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A strategy to comprehensively and quickly identify the chemical constituents in Wuteng tablets by ultra-high-performance liquid chromatography coupled to quadrupole time-of-flight mass spectrometry 利用超高效液相色谱-四极杆飞行时间质谱联用技术全面快速鉴定五丁片中化学成分的策略。
IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-21 DOI: 10.1002/bmc.6028
Pengyi Chen, Lincheng Bai, Xinyue Zheng, Mingtao Wang, Peiliang Dong, Hua Han

Population growth and improved industrialization have led to a sharp rise in the demand for plant medicine. In recent years, there has been a general concern about developing new medicinal resources, cutting down on pharmaceutical waste, and discovering new, effective components of traditional Chinese medicine. A novel medication called Wuteng tablets is made from Schisandra chinensis stems and shows promise as a treatment for Alzheimer's disease. This work is the first development of an overall identification technique based on ultra-high-performance liquid chromatography coupled to quadrupole time-of-flight mass spectrometry (UHPLC-Q/TOF-MS). Using the MS-DIAL integrated informatics platform and UNIFI software, the chemical components of Wuteng tablets were identified, and the amount of lignin in the tablets was ascertained. This study will identify the chemical components of such medications, aid in the development and utilization of medicinal plant resources, and serve as a foundation for the analysis of the components of their biopharmaceutical origin.

人口增长和工业化水平提高导致对植物药的需求急剧增加。近年来,人们普遍关注开发新的药用资源、减少药物浪费以及发现新的有效中药成分。一种名为 "五藤片 "的新型药物由五味子茎制成,有望治疗老年痴呆症。这项研究首次开发了基于超高效液相色谱-四极杆飞行时间质谱(UHPLC-Q/TOF-MS)的整体鉴定技术。利用 MS-DIAL 集成信息平台和 UNIFI 软件,对五丁片中的化学成分进行了鉴定,并确定了五丁片中木质素的含量。这项研究将确定此类药物的化学成分,有助于药用植物资源的开发和利用,并为分析其生物药源成分奠定基础。
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引用次数: 0
Establishing a multi-method approach for unprecedented detection and quantification of 13 genotoxic impurities (GTIs) in Apixaban drug substance through ultra-performance liquid chromatography (UPLC) 通过超高效液相色谱法(UPLC),建立一种前所未有的多方法检测和定量阿哌沙班药物中 13 种基因毒性杂质(GTIs)的方法。
IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-12 DOI: 10.1002/bmc.6027
Sivaprasadu Ganta, Muralidhar Pamerla, Suresh Kumar Gunupuru, Suresh Salakolusu, Samatha Bevara, Harihara Padhy, Ravi Kumar Ganta

This groundbreaking study introduces a pioneering development of multi-method approach for the first-ever detection and quantification of 13 genotoxic impurities (GTIs) in Apixaban (Apx) drug substance using ultra-performance liquid chromatography (UPLC) with ultraviolet (UV) detector. In this novel endeavor, two distinct UPLC-UV methods, Method A (for impurities A to G) and Method B (for impurities H to M), were meticulously developed and validated as per International Council for Harmonization (ICH) guidelines to address the challenge of identification and control of 13 GTIs in Apx drug substance. The validation process included rigorous assessment of linearity, accuracy, specificity, precision, limit of quantification (LOQ), and limit of detection (LOD) for each impurity in each method which marks a significant advancement in pharmaceutical analysis. The developed methods address the regulatory requirements set forth by ICH M7(R2) guidelines by providing a reliable approach for quantifying GTIs in Apx drug substance at trace levels to minimize the potential carcinogenic risk to the patients.

这项开创性的研究首次采用超高效液相色谱法(UPLC)和紫外检测器,对阿哌沙班(Apx)药物中的 13 种基因毒性杂质(GTIs)进行多方法检测和定量。在这一新颖的尝试中,根据国际协调理事会(ICH)的指导方针,精心开发并验证了两种不同的超高效液相色谱-紫外检测方法,即方法 A(检测杂质 A 至 G)和方法 B(检测杂质 H 至 M),以应对阿哌沙班药物中 13 种 GTI 的鉴定和控制挑战。验证过程包括严格评估每种方法中每种杂质的线性度、准确度、特异性、精确度、定量限 (LOQ) 和检测限 (LOD),这标志着药物分析领域的一大进步。所开发的方法满足了 ICH M7(R2) 指南提出的监管要求,提供了一种可靠的方法,可对 Apx 药物中的 GTIs 进行痕量定量,从而最大限度地降低对患者的潜在致癌风险。
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引用次数: 0
Huangqi-Guizhi-Wuwutang protects against oligospermia in mice by promoting the proliferation of spermatogenic stem cells: A comprehensive study using HPLC-Q-TOF/MS and experimental pharmacology 黄芪桂枝五物汤通过促进生精干细胞增殖预防小鼠少精症:利用HPLC-Q-TOF/MS和实验药理学进行综合研究。
IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-11 DOI: 10.1002/bmc.6023
Yuan Zhao, Jinru Wu, Xiangbin Li, Lin Zheng, Qiugu Chen, Shangbin Zhang, Jianping Chen

The classical traditional Chinese medicine formula Huangqi-Guizhi-Wuwutang (HGW) has been shown to enhance sperm production. However, the bioactive components and comprehensive mechanisms underlying the therapeutic effects remain unclear. The present study investigates the potential active ingredients and underlying mechanisms of HGW against spermatogenesis dysfunction. The chemical components of HGW were analyzed by mass spectrometry. And then the “components-targets-pathway-disease” network was constructed using network pharmacology research methods, which aimed to identify the key active components and potential targets of HGW in treating oligospermia. Experimental validation was finally conducted in animal model. The male-specific pathogen-free Kunming mice were divided into five groups: Sham group, Model group, and HGW groups (8, 16, and 32 g/kg of HGW by gavage for 35 days). Chemical profile and network pharmacology results revealed that potential bioactive compounds were dihydrocinnacasside, isomucronulatol, and 6-gingerol, and the mechanism of which was enriched in regulating spermatogenic stem cells (SSCs), endocrine function, and apoptosis. The administration of HGW significantly improved oligospermia in mice. HGW significantly upregulated the expression of marker proteins in SSCs and the potential targets within the testis simultaneously. Our data indicates that HGW enhances the proliferation of SSCs, and HGW can be a promising therapeutic candidate for oligospermia.

经典中药配方黄芪桂枝五物汤(HGW)已被证明可提高精子生成。然而,其生物活性成分和综合治疗机制仍不清楚。本研究探讨了 HGW 治疗生精功能障碍的潜在活性成分和内在机制。本研究采用质谱法分析了 HGW 的化学成分。然后利用网络药理学研究方法构建了 "成分-靶点-通路-疾病 "网络,旨在确定HGW治疗少精症的关键活性成分和潜在靶点。最后在动物模型中进行了实验验证。将雄性特异性无病原体昆明小鼠分为五组:假阴性组、模型组和 HGW 组(8、16 和 32 克/千克 HGW 灌胃,连续 35 天)。化学特征和网络药理学结果表明,潜在的生物活性化合物为二氢辛那西苷、异桉叶油醇和6-姜醇,其作用机制主要是调节生精干细胞(SSCs)、内分泌功能和细胞凋亡。服用 HGW 能明显改善小鼠的少精症。HGW能同时明显提高SSCs和睾丸内潜在靶点的标志蛋白表达。我们的数据表明,HGW 可促进造血干细胞的增殖,是治疗少精症的有效候选药物。
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引用次数: 0
Screening immunomodulatory Q-markers in Astragali Radix based on UHPLC-QTOF-MS analysis and spectrum–effect relationship 基于超高效液相色谱-质谱-质谱分析和谱效关系筛选黄芪中的免疫调节Q标记物
IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-10 DOI: 10.1002/bmc.6015
Qin Chen, Ping Chen, Chunmei Bi, Xue Shen, Lirong Guo, Yihan Jiang, Yanan Liu, Yangyang Wu, Yimeng Li, Zhengrong Wu, Xujiang Zhu, Pingshun Song, Pingrong Yang, Yawen Zhang, Zhigang Yang

Astragali Radix (AR) is one of the famous traditional Chinese medicines (TCMs) for boosting immunity, whereas the quality markers (Q-markers) of AR have not been clearly researched. The immunomodulatory activities of the bioactive extractions and components were evaluated by NO inhibition rate; phagocytic index; IL-10, TNF-α, IL-1β, and IL-6 cytokines in RAW264.7 cells; and the relative proliferation rate of spleen cells. The total saponins (TS) and the grade 2 (Xiaoxuan, XX) of AR showed the strongest immunomodulatory activities. At the concentration of 40 μg/mL, the TS increased spleen cells proliferation by 48.0% and upregulated the level of IL-1β and IL-6. Cytokines in the XX-treated group were at least 1.6 times higher than the control group. A total of 190 common peaks were detected in AR by ultrahigh-performance liquid chromatography coupled with quadrupole-time-of-flight mass spectrometry (UHPLC-QTOF-MS). The multivariate statistical analyses revealed that 41 compounds were positively correlated with immune responses, and bioactive compounds were verified by using RAW264.7 cell assay. Subsequently, the contents of six compounds in different commercial grades were determined, and the results showed the same trend in contents and activities. Finally, calycosin-7-O-β-D-glucoside, astragaloside IV, astragaloside II, astragaloside I, isomucronulatol-7-O-glucoside, and 9,10-dimethoxypterocarpan-3-O-glucoside were screened out as immunomodulatory Q-markers of AR.

黄芪(AR)是提高免疫力的著名中药之一,但其质量指标(Q-markers)尚未得到明确研究。本研究通过NO抑制率、吞噬细胞指数、RAW264.7细胞中IL-10、TNF-α、IL-1β和IL-6细胞因子以及脾脏细胞相对增殖率等指标来评价生物活性提取物和成分的免疫调节活性。AR 的总皂苷(TS)和 2 级皂苷(小皂苷,XX)显示出最强的免疫调节活性。当浓度为 40 μg/mL 时,TS 能使脾细胞的增殖率提高 48.0%,并能上调 IL-1β 和 IL-6 的水平。XX处理组的细胞因子水平至少是对照组的1.6倍。超高效液相色谱-四极杆飞行时间质谱(UHPLC-QTOF-MS)共检测到 AR 中的 190 个常见峰。多元统计分析显示,有 41 种化合物与免疫反应呈正相关,并通过 RAW264.7 细胞实验验证了这些化合物的生物活性。随后,测定了不同商品等级中六种化合物的含量,结果显示含量和活性呈相同趋势。最后,筛选出萼片苷-7-O-β-D-葡萄糖苷、黄芪皂苷Ⅳ、黄芪皂苷Ⅱ、黄芪皂苷Ⅰ、异桉叶油醇-7-O-葡萄糖苷和 9,10-二甲氧基紫檀素-3-O-葡萄糖苷作为 AR 的免疫调节 Q 标记。
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引用次数: 0
Identification and in vitro genotoxicity assessment of forced degradation products of glimepiride and glyburide using HEK cell-based COMET assay 利用基于 HEK 细胞的 COMET 试验鉴定格列美脲和甘布脲的强制降解产物并进行体外遗传毒性评估。
IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-10 DOI: 10.1002/bmc.6025
Riya Jain, Dande Aishwarya, Shrutika Wankhade,  Anupriya, Murali Kumarasamy, Ramalingam Peraman

This study focuses on characterizing the forced degradation products of antidiabetic drugs glimepiride (GMD) and glyburide (GBD), with previously unexplored genotoxicity. Drugs underwent stress induced by acid, base, and hydrogen peroxide. For GMD, impurities were profiled and isolated using Hypersil Gold C8 (250 × 10 mm, 5 μ) through semi-preparative HPLC with a fraction collector. For GBD, impurity profiling was performed using semi-preparative HPLC (Hypersil GOLD C18, 250 × 10 mm, 5 μ), and reverse-phase flash chromatography (FP ECOFLEX C18 4 g column) for isolation. Although five GMD and three GBD impurities were detected, only three GMD and two GBD impurities were separated and assessed for purity using analytical RP-HPLC with the purity percentages ranging from 96.6% to 99.9%. LC-Orbitrap MS was used to identify these three GMD impurities (m/z: 408.122, 338.340, 381.160) and two GBD impurities (m/z: 369.065, 325.283). ProTox-II in silico predictions classified all impurities as class 4 and 5, with no positive genotoxicity indications. In vitro comet assays, using HEK cells, indicated that for GMD, impurity 2 and impurity 5 were less genotoxic, whereas impurity 4 exhibited genotoxicity. For GBD, both impurities 1 and 3 were found to be genotoxic, with impurity 3 showing a higher level of genotoxicity than impurity 1.

本研究的重点是分析抗糖尿病药物格列美脲(GMD)和甘布脲(GBD)的强制降解产物的特征,这些降解产物具有以前未曾探索过的遗传毒性。药物在酸、碱和过氧化氢的作用下发生了应激反应。对于 GMD,使用 Hypersil Gold C8(250 × 10 mm,5 μ)和馏分收集器通过半制备 HPLC 分析和分离杂质。对于 GBD,使用半制备高效液相色谱(Hypersil GOLD C18,250 × 10 mm,5 μ)进行杂质分析,并使用反相闪蒸色谱(FP ECOFLEX C18 4 g 色谱柱)进行分离。虽然检测到了 5 个 GMD 和 3 个 GBD 杂质,但只有 3 个 GMD 和 2 个 GBD 杂质被分离出来,并使用分析型 RP-HPLC 进行了纯度评估,纯度范围为 96.6% 至 99.9%。LC-Orbitrap MS 用于鉴定这三种 GMD 杂质(m/z:408.122、338.340、381.160)和两种 GBD 杂质(m/z:369.065、325.283)。ProTox-II 硅预测将所有杂质划分为 4 级和 5 级,没有阳性遗传毒性指标。使用 HEK 细胞进行的体外彗星试验表明,对于 GMD,杂质 2 和杂质 5 的遗传毒性较低,而杂质 4 则具有遗传毒性。对于 GBD,杂质 1 和 3 都具有基因毒性,其中杂质 3 的基因毒性高于杂质 1。
{"title":"Identification and in vitro genotoxicity assessment of forced degradation products of glimepiride and glyburide using HEK cell-based COMET assay","authors":"Riya Jain,&nbsp;Dande Aishwarya,&nbsp;Shrutika Wankhade,&nbsp; Anupriya,&nbsp;Murali Kumarasamy,&nbsp;Ramalingam Peraman","doi":"10.1002/bmc.6025","DOIUrl":"10.1002/bmc.6025","url":null,"abstract":"<p>This study focuses on characterizing the forced degradation products of antidiabetic drugs glimepiride (GMD) and glyburide (GBD), with previously unexplored genotoxicity. Drugs underwent stress induced by acid, base, and hydrogen peroxide. For GMD, impurities were profiled and isolated using Hypersil Gold C8 (250 × 10 mm, 5 μ) through semi-preparative HPLC with a fraction collector. For GBD, impurity profiling was performed using semi-preparative HPLC (Hypersil GOLD C18, 250 × 10 mm, 5 μ), and reverse-phase flash chromatography (FP ECOFLEX C18 4 g column) for isolation. Although five GMD and three GBD impurities were detected, only three GMD and two GBD impurities were separated and assessed for purity using analytical RP-HPLC with the purity percentages ranging from 96.6% to 99.9%. LC-Orbitrap MS was used to identify these three GMD impurities (m/z: 408.122, 338.340, 381.160) and two GBD impurities (m/z: 369.065, 325.283). ProTox-II in silico predictions classified all impurities as class 4 and 5, with no positive genotoxicity indications. In vitro comet assays, using HEK cells, indicated that for GMD, impurity 2 and impurity 5 were less genotoxic, whereas impurity 4 exhibited genotoxicity. For GBD, both impurities 1 and 3 were found to be genotoxic, with impurity 3 showing a higher level of genotoxicity than impurity 1.</p>","PeriodicalId":8861,"journal":{"name":"Biomedical Chromatography","volume":"38 12","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142387617","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development of a rapid and robust hydrop interaction liquid chromatography tandem mass spectrometry method for the detection of 13 endogenous amino acids as well as trimethylamine oxide in serum and tissues of the mice 开发一种快速、稳健的液相色谱串联质谱法,用于检测小鼠血清和组织中的 13 种内源性氨基酸以及氧化三甲胺。
IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-10 DOI: 10.1002/bmc.6010
Didi Hu, Xudong Liu, Ying Yao, Shijie Wei, Hongyan Ji, Yang Yang, Jing Chen, Linwei Chen

This work aimed to establish an HILIC-MS/MS method to simultaneously determine the levels of 13 endogenous amino acids and trimethylamine oxide in the biological samples from the mice. Electrospray ion source was used for the analysis of mass spectrometry. The 20 min separation was applied in a Dikma Inspire Hilic column (2.1 × 100.0 mm, 3 μM). Positive ion mode under an MRM model gave a satisfying response value. The limits of quantitation were evaluated by accuracy from −12.59% to 7.89% and precision from 1.77% to 14.00% as well as acceptable interday and intraday precision, matrix effect, recovery, and stability. Later, the assay was successfully used to measure the concentrations of the determinands in the biological samples. Individual and tissue distribution differences for these metabolites were observable. The amino acids had a consistent highest content in the spleens, while the lowest levels were found in the livers. Alanine was the most abundant amino acid in the serum, and taurine kept the highest content in all of the tissues. Trimethylamine oxide remained low level, especially in the liver samples.

本研究旨在建立一种 HILIC-MS/MS 方法,以同时测定小鼠生物样本中 13 种内源性氨基酸和氧化三甲胺的含量。质谱分析采用电喷雾离子源。采用 Dikma Inspire Hilic 色谱柱(2.1 × 100.0 mm,3 μM),分离时间为 20 分钟。在 MRM 模式下,正离子模式的响应值令人满意。定量限的准确度为-12.59%至7.89%,精密度为1.77%至14.00%,日间和日内精密度、基质效应、回收率和稳定性均可接受。随后,该测定法被成功地用于测量生物样本中决定因子的浓度。可以观察到这些代谢物的个体差异和组织分布差异。氨基酸在脾脏中的含量始终最高,而在肝脏中的含量最低。丙氨酸是血清中含量最高的氨基酸,牛磺酸在所有组织中的含量都最高。三甲胺氧化物的含量仍然很低,尤其是在肝脏样本中。
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引用次数: 0
Quantitation of the DNA-dependent protein kinase inhibitor peposertib (M3814) and metabolite in human plasma by LC–MS/MS 利用 LC-MS/MS 对人体血浆中的 DNA 依赖性蛋白激酶抑制剂 peposertib (M3814) 及其代谢物进行定量分析。
IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-08 DOI: 10.1002/bmc.6024
Susan M. Christner, Robert A. Parise, Christopher J. Bakkenist, S. Lindsey Davis, Ye Feng, Timothy Synold, Steven Gore, Jan H. Beumer

The DNA-dependent protein kinase (DNA-PK) is an abundant nuclear protein that mediates DNA double-strand break repair by nonhomologous end joining (NHEJ). As such, DNA-PK is critical for V(D)J recombination in lymphocytes and for survival in cells exposed to ionizing radiation and clastogens. Peposertib (M3814) is a small molecule DNA-PK inhibitor currently in preclinical and clinical development for cancer treatment. We have developed a high-performance liquid chromatography-mass spectrometry method for quantitating peposertib and its metabolite in 0.1 mL human plasma. After MTBE liquid–liquid extraction, chromatographic separation was achieved with a Phenomenex Synergi polar reverse phase (4 μm, 2 × 50 mm) column and a gradient of 0.1% formic acid in acetonitrile and water over an 8 min run time. Mass spectrometric detection was performed on an ABI SCIEX 4000 with electrospray, positive-mode ionization. The assay was linear from 10 to 3000 ng/mL for peposertib and 1–300 ng/mL for the metabolite and proved to be both accurate (97.3%–103.7%) and precise (<8.9%CV) fulfilling criteria from the Food and Drug Administration (FDA) guidance on bioanalytical method validation. This liquid chromatography-tandem mass spectroscopy (LC–MS/MS) assay will support several ongoing clinical studies by defining peposertib pharmacokinetics.

DNA依赖性蛋白激酶(DNA-PK)是一种丰富的核蛋白,通过非同源末端连接(NHEJ)介导DNA双链断裂修复。因此,DNA-PK 对淋巴细胞中的 V(D)J 重组以及暴露于电离辐射和凝集素的细胞的存活至关重要。Peposertib(M3814)是一种小分子 DNA-PK 抑制剂,目前正处于癌症治疗的临床前和临床开发阶段。我们开发了一种高效液相色谱-质谱法,用于定量检测 0.1 mL 人体血浆中的培泊色替布及其代谢物。样品经 MTBE 液-液萃取后,采用 Phenomenex Synergi 极性反相色谱柱(4 μm,2 × 50 mm),以 0.1% 甲酸溶于乙腈和水为梯度,在 8 分钟内完成色谱分离。质谱检测采用 ABI SCIEX 4000 型电喷雾正离子模式。培泊色替布和代谢物的检测结果在 10 至 3000 纳克/毫升和 1-300 纳克/毫升之间呈线性关系,准确度(97.3%-103.7%)和精密度(97.3%-103.7%)均符合美国食品药品管理局(FDA)的标准。
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引用次数: 0
Bone and periosteum protein analysis via tandem mass tag quantitative proteomics in pediatric patients with osteomyelitis 通过串联质量标记定量蛋白质组学分析小儿骨髓炎患者的骨和骨膜蛋白质。
IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-08 DOI: 10.1002/bmc.5999
Xinwu Wu, Peisheng Chen, Dianhua Huang, Yuchen Pan, Shunyou Chen

Bone healing is crucial in managing osteomyelitis after fracture fixation. Understanding the mechanism of extensive callus formation in pediatric osteomyelitis is highly important. This study aims to analyze bone and periosteum samples from pediatric patients to elucidate the essential processes involved in callus formation during osteomyelitis. The study included eight patients from our hospital: four with positive microbial culture who underwent osteomyelitis debridement and four who had osteotomy surgery as contral. We used tandem mass tag quantitative proteomics to investigate proteomic changes in bone and periosteum tissues obtained from these patients. Differential expression proteins were analyzed for their pathways through Gene Ontology (GO) annotation, GO enrichment analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis, and protein–protein interaction networks. A total of 4737 proteins were successfully identified. About 2224 differentially expressed proteins were detected in the bone tissues group and periosteum tissues group. Among the differentially expressed proteins, 10 protein genes in the bone group were associated with inflammation and osteogenesis, while in the periosteum group were nine. Cytochrome b-245, beta polypeptide (CYBB), nicotinamide phosphoribosyltransferase (NAMPT), tissue inhibitor of metalloproteinases 1 (TIMP-1), Raf-1 proto-oncogene, serine/threonine kinase (RAF-1), RELA proto-oncogene, NF-KB subunit (RELA), and sphingomyelin synthase 2 (SGMS2) may play an important role in callus formation in patients with osteomyelitis. This study provides novel clues for understanding callus formation in pediatric patients with osteomyelitis.

骨愈合是治疗骨折固定后骨髓炎的关键。了解小儿骨髓炎中广泛胼胝形成的机制非常重要。本研究旨在分析儿科患者的骨和骨膜样本,以阐明骨髓炎期间胼胝形成的基本过程。研究对象包括本院的八名患者:四名接受骨髓炎清创术的微生物培养阳性患者和四名接受截骨手术的对照组患者。我们使用串联质量标签定量蛋白质组学研究了这些患者骨和骨膜组织的蛋白质组变化。通过基因本体(GO)注释、GO富集分析、京都基因和基因组百科全书(KEGG)富集分析以及蛋白-蛋白相互作用网络分析了差异表达蛋白的通路。共成功鉴定了 4737 个蛋白质。在骨组织组和骨膜组织组中发现了约 2224 个差异表达蛋白。在差异表达的蛋白质中,骨组织组有 10 个蛋白质基因与炎症和成骨相关,而骨膜组则有 9 个。细胞色素b-245β多肽(CYBB)、烟酰胺磷酸核糖转移酶(NAMPT)、金属蛋白酶组织抑制剂1(TIMP-1)、Raf-1原癌基因、丝氨酸/苏氨酸激酶(RAF-1)、RELA原癌基因、NF-KB亚基(RELA)和鞘磷脂合成酶2(SGMS2)可能在骨髓炎患者胼胝体形成过程中发挥重要作用。这项研究为了解小儿骨髓炎患者胼胝的形成提供了新的线索。
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引用次数: 0
Advances in mass spectrometry for metabolomics: Strategies, challenges, and innovations in disease biomarker discovery 用于代谢组学的质谱技术的进展:疾病生物标记物发现的战略、挑战和创新。
IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-07 DOI: 10.1002/bmc.6019
Nikhil Titkare, Sachin Chaturvedi, Sapan Borah, Nitish Sharma

Mass spectrometry (MS) plays a crucial role in metabolomics, especially in the discovery of disease biomarkers. This review outlines strategies for identifying metabolites, emphasizing precise and detailed use of MS techniques. It explores various methods for quantification, discusses challenges encountered, and examines recent breakthroughs in biomarker discovery. In the field of diagnostics, MS has revolutionized approaches by enabling a deeper understanding of tissue-specific metabolic changes associated with disease. The reliability of results is ensured through robust experimental design and stringent system suitability criteria. In the past, data quality, standardization, and reproducibility were often overlooked despite their significant impact on MS-based metabolomics. Progress in this field heavily depends on continuous training and education. The review also highlights the emergence of innovative MS technologies and methodologies. MS has the potential to transform our understanding of metabolic landscapes, which is crucial for disease biomarker discovery. This article serves as an invaluable resource for researchers in metabolomics, presenting fresh perspectives and advancements that propels the field forward.

质谱(MS)在代谢组学,尤其是疾病生物标志物的发现中发挥着至关重要的作用。这篇综述概述了鉴定代谢物的策略,强调了质谱技术的精确和详细使用。它探讨了各种量化方法,讨论了遇到的挑战,并研究了生物标记物发现方面的最新突破。在诊断领域,质谱技术使人们能够更深入地了解与疾病相关的组织特异性代谢变化,从而彻底改变了诊断方法。稳健的实验设计和严格的系统适用性标准确保了实验结果的可靠性。过去,数据质量、标准化和可重复性往往被忽视,尽管它们对基于 MS 的代谢组学有重大影响。这一领域的进步在很大程度上取决于持续的培训和教育。综述还强调了创新性 MS 技术和方法的出现。MS 有可能改变我们对代谢景观的理解,这对疾病生物标记物的发现至关重要。这篇文章是代谢组学研究人员的宝贵资源,提出了推动该领域发展的新观点和新进展。
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引用次数: 0
Identification of the metabolites of nimbolide in rat by liquid chromatography combined with quadrupole/orbitrap mass spectrometry 利用液相色谱法结合四极杆/比特质谱法鉴定大鼠体内的宁波里德代谢物。
IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-04 DOI: 10.1002/bmc.6012
Kun Li, Lingling Jiang, Yubao Wei, Zeyun Li

Nimbolide is a major furanoid compound isolated from Azadirachta indica. The aim of this study was to characterize the metabolites of nimbolide in rats and to propose the metabolic pathways. The metabolites were generated by incubating nimbolide (10 μM) with rat liver microsomes, nicotinamide adenine dinucleotide phosphate (NADPH), and nucleophiles (glutathione [GSH] or N-acetyl-lysine [NAL]) at 37°C for 60 min. For the in vivo study, nimbolide was intravenously administered to rats at a single dose of 10 mg/kg, and the bile and urine were collected. The metabolites were identified by ultra-high-performance liquid chromatography-quadrupole/orbitrap mass spectrometry (UPLC-Q/Orbitrap-MS) using electrospray ionization in positive ion mode. Totally, nine metabolites were detected, and their identities were characterized by accurate MS and MS/MS data. In GSH-supplemented liver microsomes, GSH conjugation was the primary elimination pathway. The furan ring was bioactivated into cis-butene-1,4-dial that can be trapped by GSH. In NAL-supplemented liver microsomes, two NAL conjugates (M4 and M5) derived from cis-butene-1,4-dial were observed. In rat bile and urine, N-acetyl-cysteine, cysteine-glycine, and GSH conjugate were also found. The current study provides an overview of the metabolism and the bioactivation profiles of nimbolide in rats, which aids in understanding its safety and activity.

Nimbolide 是一种从 Azadirachta indica 中分离出来的主要呋喃类化合物。本研究的目的是鉴定大鼠体内宁波里德代谢物的特征,并提出代谢途径。在 37°C 下,将宁博利内酯(10 μM)与大鼠肝脏微粒体、烟酰胺腺嘌呤二核苷酸磷酸酯(NADPH)和亲核物(谷胱甘肽[GSH]或 N-乙酰基赖氨酸[NAL])孵育 60 分钟,即可产生代谢物。在体内研究中,给大鼠静脉注射宁波利内酯,单次剂量为 10 毫克/千克,然后收集胆汁和尿液。代谢物采用电喷雾正离子模式下的超高效液相色谱-四极杆/比特阱质谱(UPLC-Q/Orbitrap-MS)进行鉴定。共检测到九种代谢物,并通过精确的 MS 和 MS/MS 数据确定了它们的特征。在补充了 GSH 的肝脏微粒体中,GSH 结合是主要的消除途径。呋喃环被生物活化为可被 GSH 捕获的顺式-1,4-丁烯二醇。在添加了 NAL 的肝脏微粒体中,可以观察到由顺式丁烯-1,4-二酮衍生出的两种 NAL 共轭物(M4 和 M5)。在大鼠胆汁和尿液中也发现了 N-乙酰-半胱氨酸、半胱氨酸-甘氨酸和 GSH 结合物。本研究概述了宁波里德在大鼠体内的代谢和生物活化情况,有助于了解其安全性和活性。
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Biomedical Chromatography
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