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Natural Selection Across Three Generations of Americans. 跨越三代美国人的自然选择。
IF 2.6 4区 医学 Q2 BEHAVIORAL SCIENCES Pub Date : 2024-09-01 Epub Date: 2024-07-11 DOI: 10.1007/s10519-024-10189-8
David Hugh-Jones, Tobias Edwards

We investigate natural selection on polygenic scores in the contemporary US, using the Health and Retirement Study. Across three generations, scores which correlate negatively (positively) with education are selected for (against). However, results only partially support the economic theory of fertility as an explanation for natural selection. The theory predicts that selection coefficients should be stronger among low-income, less educated, unmarried and younger parents, but these predictions are only half borne out: coefficients are larger only among low-income parents and unmarried parents. We also estimate effect sizes corrected for noise in the polygenic scores. Selection for some health traits is similar in magnitude to that for cognitive traits.

我们利用 "健康与退休研究"(Health and Retirement Study)调查了当代美国多基因分数的自然选择。在三代人中,与教育呈负相关(正相关)的分数被选择(反对)。然而,结果仅部分支持生育率经济理论对自然选择的解释。根据该理论的预测,低收入、受教育程度较低、未婚和年轻父母的选择系数应该更大,但这些预测只得到了一半的证实:只有低收入父母和未婚父母的系数更大。我们还估算了修正多基因评分噪声后的效应大小。某些健康特征的选择程度与认知特征的选择程度相似。
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引用次数: 0
Non-Synonymous Substitutions in Cadherin 13, Solute Carrier Family 6 Member 4, and Monoamine Oxidase A Genes are Associated with Personality Traits in Thoroughbred Horses. Cadherin 13、溶质运载家族 6 成员 4 和单胺氧化酶 A 基因的非同义替换与纯血马的性格特征有关。
IF 2.6 4区 医学 Q2 BEHAVIORAL SCIENCES Pub Date : 2024-07-01 Epub Date: 2024-06-10 DOI: 10.1007/s10519-024-10186-x
Tamu Yokomori, Teruaki Tozaki, Aoi Ohnuma, Mutsuki Ishimaru, Fumio Sato, Yusuke Hori, Takao Segawa, Takuya Itou

Retraining retired racehorses for various purposes can help correct behavioral issues. However, ensuring efficiency and preventing accidents present global challenges. Based on the hypothesis that a simple personality assessment could help address these challenges, the present study aimed to identify genetic markers associated with personality. Eight genes were selected from 18 personality-related candidate genes that are orthologs of human personality genes, and their association with personality was verified based on actual behavior. A total of 169 Thoroughbred horses were assessed for their tractability (questionnaire concerning tractability in 14 types of situations and 3 types of impressions) during the training process. Personality factors were extracted from the data using principal component analysis and analyzed for their association with single nucleotide variants as non-synonymous substitutions in the target genes. Three genes, CDH13, SLC6A4, and MAOA, demonstrated significant associations based on simple linear regression, marking the identification of these genes for the first time as contributors to temperament in Thoroughbred horses. All these genes, as well as the previously identified HTR1A, are involved in the serotonin neurotransmitter system, suggesting that the tractability of horses may be correlated with their social personality. Assessing the genotypes of these genes before retraining is expected to prevent problems in the development of a racehorse's second career and shorten the training period through individual customization of training methods, thereby improving racehorse welfare.

对退役赛马进行各种目的的再训练有助于纠正其行为问题。然而,确保效率和防止意外事故是一项全球性挑战。基于简单的性格评估有助于应对这些挑战的假设,本研究旨在确定与性格相关的遗传标记。研究人员从 18 个与性格相关的候选基因中选出了 8 个与人类性格基因同源的基因,并根据实际行为验证了这些基因与性格的关联性。共对169匹纯血马在训练过程中的牵引力进行了评估(关于在14种情况和3种印象下的牵引力的问卷调查)。使用主成分分析法从数据中提取性格因素,并分析其与目标基因中作为非同义替换的单核苷酸变异的关联。根据简单的线性回归,CDH13、SLC6A4 和 MAOA 这三个基因表现出了显著的关联性,这标志着这些基因首次被确定为纯血马气质的影响因素。所有这些基因以及之前发现的 HTR1A 都与血清素神经递质系统有关,这表明马的温顺性可能与它们的社会性格有关。在重新训练前对这些基因的基因型进行评估,有望避免赛马第二职业发展过程中出现问题,并通过个性化的训练方法缩短训练时间,从而提高赛马的福利。
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引用次数: 0
A Note on Modelling Bidirectional Feedback Loops in Mendelian Randomization Studies. 孟德尔随机化研究中的双向反馈回路建模说明。
IF 2.6 4区 医学 Q1 Agricultural and Biological Sciences Pub Date : 2024-07-01 Epub Date: 2024-05-31 DOI: 10.1007/s10519-024-10183-0
Liang-Dar Hwang, David M Evans

Structural equation models (SEMs) involving feedback loops may offer advantages over standard instrumental variables estimators in terms of modelling causal effects in the presence of bidirectional relationships. In the following note, we show that in the case of a single "exposure" and "outcome" variable, modelling relationships using a SEM with a simple bidirectional linear feedback loop offers no advantage over traditional instrumental variables estimators in terms of consistency (i.e. both approaches yield consistent estimates of the causal effect, provided that causal estimates are obtained in both directions). In the case of finite samples, traditional IV estimators and SEM exhibited similar power across many of the conditions we examined, although which method performed best depended on the residual correlation between variables and the strength of the instruments. In particular, the power of SEM was insensitive to the residual correlation between variables, whereas the power of the Wald estimator/2SLS improved (deteriorated) relative to SEM as the magnitude of the residual correlation increased (decreased) assuming a positive causal effect of the exposure on the outcome. The power of SEM improved relative to the Wald estimator/2SLS as the instruments explained more residual variance in the "outcome" variable.

与标准工具变量估计器相比,涉及反馈回路的结构方程模型(SEM)在模拟存在双向关系的因果效应方面可能更具优势。在下面的说明中,我们将证明,在单一 "暴露 "和 "结果 "变量的情况下,使用具有简单双向线性反馈回路的 SEM 来建立关系模型,在一致性方面与传统的工具变量估计器相比没有优势(也就是说,只要在两个方向上都能得到因果效应估计值,那么这两种方法都能得到一致的因果效应估计值)。在有限样本的情况下,传统的 IV 估计法和 SEM 在我们研究的许多条件下表现出相似的功率,尽管哪种方法表现最好取决于变量之间的残差相关性和工具的强度。特别是,SEM 的功率对变量间的残差相关性不敏感,而 Wald 估计器/2SLS 的功率则随着残差相关性的增大(减小)而相对于 SEM 提高(降低),假定暴露对结果有正的因果效应。随着工具解释了 "结果 "变量中更多的残差,SEM 的功率相对于 Wald 估计器/2SLS 有所提高。
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引用次数: 0
Prospective Effects of Self-Rated Health on Dementia Risk in Two Twin Studies of Aging. 两项双生子老龄化研究中自我健康评价对痴呆症风险的前瞻性影响。
IF 2.6 4区 医学 Q2 BEHAVIORAL SCIENCES Pub Date : 2024-07-01 Epub Date: 2024-06-01 DOI: 10.1007/s10519-024-10182-1
Matthew J D Pilgrim, Christopher R Beam, Marianne Nygaard, Deborah Finkel

Subjective health ratings are associated with dementia risk such that those who rate their health more poorly have increased risk for dementia. The genetic and environmental mechanisms underlying this association are unclear, as prior research cannot rule out whether the association is due to genetic confounds. The current study addresses this gap in two samples of twins, one from Sweden (N = 548) and one from Denmark (N = 4,373). Using genetically-informed, bivariate regression models, we assessed whether additive genetic effects explained the association between subjective health and dementia risk as indexed by a latent variable proxy measure. Age at intake, sex, education, depressive symptomatology, and follow-up time between subjective health and dementia risk assessments were included as covariates. Results indicate that genetic variance and other sources of confounding accounted for the majority of the effect of subjective health ratings on dementia risk. After adjusting for genetic confounding and other covariates, a small correlation was observed between subjective health and latent dementia risk in the Danish sample (rE = - .09, p < .05). The results provide further support for the genetic association between subjective health and dementia risk, and also suggest that subjective ratings of health measures may be useful for predicting dementia risk.

主观健康评分与痴呆症风险有关,健康评分较低的人患痴呆症的风险更高。这种关联的遗传和环境机制尚不清楚,因为之前的研究无法排除这种关联是否是由遗传因素造成的。目前的研究通过两组双胞胎样本填补了这一空白,一组来自瑞典(样本数=548),另一组来自丹麦(样本数=4373)。我们利用基因信息双变量回归模型,评估了附加基因效应是否能解释主观健康与痴呆症风险之间的关联,该关联由一个潜在变量替代测量指标来表示。作为协变量,还包括摄入时的年龄、性别、教育程度、抑郁症状以及主观健康状况和痴呆症风险评估之间的随访时间。结果表明,遗传变异和其他混杂因素是主观健康评分对痴呆症风险影响的主要原因。在对遗传混杂因素和其他协变量进行调整后,在丹麦样本中观察到主观健康状况与潜在痴呆症风险之间存在微小的相关性(rE = - .09,p<0.05)。
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引用次数: 0
The Garden of Forking Paths: Reinterpreting Haseman-Elston Regression for a Genotype-by-Environment Model. 岔路花园:重新诠释基因型-环境模型的 Haseman-Elston 回归。
IF 2.6 4区 医学 Q2 BEHAVIORAL SCIENCES Pub Date : 2024-07-01 Epub Date: 2024-06-18 DOI: 10.1007/s10519-024-10184-z
Guo-Bo Chen

Haseman-Elston regression (HE-reg) has been known as a classic tool for detecting an additive genetic variance component. However, in this study we find that HE-reg can capture GxE under certain conditions, so we derive and reinterpret the analytical solution of HE-reg. In the presence of GxE, it leads to a natural discrepancy between linkage and association results, the latter of which is not able to capture GxE if the environment is unknown. Considering linkage and association as symmetric designs, we investigate how the symmetry can and cannot hold in the absence and presence of GxE, and consequently we propose a pair of statistical tests, Symmetry Test I and Symmetry Test II, both of which can be tested using summary statistics. Test statistics, and their statistical power issues are also investigated for Symmetry Tests I and II. Increasing the number of sib pairs is important to improve statistical power for detecting GxE.

众所周知,哈斯曼-埃尔斯顿回归(HE-reg)是检测加性遗传变异成分的经典工具。然而,在本研究中,我们发现 HE-reg 可以在特定条件下捕捉 GxE,因此我们推导并重新解释了 HE-reg 的解析解。在存在 GxE 的情况下,这会导致联系和关联结果之间的自然差异,如果环境未知,后者无法捕捉 GxE。将联系和关联视为对称设计,我们研究了在没有 GxE 和有 GxE 的情况下,对称性如何成立和如何不成立,并因此提出了一对统计检验:对称性检验 I 和对称性检验 II。我们还对对称性检验 I 和 II 的检验统计量及其统计能力问题进行了研究。增加同卵双胞胎的数量对于提高检测 GxE 的统计能力非常重要。
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引用次数: 0
Using Alternative Definitions of Controls to Increase Statistical Power in GWAS. 使用对照组的替代定义来提高 GWAS 的统计功率。
IF 2.6 4区 医学 Q2 BEHAVIORAL SCIENCES Pub Date : 2024-07-01 Epub Date: 2024-06-13 DOI: 10.1007/s10519-024-10187-w
Sarah E Benstock, Katherine Weaver, John M Hettema, Brad Verhulst

Genome-wide association studies (GWAS) are often underpowered due to small effect sizes of common single nucleotide polymorphisms (SNPs) on phenotypes and extreme multiple testing thresholds. The most common approach for increasing statistical power is to increase sample size. We propose an alternative strategy of redefining case-control outcomes into ordinal case-subthreshold-asymptomatic variables. While maintaining the clinical case threshold, we subdivide controls into two groups: individuals who are symptomatic but do not meet the clinical criteria for diagnosis (subthreshold) and individuals who are effectively asymptomatic. We conducted a simulation study to examine the impact of effect size, minor allele frequency, population prevalence, and the prevalence of the subthreshold group on statistical power to detect genetic associations in three scenarios: a standard case-control, an ordinal, and a case-asymptomatic control analysis. Our results suggest the ordinal model consistently provides the greatest statistical power while the case-control model the least. Power in the case-asymptomatic control model reflects the case-control or ordinal model depending on the population prevalence and size of the subthreshold category. We then analyzed a major depression phenotype from the UK Biobank to corroborate our simulation results. Overall, the ordinal model improves statistical power in GWAS consistent with increasing the sample size by approximately 10%.

由于常见的单核苷酸多态性(SNPs)对表型的影响较小,而且多重测试阈值极高,因此全基因组关联研究(GWAS)的统计能力往往不足。提高统计能力的最常用方法是增加样本量。我们提出了另一种策略,即把病例对照结果重新定义为序数病例-次阈值-无症状变量。在保持临床病例阈值的同时,我们将对照组细分为两组:有症状但不符合临床诊断标准的个体(阈值以下)和实际无症状的个体。我们进行了一项模拟研究,在标准病例对照、序数对照和病例-无症状对照分析三种情况下,考察效应大小、小等位基因频率、人群患病率和阈值下群体患病率对检测遗传关联的统计能力的影响。我们的结果表明,序数模型的统计能力最大,而病例对照模型的统计能力最小。病例-无症状对照模型的统计能力反映了病例-对照模型还是序数模型,这取决于人群患病率和亚阈值类别的大小。我们随后分析了英国生物库中的重度抑郁症表型,以证实我们的模拟结果。总的来说,在将样本量增加约 10%的情况下,序数模型提高了 GWAS 的统计能力。
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引用次数: 0
Attachment and Political Personality are Heritable and Distinct Systems, and Both Share Genetics with Interpersonal Trust and Altruism. 依恋和政治人格是可遗传的独特系统,二者与人际信任和利他主义共享遗传学。
IF 2.6 4区 医学 Q2 BEHAVIORAL SCIENCES Pub Date : 2024-07-01 Epub Date: 2024-05-30 DOI: 10.1007/s10519-024-10185-y
Thomas Haarklau Kleppesto, Nikolai Olavi Czajkowski, Olav Vassend, Espen Roysamb, Nikolai Haahjem Eftedal, Jennifer Sheehy-Skeffington, Eivind Ystrom, Jonas R Kunst, Line C Gjerde, Lotte Thomsen

The attachment and caregiving domains maintain proximity and care-giving behavior between parents and offspring, in a way that has been argued to shape people's mental models of how relationships work, resulting in secure, anxious or avoidant interpersonal styles in adulthood. Several theorists have suggested that the attachment system is closely connected to orientations and behaviors in social and political domains, which should be grounded in the same set of familial experiences as are the different attachment styles. We use a sample of Norwegian twins (N = 1987) to assess the genetic and environmental relationship between attachment, trust, altruism, right-wing authoritarianism (RWA), and social dominance orientation (SDO). Results indicate no shared environmental overlap between attachment and ideology, nor even between the attachment styles or between the ideological traits, challenging conventional wisdom in developmental, social, and political psychology. Rather, evidence supports two functionally distinct systems, one for navigating intimate relationships (attachment) and one for navigating social hierarchies (RWA/SDO), with genetic overlap between traits within each system, and two distinct genetic linkages to trust and altruism. This is counter-posed to theoretical perspectives that link attachment, ideology, and interpersonal orientations through early relational experiences.

依恋和照料领域维系着父母与后代之间的亲近关系和照料行为,这种方式被认为塑造了人们关于人际关系如何运作的心智模式,导致了成年后安全、焦虑或回避的人际关系风格。一些理论家认为,依恋系统与人们在社会和政治领域的取向和行为密切相关,而这些取向和行为与不同的依恋风格一样,都应以相同的家庭经历为基础。我们利用挪威双胞胎样本(N = 1987)评估了依恋、信任、利他主义、右翼专制主义(RWA)和社会主导取向(SDO)之间的遗传和环境关系。结果表明,依恋和意识形态之间没有共同的环境重叠,甚至依恋风格之间或意识形态特征之间也没有共同的环境重叠,这对发展、社会和政治心理学的传统观点提出了挑战。相反,有证据表明存在两个功能截然不同的系统,一个是亲密关系导航系统(依恋),另一个是社会等级导航系统(RWA/SDO),每个系统中的特质之间存在遗传重叠,信任和利他主义之间存在两种截然不同的遗传联系。这与通过早期关系经验将依恋、意识形态和人际取向联系起来的理论观点相反。
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引用次数: 0
Statistical and Machine Learning Analysis in Brain-Imaging Genetics: A Review of Methods. 脑成像遗传学中的统计和机器学习分析:方法综述》。
IF 2.6 4区 医学 Q1 Agricultural and Biological Sciences Pub Date : 2024-05-01 Epub Date: 2024-02-10 DOI: 10.1007/s10519-024-10177-y
Connor L Cheek, Peggy Lindner, Elena L Grigorenko

Brain-imaging-genetic analysis is an emerging field of research that aims at aggregating data from neuroimaging modalities, which characterize brain structure or function, and genetic data, which capture the structure and function of the genome, to explain or predict normal (or abnormal) brain performance. Brain-imaging-genetic studies offer great potential for understanding complex brain-related diseases/disorders of genetic etiology. Still, a combined brain-wide genome-wide analysis is difficult to perform as typical datasets fuse multiple modalities, each with high dimensionality, unique correlational landscapes, and often low statistical signal-to-noise ratios. In this review, we outline the progress in brain-imaging-genetic methodologies starting from early massive univariate to current deep learning approaches, highlighting each approach's strengths and weaknesses and elongating it with the field's development. We conclude by discussing selected remaining challenges and prospects for the field.

脑成像-遗传分析是一个新兴的研究领域,旨在将描述大脑结构或功能的神经成像模式数据与捕捉基因组结构和功能的遗传数据进行整合,以解释或预测大脑的正常(或异常)表现。脑成像-基因研究为了解复杂的脑相关疾病/遗传病因紊乱提供了巨大的潜力。然而,由于典型的数据集融合了多种模式,每种模式都具有高维度、独特的相关性景观,而且统计信噪比通常较低,因此很难进行全脑基因组的综合分析。在这篇综述中,我们概述了大脑成像遗传学方法的进展,从早期的大规模单变量方法到目前的深度学习方法,强调了每种方法的优缺点,并随着该领域的发展而不断延伸。最后,我们讨论了该领域面临的挑战和前景。
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引用次数: 0
Are Genetic and Environmental Risk Factors for Psychopathology Amplified in Children with Below-Average Intelligence? A Population-Based Twin Study. 智力低于平均水平的儿童的精神病理学遗传和环境风险因素是否会放大?一项基于人口的双胞胎研究。
IF 2.6 4区 医学 Q1 Agricultural and Biological Sciences Pub Date : 2024-05-01 Epub Date: 2024-02-14 DOI: 10.1007/s10519-023-10174-7
Susanne Bruins, Elsje van Bergen, Maurits W Masselink, Stefania A Barzeva, Catharina A Hartman, Roy Otten, Nanda N J Rommelse, Conor V Dolan, Dorret I Boomsma

There is a negative association between intelligence and psychopathology. We analyzed data on intelligence and psychopathology to assess this association in seven-year-old Dutch twin pairs (ranging from 616 to 14,150 depending on the phenotype) and estimated the degree to which genetic and environmental factors common to intelligence and psychopathology explain the association. Secondly, we examined whether genetic and environmental effects on psychopathology are moderated by intelligence. We found that intelligence, as assessed by psychometric IQ tests, correlated negatively with childhood psychopathology, as assessed by the DSM-oriented scales of the Child Behavior Check List (CBCL). The correlations ranged between - .09 and - .15 and were mainly explained by common genetic factors. Intelligence moderated genetic and environmental effects on anxiety and negative affect, but not those on ADHD, ODD, and autism. The heritability of anxiety and negative affect was greatest in individuals with below-average intelligence. We discuss mechanisms through which this effect could arise, and we end with some recommendations for future research.

智力与精神病理学之间存在负相关。我们分析了有关智力和精神病理学的数据,以评估7岁荷兰双胞胎(根据表型,从616对到14150对不等)的这种关联,并估计了智力和精神病理学共同的遗传和环境因素对这种关联的解释程度。其次,我们研究了遗传和环境对精神病理学的影响是否会受到智力的调节。我们发现,通过心理智商测试评估的智力与通过儿童行为检查表(CBCL)中以 DSM 为导向的量表评估的儿童精神病理学呈负相关。相关性介于-.09和-.15之间,主要由共同的遗传因素解释。智力可以调节遗传和环境对焦虑和负面情绪的影响,但不能调节对多动症、定向障碍和自闭症的影响。智力低于平均水平的个体焦虑和消极情绪的遗传率最高。我们讨论了这种效应可能产生的机制,最后对未来的研究提出了一些建议。
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引用次数: 0
A Genetically Informed Study of the Association Between Perceived Stress and Loneliness. 关于感知到的压力与孤独之间关系的基因信息研究。
IF 2.6 4区 医学 Q1 Agricultural and Biological Sciences Pub Date : 2024-05-01 Epub Date: 2024-02-11 DOI: 10.1007/s10519-023-10176-5
Ryan Moshtael, Morgan E Lynch, Glen E Duncan, Christopher R Beam

Although research shows a strong positive association between perceived stress and loneliness, the genetic and environmental etiology underlying their association remains unknown. People with a genetic predisposition to perceived stress, for example, may be more prone to feeling lonely and vice versa. Conversely, unique factors in people's lives may explain differences in perceived stress levels that, in turn, affect feelings of loneliness. We tested whether genetic factors, environmental factors, or both account for the association between perceived stress and loneliness. Participants were 3,066 individual twins (nFemale = 2,154, 70.3%) from the Washington State Twin Registry who completed a survey during April-May, 2020. Structural equation modeling was used to analyze the item-level perceived stress and loneliness measures. The correlation between latent perceived stress and latent loneliness was .68. Genetic and nonshared environmental variance components underlying perceived stress accounted for 3.71% and 23.26% of the total variance in loneliness, respectively. The genetic correlation between loneliness and perceived stress was .45 and did not differ significantly between men and women. The nonshared environmental correlation was .54 and also did not differ between men and women. Findings suggest that holding constant the strong genetic association between perceived stress and loneliness, unique life experiences underlying people's perceived stress account for individual differences in loneliness.

尽管研究表明,感知到的压力和孤独感之间存在着很强的正相关性,但二者之间的遗传和环境病因仍然不得而知。例如,具有感知压力遗传倾向的人可能更容易感到孤独,反之亦然。反之,人们生活中的独特因素可能会解释人们感知到的压力水平的差异,进而影响孤独感。我们测试了遗传因素、环境因素或两者是否能解释感知压力与孤独感之间的关联。参与者是华盛顿州双胞胎登记处的 3066 对双胞胎(nFemale = 2,154, 70.3%),他们在 2020 年 4-5 月间完成了一项调查。结构方程模型用于分析项目层面的感知压力和孤独感测量。潜在感知压力和潜在孤独感之间的相关性为 0.68。感知压力的遗传和非共享环境变异成分分别占孤独感总变异的 3.71% 和 23.26%。孤独感与感知压力之间的遗传相关性为 0.45,男女之间差异不大。非共享环境相关性为 0.54,男女之间也没有差异。研究结果表明,在感知到的压力与孤独感之间的遗传相关性保持不变的情况下,人们感知到的压力背后的独特生活经历是造成孤独感个体差异的原因。
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引用次数: 0
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Behavior Genetics
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