Pub Date : 2026-01-02DOI: 10.1186/s12938-025-01508-z
Bahadır Çokçetin, Muhammed Kürşad Uçar
This systematic review examines the effectiveness of physiological biometric signals in authentication and recognition systems by analyzing studies published between 2018 and 2023. Specifically, different biometric modalities (e.g., ECG, EEG, and PPG), commonly used datasets, signal processing techniques, and classification approaches are evaluated to assess their reported reliability and performance. In addition, the performance of multimodal biometric systems is compared with that of unimodal approaches. The review was conducted in accordance with the PRISMA 2020 guidelines. Relevant studies published between 2018 and 2023 were systematically retrieved from major databases, including EBSCO, PubMed, IEEE Xplore, Scopus, and Web of Science. A total of 2,064 records were initially identified, and after duplicate removal and eligibility screening, 80 articles were included in the final review. The study selection process is summarized using a PRISMA flow diagram. The reviewed studies indicate that ECG-based authentication systems report high average accuracy (98.6%), while multimodal biometric systems generally achieve accuracy levels exceeding 99%. Across modalities, deep learning-based approaches tend to outperform traditional machine learning methods. Dataset size and the choice of signal processing techniques were also found to influence reported performance outcomes. Overall, the findings suggest that biometric signal-based authentication systems demonstrate strong performance under the evaluation conditions reported in the literature. Multimodal fusion and deep learning approaches appear particularly promising, although reported results vary across datasets and protocols. Future research should prioritize larger and more diverse datasets, standardized evaluation benchmarks, and optimized signal processing pipelines to improve comparability and real-world applicability. Further studies on the integration of complementary biometric signals are also warranted.
本系统综述通过分析2018年至2023年间发表的研究,考察了生理生物特征信号在身份验证和识别系统中的有效性。具体来说,不同的生物识别模式(例如,ECG, EEG和PPG),常用的数据集,信号处理技术和分类方法进行评估,以评估其报告的可靠性和性能。此外,还比较了多模态生物识别系统与单模态生物识别系统的性能。该审查是根据PRISMA 2020指南进行的。系统检索EBSCO、PubMed、IEEE explore、Scopus和Web of Science等主要数据库中2018 - 2023年间发表的相关研究。最初共确定了2064条记录,经过重复删除和资格筛选,80篇文章被纳入最终审查。研究选择过程用PRISMA流程图进行总结。回顾的研究表明,基于脑电图的认证系统报告了较高的平均准确率(98.6%),而多模式生物识别系统通常达到超过99%的准确率水平。在各种模式中,基于深度学习的方法往往优于传统的机器学习方法。数据集大小和信号处理技术的选择也会影响报告的性能结果。总体而言,研究结果表明,基于生物识别信号的认证系统在文献中报道的评估条件下表现出强大的性能。多模态融合和深度学习方法似乎特别有前途,尽管报告的结果因数据集和协议而异。未来的研究应优先考虑更大、更多样化的数据集、标准化的评估基准和优化的信号处理管道,以提高可比性和现实世界的适用性。进一步研究互补生物特征信号的整合也是必要的。
{"title":"A PRISMA-based systematic review on advances in identity recognition and authentication using human biometric signals (2018-2023).","authors":"Bahadır Çokçetin, Muhammed Kürşad Uçar","doi":"10.1186/s12938-025-01508-z","DOIUrl":"10.1186/s12938-025-01508-z","url":null,"abstract":"<p><p>This systematic review examines the effectiveness of physiological biometric signals in authentication and recognition systems by analyzing studies published between 2018 and 2023. Specifically, different biometric modalities (e.g., ECG, EEG, and PPG), commonly used datasets, signal processing techniques, and classification approaches are evaluated to assess their reported reliability and performance. In addition, the performance of multimodal biometric systems is compared with that of unimodal approaches. The review was conducted in accordance with the PRISMA 2020 guidelines. Relevant studies published between 2018 and 2023 were systematically retrieved from major databases, including EBSCO, PubMed, IEEE Xplore, Scopus, and Web of Science. A total of 2,064 records were initially identified, and after duplicate removal and eligibility screening, 80 articles were included in the final review. The study selection process is summarized using a PRISMA flow diagram. The reviewed studies indicate that ECG-based authentication systems report high average accuracy (98.6%), while multimodal biometric systems generally achieve accuracy levels exceeding 99%. Across modalities, deep learning-based approaches tend to outperform traditional machine learning methods. Dataset size and the choice of signal processing techniques were also found to influence reported performance outcomes. Overall, the findings suggest that biometric signal-based authentication systems demonstrate strong performance under the evaluation conditions reported in the literature. Multimodal fusion and deep learning approaches appear particularly promising, although reported results vary across datasets and protocols. Future research should prioritize larger and more diverse datasets, standardized evaluation benchmarks, and optimized signal processing pipelines to improve comparability and real-world applicability. Further studies on the integration of complementary biometric signals are also warranted.</p>","PeriodicalId":8927,"journal":{"name":"BioMedical Engineering OnLine","volume":" ","pages":"18"},"PeriodicalIF":2.9,"publicationDate":"2026-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12866188/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145896071","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-30DOI: 10.1186/s12938-025-01450-0
Hugo George Rowland, Marcela Ferrer Molina, Tawfiq Hijazi Alsadi, Susana Muwaquet Rodriguez
Introduction: Dental autotransplantation (DAT) is a surgical procedure used to replace hopeless or missing teeth. The technique entails the purposeful extraction of a desired sound tooth, which is then implanted into another alveolar site of the same oral cavity.
Objectives: To analyse the survival rates and success rates of DAT in relation to donor teeth with an incomplete root development (open apex) and complete root formation (closed apex). Additionally, it attempts to evaluate the prognostic components of DAT with infection-related (inflammatory) root resorption, ankylosis, and pulpal necrosis complications.
Materials and methods: An electronic search was conducted using EBSCO MEDLINE Web of Science, Scopus and Cochrane databases from January 2014 until November 2024. The selected articles were chosen within the parameters outlined in the Materials and Statistical Methodology section. The addressed PICO question "does the stage of the donor tooth's root development affect the long-standing prognosis and clinical outcomes of dental autotransplantation?".
Results: The final 26 articles featured a total of 2837 transplanted teeth: 2192 donor teeth with an open apex and 645 donor teeth with a closed apex. The overall survival rate was 93.8% in the open apex group and 92.6% in the closed apex group. Success rate was 84.0% in the open apex group and 86.7% in the closed apex group. The rate of infection-related root resorption was 6.3% in the open apex group and 5.9% in the closed apex group. The rate of ankylosis was 4.4% in the open apex group and 6.7% in the closed apex group. The rate of pulp necrosis was 6.4% in the open apex group. No factors were identified as influencing the rate of pulp necrosis; however, the duration of follow-up was significantly associated with the rate (p = 0.057). None of the selected articles reported pulp necrosis rate in the closed apex; thus, no meta-analysis was possible.
Conclusion: DAT is a reliable treatment alternative for the replacement of lost teeth. The procedure yields low complication rates of infection-related root resorption, ankylosis, and pulp necrosis, while achieving high rates of survival and success. It can be accomplished with donor teeth that have an open or closed apex.
自体牙移植(DAT)是一种外科手术,用于替换无望或缺失的牙齿。该技术需要有目的地拔出一颗理想的健全牙齿,然后将其植入同一口腔的另一个牙槽位。目的:分析供牙根发育不全(开尖)和根形成完整(闭尖)的成活率和成功率。此外,它试图评估DAT与感染相关(炎症性)根吸收、强直和牙髓坏死并发症的预后成分。材料和方法:2014年1月至2024年11月,使用EBSCO MEDLINE Web of Science、Scopus和Cochrane数据库进行电子检索。所选文章是在材料和统计方法一节中概述的参数范围内选择的。解决了PICO问题“供牙的牙根发育阶段是否会影响自体牙移植的长期预后和临床结果?”结果:26篇文章共移植牙2837颗,其中开放尖供牙2192颗,封闭尖供牙645颗。开尖组和闭尖组的总生存率分别为93.8%和92.6%。开尖组和闭尖组的成功率分别为84.0%和86.7%。开尖组感染相关的根吸收率为6.3%,闭尖组为5.9%。针尖开放组强直率为4.4%,针尖闭合组为6.7%。开尖组牙髓坏死率为6.4%。未发现影响牙髓坏死率的因素;然而,随访时间与发病率显著相关(p = 0.057)。所选文章均未报道闭合尖髓坏死率;因此,不可能进行meta分析。结论:DAT是一种可靠的治疗方法。该手术产生感染相关的牙根吸收、强直和牙髓坏死的并发症发生率低,同时获得较高的存活率和成功率。它可以完成与供体牙有一个开放或封闭的顶端。
{"title":"Outcomes of dental autotransplantation in relation to dental root formation. Systematic review and meta-analysis.","authors":"Hugo George Rowland, Marcela Ferrer Molina, Tawfiq Hijazi Alsadi, Susana Muwaquet Rodriguez","doi":"10.1186/s12938-025-01450-0","DOIUrl":"10.1186/s12938-025-01450-0","url":null,"abstract":"<p><strong>Introduction: </strong>Dental autotransplantation (DAT) is a surgical procedure used to replace hopeless or missing teeth. The technique entails the purposeful extraction of a desired sound tooth, which is then implanted into another alveolar site of the same oral cavity.</p><p><strong>Objectives: </strong>To analyse the survival rates and success rates of DAT in relation to donor teeth with an incomplete root development (open apex) and complete root formation (closed apex). Additionally, it attempts to evaluate the prognostic components of DAT with infection-related (inflammatory) root resorption, ankylosis, and pulpal necrosis complications.</p><p><strong>Materials and methods: </strong>An electronic search was conducted using EBSCO MEDLINE Web of Science, Scopus and Cochrane databases from January 2014 until November 2024. The selected articles were chosen within the parameters outlined in the Materials and Statistical Methodology section. The addressed PICO question \"does the stage of the donor tooth's root development affect the long-standing prognosis and clinical outcomes of dental autotransplantation?\".</p><p><strong>Results: </strong>The final 26 articles featured a total of 2837 transplanted teeth: 2192 donor teeth with an open apex and 645 donor teeth with a closed apex. The overall survival rate was 93.8% in the open apex group and 92.6% in the closed apex group. Success rate was 84.0% in the open apex group and 86.7% in the closed apex group. The rate of infection-related root resorption was 6.3% in the open apex group and 5.9% in the closed apex group. The rate of ankylosis was 4.4% in the open apex group and 6.7% in the closed apex group. The rate of pulp necrosis was 6.4% in the open apex group. No factors were identified as influencing the rate of pulp necrosis; however, the duration of follow-up was significantly associated with the rate (p = 0.057). None of the selected articles reported pulp necrosis rate in the closed apex; thus, no meta-analysis was possible.</p><p><strong>Conclusion: </strong>DAT is a reliable treatment alternative for the replacement of lost teeth. The procedure yields low complication rates of infection-related root resorption, ankylosis, and pulp necrosis, while achieving high rates of survival and success. It can be accomplished with donor teeth that have an open or closed apex.</p>","PeriodicalId":8927,"journal":{"name":"BioMedical Engineering OnLine","volume":"24 1","pages":"153"},"PeriodicalIF":2.9,"publicationDate":"2025-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12755019/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145861852","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-30DOI: 10.1186/s12938-025-01481-7
Jiaqi Li, Xi Yang, Mei Zhang, Le Ma, Xu Wang, Xinyu Wang, Xin Mao, Guangsen Li
Background: Liver fibrosis after liver transplantation seriously affects graft survival. This study aimed to use shear wave elastography (SWE) to non-invasively evaluate the stiffness of the transplanted liver and spleen in liver transplant recipients.
Methods: Seventy-one patients who were regularly reviewed in our hospital after liver transplantation (> 2 years) were enrolled and were divided into two groups: Group B (30 cases without splenomegaly before liver transplantation) and Group C (41 cases with splenomegaly before liver transplantation). Besides, we selected 35 normal controls as Group A. All patients underwent conventional ultrasound, SWE, and serum liver fibrosis markers exams to obtain the oblique diameter of right lobe of liver (ODRL), portal vein diameter (PVD), portal vein velocity (PVV), peak systolic velocity (PSV), splenic vein diameter (SVD), splenic length, splenic thickness, liver stiffness measurement (LSM), spleen stiffness measurement (SSM) and laboratory test results. Research the correlation between SWE parameters and serum liver fibrosis markers by Pearson linear analysis.
Results: There was no difference in ODRL, PVD, PVV, and PSV among the three groups (all P > 0.05). Compared with Group A, hyaluronic acid (HA), laminin (LN), type III N-peptide collagen (PIIIP N-P), collagen type IV (IVC), and LSM were increased in Groups B and C (all P < 0.05) and were all higher in Group C than in Group B (all P < 0.05). Compared with Groups A and B, Group C was significantly higher in SVD, splenic length, splenic thickness, and SSM (all P < 0.05), whereas there was no difference in comparison of Group B with Group A (all P > 0.05). Pearson's correlation analysis showed that LSM and HA, LN, PIIIN-P, and IVC were positively correlated.
Conclusion: SWE is valuable to evaluate the stiffness of transplanted liver and spleen in recipients after liver transplantation, and preoperative splenomegaly is a factor influencing graft fibrosis after transplantation.
{"title":"Evaluation of the stiffness of the transplanted liver and spleen in recipients after liver transplantation on shear wave elastography.","authors":"Jiaqi Li, Xi Yang, Mei Zhang, Le Ma, Xu Wang, Xinyu Wang, Xin Mao, Guangsen Li","doi":"10.1186/s12938-025-01481-7","DOIUrl":"10.1186/s12938-025-01481-7","url":null,"abstract":"<p><strong>Background: </strong>Liver fibrosis after liver transplantation seriously affects graft survival. This study aimed to use shear wave elastography (SWE) to non-invasively evaluate the stiffness of the transplanted liver and spleen in liver transplant recipients.</p><p><strong>Methods: </strong>Seventy-one patients who were regularly reviewed in our hospital after liver transplantation (> 2 years) were enrolled and were divided into two groups: Group B (30 cases without splenomegaly before liver transplantation) and Group C (41 cases with splenomegaly before liver transplantation). Besides, we selected 35 normal controls as Group A. All patients underwent conventional ultrasound, SWE, and serum liver fibrosis markers exams to obtain the oblique diameter of right lobe of liver (ODRL), portal vein diameter (PVD), portal vein velocity (PVV), peak systolic velocity (PSV), splenic vein diameter (SVD), splenic length, splenic thickness, liver stiffness measurement (LSM), spleen stiffness measurement (SSM) and laboratory test results. Research the correlation between SWE parameters and serum liver fibrosis markers by Pearson linear analysis.</p><p><strong>Results: </strong>There was no difference in ODRL, PVD, PVV, and PSV among the three groups (all P > 0.05). Compared with Group A, hyaluronic acid (HA), laminin (LN), type III N-peptide collagen (PIIIP N-P), collagen type IV (IVC), and LSM were increased in Groups B and C (all P < 0.05) and were all higher in Group C than in Group B (all P < 0.05). Compared with Groups A and B, Group C was significantly higher in SVD, splenic length, splenic thickness, and SSM (all P < 0.05), whereas there was no difference in comparison of Group B with Group A (all P > 0.05). Pearson's correlation analysis showed that LSM and HA, LN, PIIIN-P, and IVC were positively correlated.</p><p><strong>Conclusion: </strong>SWE is valuable to evaluate the stiffness of transplanted liver and spleen in recipients after liver transplantation, and preoperative splenomegaly is a factor influencing graft fibrosis after transplantation.</p>","PeriodicalId":8927,"journal":{"name":"BioMedical Engineering OnLine","volume":"24 1","pages":"154"},"PeriodicalIF":2.9,"publicationDate":"2025-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12755005/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145861845","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-29DOI: 10.1186/s12938-025-01482-6
Mohammed Rizwan Shaikh, Andrew Jeyabose, R Vijaya Arjunan
Alzheimer's disease (AD) poses urgent significant challenges for early detection and personalized prognostication. Deep learning (DL) is now regarded as a pivotal technology for extracting subtle imaging and non-imaging biomarkers; yet translating these advances into clinical practice demands a coherent framework. In this review, we first survey input modalities from structural and functional MRI to PET, genetic profiles, and cognitive tests and the key public cohorts that supply multimodal data. We then categorize DL architectures into three complementary pillars: (1) end-to-end classification networks for direct diagnosis; (2) multimodal fusion strategies that integrate heterogeneous biomarkers; and (3) automated segmentation pipelines for precise anatomical delineation. We also examine subtyping algorithms that uncover latent AD phenotypes via clustering and decision-tree models. In order to fill the gap between high-performance DL and real-world adoption, we detail explainable AI methods that render model decisions transparent, and we review performance benchmarks including accuracy, sensitivity/specificity, Dice and Jaccard indices to contextualize efficacy. Finally, we discuss clinical translation, covering prospective validation, workflow integration, and regulatory/privacy considerations, before outlining challenges and future directions such as data heterogeneity, interpretability-accuracy trade-offs, early/preclinical detection, and federated learning. Our roadmap highlights the interdisciplinary collaborations and technical innovations needed to deliver robust, trustworthy, and scalable DL-based tools for Alzheimer's care.
{"title":"Deep learning for Alzheimer's disease: advances in classification, segmentation, subtyping, and explainability.","authors":"Mohammed Rizwan Shaikh, Andrew Jeyabose, R Vijaya Arjunan","doi":"10.1186/s12938-025-01482-6","DOIUrl":"10.1186/s12938-025-01482-6","url":null,"abstract":"<p><p>Alzheimer's disease (AD) poses urgent significant challenges for early detection and personalized prognostication. Deep learning (DL) is now regarded as a pivotal technology for extracting subtle imaging and non-imaging biomarkers; yet translating these advances into clinical practice demands a coherent framework. In this review, we first survey input modalities from structural and functional MRI to PET, genetic profiles, and cognitive tests and the key public cohorts that supply multimodal data. We then categorize DL architectures into three complementary pillars: (1) end-to-end classification networks for direct diagnosis; (2) multimodal fusion strategies that integrate heterogeneous biomarkers; and (3) automated segmentation pipelines for precise anatomical delineation. We also examine subtyping algorithms that uncover latent AD phenotypes via clustering and decision-tree models. In order to fill the gap between high-performance DL and real-world adoption, we detail explainable AI methods that render model decisions transparent, and we review performance benchmarks including accuracy, sensitivity/specificity, Dice and Jaccard indices to contextualize efficacy. Finally, we discuss clinical translation, covering prospective validation, workflow integration, and regulatory/privacy considerations, before outlining challenges and future directions such as data heterogeneity, interpretability-accuracy trade-offs, early/preclinical detection, and federated learning. Our roadmap highlights the interdisciplinary collaborations and technical innovations needed to deliver robust, trustworthy, and scalable DL-based tools for Alzheimer's care.</p>","PeriodicalId":8927,"journal":{"name":"BioMedical Engineering OnLine","volume":"24 1","pages":"150"},"PeriodicalIF":2.9,"publicationDate":"2025-12-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12752331/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145853699","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Background: The effects of conditioned medium (CM) and extracellular vesicles (EVs) derived from human Wharton's jelly mesenchymal stem cells (hWJMSCs) on in vitro maturation (IVM) of immature oocytes in both normal and polycystic ovary syndrome (PCOS)-induced mice were investigated. PCOS was induced in adult female NMRI mice by administering letrozole (90 μg/kg/day) via gavage for one week. Germinal vesicle (GV) oocytes were collected from both PCOS-induced and normal mice, while mature oocytes (MII) were obtained from superovulated normal mice to serve as controls. The experimental groups included 7 groups: Control (MII oocytes), 3 IVM groups (in vitro maturation of GV oocytes): IVM (with simple IVM media), IVM + CM, and IVM + EVs (IVM media supplemented with CM and EVs, respectively), and three PCOS groups (in vitro maturation of GV oocytes from PCOS-induced mice): PCOS IVM (with simple IVM media), PCOS IVM + CM, and PCOS IVM + EVs (IVM media supplemented with CM and EVs, respectively). After IVM was conducted in all groups, mature oocytes were harvested and assessed for maturation rate, morphology, viability, and gene expression profiles of key regulators (CDK1, CCNB1, MAP2K). Developmentally competent oocytes were selected using Brilliant Cresyl Blue staining and then subjected to in vitro maturation with or without CM or EVs supplementation. Nuclear maturation was evaluated via orcein staining, while viability was assessed using Trypan Blue. Morphometric parameters were measured using ImageJ software. Real-time PCR was utilized for the evaluation of gene expression of targeted genes.
Results: Results demonstrated that in BCB + oocytes, CM and EVs improved the mature oocytes compared to IVM. Oocytes from PCOS-induced mice exhibited reduced maturation and increased degeneration, which were rescued by CM and EV treatment. Gene expression analysis revealed downregulation of MAP2K, CCNB1, and CDK1 in IVM and PCOS IVM groups compared to the control group, while CM supplementation restored their expression. Oocyte diameter and viability were significantly enhanced in IVM + CM compared to IVM (P < 0.05).
Conclusions: These findings suggest that hWJMSC-derived secretomes, particularly CM, enhance oocyte maturation and quality, offering potential therapeutic benefits for IVM in both normal and PCOS conditions.
{"title":"Conditioned media and extracellular vesicles derived from human Wharton's jelly mesenchymal stem cells improve the in vitro maturation of immature oocytes in normal and PCOS mouse model.","authors":"Arezoo Solati, Sanaz Alaee, Fatemeh Zal, Zahra Khodabandeh, Mahintaj Dara, Shayesteh Mehdinejadiani, Sedigheh Bahmyari","doi":"10.1186/s12938-025-01500-7","DOIUrl":"10.1186/s12938-025-01500-7","url":null,"abstract":"<p><strong>Background: </strong>The effects of conditioned medium (CM) and extracellular vesicles (EVs) derived from human Wharton's jelly mesenchymal stem cells (hWJMSCs) on in vitro maturation (IVM) of immature oocytes in both normal and polycystic ovary syndrome (PCOS)-induced mice were investigated. PCOS was induced in adult female NMRI mice by administering letrozole (90 μg/kg/day) via gavage for one week. Germinal vesicle (GV) oocytes were collected from both PCOS-induced and normal mice, while mature oocytes (MII) were obtained from superovulated normal mice to serve as controls. The experimental groups included 7 groups: Control (MII oocytes), 3 IVM groups (in vitro maturation of GV oocytes): IVM (with simple IVM media), IVM + CM, and IVM + EVs (IVM media supplemented with CM and EVs, respectively), and three PCOS groups (in vitro maturation of GV oocytes from PCOS-induced mice): PCOS IVM (with simple IVM media), PCOS IVM + CM, and PCOS IVM + EVs (IVM media supplemented with CM and EVs, respectively). After IVM was conducted in all groups, mature oocytes were harvested and assessed for maturation rate, morphology, viability, and gene expression profiles of key regulators (CDK1, CCNB1, MAP2K). Developmentally competent oocytes were selected using Brilliant Cresyl Blue staining and then subjected to in vitro maturation with or without CM or EVs supplementation. Nuclear maturation was evaluated via orcein staining, while viability was assessed using Trypan Blue. Morphometric parameters were measured using ImageJ software. Real-time PCR was utilized for the evaluation of gene expression of targeted genes.</p><p><strong>Results: </strong>Results demonstrated that in BCB + oocytes, CM and EVs improved the mature oocytes compared to IVM. Oocytes from PCOS-induced mice exhibited reduced maturation and increased degeneration, which were rescued by CM and EV treatment. Gene expression analysis revealed downregulation of MAP2K, CCNB1, and CDK1 in IVM and PCOS IVM groups compared to the control group, while CM supplementation restored their expression. Oocyte diameter and viability were significantly enhanced in IVM + CM compared to IVM (P < 0.05).</p><p><strong>Conclusions: </strong>These findings suggest that hWJMSC-derived secretomes, particularly CM, enhance oocyte maturation and quality, offering potential therapeutic benefits for IVM in both normal and PCOS conditions.</p>","PeriodicalId":8927,"journal":{"name":"BioMedical Engineering OnLine","volume":" ","pages":"16"},"PeriodicalIF":2.9,"publicationDate":"2025-12-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12853761/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145846374","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-24DOI: 10.1186/s12938-025-01483-5
Yingtao Zhang, Jieming Li, Lin Li, Yan Chen, Jinlong Li, Wei Xing
Epileptic spasm (ES), characterized by sudden muscle contractions and loss of consciousness, poses significant challenges in early diagnosis and treatment, especially in infants and young children. Despite advances in EEG-based seizure detection, the automatic classification of ES remains a complex task due to the variability of seizure patterns. In this study, we propose an approach for classifying ES EEG based on clinically collected data, using time-frequency domain features derived from EEG signals and machine learning models. A total of 54 time-frequency features were extracted, and three machine learning algorithms-Random Forest (RF), K-Nearest Neighbors (KNN), and Support Vector Machine (SVM)-were employed to classify the seizures. The results show that the RF model achieved the highest classification accuracy of 81.18% when fewer features were used, whereas KNN has increased performances with larger feature sets. This work highlights the potential of combining time-frequency features with machine learning for accurate seizure classification, offering a promising tool for automated monitoring and diagnosis of ES. Further research is needed to refine feature extraction methods and improve model robustness for clinical applications.
{"title":"Epileptic spasm recognition: EEG classification using time-frequency features and machine learning.","authors":"Yingtao Zhang, Jieming Li, Lin Li, Yan Chen, Jinlong Li, Wei Xing","doi":"10.1186/s12938-025-01483-5","DOIUrl":"10.1186/s12938-025-01483-5","url":null,"abstract":"<p><p>Epileptic spasm (ES), characterized by sudden muscle contractions and loss of consciousness, poses significant challenges in early diagnosis and treatment, especially in infants and young children. Despite advances in EEG-based seizure detection, the automatic classification of ES remains a complex task due to the variability of seizure patterns. In this study, we propose an approach for classifying ES EEG based on clinically collected data, using time-frequency domain features derived from EEG signals and machine learning models. A total of 54 time-frequency features were extracted, and three machine learning algorithms-Random Forest (RF), K-Nearest Neighbors (KNN), and Support Vector Machine (SVM)-were employed to classify the seizures. The results show that the RF model achieved the highest classification accuracy of 81.18% when fewer features were used, whereas KNN has increased performances with larger feature sets. This work highlights the potential of combining time-frequency features with machine learning for accurate seizure classification, offering a promising tool for automated monitoring and diagnosis of ES. Further research is needed to refine feature extraction methods and improve model robustness for clinical applications.</p>","PeriodicalId":8927,"journal":{"name":"BioMedical Engineering OnLine","volume":"24 1","pages":"149"},"PeriodicalIF":2.9,"publicationDate":"2025-12-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12729157/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145826805","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Background: Diquat (DQ) exposure can cause acute kidney failure and rhabdomyolysis. Accordingly, the current study aimed to assess how DQ toxicity affects the viability of human proximal tubular cells (HK-2) and to evaluate the potential protective effects of Tannic acid (TA) in this experimental model.
Methods: HK-2 cells were divided into groups: negative control, positive control, DQ alone, and DQ combined with TA at concentrations of 0.5, 2.5, and 5 μmol/L for 24 h. Subsequently, cell viability, reactive oxygen species (ROS) production, oxidative stress and inflammatory marker concentrations, as well as the expression of apoptosis-related genes, were evaluated in all groups.
Results: The data indicate that DQ significantly increased ROS production and elevated the levels of malondialdehyde (MDA) and interleukin-6 (IL-6), which were associated with increased expression of BCL2 associated X protein (BAX) and cleaved caspase-3 genes in HK-2 cells. Additionally, DQ exposure led to significant decreases in total antioxidant capacity (TAC), interleukin-10 (IL-10) levels, and B-cell lymphoma 2 (Bcl-2) anti-apoptotic gene expression. TA treatment inhibited oxidative stress, inflammation, and apoptosis, likely through the BAX/Bcl-2 and caspase-3/cleaved caspase-3 signaling pathways in renal cells.
Conclusion: According to the results, TA treatment at all tested concentrations enhanced the expression of anti-apoptotic genes and suppressed cell apoptosis, thereby increasing renal cell viability.
{"title":"Tannic acid inhibits diquat induced human renal HK-2 cells apoptosis through BAX/Bcl2/caspase/cleaved caspase-3 signaling pathway.","authors":"Maryam Radan, Narges Atefipour, Parnian Abedizadeh, Dian Dayer, Khojasteh Hoseinynejad","doi":"10.1186/s12938-025-01484-4","DOIUrl":"10.1186/s12938-025-01484-4","url":null,"abstract":"<p><strong>Background: </strong>Diquat (DQ) exposure can cause acute kidney failure and rhabdomyolysis. Accordingly, the current study aimed to assess how DQ toxicity affects the viability of human proximal tubular cells (HK-2) and to evaluate the potential protective effects of Tannic acid (TA) in this experimental model.</p><p><strong>Methods: </strong>HK-2 cells were divided into groups: negative control, positive control, DQ alone, and DQ combined with TA at concentrations of 0.5, 2.5, and 5 μmol/L for 24 h. Subsequently, cell viability, reactive oxygen species (ROS) production, oxidative stress and inflammatory marker concentrations, as well as the expression of apoptosis-related genes, were evaluated in all groups.</p><p><strong>Results: </strong>The data indicate that DQ significantly increased ROS production and elevated the levels of malondialdehyde (MDA) and interleukin-6 (IL-6), which were associated with increased expression of BCL2 associated X protein (BAX) and cleaved caspase-3 genes in HK-2 cells. Additionally, DQ exposure led to significant decreases in total antioxidant capacity (TAC), interleukin-10 (IL-10) levels, and B-cell lymphoma 2 (Bcl-2) anti-apoptotic gene expression. TA treatment inhibited oxidative stress, inflammation, and apoptosis, likely through the BAX/Bcl-2 and caspase-3/cleaved caspase-3 signaling pathways in renal cells.</p><p><strong>Conclusion: </strong>According to the results, TA treatment at all tested concentrations enhanced the expression of anti-apoptotic genes and suppressed cell apoptosis, thereby increasing renal cell viability.</p>","PeriodicalId":8927,"journal":{"name":"BioMedical Engineering OnLine","volume":"24 1","pages":"148"},"PeriodicalIF":2.9,"publicationDate":"2025-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12729203/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145817581","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-23DOI: 10.1186/s12938-025-01501-6
Marc Ilic, Jonas Häner, Julian Lehmann, Anselm W Stark, Joël Illi, Christoph Gräni, Marc Bentele, Philine Baumann-Zumstein, Julia Busch, Andreas Haeberlin
Objective: To create high-resolution, patient-specific 3D coronary artery models aimed at developing digital models and functional phantoms for the testing of cardiac catheterization devices.
Methods: Using coronary computed tomography angiography (CCTA) and optical coherence tomography (OCT), coronary artery lesions were identified and quantified. Imaging data were fused using a custom-made workflow to create highly accurate digital 3D models. For validation of the workflow, coronary artery phantoms were fabricated using additive manufacturing. An OCT was then conducted on the 3D printed phantom, and the developed workflow was applied to generate a derivative model, which was subsequently compared to the original.
Results: CCTA and OCT datasets from 15 patients were successfully collected and used to develop patient-specific 3D coronary artery models, including detailed inner shells, calcifications, outer wall structures, and side branches. Of these, 13 out of 15 3D printed phantoms were successfully validated and compared to their corresponding original model. The median vertex deviation of the derivative model was 0.15 (0.14 0.17) mm. The median absolute stenosis difference between the derivative model and the original model was 3 (1-5)%AS.
Conclusion: We present a novel workflow to produce high-resolution patient-specific phantoms of coronary arteries.
{"title":"A comprehensive workflow for CCTA and OCT data fusion with 3D printing validation: advancing patient-specific testing environments for percutaneous coronary intervention devices.","authors":"Marc Ilic, Jonas Häner, Julian Lehmann, Anselm W Stark, Joël Illi, Christoph Gräni, Marc Bentele, Philine Baumann-Zumstein, Julia Busch, Andreas Haeberlin","doi":"10.1186/s12938-025-01501-6","DOIUrl":"10.1186/s12938-025-01501-6","url":null,"abstract":"<p><strong>Objective: </strong>To create high-resolution, patient-specific 3D coronary artery models aimed at developing digital models and functional phantoms for the testing of cardiac catheterization devices.</p><p><strong>Methods: </strong>Using coronary computed tomography angiography (CCTA) and optical coherence tomography (OCT), coronary artery lesions were identified and quantified. Imaging data were fused using a custom-made workflow to create highly accurate digital 3D models. For validation of the workflow, coronary artery phantoms were fabricated using additive manufacturing. An OCT was then conducted on the 3D printed phantom, and the developed workflow was applied to generate a derivative model, which was subsequently compared to the original.</p><p><strong>Results: </strong>CCTA and OCT datasets from 15 patients were successfully collected and used to develop patient-specific 3D coronary artery models, including detailed inner shells, calcifications, outer wall structures, and side branches. Of these, 13 out of 15 3D printed phantoms were successfully validated and compared to their corresponding original model. The median vertex deviation of the derivative model was 0.15 (0.14 <math><mo>-</mo></math> 0.17) mm. The median absolute stenosis difference between the derivative model and the original model was 3 (1-5)%AS.</p><p><strong>Conclusion: </strong>We present a novel workflow to produce high-resolution patient-specific phantoms of coronary arteries.</p>","PeriodicalId":8927,"journal":{"name":"BioMedical Engineering OnLine","volume":" ","pages":"15"},"PeriodicalIF":2.9,"publicationDate":"2025-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145809304","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
With rapid advances in regenerative medicine and tissue engineering, poly(lactic-co-glycolic acid) (PLGA) scaffolds have garnered extensive attention owing to their excellent biocompatibility and biodegradability. Current studies primarily focus on material selection and scaffold preparation, printing techniques, and their efficacy in animal experiments and clinical applications. While several studies have demonstrated the potential of PLGA scaffolds in promoting bone regeneration, challenges remain, including insufficient mechanical properties, a mismatch between degradation rates and bone repair rates, limited long-term clinical data, and the need for improved hydrophilicity and cytocompatibility. Additionally, issues such as limited printing precision and resolution persist. Therefore, innovating material synthesis and processing technologies, as well as developing high-precision, fast-printing techniques, holds significant implications. This paper aims to analyze and summarize the application of 3D printing technology, the properties of PLGA, research on PLGA composites incorporating drugs, inorganic materials, and organic materials, as well as the design and fabrication of 3D-printed PLGA scaffolds. The aim is to review recent research progress in the use of 3D-printed PLGA scaffolds for bone defect repair, assess their potential for bone regeneration, and explore future development directions.
{"title":"Research progress of 3D-printed PLGA scaffolds for the treatment of bone defects.","authors":"Huiqin Yang, Chengbin Lu, Benmo Xu, Yuanlong Shi, Xin Xin, Zhongxin Wang, Zhuoyuan Chen, Fang Yang","doi":"10.1186/s12938-025-01505-2","DOIUrl":"10.1186/s12938-025-01505-2","url":null,"abstract":"<p><p>With rapid advances in regenerative medicine and tissue engineering, poly(lactic-co-glycolic acid) (PLGA) scaffolds have garnered extensive attention owing to their excellent biocompatibility and biodegradability. Current studies primarily focus on material selection and scaffold preparation, printing techniques, and their efficacy in animal experiments and clinical applications. While several studies have demonstrated the potential of PLGA scaffolds in promoting bone regeneration, challenges remain, including insufficient mechanical properties, a mismatch between degradation rates and bone repair rates, limited long-term clinical data, and the need for improved hydrophilicity and cytocompatibility. Additionally, issues such as limited printing precision and resolution persist. Therefore, innovating material synthesis and processing technologies, as well as developing high-precision, fast-printing techniques, holds significant implications. This paper aims to analyze and summarize the application of 3D printing technology, the properties of PLGA, research on PLGA composites incorporating drugs, inorganic materials, and organic materials, as well as the design and fabrication of 3D-printed PLGA scaffolds. The aim is to review recent research progress in the use of 3D-printed PLGA scaffolds for bone defect repair, assess their potential for bone regeneration, and explore future development directions.</p>","PeriodicalId":8927,"journal":{"name":"BioMedical Engineering OnLine","volume":" ","pages":"14"},"PeriodicalIF":2.9,"publicationDate":"2025-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145800181","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}