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WWP2 binds to NKRF, enhances the NF-κB signaling, and promotes malignant phenotypes of acute myeloid leukemia cells. WWP2与NKRF结合,增强NF-κB信号传导,并促进急性髓系白血病细胞的恶性表型。
IF 2.9 3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 Epub Date: 2023-11-03 DOI: 10.1139/bcb-2022-0360
Hongjia Wang, Xin Lian, Kexin Wang, Shuye Wang

Acute myeloid leukemia (AML) is one of the hematological malignancies with a high recurrence rate. WW domain-containing E3 ubiquitin protein ligase 2 (WWP2) is identified as a pivotal regulator of tumor progression. This study aimed to assess the possible role of WWP2 in AML. Analysis of the GEPIA database indicated an elevated WWP2 expression in AML. We established stable WWP2-overexpressed or WWP2-silenced cells using lentivirus loaded with cDNA encoding WWP2 mRNA or shRNA targeting WWP2. Notably, WWP2 overexpression facilitated cell proliferation and cell cycle progression, which was manifested as the increase of colony formation number, S-phase percentage and cell cycle related protein levels. As observed, WWP2 knockdown presented opposite effects, leading to inhibition of tumorigenicity. Strikingly, WWP2 knockdown induced apoptosis, accompanied by upregulation of pro-apoptosis proteins cleaved caspase-9, Bax and cleaved caspase-3 and downregulation of anti-apoptosis protein Bcl-2. Functionally, we further confirmed that WWP2 overexpression enhanced the NF-κB signaling and upregulated the levels of downstream genes, which may contribute to aggravating the development of AML. More importantly, by co-immunoprecipitation assay, we verified that WWP2 bound to NF-κB-repressing factor (NKRF) and promoted NKRF ubiquitylation. Dramatically, NKRF overexpression abolished the role of WWP2 in facilitating the process of AML. Overall, our observations confirm that WWP2 exerts a critical role in the tumorigenicity of AML, and NKRF is regarded as an essential factor in the WWP2-mediated AML progression. WWP2 may be proposed as a promising target of AML.

急性髓细胞白血病(AML)是一种复发率较高的血液系统恶性肿瘤。含有WW结构域的E3泛素蛋白连接酶2(WWP2)被鉴定为肿瘤进展的关键调节因子。本研究旨在评估WWP2在AML中的可能作用。GEPIA数据库的分析表明AML中WWP2表达升高。我们使用慢病毒建立了稳定的WWP2过表达或WWP2沉默的细胞,该慢病毒负载有编码WWP2 mRNA或靶向WWP2的shRNA的cDNA。值得注意的是,WWP2过表达促进了细胞增殖和细胞周期进展,表现为集落形成数量、S期百分比和细胞周期相关蛋白水平的增加。正如所观察到的,WWP2敲除呈现相反的效果,导致对致瘤性的抑制。引人注目的是,WWP2敲低诱导细胞凋亡,同时上调促凋亡蛋白裂解的胱天蛋白酶9、Bax和裂解的胱天蛋白酶3,下调抗凋亡蛋白Bcl-2。在功能上,我们进一步证实了WWP2过表达增强了NF-κB信号传导并上调了下游基因的水平,这可能有助于加重AML的发展。更重要的是,通过共免疫沉淀分析,我们验证了WWP2与NF-κB抑制因子(NKRF)结合并促进NKRF泛素化。引人注目的是,NKRF过表达消除了WWP2在促进AML过程中的作用。总之,我们的观察结果证实,WWP2在AML的致瘤性中发挥着关键作用,NKRF被认为是WWP2介导的AML进展的一个重要因素。WWP2可能被认为是AML的一个有希望的靶点。
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引用次数: 0
BioCanRx Summit for Cancer Immunotherapy 2022 Proceedings. 癌症免疫疗法BioCanRx峰会2022年论文集。
IF 2.9 3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 Epub Date: 2023-10-23 DOI: 10.1139/bcb-2023-0207
Stacey N Lee, Victoria Hoskin, Céline M Laumont, Shannon Snelling, Lorenzo Lindo, Lou Bird, Vera Samarkina, Chantale Thurston, Grace Fox, Sarah Ivanco, Megan Mahoney, Jeanette E Boudreau, Sarah Nersesian

From 19 to 21 November 2022, BioCanRx held its first post-pandemic in-person Summit for Cancer Immunotherapy in Montreal, Canada. The meeting was well attended by patients, trainees, researchers, clinicians, and industry professionals, who came together to discuss the current state and future of biotherapeutics for cancer in Canada and beyond. Three plenaries, three keynote speakers, a lively debate, and panel discussions, together with poster sessions and a social event, made the event memorable and productive. The current state of cellular therapies, cellular engineering, clinical trials, and the role of the cancer microbiome were discussed in plenary session, and the patient voice was welcomed and present throughout the meeting, in large part due to the Learning Institute, a BioCanRx initiative to include patient partners in research. In this meeting review, we highlight the platform presentations, keynote speakers, debate combatants, panellists, and the patient perspective on the annual meeting.

2022年11月19日至21日,BioCanRx在加拿大蒙特利尔举行了第一届癌症免疫治疗疫情后住院峰会。参加会议的有患者、受训人员、研究人员、临床医生和行业专业人士,他们聚在一起讨论了加拿大及其他地区癌症生物治疗的现状和未来。三次全体会议、三位主旨发言人、一场生动的辩论和小组讨论,加上海报会议和一次社交活动,使这次活动令人难忘,富有成效。全体会议讨论了细胞疗法、细胞工程、临床试验的现状以及癌症微生物组的作用,并欢迎患者的声音,并在整个会议上发言,这在很大程度上归功于学习研究所,这是一项BioCanRx倡议,旨在将患者合作伙伴纳入研究。在本次会议回顾中,我们重点介绍了平台演讲、主旨发言人、辩论斗士、小组成员以及对年会的耐心看法。
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引用次数: 0
Crosstalk between chromatin, chromosomes, and epigenetics. 染色质、染色体和表观遗传学之间的串扰。
IF 2.9 3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 Epub Date: 2023-08-29 DOI: 10.1139/bcb-2023-0165
Alyssa Ialongo, Ssu-Yu Yeh, Ho Sung Rhee

The International Asilomar Chromatin, Chromosomes, and Epigenetics Conference was held online from 8 to 10 December 2022. Topics of this year's conference included chromosome dysregulation, genome integrity, nuclear organization, regulation of chromatin, epigenetics, transcription, and gene regulation in cell differentiation and disease. The meeting featured four keynote speakers, including Yamini Dalal (National Cancer Institute, USA), Meaghan Jones (University of Manitoba, Canada), Pedro Rocha (National Institute of Child Health and Human Development, USA), and Vincent Pasque (University of Leuven, Belgium). The meeting brought together scientists at all career stages to present and discuss their work in the fields of chromatin and epigenetics.

国际精子染色质、染色体和表观遗传学会议于2022年12月8日至10日在线举行。今年会议的主题包括染色体失调、基因组完整性、核组织、染色质调节、表观遗传学、转录以及细胞分化和疾病中的基因调节。会议有四位主旨发言人,包括Yamini Dalal(美国癌症国家研究所)、Meaghan Jones(加拿大马尼托巴大学)、Pedro Rocha(美国国家儿童健康与人类发展研究所)和Vincent Pasque(比利时鲁汶大学)。会议汇集了职业生涯各个阶段的科学家,介绍并讨论了他们在染色质和表观遗传学领域的工作。
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引用次数: 0
Comparative analysis of the effect of hypoxia in two different tumor cell models shows the differential involvement of PTEN control of proangiogenic pathways. 对两种不同肿瘤细胞模型中低氧效应的比较分析表明,PTEN 对促血管生成途径的控制有不同程度的参与。
IF 2.9 3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 Epub Date: 2023-07-17 DOI: 10.1139/bcb-2023-0047
Aleksandra Majewska, Klaudia Brodaczewska, Aleksandra Filipiak-Duliban, Claudine Kieda

Hypoxia, low, non-physiological oxygen tension is a key regulator of tumor microenvironment, determining the pathological tumor vascularization. Alleviation of hypoxia through vessel normalization may be a promising therapeutic approach. We aimed to assess the role of low oxygen tension in PTEN-related pathways and proangiogenic response, in vitro, in two different tumor cell lines, focusing on potential therapeutic targets for tumor vessel normalization. Downregulation of PTEN in hypoxia mediates the activation of distinct mechanisms: cytoplasmic pAKT activation in melanoma and pMDM2 modulation in kidney cancer. We show that hypoxia-induced proangiogenic potential was stronger in Renca cells than B16 F10-confirmed by a distinct secretory potential and different ability to affect endothelial cells functions. Therefore, the impact of hypoxia on PTEN-mediated regulation may determine the therapeutic targets and effectiveness of vessel normalization and intrinsic characteristics of cancer cell have to be taken into account when designing treatment.

缺氧(非生理性的低氧张力)是肿瘤微环境的一个关键调节因子,决定了肿瘤血管的病理状态。通过血管正常化缓解缺氧可能是一种有前景的治疗方法。我们的目的是在两种不同的肿瘤细胞系中,在体外评估低氧张力在 PTEN 相关通路和促血管生成反应中的作用,重点关注肿瘤血管正常化的潜在治疗靶点。缺氧时 PTEN 的下调介导了不同机制的激活:黑色素瘤中的细胞质 pAKT 激活和肾癌中的 pMDM2 调节。我们的研究表明,缺氧诱导的促血管生成潜能在 Renca 细胞中比在 B16 F10 中更强,这一点通过不同的分泌潜能和影响内皮细胞功能的不同能力得到了证实。因此,缺氧对PTEN介导的调控的影响可能决定血管正常化的治疗目标和效果,在设计治疗方案时必须考虑到癌细胞的内在特征。
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引用次数: 0
LINE-1: an emerging initiator of cGAS-STING signalling and inflammation that is dysregulated in disease. LINE-1:一种新出现的cGAS STING信号和炎症的引发剂,在疾病中失调。
IF 2.9 3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 Epub Date: 2023-08-29 DOI: 10.1139/bcb-2023-0134
Sabateeshan Mathavarajah, Graham Dellaire

The cGAS-STING (cyclic GMP-AMP synthase (cGAS)-stimulator of interferon genes (STING)) axis integrates DNA damage and cellular stress with type I interferon (IFN) signalling to facilitate transcriptional changes underlying inflammatory stress responses. The cGAS-STING pathway responds to cytosolic DNA in the form of double-stranded DNA, micronuclei, and long interspersed nuclear element 1 (L1) retroelements. L1 retroelements are a class of self-propagating non-long terminal repeat transposons that have remained highly active in mammalian genomes. L1 retroelements are emerging as important inducers of cGAS-STING and IFN signalling, which are often dysregulated in several diseases, including cancer. A key repressor of cGAS-STING and L1 activity is the exonuclease three prime repair exonuclease 1 (TREX1), and loss of TREX1 promotes the accumulation of L1. In addition, L1 dysregulation is a common theme among diseases with chronic induction of type I IFN signalling through cGAS-STING, such as Aicardi-Goutières syndrome, Fanconi anemia, and dermatomyositis. Although TREX1 is highly conserved in tetrapod species, other suppressor proteins exist that inhibit L1 retrotransposition. These suppressor genes when mutated are often associated with diseases characterized by unchecked inflammation that is associated with high cGAS-STING activity and elevated levels of L1 expression. In this review, we discuss these interconnected pathways of L1 suppression and their role in the regulation of cGAS-STING and inflammation in disease.

cGAS-STING(环状GMP-AMP合成酶(cGAS)-干扰素基因刺激因子(STING))轴将DNA损伤和细胞应激与I型干扰素(IFN)信号整合,以促进炎症应激反应背后的转录变化。cGAS-STING途径以双链DNA、微核和长散布核元件1(L1)逆转录元件的形式对胞质DNA作出反应。L1逆转录酶元件是一类自繁殖的非长末端重复转座子,在哺乳动物基因组中保持高度活性。L1反转录因子正在成为cGAS-STING和IFN信号传导的重要诱导物,这些信号传导在包括癌症在内的多种疾病中通常失调。cGAS STING和L1活性的一个关键阻遏物是核酸外切酶三原修复核酸外切蛋白酶1(TREX1),TREX1的缺失促进L1的积累。此外,L1失调是通过cGAS-STING慢性诱导I型IFN信号传导的疾病的常见主题,如Aicardi-Goutières综合征、Fanconi贫血和皮肌炎。尽管TREX1在四足动物中高度保守,但存在其他抑制L1逆转录转座的抑制蛋白。这些抑制基因在突变时通常与以未经检查的炎症为特征的疾病有关,该炎症与高cGAS STING活性和L1表达水平升高有关。在这篇综述中,我们讨论了L1抑制的这些相互关联的途径及其在疾病中cGAS STING和炎症的调节中的作用。
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引用次数: 0
Modulating the immune system as a therapeutic target for myelodysplastic syndromes and acute myeloid leukemia. 调节免疫系统作为骨髓增生异常综合征和急性髓系白血病的治疗靶点。
IF 2.9 3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-12-01 Epub Date: 2023-08-11 DOI: 10.1139/bcb-2022-0374
Caroline M Putnam, Lahari Kondeti, Meredith B A Kesler, Melinda E Varney

Modulating the immune system to treat diseases, including myeloid malignancies, has resulted in the development of a multitude of novel therapeutics in recent years. Myelodysplastic syndromes or neoplasms (MDS) and acute myeloid leukemia (AML) are hematologic malignancies that arise from defects in hematopoietic stem and progenitor cells (HSPCs). Dysregulated immune responses, especially in innate immune and inflammatory pathways, are highly associated with the acquisition of HSPC defects in MDS and AML pathogenesis. In addition to utilizing the immune system in immunotherapeutic interventions such as chimeric antigen receptor T cell therapy, vaccines, and immune checkpoint inhibitors, mitigating dysregulation of innate immune and inflammatory responses in MDS and AML remains a priority in slowing the initiation and progression of these myeloid malignancies. This review provides a comprehensive summary of the current progress of diverse strategies to utilize or modulate the immune system in the treatment of MDS and AML.

近年来,通过调节免疫系统来治疗包括骨髓恶性肿瘤在内的疾病,开发了多种新的治疗方法。骨髓增生异常综合征或肿瘤(MDS)和急性髓系白血病(AML)是由造血干细胞和祖细胞(HSPCs)缺陷引起的血液系统恶性肿瘤。失调的免疫反应,特别是在先天免疫和炎症途径中,与MDS和AML发病机制中HSPC缺陷的获得高度相关。除了在免疫治疗干预(如嵌合抗原受体T细胞治疗、疫苗和免疫检查点抑制剂)中利用免疫系统外,缓解MDS和AML中先天免疫和炎症反应的失调仍然是减缓这些髓系恶性肿瘤发生和发展的优先事项。这篇综述全面总结了利用或调节免疫系统治疗MDS和AML的各种策略的当前进展。
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引用次数: 0
Correction: Protective effect of nitronyl nitroxide against hypoxia-induced damage in PC12 cells. 更正:硝基氮氧化物对PC12细胞缺氧损伤的保护作用。
IF 2.9 3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-12-01 Epub Date: 2023-11-24 DOI: 10.1139/bcb-2023-0321
Hongbo Luo, Wei Sun, Jin Shao, Huiping Ma, Zhengping Jia, Linlin Jing
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引用次数: 0
Time to treat the climate and nature crisis as one indivisible global health emergency. 是时候将气候和自然危机视为一个不可分割的全球卫生紧急事件。
IF 2.9 3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-12-01 DOI: 10.1139/bcb-2023-0329
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引用次数: 0
Automatic detection of Cryptosporidium in optical microscopy images using YOLOv5x: a comparative study. 使用YOLOv5x在光学显微镜图像中自动检测隐孢子虫:一项比较研究。
IF 2.9 3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-12-01 Epub Date: 2023-09-26 DOI: 10.1139/bcb-2023-0059
Johan Sebastian Lopez Salguero, Melissa Rodríguez Rendón, Jessica Triviño Valencia, Jorge Andrés Cuellar Gil, Carlos Andrés Naranjo Galvis, Oscar Moscoso Londoño, César Leandro Londoño Calderón, Fabio Augusto Gonzáles Osorio, Reinel Tabares Soto

Here, a machine learning tool (YOLOv5) enables the detection of Cryptosporidium microorganisms using optical and phase contrast microscope images. The two databases were processed using 520 images (optical microscopy) and 1200 images (phase contrast microscopy). It used Python libraries to label, standardize the size, and crop the images to generate the input tensors to the YOLOv5 network (s, m, and l). It implemented two experiments using randomly initialized weights in optical and phase contrast microscope images. The other two experiments used the parameters for the best training time obtained before and after retraining the models. Metrics used to assess model accuracy were mean average accuracy, confusion matrix, and the F1 scores. All three metrics confirmed that the optimal model used the best epoch of optical imaging training and retraining with phase contrast imaging. Experiments with randomly initialized weights with optical imaging showed the lowest precision for Cryptosporidium detection. The most stable model was YOLOv5m, with the best results in all categories. However, the differences between all models are lower than 2%, and YOLOv5s is the best option for Cryptosporidium detection considering the differences in computational costs of the models.

在这里,机器学习工具(YOLOv5)能够使用光学和相差显微镜图像检测隐孢子虫微生物。使用520张图像(光学显微镜)和1200张图像(相差显微镜)对这两个数据库进行处理。它使用Python库对图像进行标记、标准化大小和裁剪,以生成YOLOv5网络的输入张量(s、m和l)。它在光学和相差显微镜图像中使用随机初始化的权重进行了两个实验。另外两个实验使用了在重新训练模型之前和之后获得的最佳训练时间的参数。用于评估模型准确性的指标是平均准确性、混淆矩阵和F1分数。所有三个指标都证实,最优模型使用了光学成像训练和相位对比成像再训练的最佳时期。用光学成像随机初始化权重的实验显示隐孢子虫的检测精度最低。最稳定的模型是YOLOv5m,在所有类别中都有最好的结果。然而,所有模型之间的差异都低于2%,考虑到模型计算成本的差异,YOLOv5s是隐孢子虫检测的最佳选择。
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引用次数: 0
NDUFA4 promotes the progression of head and neck paraganglioma by inhibiting ferroptosis. NDUFA4通过抑制铁下垂促进头颈部副神经节瘤的进展。
IF 2.9 3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-12-01 Epub Date: 2023-08-21 DOI: 10.1139/bcb-2023-0018
Zhigang Wang, Erxing Tao, Yiming Chen, Qi Wang, Min Liu, Liang Wei, Siyi Xu, Wei Chen, Chunlong Zhong

NDUFA4 is a component of respiratory chain-oxidative phosphorylation pathway. NDUFA4 is highly expressed in tumor tissues, but little is known about the function of NDUFA4 in head and neck paraganglioma (HNPGL). We examined NDUFA4 expression in tissues from 10 HNPGL patients and 6 controls using qRT-PCR and Western blotting. NDUFA4 knockdown PGL-626 cells were established by using lentivirus infection and puromycin screening. Cell viability, ATP production, lipid reactive oxygen species, and mitochondrial membrane potential assays were performed to investigate the ferroptotic effects in NDUFA4 deficiency HNPGL cancer cells. Xenograft mouse model was created to detect the synergetic antitumor action between NDUFA4 deficiency and Metformin. NDUFA4 was upregulated in tumor tissues of HNPGL patients. NDUFA4 knockdown impaired the assembly of mitochondrial respiratory chain complexes and decreased the production of ATP and reduced cancer cell viability. Mechanistically, NDUFA4 knockdown increased cell ferroptosis, which further promoted Metformin-induced ferroptosis in PGL-626 cells. Therefore, NDUFA4 deficiency enhanced Metformin-mediated inhibition of the HNPGL progression in mice. In conclusion, NDUFA4 promotes the progression of HNPGL, and NDUFA4 knockdown enhances Metformin-mediated inhibition of the HNPGL progression in a mouse model.

NDUFA4是呼吸链-氧化磷酸化通路的一个组分。NDUFA4在肿瘤组织中高表达,但对其在头颈部副神经节瘤(HNPGL)中的功能知之甚少。我们使用qRT-PCR和Western blotting检测了10例HNPGL患者和6例对照组组织中NDUFA4的表达。通过慢病毒感染和嘌呤霉素筛选,建立NDUFA4敲低PGL-626细胞。通过细胞活力、ATP生成、脂质活性氧和线粒体膜电位测定来研究NDUFA4缺乏症对HNPGL癌细胞的致铁作用。建立异种移植小鼠模型,检测NDUFA4缺乏与二甲双胍的协同抗肿瘤作用。NDUFA4在HNPGL患者肿瘤组织中表达上调。NDUFA4敲低会破坏线粒体呼吸链复合物的组装,减少ATP的产生,降低癌细胞的活力。机制上,NDUFA4敲低增加了细胞铁下垂,进一步促进二甲双胍诱导的PGL-626细胞铁下垂。因此,NDUFA4缺乏增强了二甲双胍介导的小鼠HNPGL进展的抑制。综上所述,NDUFA4促进HNPGL的进展,NDUFA4敲低增强二甲双胍介导的对HNPGL进展的抑制。
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引用次数: 0
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