{"title":"List of Reviewers","authors":"M. Soler","doi":"10.1023/A:1017225409178","DOIUrl":"https://doi.org/10.1023/A:1017225409178","url":null,"abstract":"","PeriodicalId":88019,"journal":{"name":"Journal of VLSI signal processing systems for signal, image, and video technology","volume":"34 1","pages":"7"},"PeriodicalIF":0.0,"publicationDate":"2018-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"90366185","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2007-01-01DOI: 10.1007/s11265-007-0087-0
Praveen Krishnamurthy, Jeremy Buhler, Roger Chamberlain, Mark Franklin, Kwame Gyang, Arpith Jacob, Joseph Lancaster
Biosequence similarity search is an important application in modern molecular biology. Search algorithms aim to identify sets of sequences whose extensional similarity suggests a common evolutionary origin or function. The most widely used similarity search tool for biosequences is BLAST, a program designed to compare query sequences to a database. Here, we present the design of BLASTN, the version of BLAST that searches DNA sequences, on the Mercury system, an architecture that supports high-volume, high-throughput data movement off a data store and into reconfigurable hardware. An important component of application deployment on the Mercury system is the functional decomposition of the application onto both the reconfigurable hardware and the traditional processor. Both the Mercury BLASTN application design and its performance analysis are described.
{"title":"Biosequence Similarity Search on the Mercury System.","authors":"Praveen Krishnamurthy, Jeremy Buhler, Roger Chamberlain, Mark Franklin, Kwame Gyang, Arpith Jacob, Joseph Lancaster","doi":"10.1007/s11265-007-0087-0","DOIUrl":"https://doi.org/10.1007/s11265-007-0087-0","url":null,"abstract":"<p><p>Biosequence similarity search is an important application in modern molecular biology. Search algorithms aim to identify sets of sequences whose extensional similarity suggests a common evolutionary origin or function. The most widely used similarity search tool for biosequences is BLAST, a program designed to compare query sequences to a database. Here, we present the design of BLASTN, the version of BLAST that searches DNA sequences, on the Mercury system, an architecture that supports high-volume, high-throughput data movement off a data store and into reconfigurable hardware. An important component of application deployment on the Mercury system is the functional decomposition of the application onto both the reconfigurable hardware and the traditional processor. Both the Mercury BLASTN application design and its performance analysis are described.</p>","PeriodicalId":88019,"journal":{"name":"Journal of VLSI signal processing systems for signal, image, and video technology","volume":"49 1","pages":"101-121"},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/s11265-007-0087-0","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"27721821","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2006-12-01DOI: 10.1007/s11265-006-9762-9
K. Sarrigeorgidis, J. Rabaey
{"title":"A Scalable Configurable Architecture for Advanced Wireless Communication Algorithms","authors":"K. Sarrigeorgidis, J. Rabaey","doi":"10.1007/s11265-006-9762-9","DOIUrl":"https://doi.org/10.1007/s11265-006-9762-9","url":null,"abstract":"","PeriodicalId":88019,"journal":{"name":"Journal of VLSI signal processing systems for signal, image, and video technology","volume":"29 1","pages":"127-151"},"PeriodicalIF":0.0,"publicationDate":"2006-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"73611067","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2006-12-01DOI: 10.1007/s11265-006-9763-8
Sau-Gee Chen, J. Chih, Jun-Yi Chou
{"title":"Direct Digital Frequency Synthesis Based on a Two-Level Table-Lookup Scheme","authors":"Sau-Gee Chen, J. Chih, Jun-Yi Chou","doi":"10.1007/s11265-006-9763-8","DOIUrl":"https://doi.org/10.1007/s11265-006-9763-8","url":null,"abstract":"","PeriodicalId":88019,"journal":{"name":"Journal of VLSI signal processing systems for signal, image, and video technology","volume":"111 1","pages":"153-160"},"PeriodicalIF":0.0,"publicationDate":"2006-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"85917712","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2006-12-01DOI: 10.1007/s11265-006-9760-y
Yuan Xie, W. Hung
{"title":"Temperature-Aware Task Allocation and Scheduling for Embedded Multiprocessor Systems-on-Chip (MPSoC) Design","authors":"Yuan Xie, W. Hung","doi":"10.1007/s11265-006-9760-y","DOIUrl":"https://doi.org/10.1007/s11265-006-9760-y","url":null,"abstract":"","PeriodicalId":88019,"journal":{"name":"Journal of VLSI signal processing systems for signal, image, and video technology","volume":"306 1","pages":"177-189"},"PeriodicalIF":0.0,"publicationDate":"2006-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"77228954","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2006-12-01DOI: 10.1007/s11265-006-9764-7
G. Ruiz, J. A. Michell, A. Burón
{"title":"High Throughput Parallel-Pipeline 2-D DCT/IDCT Processor Chip","authors":"G. Ruiz, J. A. Michell, A. Burón","doi":"10.1007/s11265-006-9764-7","DOIUrl":"https://doi.org/10.1007/s11265-006-9764-7","url":null,"abstract":"","PeriodicalId":88019,"journal":{"name":"Journal of VLSI signal processing systems for signal, image, and video technology","volume":"53 1","pages":"161-175"},"PeriodicalIF":0.0,"publicationDate":"2006-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"73774280","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2006-11-01DOI: 10.1007/s11265-006-9773-6
A. Hegde, J. Príncipe, Deniz Erdoğmuş, U. Ozertem, Y. Rao, Hemanth Peddaneni
{"title":"Perturbation-Based Eigenvector Updates for On-Line Principal Components Analysis and Canonical Correlation Analysis","authors":"A. Hegde, J. Príncipe, Deniz Erdoğmuş, U. Ozertem, Y. Rao, Hemanth Peddaneni","doi":"10.1007/s11265-006-9773-6","DOIUrl":"https://doi.org/10.1007/s11265-006-9773-6","url":null,"abstract":"","PeriodicalId":88019,"journal":{"name":"Journal of VLSI signal processing systems for signal, image, and video technology","volume":"2015 1","pages":"85-95"},"PeriodicalIF":0.0,"publicationDate":"2006-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83165058","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2006-11-01DOI: 10.1007/s11265-006-9768-3
Parham Zolfaghari, H. Kato, Yasuhiro Minami, Atsushi Nakamura, S. Katagiri, R. Patterson
{"title":"Dynamic Assignment of Gaussian Components in Modelling Speech Spectra","authors":"Parham Zolfaghari, H. Kato, Yasuhiro Minami, Atsushi Nakamura, S. Katagiri, R. Patterson","doi":"10.1007/s11265-006-9768-3","DOIUrl":"https://doi.org/10.1007/s11265-006-9768-3","url":null,"abstract":"","PeriodicalId":88019,"journal":{"name":"Journal of VLSI signal processing systems for signal, image, and video technology","volume":"70 1","pages":"7-19"},"PeriodicalIF":0.0,"publicationDate":"2006-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"90721580","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2006-11-01DOI: 10.1007/s11265-006-9769-2
P. D. Frazier, M. Chouikha
{"title":"Effective Parametric Estimation of Non-Gaussian Autoregressive Moving Average Processes Exhibiting Noise with Impulses","authors":"P. D. Frazier, M. Chouikha","doi":"10.1007/s11265-006-9769-2","DOIUrl":"https://doi.org/10.1007/s11265-006-9769-2","url":null,"abstract":"","PeriodicalId":88019,"journal":{"name":"Journal of VLSI signal processing systems for signal, image, and video technology","volume":"72 2 1","pages":"21-28"},"PeriodicalIF":0.0,"publicationDate":"2006-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89173746","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2006-11-01DOI: 10.1007/s11265-006-9775-4
D. Obradovic, H. Lenz, Markus Schupfner
{"title":"Fusion of Map and Sensor Data in a Modern Car Navigation System","authors":"D. Obradovic, H. Lenz, Markus Schupfner","doi":"10.1007/s11265-006-9775-4","DOIUrl":"https://doi.org/10.1007/s11265-006-9775-4","url":null,"abstract":"","PeriodicalId":88019,"journal":{"name":"Journal of VLSI signal processing systems for signal, image, and video technology","volume":"2005 14","pages":"111-122"},"PeriodicalIF":0.0,"publicationDate":"2006-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"72618097","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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