来源的外泌体进行了详细的表征。随后,我们评估了这些外泌体诱导巨噬细胞极化的能力,检测了miR-93-5p与细胞因子信号传导6抑制因子(SOCS6)之间的调控关系,并评估了Janus激酶2/信号换能器和转录激活因子3 (JAK2/STAT3)信号通路的激活状态。结果:PC组织和血清中miR-93-5p水平升高与转移特征显著相关。我们证明了富含miR-93-5p的PC细胞来源的外泌体有效地将巨噬细胞重编程为免疫抑制的M2表型。在机制上,这种极化是通过mir -93-5p诱导的SOCS6下调介导的,SOCS6是细胞因子信号的负调节因子,导致随后JAK2/STAT3通路的激活,从而增强PC细胞的运动和侵袭性。重要的是,异种移植实验证实,mir -93-5p富集的巨噬细胞在体内显著加速了肿瘤的生长。结论:我们的研究结果表明,来自PC细胞的外泌体miR-93-5p通过SOCS6抑制和JAK2/STAT3通路激活驱动M2巨噬细胞极化和疾病进展。这些结果确定了外泌体miR-93-5p是一个有希望的治疗靶点,并为开发针对PC的创新治疗策略提供了新的途径。
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引用次数: 0
LncRNA KCNQ1OT1 modulates M2 macrophage polarization and angiogenic signaling via the miR-142-3p/TRIM24 axis in retinal neovascularization. LncRNA kcnq10t1通过miR-142-3p/TRIM24轴调节视网膜新生血管中M2巨噬细胞极化和血管生成信号。
IF 3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-26 DOI: 10.1016/j.abb.2026.110750
Chunhong Yu, Weiwei Xiong, Yuezhi Zhang, Hongwei Lu, Liwen Xu, Zijing Ouyang

Background: Retinopathy of prematurity (ROP) is a major cause of childhood blindness, driven by hypoxia-induced VEGF overproduction. Anti-VEGF therapy has limitations including recurrence and potential side effects, highlighting the need for upstream interventions. M2 macrophages contribute to ROP pathogenesis, but the regulatory mechanisms controlling their polarization remain unclear.

Methods: We explored the regulatory interplay among lncRNA KCNQ1OT1, miR-142-3p, and TRIM24 in RAW264.7 and THP-1 macrophages, human retinal microvascular endothelial cells (HRMECs), and an oxygen-induced retinopathy (OIR) mouse model. Interactions were validated via dual-luciferase reporter, RNA immunoprecipitation, and RNA pull-down assays. Effects on macrophage polarization and endothelial function were assessed using flow cytometry, immunofluorescence, and proliferation, migration, and tube formation assays. OIR mice received AAV-mediated KCNQ1OT1 delivery, followed by retinal histology, immunostaining, cytokine measurements, TUNEL assays, RT-qPCR, and Western blot analyses.

Results: KCNQ1OT1 acted as a competitive endogenous RNA to sequester miR-142-3p, partially relieving suppression of TRIM24 and attenuating STAT6-mediated M2 polarization. In macrophages, KCNQ1OT1 overexpression reduced M2 markers and VEGFA expression, diminishing pro-angiogenic effects on HRMECs. In OIR mice, AAV-KCNQ1OT1 delivery was associated with reduced retinal neovascularization, decreased M2 macrophage infiltration, and lower VEGFA and inflammatory cytokine levels.

Conclusions: The KCNQ1OT1/miR-142-3p/TRIM24 axis influences macrophage polarization and angiogenic signaling in ROP. While preliminary, these findings suggest that targeting this upstream regulatory network may complement existing VEGF-targeted therapies.

背景:早产儿视网膜病变(ROP)是儿童失明的主要原因,由缺氧诱导的VEGF过度产生驱动。抗vegf治疗有局限性,包括复发和潜在的副作用,强调了上游干预的必要性。M2巨噬细胞参与ROP发病机制,但调控其极化的调控机制尚不清楚。方法:研究lncRNA KCNQ1OT1、miR-142-3p和TRIM24在RAW264.7和THP-1巨噬细胞、人视网膜微血管内皮细胞(HRMECs)和氧诱导视网膜病变(OIR)小鼠模型中的调控相互作用。通过双荧光素酶报告基因、RNA免疫沉淀和RNA下拉试验验证相互作用。通过流式细胞术、免疫荧光、增殖、迁移和管形成试验评估巨噬细胞极化和内皮功能的影响。OIR小鼠接受aav介导的kcnq10t1递送,随后进行视网膜组织学、免疫染色、细胞因子测定、TUNEL测定、RT-qPCR和Western blot分析。结果:kcnq10t1作为竞争性内源性RNA隔离miR-142-3p,部分缓解TRIM24的抑制,减弱stat6介导的M2极化。在巨噬细胞中,kcnq10t1过表达降低了M2标记物和VEGFA的表达,减弱了对hrmec的促血管生成作用。在OIR小鼠中,aav - kcnq10t1递送与视网膜新生血管减少、M2巨噬细胞浸润减少、VEGFA和炎症细胞因子水平降低有关。结论:kcnq10t1 /miR-142-3p/TRIM24轴影响ROP中巨噬细胞极化和血管生成信号。虽然是初步的,但这些发现表明,针对这一上游调控网络可能会补充现有的vegf靶向治疗。
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引用次数: 0
Exosomes derived from HISLA overexpressed-adipose stem cells accelerate wound healing in diabetic foot ulcers by regulating HIF-1α signal transduction. 来自HISLA过表达的脂肪干细胞的外泌体通过调节HIF-1α信号转导加速糖尿病足溃疡的伤口愈合。
IF 3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-23 DOI: 10.1016/j.abb.2026.110747
Wei Zhao, Haili Zhang, Shujun Liu, Yahui Cao, Caisheng Wang, Yanfei Wang

Diabetic foot ulcers (DFUs), characterized by impaired angiogenesis and a chronic inflammatory milieu, represent a severe complication of diabetes. This study investigates the therapeutic potential of exosomes derived from HISLA-overexpressing adipose-derived stem cells (HISLA-ex) in enhancing DFU healing. In vitro, under high glucose conditions, HISLA-ex significantly elevated HISLA expression by approximately 3-fold in endothelial cells, markedly improving cell viability at 24-72 h in HMEC-1 cells, reducing pro-inflammatory cytokines IL-1 and IL-6, and enhancing tube formation capacity as evidenced by increased branching points and total tube length. Subsequently, a DFU rat model was established by inducing diabetes with streptozotocin followed by creation of a full-thickness cutaneous wound on the foot dorsum. HISLA-ex application substantially accelerated wound closure and modulated key angiogenic factors: upregulating VEGFA and Ang-1 while suppressing TSP-1. Furthermore, HISLA-ex shifted the helper T (Th)1/Th2 balance by inhibiting T-bet and pro-inflammatory cytokines (IFN-γ and TNF-α) and promoting GATA3 and anti-inflammatory cytokines (IL-4 and IL-13) in vivo and in vitro. Mechanistically, these effects were mediated through activation of the HIF-1α pathway, confirmed by both gain- and loss-of-function experiments, and abolished upon HIF-1α inhibition. Collectively, our results demonstrate that HISLA-ex synchronously promotes angiogenesis and corrects Th immune dysfunction, offering a novel RNA-based exosomal therapeutic strategy for the treatment of DFUs.

糖尿病足溃疡(DFUs)以血管生成受损和慢性炎症环境为特征,是糖尿病的严重并发症。本研究探讨了来自过表达hisla的脂肪源性干细胞(HISLA-ex)的外泌体在促进DFU愈合中的治疗潜力。在体外,高糖条件下,HISLA-ex显著提高内皮细胞中HISLA的表达约3倍,显著提高HMEC-1细胞24-72小时的细胞活力,降低促炎细胞因子IL-1和IL-6,增强管形成能力,分支点和总管长增加。随后,用链脲佐菌素诱导糖尿病,并在足背处形成全层皮肤创面,建立DFU大鼠模型。HISLA-ex的应用大大加速了伤口愈合并调节了关键的血管生成因子:上调VEGFA和Ang-1,同时抑制TSP-1。此外,在体内和体外,HISLA-ex通过抑制T-bet和促炎细胞因子(IFN-γ和TNF-α),促进GATA3和抗炎细胞因子(IL-4和IL-13),改变辅助性T (Th)1/Th2平衡。从机制上讲,这些作用是通过HIF-1α途径的激活介导的,得到和功能丧失实验证实了这一点,并在HIF-1α抑制后被消除。总之,我们的研究结果表明,HISLA-ex同步促进血管生成和纠正免疫功能障碍,为治疗DFUs提供了一种新的基于rna的外泌体治疗策略。
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引用次数: 0
Dexmedetomidine attenuates hyperoxia-induced lung injury in BPD mice via regulation of the mitophagy–NLRP3–pyroptosis pathway 右美托咪定通过调节线粒体自噬- nlrp3 -焦亡通路减轻高氧诱导的BPD小鼠肺损伤。
IF 3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-23 DOI: 10.1016/j.abb.2026.110748
Yue Feng , Dong-Zhui Chen , Heng Cai, Qiu-Yue Zhang

Objective

Bronchopulmonary dysplasia (BPD) is a common chronic lung disease in preterm infants. Although dexmedetomidine (Dex) has been shown to exert lung-protective effects in experimental BPD models, the underlying molecular mechanisms remain incompletely understood. This study aimed to investigate whether Dex confers protection against hyperoxia-induced lung injury through regulation of the mitophagy–NOD-like receptor family pyrin domain-containing 3 (NLRP3) inflammasome–pyroptosis axis.

Methods

A neonatal mouse model of BPD and a hyperoxia-induced injury model in primary alveolar type II epithelial (AECII) cells were established. Gain- and loss-of-function approaches targeting PINK1/Parkin-mediated mitophagy and NLRP3 were applied. Mitophagy, inflammasome activation, mitochondrial integrity, inflammatory responses, and cell injury were evaluated using molecular, imaging, and functional assays.

Results

Dex significantly alleviated hyperoxia-induced lung injury in neonatal mice and improved the survival of AECII cells under oxidative stress. Dex treatment enhanced PINK1/Parkin-mediated mitophagy, preserved mitochondrial structure and function, suppressed NLRP3 inflammasome activation, reduced inflammatory cytokine release, and attenuated pyroptosis-related protein expression. Notably, genetic silencing of PINK1 abolished the protective effects of Dex, while NLRP3 overexpression partially reversed Dex-mediated anti-inflammatory and cytoprotective effects, indicating a mechanistic link between mitophagy activation and inflammasome inhibition.

Conclusion

Dex protects against hyperoxia-induced lung injury by activating PINK1/Parkin-dependent mitophagy, maintaining mitochondrial homeostasis, inhibiting NLRP3 inflammasome activation, and suppressing pyroptosis. These findings provide mechanistic insight into the therapeutic potential of Dex for the prevention and treatment of BPD.
目的:支气管肺发育不良(BPD)是早产儿常见的慢性肺部疾病。虽然右美托咪定(右美托咪定)在实验性BPD模型中显示出肺保护作用,但其潜在的分子机制仍不完全清楚。本研究旨在探讨Dex是否通过调节线粒体自噬- nod样受体家族pyrin结构域- 3 (NLRP3)炎症小体-焦亡轴,对高氧诱导的肺损伤具有保护作用。方法:建立新生小鼠BPD模型和原代肺泡II型上皮细胞(AECII)高氧损伤模型。应用靶向PINK1/ parkinson介导的有丝分裂和NLRP3的功能获得和功能丧失方法。线粒体自噬、炎性体激活、线粒体完整性、炎症反应和细胞损伤通过分子、成像和功能分析进行评估。结果:右美托咪唑能明显减轻新生小鼠高氧诱导的肺损伤,提高氧化应激下AECII细胞的存活率。Dex治疗增强了PINK1/ parkin介导的线粒体自噬,保存了线粒体结构和功能,抑制了NLRP3炎症小体的激活,减少了炎症细胞因子的释放,减弱了焦热相关蛋白的表达。值得注意的是,PINK1的基因沉默消除了Dex的保护作用,而NLRP3的过表达部分逆转了Dex介导的抗炎和细胞保护作用,表明有丝分裂激活和炎症小体抑制之间存在机制联系。结论:右美托咪唑通过激活PINK1/ parkin依赖性线粒体自噬,维持线粒体稳态,抑制NLRP3炎性体活化,抑制焦亡,对高氧诱导的肺损伤具有保护作用。这些发现为右美托咪唑预防和治疗BPD的治疗潜力提供了机制上的见解。
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引用次数: 0
Influence of HIF1A-AS2 and miR-590-3p on trophoblast function and inflammation control in HTR-8/SVneo trophoblast cells. HIF1A-AS2和miR-590-3p对HTR-8/SVneo滋养细胞功能和炎症控制的影响
IF 3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-20 DOI: 10.1016/j.abb.2026.110738
Peiqu Zhong, Xiaoping Jia, Qiongfang Chen, Fengmei Tang, Wanying Liang, Youcai Liang, Jiayuan Zhang, Lijian Zhao

Hypoxia-inducible factor 1 alpha antisense RNA 2 (HIF1A-AS2) and microRNA-590-3p (miR-590-3p) have been linked to inflammation and preeclampsia. In HTR-8/SVneo cells, HIF1A-AS2 was overexpressed and miR-590-3p mimic was introduced, and proliferation, migration/invasion and apoptosis were assessed by proliferation assays, wound-healing and Matrigel invasion assays, and flow cytometry, while molecular alterations were analyzed by quantitative reverse transcription polymerase chain reaction, western blotting, and immunofluorescence. HIF1A-AS2 overexpression enhanced proliferation and motility and reduced apoptosis, increased insulin-like growth factor 2 messenger RNA-binding protein 1 (IGF2BP1), and decreased NLR family pyrin domain containing 3 (NLRP3), gasdermin D (GSDMD) and cleaved caspase-1. Conversely, miR-590-3p suppressed IGF2BP1 and partially reversed HIF1A-AS2-associated phenotypes. Together, these data defined a HIF1A-AS2-miR-590-3p-IGF2BP1 axis linking trophoblast behaviour to inflammatory effector signalling.

缺氧诱导因子1 α反义RNA 2 (HIF1A-AS2)和microRNA-590-3p (miR-590-3p)与炎症和先兆子痫有关。在HTR-8/SVneo细胞中,HIF1A-AS2过表达并引入mir - 5903p模拟物,通过增殖试验、创面愈合和侵袭试验、流式细胞术评估增殖、迁移/侵袭和凋亡,同时通过定量逆转录聚合酶链反应、western blotting和免疫荧光分析分子变化。HIF1A-AS2过表达增强细胞增殖和运动,减少细胞凋亡,增加胰岛素样生长因子2信使rna结合蛋白1 (IGF2BP1),降低NLR家族pyrin domain containing 3 (NLRP3)、gasdermin D (GSDMD)和cleaved caspase-1。相反,miR-590-3p抑制IGF2BP1并部分逆转hif1a - as2相关表型。总之,这些数据定义了HIF1A-AS2-miR-590-3p-IGF2BP1轴,将滋养细胞行为与炎症效应信号传导联系起来。
{"title":"Influence of HIF1A-AS2 and miR-590-3p on trophoblast function and inflammation control in HTR-8/SVneo trophoblast cells.","authors":"Peiqu Zhong, Xiaoping Jia, Qiongfang Chen, Fengmei Tang, Wanying Liang, Youcai Liang, Jiayuan Zhang, Lijian Zhao","doi":"10.1016/j.abb.2026.110738","DOIUrl":"10.1016/j.abb.2026.110738","url":null,"abstract":"<p><p>Hypoxia-inducible factor 1 alpha antisense RNA 2 (HIF1A-AS2) and microRNA-590-3p (miR-590-3p) have been linked to inflammation and preeclampsia. In HTR-8/SVneo cells, HIF1A-AS2 was overexpressed and miR-590-3p mimic was introduced, and proliferation, migration/invasion and apoptosis were assessed by proliferation assays, wound-healing and Matrigel invasion assays, and flow cytometry, while molecular alterations were analyzed by quantitative reverse transcription polymerase chain reaction, western blotting, and immunofluorescence. HIF1A-AS2 overexpression enhanced proliferation and motility and reduced apoptosis, increased insulin-like growth factor 2 messenger RNA-binding protein 1 (IGF2BP1), and decreased NLR family pyrin domain containing 3 (NLRP3), gasdermin D (GSDMD) and cleaved caspase-1. Conversely, miR-590-3p suppressed IGF2BP1 and partially reversed HIF1A-AS2-associated phenotypes. Together, these data defined a HIF1A-AS2-miR-590-3p-IGF2BP1 axis linking trophoblast behaviour to inflammatory effector signalling.</p>","PeriodicalId":8174,"journal":{"name":"Archives of biochemistry and biophysics","volume":" ","pages":"110738"},"PeriodicalIF":3.0,"publicationDate":"2026-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146028318","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
RNA binding motif protein 15 promotes intracerebral hemorrhage progression by regulating mitophagy through E2F transcription factor 1 RNA结合基序蛋白15通过E2F转录因子1调控线粒体自噬促进脑出血进展
IF 3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-20 DOI: 10.1016/j.abb.2026.110746
Jiwei Sun , Ning Li , Yesen Zhang, Jian Song, Yi Han
RNA binding motif protein 15 (RBM15) has been implicated in the progression of various diseases. However, its role in intracerebral hemorrhage (ICH) remains inadequately understood. To investigate RBM15's involvement in ICH, an ICH model was established using HT-22 cells and C57BL/6 mice. Elevated RBM15 expression levels were observed, suggesting its critical role in ICH pathogenesis. Our study further revealed that RBM15 depletion significantly mitigated ICH-induced brain injury and enhanced neurological function. Furthermore, RBM15 was found to mediate the N6-methyladenosine (m6A) methylation of E2F transcription factor 1 (E2F1) mRNA, thereby enhancing its stability. Further analysis confirmed that RBM15 regulates mitophagy via E2F1, with E2F1 overexpression effectively counteracting mitophagy in the absence of RBM15. Collectively, these findings indicate that targeting RBM15 may offer a promising therapeutic strategy for ICH.
RNA结合基序蛋白15 (RBM15)与多种疾病的进展有关。然而,其在脑出血(ICH)中的作用仍不充分了解。为了研究RBM15在脑出血中的作用,我们采用HT-22细胞和C57BL/6小鼠建立脑出血模型。RBM15表达水平升高,提示其在脑出血发病机制中起关键作用。我们的研究进一步表明,RBM15缺失可显著减轻ich诱导的脑损伤并增强神经功能。此外,RBM15被发现介导E2F转录因子1 (E2F1) mRNA的n6 -甲基腺苷(m6A)甲基化,从而增强其稳定性。进一步分析证实,RBM15通过E2F1调控线粒体自噬,在RBM15缺失的情况下,E2F1过表达可有效抵消线粒体自噬。总的来说,这些发现表明靶向RBM15可能为脑出血提供一种有希望的治疗策略。
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引用次数: 0
USP15 promotes proliferation, migration, and apoptosis resistance of pulmonary arterial smooth muscle cells by targeting MDM2 USP15通过靶向MDM2促进肺动脉平滑肌细胞的增殖、迁移和凋亡抵抗。
IF 3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-17 DOI: 10.1016/j.abb.2026.110733
Yanan Qi , Qixing Dong , Ping Luo , Jiaxin Meng , Beiping Guo , Xianglu Zhang , Leining Shan , Minyi Fu , Lizhen Yang , Jun Peng , Bin Liu

Background

Pulmonary vascular remodeling is the core pathological feature of pulmonary arterial hypertension (PAH). This process involves intricate changes in pulmonary arterial smooth muscle cells (PASMC), such as proliferation, migration, and resistance to apoptosis. Recent in-depth research has uncovered that ubiquitination or deubiquitination may play a vital role in pulmonary vascular remodeling by regulating the stability of substrate proteins and nuclear localization. The development of drugs targeting ubiquitination or deubiquitination enzymes may offer new strategies for preventing and treating PAH.

Methods and results

We initially identified deubiquitinase-related genes that were differentially expressed in the lung tissues of PAH patients using the GEO database. These findings were then validated in two classic PAH rat models induced by MCT or SuHx. Our experimental results revealed a significant increase in the expression of USP15 in both models, particularly in the pulmonary vascular smooth muscle layer. Furthermore, we observed that in our PDGF-BB or hypoxia-induced PASMC model studies, the proliferation, migration, and apoptotic resistance of PASMC induced by PDGF-BB or hypoxia were effectively inhibited by USP15 siRNA. Subsequent mechanism studies demonstrated that silencing USP15 prevented the up-regulation of murine double minute 2 (MDM2) in PASMC induced by PDGF-BB or hypoxia. Conversely, the overexpression of USP15 facilitated proliferation, migration, and apoptosis resistance in PASMC, which was associated with the increased expression of MDM2.

Conclusions

USP15 may facilitate the proliferation, migration, and apoptosis resistance of PASMC by targeting MDM2 expression and ultimately participating in pulmonary vascular remodeling. Therefore, the USP15/MDM2 pathway could be a potential therapeutic target for preventing pulmonary vascular remodeling.
背景:肺血管重构是肺动脉高压(PAH)的核心病理特征。这一过程涉及肺动脉平滑肌细胞(PASMC)的复杂变化,如增殖、迁移和对凋亡的抵抗。近年来的深入研究发现,泛素化或去泛素化可能通过调节底物蛋白的稳定性和核定位在肺血管重构中发挥重要作用。靶向泛素化或去泛素化酶的药物的开发可能为预防和治疗PAH提供新的策略。方法和结果:我们最初使用GEO数据库确定了PAH患者肺组织中差异表达的去泛素酶相关基因。这些发现随后在MCT或SuHx诱导的两种经典PAH大鼠模型中得到验证。我们的实验结果显示,两种模型中USP15的表达均显著增加,尤其是在肺血管平滑肌层。此外,在PDGF-BB或缺氧诱导的PASMC模型研究中,我们观察到PDGF-BB或缺氧诱导的PASMC的增殖、迁移和凋亡抵抗均被USP15 siRNA有效抑制。随后的机制研究表明,沉默USP15可阻止PDGF-BB或缺氧诱导的PASMC中小鼠双分钟2 (MDM2)的上调。相反,USP15的过表达促进了PASMC的增殖、迁移和细胞凋亡抵抗,这与MDM2的表达增加有关。结论:USP15可能通过靶向MDM2表达促进PASMC的增殖、迁移和抗凋亡,最终参与肺血管重构。因此,USP15/MDM2通路可能是预防肺血管重构的潜在治疗靶点。
{"title":"USP15 promotes proliferation, migration, and apoptosis resistance of pulmonary arterial smooth muscle cells by targeting MDM2","authors":"Yanan Qi ,&nbsp;Qixing Dong ,&nbsp;Ping Luo ,&nbsp;Jiaxin Meng ,&nbsp;Beiping Guo ,&nbsp;Xianglu Zhang ,&nbsp;Leining Shan ,&nbsp;Minyi Fu ,&nbsp;Lizhen Yang ,&nbsp;Jun Peng ,&nbsp;Bin Liu","doi":"10.1016/j.abb.2026.110733","DOIUrl":"10.1016/j.abb.2026.110733","url":null,"abstract":"<div><h3>Background</h3><div>Pulmonary vascular remodeling is the core pathological feature of pulmonary arterial hypertension (PAH). This process involves intricate changes in pulmonary arterial smooth muscle cells (PASMC), such as proliferation, migration, and resistance to apoptosis. Recent in-depth research has uncovered that ubiquitination or deubiquitination may play a vital role in pulmonary vascular remodeling by regulating the stability of substrate proteins and nuclear localization. The development of drugs targeting ubiquitination or deubiquitination enzymes may offer new strategies for preventing and treating PAH.</div></div><div><h3>Methods and results</h3><div>We initially identified deubiquitinase-related genes that were differentially expressed in the lung tissues of PAH patients using the GEO database. These findings were then validated in two classic PAH rat models induced by MCT or SuHx. Our experimental results revealed a significant increase in the expression of USP15 in both models, particularly in the pulmonary vascular smooth muscle layer. Furthermore, we observed that in our PDGF-BB or hypoxia-induced PASMC model studies, the proliferation, migration, and apoptotic resistance of PASMC induced by PDGF-BB or hypoxia were effectively inhibited by USP15 siRNA. Subsequent mechanism studies demonstrated that silencing USP15 prevented the up-regulation of murine double minute 2 (MDM2) in PASMC induced by PDGF-BB or hypoxia. Conversely, the overexpression of USP15 facilitated proliferation, migration, and apoptosis resistance in PASMC, which was associated with the increased expression of MDM2.</div></div><div><h3>Conclusions</h3><div>USP15 may facilitate the proliferation, migration, and apoptosis resistance of PASMC by targeting MDM2 expression and ultimately participating in pulmonary vascular remodeling. Therefore, the USP15/MDM2 pathway could be a potential therapeutic target for preventing pulmonary vascular remodeling.</div></div>","PeriodicalId":8174,"journal":{"name":"Archives of biochemistry and biophysics","volume":"778 ","pages":"Article 110733"},"PeriodicalIF":3.0,"publicationDate":"2026-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146002932","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The regulation of CP-31398 on liquid-liquid phase separation of p53 CP-31398对p53液-液分离的调控作用
IF 3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-16 DOI: 10.1016/j.abb.2026.110735
Yang Liu , Chang Xu , Fangming Jiang , Xiaorong Yang
The tumor suppressor p53 could regulate the cell cycle arrest, DNA repair and apoptosis. It underwent liquid-liquid phase separation (LLPS) to form droplets. CP-31398 was thought as the activator of p53. In this work, the regulation of CP-31398 on the LLPS of p53 was investigated. The results revealed that CP-31398 promoted the LLPS of p53, delayed the solidification of p53 droplets and increased the mobility of p53 droplets. It also enhanced the tolerance of p53 droplets to the negative charges, and improved the phase behavior of heterotypic p53-pol II CTD droplets. The p53-CP-31398 droplets were driven by hydrogen bonds, hydrophobic and electrostatic interactions. These findings clarified that CP-31398 could elevate the transcriptional function of p53 probably by modulating the phase behavior. The study provided new insights into the regulation mechanism of p53 and potential therapeutic avenues for cancer.
肿瘤抑制因子p53可调控细胞周期阻滞、DNA修复和细胞凋亡。经液液相分离(LLPS)形成液滴。CP-31398被认为是p53的激活剂。本研究探讨了CP-31398对p53 LLPS的调控作用。结果表明,CP-31398促进了p53的LLPS,延缓了p53液滴的凝固,增加了p53液滴的迁移率。增强了p53液滴对负电荷的耐受性,改善了异型p53-pol II CTD液滴的相行为。p53-CP-31398液滴由氢键、疏水和静电相互作用驱动。这些发现表明,CP-31398可能通过调控相行为来提高p53的转录功能。该研究为p53的调控机制和潜在的癌症治疗途径提供了新的见解。
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引用次数: 0
Systems analysis of the kinetics of in vitro transcription from interactions of T7 RNA polymerase and DNA T7 RNA聚合酶与DNA相互作用的体外转录动力学系统分析。
IF 3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-16 DOI: 10.1016/j.abb.2026.110737
Nathan M. Stover , Marieke De Bock , Julie Chen, Jacob Rosenfeld, Maria del Carme Pons Royo, Allan S. Myerson, Richard D. Braatz
The in vitro transcription reaction (IVT) is of growing importance for the manufacture of RNA vaccines and therapeutics. While the kinetics of the microscopic steps of this reaction (promoter binding, initiation, and elongation) are well studied, the rate law of overall RNA synthesis that emerges from this system is unclear. In this work, we show that a model that incorporates both initiation and elongation steps is essential for describing trends in IVT kinetics in conditions relevant to RNA manufacturing. In contrast to previous reports, we find that the IVT reaction can be either initiation- or elongation-limited depending on solution conditions. This initiation-elongation model is also essential for describing the effect of salts, which disrupt polymerase-promoter binding, on transcription rates. Polymerase-polymerase interactions during elongation are incorporated into our modeling framework and found to have nonzero but unidentifiable effects on macroscopic transcription rates. Finally, we develop an extension of our modeling approach to quantitatively describe and experimentally evaluate RNA- and DNA-templated mechanisms for the formation of double-stranded RNA (dsRNA) impurities.
体外转录反应(IVT)在RNA疫苗和治疗药物的生产中越来越重要。虽然该反应的微观步骤(启动子结合、起始和延伸)的动力学已经得到了很好的研究,但从该系统中产生的整个RNA合成的速率规律尚不清楚。在这项工作中,我们证明了一个包含起始和延伸步骤的模型对于描述与RNA制造相关条件下IVT动力学的趋势是必不可少的。与以前的报道相反,我们发现IVT反应可以是引发或延伸限制取决于溶液条件。这种起始-延伸模型对于描述破坏聚合酶启动子结合的盐对转录率的影响也是必不可少的。延伸期间的聚合酶-聚合酶相互作用被纳入我们的建模框架,并发现对宏观转录率有非零但无法识别的影响。最后,我们开发了我们的建模方法的扩展,以定量描述和实验评估RNA和dna模板形成双链RNA (dsRNA)杂质的机制。
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引用次数: 0
Structural and biochemical characterization of a GH5_22 enzyme from the seaweed-derived thermophile Geobacillus thermodenitrificans OS27 海藻源嗜热反硝化地杆菌OS27中GH5_22酶的结构和生化表征
IF 3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-16 DOI: 10.1016/j.abb.2026.110736
Wonkyu Lee , Tomoya Hino , Kenta Fujii , Sugue Tanimoto , Reno Naka , Koya Hara , Takaki Okamoto , Fumiyoshi Okazaki , Shingo Nagano , Takashi Ohshiro , Hirokazu Suzuki
Geobacillus thermodenitrificans OS27 is a seaweed-derived thermophile that harbors a GH5_22 gene (bxlA) that encodes for a glycoside hydrolase fused with the cyclin box domain. In this study, we characterized the catalytic activity, enzymatic properties, three-dimensional structure, and physiological role of the gene product, GtBxlA. The enzyme was produced as a thermostable dimer, acting on p-nitrophenyl-β-d-xylopyranoside among 23 substrates. β-1,4-Linked xylooligosaccharides were also hydrolyzed from the nonreducing end. The activity indicated that GtBxlA functions as an exo-β-1,4-xylosidase. We determined the crystal structure of the Glu188Ala variant complexed with β-1,4-xylotriose at 1.52 Å resolution. GtBxlA exhibited an atypical (β/α)8-barrel architecture. The cyclin box constituted a single α-helix within the core barrel and a lid-like domain that contributes to dimer formation. Structural analysis revealed that Glu188 and Glu318 are positioned to serve as the acid/base and nucleophile catalysts, respectively. Alanine mutagenesis confirmed the essential role of Glu188 and Glu318 in catalysis. We also determined the ligand-free structure of the Glu188Ala variant. Both structures were almost identical; however, a loop at the substrate entry site was fixed in the ligand-free structure, suggesting a conformational change upon substrate binding. Although bxlA deletion did not affect β-1,4-xylan utilization, its expression was induced by β-1,4-xylan. These observations suggest that G. thermodenitrificans OS27 employed GtBxlA in utilizing β-1,4-xylan. Notably, GtBxlA could hydrolyze β-1,3-linked xylooligosaccharides. This highlights the possibility that GtBxlA also assists the host in utilizing β-1,3-xylan, which is abundant in certain seaweeds.
Geobacillus thermodenitrificans OS27是一种源自海藻的嗜热菌,其含有GH5_22基因(bxlA),该基因编码与细胞周期蛋白盒结构域融合的糖苷水解酶。在这项研究中,我们表征了基因产物GtBxlA的催化活性、酶学性质、三维结构和生理作用。该酶是一种耐热二聚体,在23种底物中作用于对硝基苯-β-d-木吡喃苷。β-1,4-连接的低聚木糖也从非还原端水解。活性表明GtBxlA具有外显β-1,4-木糖苷酶的功能。我们在1.52 Å分辨率下确定了Glu188Ala变体与β-1,4-木糖三糖络合的晶体结构。GtBxlA呈现非典型的(β/α)8桶结构。周期蛋白盒在核心筒内由单个α-螺旋和一个有助于二聚体形成的盖子状结构域组成。结构分析表明,Glu188和Glu318分别被定位为酸/碱和亲核催化剂。丙氨酸诱变证实了Glu188和Glu318在催化中的重要作用。我们还确定了Glu188Ala变体的无配体结构。两种结构几乎完全相同;然而,底物进入位点的环固定在无配体结构中,表明底物结合后构象发生了变化。虽然bxlA缺失不影响β-1,4-木聚糖的利用,但它的表达受到β-1,4-木聚糖的诱导。这些结果表明,G. thermodenaficans OS27利用GtBxlA利用β-1,4-木聚糖。值得注意的是,GtBxlA可以水解β-1,3-连接的低聚木糖。这突出了GtBxlA也可能帮助宿主利用β-1,3-木聚糖,β-1,3-木聚糖在某些海藻中丰富。
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Archives of biochemistry and biophysics
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