Miguel Prudêncio, Cristina D Rodrigues, Maria M Mota
{"title":"The relevance of host genes in malaria.","authors":"Miguel Prudêncio, Cristina D Rodrigues, Maria M Mota","doi":"","DOIUrl":"","url":null,"abstract":"","PeriodicalId":87484,"journal":{"name":"SEB experimental biology series","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26810941","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
David B Sattelle, Andrew K Jones, Laurence A Brown, Steven D Buckingham, Christopher J Mee, Luanda Pym
{"title":"Nicotinic acetylcholine receptors as drug/chemical targets, contributions from comparative genomics, forward and reverse genetics.","authors":"David B Sattelle, Andrew K Jones, Laurence A Brown, Steven D Buckingham, Christopher J Mee, Luanda Pym","doi":"","DOIUrl":"","url":null,"abstract":"","PeriodicalId":87484,"journal":{"name":"SEB experimental biology series","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26811317","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Drug-target discovery in silico: using the web to identify novel molecular targets for drug action.","authors":"David S Wishart","doi":"","DOIUrl":"","url":null,"abstract":"","PeriodicalId":87484,"journal":{"name":"SEB experimental biology series","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26811320","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Frauz Conen, Argyro Zerva, Dominique Arrouays, Claude Jolivet, Paul G Jarvis, John Grace, Maurizio Mencuccini
Estimating soil carbon content as the product of mean carbon concentration and bulk density can result in considerable overestimation. Carbon concentration and soil mass need to be measured on the same sample and carbon contents calculated for each individual sample before averaging. The effect of this bias is likely to be smaller (but still greater than zero) when the primary objective is to determine stock changes over time. Variance and mean carbon content are significantly and positively related to each other, although some sites showed much higher variability than predicted by this relationship, as a likely consequence of their particular site history, forest management, and micro-topography. Because of the proportionality between mean and variance, the number of samples required to detect a fixed change in soil carbon stocks varied directly with the site mean carbon content from less than 10 to several thousands across the range of carbon stocks normally encountered in temperate and Boreal forests. This raises important questions about how to derive an optimal sampling strategy across such a varied range of conditions so as to achieve the aims of the Kyoto Protocol. Overall, on carbon-poor forest sites with little or no disturbance to the soil profile, it is possible to detect changes in total soil organic carbon over time of the order of 0.5 kg (C) m(-2) with manageable sample sizes even using simple random sampling (i.e., about 50 samples per sampling point). More efficient strategies will reveal even smaller differences. On disturbed forest sites (ploughed, windthrow) this is no longer possible (required sample sizes are much larger than 100). Soils developed on coarse aeolian sediments (sand dunes), or where buried logs or harvest residues of the previous rotation are present, can also exhibit large spatial variability in soil carbon. Generally, carbon-rich soils will always require larger numbers of samples. On these sites, simple random sampling is unlikely to be the preferred method, because of its inherent inefficiency. More sophisticated approaches, such as paired re-sampling inside relatively small plots (see, for example, Ellert et al., 2001) are likely to reduce sample size significantly and lead to detection of smaller differences in carbon stocks over time. However, it remains to be shown that at these sites the application of efficient sampling designs will result in the detection of differences relevant for the objectives of the Kyoto Protocol (cf., Conant et al., 2003). Finally, it should also be noted that, compared to the accuracy with which changes in atmospheric carbon content can be detected (less than 1 p.p.m. CO2), changes in soil carbon stocks are very uncertain. A release of 0.5 kg (C) from 1 m2 of soil surface is equivalent to an increase in CO, concentration of about 125 p.p.m. in the air column above the same area.
将土壤碳含量估算为平均碳浓度和容重的乘积可能会导致相当大的高估。需要在同一样品上测量碳浓度和土壤质量,并在取平均值之前计算每个样品的碳含量。当主要目标是确定库存随时间的变化时,这种偏差的影响可能较小(但仍大于零)。方差和平均碳含量呈显著正相关,尽管一些样地表现出比这种关系预测的高得多的变异性,这可能是它们特定的样地历史、森林管理和微地形的结果。由于平均值和方差之间的比例关系,在温带和北方森林通常遇到的碳储量范围内,检测土壤碳储量固定变化所需的样品数量与站点平均碳含量直接变化,从不足10到数千不等。这就提出了一个重要的问题,即如何在如此不同的条件范围内推导出最佳抽样策略,以实现《京都议定书》的目标。总体而言,在土壤剖面很少或没有受到干扰的低碳森林场地上,即使使用简单的随机抽样(即每个采样点约50个样本),也可以在可管理的样本量下检测到土壤总有机碳随时间变化的0.5 kg (C) m(-2)量级。更有效的策略将揭示更小的差异。在受干扰的森林地点(犁过的,被风吹过的),这不再是可能的(所需的样本量远远大于100)。在粗糙的风成沉积物(沙丘)上发育的土壤,或在以前轮作的掩埋原木或收获残留物存在的地方,土壤碳也可能表现出很大的空间变异性。一般来说,富含碳的土壤总是需要大量的样品。在这些站点上,简单的随机抽样不太可能是首选的方法,因为其固有的低效率。更复杂的方法,如在相对较小的地块内成对重新采样(例如,参见Ellert et al., 2001)可能会显著减少样本量,并导致检测到碳储量随时间的较小差异。然而,还有待证明的是,在这些地点,有效抽样设计的应用将导致发现与《京都议定书》目标相关的差异(参见,Conant等人,2003年)。最后,还应该指出的是,与可以检测大气碳含量变化的准确性(小于1 pm CO2)相比,土壤碳储量的变化非常不确定。从1平方米的土壤表面释放0.5公斤(C)相当于在同一地区以上的空气柱中增加约125ppm的CO浓度。
{"title":"The carbon balance of forest soils: detectability of changes in soil carbon stocks in temperate and Boreal forests.","authors":"Frauz Conen, Argyro Zerva, Dominique Arrouays, Claude Jolivet, Paul G Jarvis, John Grace, Maurizio Mencuccini","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Estimating soil carbon content as the product of mean carbon concentration and bulk density can result in considerable overestimation. Carbon concentration and soil mass need to be measured on the same sample and carbon contents calculated for each individual sample before averaging. The effect of this bias is likely to be smaller (but still greater than zero) when the primary objective is to determine stock changes over time. Variance and mean carbon content are significantly and positively related to each other, although some sites showed much higher variability than predicted by this relationship, as a likely consequence of their particular site history, forest management, and micro-topography. Because of the proportionality between mean and variance, the number of samples required to detect a fixed change in soil carbon stocks varied directly with the site mean carbon content from less than 10 to several thousands across the range of carbon stocks normally encountered in temperate and Boreal forests. This raises important questions about how to derive an optimal sampling strategy across such a varied range of conditions so as to achieve the aims of the Kyoto Protocol. Overall, on carbon-poor forest sites with little or no disturbance to the soil profile, it is possible to detect changes in total soil organic carbon over time of the order of 0.5 kg (C) m(-2) with manageable sample sizes even using simple random sampling (i.e., about 50 samples per sampling point). More efficient strategies will reveal even smaller differences. On disturbed forest sites (ploughed, windthrow) this is no longer possible (required sample sizes are much larger than 100). Soils developed on coarse aeolian sediments (sand dunes), or where buried logs or harvest residues of the previous rotation are present, can also exhibit large spatial variability in soil carbon. Generally, carbon-rich soils will always require larger numbers of samples. On these sites, simple random sampling is unlikely to be the preferred method, because of its inherent inefficiency. More sophisticated approaches, such as paired re-sampling inside relatively small plots (see, for example, Ellert et al., 2001) are likely to reduce sample size significantly and lead to detection of smaller differences in carbon stocks over time. However, it remains to be shown that at these sites the application of efficient sampling designs will result in the detection of differences relevant for the objectives of the Kyoto Protocol (cf., Conant et al., 2003). Finally, it should also be noted that, compared to the accuracy with which changes in atmospheric carbon content can be detected (less than 1 p.p.m. CO2), changes in soil carbon stocks are very uncertain. A release of 0.5 kg (C) from 1 m2 of soil surface is equivalent to an increase in CO, concentration of about 125 p.p.m. in the air column above the same area.</p>","PeriodicalId":87484,"journal":{"name":"SEB experimental biology series","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2005-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26831732","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2005-01-01DOI: 10.4324/9780203501344-12
P. Högberg, A. Nordgren, M. Högberg, M. Ottosson‐Löfvenius, Bhupinderpal-Singh, P. Olsson, S. Linder
Soil-surface CO2 efflux ('soil respiration') accounts for roughly two-thirds of forest ecosystem respiration, and can be divided into heterotrophic and autotrophic components. Conventionally, the latter is defined as respiration by plant roots. In Boreal forests, however, fine roots of trees are invariably covered by ectomycorrhizal fungi, which by definition are heterotrophs, but like the roots, receive sugars derived from photosynthesis. There is also a significant leaching of labile carbon compounds from the ectomycorrhizal roots. It is, therefore, more meaningful in the context of carbon balance studies to include mycorrhizal fungi and other mycorrhizosphere organisms, dependent on the direct flux of labile carbon from photosynthesis, in the autotrophic component. Hence, heterotrophic activity becomes reserved for the decomposition of more complex organic molecules in litter and other forms of soil organic matter. In reality, the complex situation is perhaps best described as a continuum from strict autotrophy to strict heterotrophy. As a result of this, and associated methodological problems, estimates of the contribution of autotrophic respiration to total soil respiration have been highly variable. Based on recent stand-scale tree girdling experiments we have estimated that autotrophic respiration in boreal forest accounts for up to 50-65% of soil respiration during the snow-free part of the year. Girdling experiments and studies of the delta(13)C of the soil CO2 efflux show that there is a lag of a few days between the carbon uptake by photosynthesis and the release by autotrophic soil respiration of the assimilated carbon. In contrast, estimates of 'bomb 14C' and other approaches have suggested that it takes years to decades between carbon uptake via photosynthesis and the bulk of soil heterotrophic activity. Temperature is normally used as a driver in models of soil processes and it is often assumed that autotrophic soil activity is more sensitive to temperature than is heterotrophic activity, but this is questionable. It is inherently difficult to make a precise separation of autotrophic and heterotrophic respiration from soils. The partitioning between these two components is highly variable in space and time, and taxonomic autotrophs and heterotrophs may perform the function of the other group to some degree. Care should be taken to disturb as little as possible the delicate plant-microbe-soil system, and this speaks for non-intrusive isotopic methods. There are, however, problems in modelling the flux of isotopes through this complex system. Girdling of tree stands is a very robust alternative approach to make the distinction between autotrophic and heterotrophic activities, but ultimately kills the trees and cannot, therefore, always be used. A further development would be to block the phloem sugar transport reversibly. We propose that thus assumption needs further critical testing.
{"title":"Fractional contributions by autotrophic and heterotrophic respiration to soil-surface CO2 efflux in Boreal forests.","authors":"P. Högberg, A. Nordgren, M. Högberg, M. Ottosson‐Löfvenius, Bhupinderpal-Singh, P. Olsson, S. Linder","doi":"10.4324/9780203501344-12","DOIUrl":"https://doi.org/10.4324/9780203501344-12","url":null,"abstract":"Soil-surface CO2 efflux ('soil respiration') accounts for roughly two-thirds of forest ecosystem respiration, and can be divided into heterotrophic and autotrophic components. Conventionally, the latter is defined as respiration by plant roots. In Boreal forests, however, fine roots of trees are invariably covered by ectomycorrhizal fungi, which by definition are heterotrophs, but like the roots, receive sugars derived from photosynthesis. There is also a significant leaching of labile carbon compounds from the ectomycorrhizal roots. It is, therefore, more meaningful in the context of carbon balance studies to include mycorrhizal fungi and other mycorrhizosphere organisms, dependent on the direct flux of labile carbon from photosynthesis, in the autotrophic component. Hence, heterotrophic activity becomes reserved for the decomposition of more complex organic molecules in litter and other forms of soil organic matter. In reality, the complex situation is perhaps best described as a continuum from strict autotrophy to strict heterotrophy. As a result of this, and associated methodological problems, estimates of the contribution of autotrophic respiration to total soil respiration have been highly variable. Based on recent stand-scale tree girdling experiments we have estimated that autotrophic respiration in boreal forest accounts for up to 50-65% of soil respiration during the snow-free part of the year. Girdling experiments and studies of the delta(13)C of the soil CO2 efflux show that there is a lag of a few days between the carbon uptake by photosynthesis and the release by autotrophic soil respiration of the assimilated carbon. In contrast, estimates of 'bomb 14C' and other approaches have suggested that it takes years to decades between carbon uptake via photosynthesis and the bulk of soil heterotrophic activity. Temperature is normally used as a driver in models of soil processes and it is often assumed that autotrophic soil activity is more sensitive to temperature than is heterotrophic activity, but this is questionable. It is inherently difficult to make a precise separation of autotrophic and heterotrophic respiration from soils. The partitioning between these two components is highly variable in space and time, and taxonomic autotrophs and heterotrophs may perform the function of the other group to some degree. Care should be taken to disturb as little as possible the delicate plant-microbe-soil system, and this speaks for non-intrusive isotopic methods. There are, however, problems in modelling the flux of isotopes through this complex system. Girdling of tree stands is a very robust alternative approach to make the distinction between autotrophic and heterotrophic activities, but ultimately kills the trees and cannot, therefore, always be used. A further development would be to block the phloem sugar transport reversibly. We propose that thus assumption needs further critical testing.","PeriodicalId":87484,"journal":{"name":"SEB experimental biology series","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2005-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"70588411","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
T. A. Black, D. Gaumont-Guay, R. Jassal, B. Amiro, P. Jarvis, S. Gower, F. Kelliher, A. Dunn, S. Wofsy
The Boreal forest is the world's second largest forested biome occupying the circumpolar region between 50 degrees N and 70 degrees N. This heterogeneous biome stores about 25% of all terrestrial carbon. We have reviewed EC measurements of CO2 exchange between the atmosphere and Boreal forests, and assessed progress in understanding the controlling processes. We have assessed net ecosystem productivity, the net balance between net primary productivity and heterotrophic respiration, measured using the EC method, for 38 Boreal forest sites. Gross ecosystem productivity has been estimated by adding day-time EC-measured CO2 fluxes to respiration estimated from night-time relationships between respiration and temperature. Maximum midday values of gross ecosystem productivity vary from 33 pmol m(-2) s(-1) for aspen to 6 micromol m(-2) s(-1) for larch stands. Long-term EC flux measurements, ongoing at nine Boreal sites, have shown the strong impact of spring weather and growing season water balance on annual net ecosystem productivity. Estimation of net biome production, incorporating the effects of disturbance resulting from forest fires and logging, has progressed significantly in recent years. After disturbance, summer measurements in Boreal chronosequences suggest that it takes about 10 years before growing season carbon uptake offsets the decomposition emissions. Small-scale exchange rate measurements using chambers and manipulative experiments such as stem girdling and soil heating help to understand the processes and mechanisms playing major roles in the carbon balance of terrestrial ecosystems. Aircraft EC flux measurements, convective boundary layer carbon budgets, and (13)C/12C changes in the atmosphere play an important role in validating estimates of regional carbon exchange based on scaled up EC measurements. Atmospheric inverse models are an important approach to studying regional and global carbon balance but need further improvement to yield reliable quantitative results.
{"title":"Measurement of CO2 exchange between Boreal forest and the atmosphere.","authors":"T. A. Black, D. Gaumont-Guay, R. Jassal, B. Amiro, P. Jarvis, S. Gower, F. Kelliher, A. Dunn, S. Wofsy","doi":"10.4324/9780203501344-8","DOIUrl":"https://doi.org/10.4324/9780203501344-8","url":null,"abstract":"The Boreal forest is the world's second largest forested biome occupying the circumpolar region between 50 degrees N and 70 degrees N. This heterogeneous biome stores about 25% of all terrestrial carbon. We have reviewed EC measurements of CO2 exchange between the atmosphere and Boreal forests, and assessed progress in understanding the controlling processes. We have assessed net ecosystem productivity, the net balance between net primary productivity and heterotrophic respiration, measured using the EC method, for 38 Boreal forest sites. Gross ecosystem productivity has been estimated by adding day-time EC-measured CO2 fluxes to respiration estimated from night-time relationships between respiration and temperature. Maximum midday values of gross ecosystem productivity vary from 33 pmol m(-2) s(-1) for aspen to 6 micromol m(-2) s(-1) for larch stands. Long-term EC flux measurements, ongoing at nine Boreal sites, have shown the strong impact of spring weather and growing season water balance on annual net ecosystem productivity. Estimation of net biome production, incorporating the effects of disturbance resulting from forest fires and logging, has progressed significantly in recent years. After disturbance, summer measurements in Boreal chronosequences suggest that it takes about 10 years before growing season carbon uptake offsets the decomposition emissions. Small-scale exchange rate measurements using chambers and manipulative experiments such as stem girdling and soil heating help to understand the processes and mechanisms playing major roles in the carbon balance of terrestrial ecosystems. Aircraft EC flux measurements, convective boundary layer carbon budgets, and (13)C/12C changes in the atmosphere play an important role in validating estimates of regional carbon exchange based on scaled up EC measurements. Atmospheric inverse models are an important approach to studying regional and global carbon balance but need further improvement to yield reliable quantitative results.","PeriodicalId":87484,"journal":{"name":"SEB experimental biology series","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2005-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"70588804","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Peter Högberg, Anders Nordgren, Mona N Högberg, Mikaell Ottosson-Löfvenius, Bhupinderpal-Singh, Per Olsson, Sune Linder
Soil-surface CO2 efflux ('soil respiration') accounts for roughly two-thirds of forest ecosystem respiration, and can be divided into heterotrophic and autotrophic components. Conventionally, the latter is defined as respiration by plant roots. In Boreal forests, however, fine roots of trees are invariably covered by ectomycorrhizal fungi, which by definition are heterotrophs, but like the roots, receive sugars derived from photosynthesis. There is also a significant leaching of labile carbon compounds from the ectomycorrhizal roots. It is, therefore, more meaningful in the context of carbon balance studies to include mycorrhizal fungi and other mycorrhizosphere organisms, dependent on the direct flux of labile carbon from photosynthesis, in the autotrophic component. Hence, heterotrophic activity becomes reserved for the decomposition of more complex organic molecules in litter and other forms of soil organic matter. In reality, the complex situation is perhaps best described as a continuum from strict autotrophy to strict heterotrophy. As a result of this, and associated methodological problems, estimates of the contribution of autotrophic respiration to total soil respiration have been highly variable. Based on recent stand-scale tree girdling experiments we have estimated that autotrophic respiration in boreal forest accounts for up to 50-65% of soil respiration during the snow-free part of the year. Girdling experiments and studies of the delta(13)C of the soil CO2 efflux show that there is a lag of a few days between the carbon uptake by photosynthesis and the release by autotrophic soil respiration of the assimilated carbon. In contrast, estimates of 'bomb 14C' and other approaches have suggested that it takes years to decades between carbon uptake via photosynthesis and the bulk of soil heterotrophic activity. Temperature is normally used as a driver in models of soil processes and it is often assumed that autotrophic soil activity is more sensitive to temperature than is heterotrophic activity, but this is questionable. It is inherently difficult to make a precise separation of autotrophic and heterotrophic respiration from soils. The partitioning between these two components is highly variable in space and time, and taxonomic autotrophs and heterotrophs may perform the function of the other group to some degree. Care should be taken to disturb as little as possible the delicate plant-microbe-soil system, and this speaks for non-intrusive isotopic methods. There are, however, problems in modelling the flux of isotopes through this complex system. Girdling of tree stands is a very robust alternative approach to make the distinction between autotrophic and heterotrophic activities, but ultimately kills the trees and cannot, therefore, always be used. A further development would be to block the phloem sugar transport reversibly. We propose that thus assumption needs further critical testing.
{"title":"Fractional contributions by autotrophic and heterotrophic respiration to soil-surface CO2 efflux in Boreal forests.","authors":"Peter Högberg, Anders Nordgren, Mona N Högberg, Mikaell Ottosson-Löfvenius, Bhupinderpal-Singh, Per Olsson, Sune Linder","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Soil-surface CO2 efflux ('soil respiration') accounts for roughly two-thirds of forest ecosystem respiration, and can be divided into heterotrophic and autotrophic components. Conventionally, the latter is defined as respiration by plant roots. In Boreal forests, however, fine roots of trees are invariably covered by ectomycorrhizal fungi, which by definition are heterotrophs, but like the roots, receive sugars derived from photosynthesis. There is also a significant leaching of labile carbon compounds from the ectomycorrhizal roots. It is, therefore, more meaningful in the context of carbon balance studies to include mycorrhizal fungi and other mycorrhizosphere organisms, dependent on the direct flux of labile carbon from photosynthesis, in the autotrophic component. Hence, heterotrophic activity becomes reserved for the decomposition of more complex organic molecules in litter and other forms of soil organic matter. In reality, the complex situation is perhaps best described as a continuum from strict autotrophy to strict heterotrophy. As a result of this, and associated methodological problems, estimates of the contribution of autotrophic respiration to total soil respiration have been highly variable. Based on recent stand-scale tree girdling experiments we have estimated that autotrophic respiration in boreal forest accounts for up to 50-65% of soil respiration during the snow-free part of the year. Girdling experiments and studies of the delta(13)C of the soil CO2 efflux show that there is a lag of a few days between the carbon uptake by photosynthesis and the release by autotrophic soil respiration of the assimilated carbon. In contrast, estimates of 'bomb 14C' and other approaches have suggested that it takes years to decades between carbon uptake via photosynthesis and the bulk of soil heterotrophic activity. Temperature is normally used as a driver in models of soil processes and it is often assumed that autotrophic soil activity is more sensitive to temperature than is heterotrophic activity, but this is questionable. It is inherently difficult to make a precise separation of autotrophic and heterotrophic respiration from soils. The partitioning between these two components is highly variable in space and time, and taxonomic autotrophs and heterotrophs may perform the function of the other group to some degree. Care should be taken to disturb as little as possible the delicate plant-microbe-soil system, and this speaks for non-intrusive isotopic methods. There are, however, problems in modelling the flux of isotopes through this complex system. Girdling of tree stands is a very robust alternative approach to make the distinction between autotrophic and heterotrophic activities, but ultimately kills the trees and cannot, therefore, always be used. A further development would be to block the phloem sugar transport reversibly. We propose that thus assumption needs further critical testing.</p>","PeriodicalId":87484,"journal":{"name":"SEB experimental biology series","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2005-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26831733","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tuomas Laurila, Mika Aurela, Annalea Lohila, Juha-Pekka Tuovinen
{"title":"Trace gas and CO2 contributions of northern peatlands to global warming potential.","authors":"Tuomas Laurila, Mika Aurela, Annalea Lohila, Juha-Pekka Tuovinen","doi":"","DOIUrl":"","url":null,"abstract":"","PeriodicalId":87484,"journal":{"name":"SEB experimental biology series","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2005-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26831734","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Rainer Brumme, Louis V Verchot, Pertti J Martikainen, Christopher S Potter
{"title":"Contribution of trace gases nitrous oxide (N2O) and methane (CH4) to the atmospheric warming balance of forest biomes.","authors":"Rainer Brumme, Louis V Verchot, Pertti J Martikainen, Christopher S Potter","doi":"","DOIUrl":"","url":null,"abstract":"","PeriodicalId":87484,"journal":{"name":"SEB experimental biology series","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2005-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26831735","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}