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Acknowledgment to Reviewers of Antibodies in 2020 2020年抗体评审员致谢
IF 4.7 Q3 IMMUNOLOGY Pub Date : 2021-01-25 DOI: 10.3390/antib10010005
Antibodies Editorial Office
Peer review is the driving force of journal development, and reviewers are gatekeepers who ensure that Antibodies maintains its standards for the high quality of its published papers [...].
同行评议是期刊发展的推动力,审稿人是确保《抗体》保持其高质量发表论文标准的看门人[…]。
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引用次数: 0
Crystal Structure and Characterization of Human Heavy-Chain Only Antibodies Reveals a Novel, Stable Dimeric Structure Similar to Monoclonal Antibodies 人纯重链抗体的晶体结构和表征揭示了一种类似于单克隆抗体的新型稳定二聚体结构
IF 4.7 Q3 IMMUNOLOGY Pub Date : 2020-11-22 DOI: 10.2210/pdb7kqy/pdb
C. Mieczkowski, Soheila Bahmanjah, Yao Yu, J. Baker, G. Raghunathan, D. Tomazela, Mark Hsieh, M. Mccoy, C. Strickland, Laurence Fayadat-Dilman
We report the novel crystal structure and characterization of symmetrical, homodimeric humanized heavy-chain-only antibodies or dimers (HC2s). HC2s were found to be significantly coexpressed and secreted along with mAbs from transient CHO HC/LC cotransfection, resulting in an unacceptable mAb developability attribute. Expression of full-length HC2s in the absence of LC followed by purification resulted in HC2s with high purity and thermal stability similar to conventional mAbs. The VH and CH1 portion of the heavy chain (or Fd) was also efficiently expressed and yielded a stable, covalent, and reducible dimer (Fd2). Mutagenesis of all heavy chain cysteines involved in disulfide bond formation revealed that Fd2 intermolecular disulfide formation was similar to Fabs and elucidated requirements for Fd2 folding and expression. For one HC2, we solved the crystal structure of the Fd2 domain to 2.9 Å, revealing a highly symmetrical homodimer that is structurally similar to Fabs and is mediated by conserved (CH1) and variable (VH) contacts with all CDRs positioned outward for target binding. Interfacial dimer contacts revealed by the crystal structure were mutated for two HC2s and were found to dramatically affect HC2 formation while maintaining mAb bioactivity, offering a potential means to modulate novel HC2 formation through engineering. These findings indicate that human heavy-chain dimers can be secreted efficiently in the absence of light chains, may show good physicochemical properties and stability, are structurally similar to Fabs, offer insights into their mechanism of formation, and may be amenable as a novel therapeutic modality.
我们报道了对称的、同源二聚体的人源化仅重链抗体或二聚体(HC2s)的新晶体结构和表征。发现HC2s与瞬时CHO-HC/LC共转染的mAb显著共表达和分泌,导致了不可接受的mAb可开发性。在没有LC的情况下表达全长HC2s,然后进行纯化,得到具有类似于传统mAb的高纯度和热稳定性的HC2s。重链(或Fd)的VH和CH1部分也被有效表达,并产生稳定、共价和可还原的二聚体(Fd2)。参与二硫键形成的所有重链半胱氨酸的突变显示Fd2分子间二硫键的形成与Fabs相似,并阐明了Fd2折叠和表达的要求。对于一个HC2,我们将Fd2结构域的晶体结构解析为2.9Å,揭示了一种高度对称的同源二聚体,其结构与Fabs相似,并由保守(CH1)和可变(VH)接触介导,所有CDR位于外侧以进行靶结合。通过晶体结构揭示的界面二聚体接触被突变为两个HC2,并被发现在保持mAb生物活性的同时显著影响HC2的形成,为通过工程调节新的HC2形成提供了一种潜在的手段。这些发现表明,人类重链二聚体在没有轻链的情况下可以有效分泌,可能表现出良好的物理化学性质和稳定性,结构类似于Fabs,提供了对其形成机制的深入了解,并可能成为一种新的治疗方式。
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引用次数: 2
Acknowledgement to Reviewers of Antibodies in 2019 2019年抗体评审员致谢
IF 4.7 Q3 IMMUNOLOGY Pub Date : 2020-01-30 DOI: 10.3390/antib9010003
Antibodies Editorial Office
The editorial team greatly appreciates the reviewers who have dedicated their considerable time andexpertise to the journal's rigorous editorial process over the past 12 months[...].
编辑团队非常感谢在过去12个月里为该杂志严格的编辑过程投入了大量时间和专业知识的审稿人[…]。
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引用次数: 1
Understanding Inter-Individual Variability in Monoclonal Antibody Disposition 了解单克隆抗体配置的个体间变异性
IF 4.7 Q3 IMMUNOLOGY Pub Date : 2019-12-01 DOI: 10.3390/antib8040056
Veena A. Thomas, J. Balthasar
Monoclonal antibodies (mAbs) are currently the largest and most dominant class of therapeutic proteins. Inter-individual variability has been observed for several mAbs; however, an understanding of the underlying mechanisms and factors contributing to inter-subject differences in mAb disposition is still lacking. In this review, we analyze the mechanisms of antibody disposition and the putative mechanistic determinants of inter-individual variability. Results from in vitro, preclinical, and clinical studies were reviewed evaluate the role of the neonatal Fc receptor and Fc gamma receptors (expression and polymorphism), target properties (expression, shedding, turnover, internalization, heterogeneity, polymorphism), and the influence of anti-drug antibodies. Particular attention is given to the influence of co-administered drugs and disease, and to the physiological relevance of covariates identified by population pharmacokinetic modeling, as determinants of variability in mAb pharmacokinetics.
单克隆抗体(mAbs)是目前最大、最具优势的一类治疗蛋白。已经观察到几种mAb的个体间变异性;然而,对导致mAb处置受试者间差异的潜在机制和因素仍缺乏了解。在这篇综述中,我们分析了抗体处置的机制和个体间变异的假定机制决定因素。综述了体外、临床前和临床研究的结果,评估了新生儿Fc受体和Fcγ受体的作用(表达和多态性)、靶点特性(表达、脱落、周转、内化、异质性、多态性)以及抗药物抗体的影响。特别注意共同给药药物和疾病的影响,以及通过群体药代动力学建模确定的协变量的生理相关性,作为mAb药代动力学变异的决定因素。
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引用次数: 43
IgA: Structure, Function, and Developability IgA:结构、功能和可开发性
IF 4.7 Q3 IMMUNOLOGY Pub Date : 2019-12-01 DOI: 10.3390/antib8040057
Patrícia de Sousa-Pereira, J. Woof
Immunoglobulin A (IgA) plays a key role in defending mucosal surfaces against attack by infectious microorganisms. Such sites present a major site of susceptibility due to their vast surface area and their constant exposure to ingested and inhaled material. The importance of IgA to effective immune defence is signalled by the fact that more IgA is produced than all the other immunoglobulin classes combined. Indeed, IgA is not just the most prevalent antibody class at mucosal sites, but is also present at significant concentrations in serum. The unique structural features of the IgA heavy chain allow IgA to polymerise, resulting in mainly dimeric forms, along with some higher polymers, in secretions. Both serum IgA, which is principally monomeric, and secretory forms of IgA are capable of neutralising and removing pathogens through a range of mechanisms, including triggering the IgA Fc receptor known as FcαRI or CD89 on phagocytes. The effectiveness of these elimination processes is highlighted by the fact that various pathogens have evolved mechanisms to thwart such IgA-mediated clearance. As the structure–function relationships governing the varied capabilities of this immunoglobulin class come into increasingly clear focus, and means to circumvent any inherent limitations are developed, IgA-based monoclonal antibodies are set to emerge as new and potent options in the therapeutic arena.
免疫球蛋白A(IgA)在保护粘膜表面免受感染微生物攻击方面发挥着关键作用。这些部位由于其巨大的表面积和持续暴露于摄入和吸入的物质而成为主要的易感部位。IgA对有效免疫防御的重要性体现在产生的IgA比所有其他免疫球蛋白类别的总和都多。事实上,IgA不仅是粘膜部位最常见的抗体类别,而且在血清中也以显著浓度存在。IgA重链的独特结构特征使IgA能够聚合,在分泌物中主要形成二聚体形式,以及一些高级聚合物。血清IgA(主要是单体的)和分泌型IgA都能够通过一系列机制中和和清除病原体,包括触发吞噬细胞上被称为FcαRI或CD89的IgA-Fc受体。各种病原体已经进化出阻止这种IgA介导的清除的机制,这突出了这些清除过程的有效性。随着控制这类免疫球蛋白不同能力的结构-功能关系越来越受到关注,以及规避任何固有限制的方法的发展,基于IgA的单克隆抗体将成为治疗领域的新的有效选择。
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引用次数: 99
Antibody Structure and Function: The Basis for Engineering Therapeutics 抗体的结构和功能:工程治疗的基础
IF 4.7 Q3 IMMUNOLOGY Pub Date : 2019-12-01 DOI: 10.3390/antib8040055
M. Chiu, Dennis R. Goulet, A. Teplyakov, G. Gilliland
Antibodies and antibody-derived macromolecules have established themselves as the mainstay in protein-based therapeutic molecules (biologics). Our knowledge of the structure–function relationships of antibodies provides a platform for protein engineering that has been exploited to generate a wide range of biologics for a host of therapeutic indications. In this review, our basic understanding of the antibody structure is described along with how that knowledge has leveraged the engineering of antibody and antibody-related therapeutics having the appropriate antigen affinity, effector function, and biophysical properties. The platforms examined include the development of antibodies, antibody fragments, bispecific antibody, and antibody fusion products, whose efficacy and manufacturability can be improved via humanization, affinity modulation, and stability enhancement. We also review the design and selection of binding arms, and avidity modulation. Different strategies of preparing bispecific and multispecific molecules for an array of therapeutic applications are included.
抗体和抗体衍生的大分子已经成为基于蛋白质的治疗分子(生物制剂)的支柱。我们对抗体结构-功能关系的了解为蛋白质工程提供了一个平台,该平台已被用于生产用于多种治疗适应症的广泛生物制剂。在这篇综述中,我们对抗体结构的基本理解以及这些知识如何利用具有适当抗原亲和力,效应功能和生物物理特性的抗体和抗体相关疗法的工程。研究平台包括抗体、抗体片段、双特异性抗体和抗体融合产品的开发,这些产品的功效和可制造性可以通过人源化、亲和力调节和稳定性增强来提高。我们还回顾了结合臂的设计和选择,以及贪婪调节。不同的策略制备双特异性和多特异性分子的阵列治疗应用包括在内。
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引用次数: 231
Antibody-Drug Conjugates Targeting the Urokinase Receptor (uPAR) as a Possible Treatment of Aggressive Breast Cancer 靶向尿激酶受体(uPAR)的抗体-药物偶联物可能治疗侵袭性乳腺癌症
IF 4.7 Q3 IMMUNOLOGY Pub Date : 2019-11-05 DOI: 10.3390/antib8040054
E. Harel, Penelope M. Drake, Robyn M. Barfield, Irene Lui, S. Farr-Jones, L. V. van’t Veer, Zev J. Gartner, E. Green, André L. Lourenço, Yifan Cheng, B. Hann, David Rabuka, C. Craik
A promising molecular target for aggressive cancers is the urokinase receptor (uPAR). A fully human, recombinant antibody that binds uPAR to form a stable complex that blocks uPA-uPAR interactions (2G10) and is internalized primarily through endocytosis showed efficacy in a mouse xenograft model of highly aggressive, triple negative breast cancer (TNBC). Antibody-drug conjugates (ADCs) of 2G10 were designed and produced bearing tubulin inhibitor payloads ligated through seven different linkers. Aldehyde tag technology was employed for linking, and either one or two tags were inserted into the antibody heavy chain, to produce site-specifically conjugated ADCs with drug-to-antibody ratios of either two or four. Both cleavable and non-cleavable linkers were combined with two different antimitotic toxins—MMAE (monomethylauristatin E) and maytansine. Nine different 2G10 ADCs were produced and tested for their ability to target uPAR in cell-based assays and a mouse model. The anti-uPAR ADC that resulted in tumor regression comprised an MMAE payload with a cathepsin B cleavable linker, 2G10-RED-244-MMAE. This work demonstrates in vitro activity of the 2G10-RED-244-MMAE in TNBC cell lines and validates uPAR as a therapeutic target for TNBC.
尿激酶受体(uPAR)是治疗侵袭性癌症的一个很有前景的分子靶点。一种完全人源的重组抗体结合uPAR形成稳定复合物,阻断uPA-uPAR相互作用(2G10),并主要通过内吞作用内化,在高侵袭性三阴性乳腺癌(TNBC)小鼠异种移植模型中显示出疗效。设计并制备了2G10的抗体-药物偶联物(adc),通过7种不同的连接物连接微管蛋白抑制剂有效载荷。采用醛标签技术进行连接,将一个或两个标签插入抗体重链中,得到药抗比为2或4的位点特异性偶联adc。可切割和不可切割的连接体都与两种不同的抗有丝分裂毒素mmae(单甲基月桂化酶E)和美塔辛结合。生产了9种不同的2G10 adc,并在基于细胞的测定和小鼠模型中测试了它们靶向uPAR的能力。导致肿瘤消退的抗upar ADC包括一个带有组织蛋白酶B可切割连接体2G10-RED-244-MMAE的MMAE有效载荷。这项工作证明了2G10-RED-244-MMAE在TNBC细胞系中的体外活性,并验证了uPAR作为TNBC的治疗靶点。
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引用次数: 13
Engineering a Novel Antibody-Peptide Bispecific Fusion Protein Against MERS-CoV 构建新型抗MERS-CoV抗体肽双特异性融合蛋白
IF 4.7 Q3 IMMUNOLOGY Pub Date : 2019-11-04 DOI: 10.3390/antib8040053
Lili Wang, J. Xu, Yu Kong, Ruiying Liang, Wei Li, Jinyao Li, Jun Lu, D. Dimitrov, F. Yu, Yanling Wu, T. Ying
In recent years, tremendous efforts have been made in the engineering of bispecific or multi-specific antibody-based therapeutics by combining two or more functional antigen-recognizing elements into a single construct. However, to the best of our knowledge there has been no reported cases of effective antiviral antibody-peptide bispecific fusion proteins. We previously developed potent fully human monoclonal antibodies and inhibitory peptides against Middle East Respiratory Syndrome Coronavirus (MERS-CoV), a novel coronavirus that causes severe acute respiratory illness with high mortality. Here, we describe the generation of antibody-peptide bispecific fusion proteins, each of which contains an anti-MERS-CoV single-chain antibody m336 (or normal human IgG1 CH3 domain as a control) linked with, or without, a MERS-CoV fusion inhibitory peptide HR2P. We found that one of these fusion proteins, designated as m336 diabody-pep, exhibited more potent inhibitory activity than the antibody or the peptide alone against pseudotyped MERS-CoV infection and MERS-CoV S protein-mediated cell-cell fusion, suggesting its potential to be developed as an effective bispecific immunotherapeutic for clinical use.
近年来,通过将两个或多个功能性抗原识别元件组合成一个单一结构,在双特异性或多特异性抗体治疗工程方面取得了巨大的进展。然而,据我们所知,还没有报道有效的抗病毒抗体-肽双特异性融合蛋白的病例。我们之前开发了针对中东呼吸综合征冠状病毒(MERS-CoV)的强效全人源单克隆抗体和抑制肽,MERS-CoV是一种导致严重急性呼吸道疾病且死亡率高的新型冠状病毒。在这里,我们描述了抗体-肽双特异性融合蛋白的产生,每个蛋白都含有抗MERS-CoV单链抗体m336(或正常人IgG1 CH3结构域作为对照),与MERS-CoV融合抑制肽HR2P连接或不连接。我们发现其中一种融合蛋白m336 diabody-pep比单独的抗体或肽对假型MERS-CoV感染和MERS-CoV S蛋白介导的细胞-细胞融合表现出更强的抑制活性,这表明它有潜力开发成一种有效的双特异性免疫治疗药物用于临床。
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引用次数: 10
Immunoglobulin for Treating Bacterial Infections: One More Mechanism of Action 免疫球蛋白治疗细菌感染的又一作用机制
IF 4.7 Q3 IMMUNOLOGY Pub Date : 2019-11-03 DOI: 10.3390/antib8040052
T. Sawa, M. Kinoshita, Keita Inoue, Junya Ohara, Kiyoshi Moriyama
The mechanisms underlying the effects of immunoglobulins on bacterial infections are thought to involve bacterial cell lysis via complement activation, phagocytosis via bacterial opsonization, toxin neutralization, and antibody-dependent cell-mediated cytotoxicity. Nevertheless, recent advances in the study of the pathogenicity of Gram-negative bacteria have raised the possibility of an association between immunoglobulin and bacterial toxin secretion. Over time, new toxin secretion systems like the type III secretion system have been discovered in many pathogenic Gram-negative bacteria. With this system, the bacterial toxins are directly injected into the cytoplasm of the target cell through a special secretory apparatus without any exposure to the extracellular environment, and therefore with no opportunity for antibodies to neutralize the toxin. However, antibodies against the V-antigen, which is located on the needle-shaped tip of the bacterial secretion apparatus, can inhibit toxin translocation, thus raising the hope that the toxin may be susceptible to antibody targeting. Because multi-drug resistant bacteria are now prevalent, inhibiting this secretion mechanism is an attractive alternative or adjunctive therapy against lethal bacterial infections. Thus, it is not unreasonable to define the blocking effect of anti-V-antigen antibodies as the fifth mechanism for immunoglobulin action against bacterial infections.
免疫球蛋白对细菌感染的作用机制被认为涉及通过补体激活的细菌细胞裂解、通过细菌调理的吞噬作用、毒素中和和抗体依赖性细胞介导的细胞毒性。然而,革兰氏阴性菌致病性研究的最新进展提高了免疫球蛋白与细菌毒素分泌之间联系的可能性。随着时间的推移,在许多致病性革兰氏阴性菌中发现了新的毒素分泌系统,如III型分泌系统。利用该系统,细菌毒素通过特殊的分泌装置直接注射到靶细胞的细胞质中,而不暴露于细胞外环境,因此抗体没有机会中和毒素。然而,位于细菌分泌装置针状尖端的针对V抗原的抗体可以抑制毒素易位,从而提高了毒素可能对抗体靶向敏感的希望。由于耐多药细菌现在很普遍,抑制这种分泌机制是对抗致命细菌感染的一种有吸引力的替代或辅助疗法。因此,将抗V抗原抗体的阻断作用定义为免疫球蛋白对抗细菌感染的第五种机制并非没有道理。
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引用次数: 17
NR4A Expression by Human Marginal Zone B-Cells NR4A在人边缘区b细胞中的表达
IF 4.7 Q3 IMMUNOLOGY Pub Date : 2019-10-11 DOI: 10.3390/antib8040050
Kim Doyon-Laliberté, Josiane Chagnon-Choquet, M. Byrns, M. Aranguren, M. Memmi, P. Chrobak, J. Stagg, J. Poudrier, M. Roger
We have previously characterized a human blood CD19+CD1c+IgM+CD27+CD21loCD10+ innate-like B-cell population, which presents features shared by both transitional immature and marginal zone (MZ) B-cells, named herein “precursor-like” MZ B-cells. B-cells with similar attributes have been associated with regulatory potential (Breg). In order to clarify this issue and better characterize this population, we have proceeded to RNA-Seq transcriptome profiling of mature MZ and precursor-like MZ B-cells taken from the blood of healthy donors. We report that ex vivo mature MZ and precursor-like MZ B-cells express transcripts for the immunoregulatory marker CD83 and nuclear receptors NR4A1, 2, and 3, known to be associated with T-cell regulatory (Treg) maintenance and function. Breg associated markers such as CD39 and CD73 were also expressed by both populations. We also show that human blood and tonsillar precursor-like MZ B-cells were the main B-cell population to express elevated levels of CD83 and NR4A1-3 proteins ex vivo and without stimulation. Sorted tonsillar precursor-like MZ B-cells exerted regulatory activity on autologous activated CD4+ T-cells, and this was affected by a CD83 blocking reagent. We believe these observations shed light on the Breg potential of MZ populations, and identify NR4A1-3 as potential Breg markers, which as for Tregs, may be involved in stabilization of a regulatory status. Since expression and activity of these molecules can be modulated therapeutically, our findings may be useful in strategies aiming at modulation of Breg responses.
我们之前已经鉴定了人类血液CD19+CD1c+IgM+CD27+CD21loCD10+先天性样B细胞群的特征,其具有过渡未成熟和边缘区(MZ)B细胞共有的特征,本文称为“前体样”MZ B细胞。具有相似属性的B细胞与调节潜力(Breg)有关。为了澄清这个问题并更好地描述这个群体,我们对从健康捐献者的血液中提取的成熟MZ和前体样MZ B细胞进行了RNA-Seq转录组分析。我们报道,离体成熟MZ和前体样MZ B细胞表达免疫调节标记物CD83和核受体NR4A1、2和3的转录物,已知与T细胞调节(Treg)维持和功能有关。Breg相关标记物如CD39和CD73也在两个群体中表达。我们还表明,人类血液和扁桃体前体样MZ B细胞是在体外和无刺激的情况下表达CD83和NR4A1-3蛋白水平升高的主要B细胞群体。分选的扁桃体前体样MZ B细胞对自体活化的CD4+T细胞具有调节活性,这受到CD83阻断试剂的影响。我们相信,这些观察结果揭示了MZ群体的Breg潜力,并将NR4A1-3确定为潜在的Breg标记,对于Tregs,这可能与调节状态的稳定有关。由于这些分子的表达和活性可以通过治疗进行调节,我们的发现可能对旨在调节Breg反应的策略有用。
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引用次数: 8
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Antibodies
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