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Learning optimal early decision treatment rules with multi-domain intermediate outcomes. 学习具有多域中间结果的最优早期决策处理规则。
IF 1.7 4区 数学 Q3 BIOLOGY Pub Date : 2026-01-06 DOI: 10.1093/biomtc/ujaf167
Wenbo Fei, Yuan Chen, Zexi Cai, Donglin Zeng, Yuanjia Wang

Implementing precision medicine for mental disorders presents challenges due to disease complexity and heterogeneity in patient responses. Empirical studies suggest that early indicators, such as interim measures (e.g., interim patient self-reports) of disease improvement or relapse, can predict longer-term outcomes, serving as proxies when final outcomes (e.g., in-clinic assessments) are less accessible. However, existing approaches for deriving individualized treatment rules (ITRs) often ignore these early signals, instead focusing only on a final outcome as the reward. In this work, we propose a new method incorporating intermediate outcomes from various domains into a personalized composite outcome, serving as the reward for learning ITRs. This composite is a weighted sum of inferred latent states from observed measures, with weights personalized for each patient, ensuring consistency with the long-term final response. Our simulations show that this approach not only provides early detection of non-responders but also improves long-term treatment outcomes. Applying our framework to a randomized clinical trial on major depressive disorder (MDD) demonstrates its effectiveness and advantages in ITR learning.

由于疾病的复杂性和患者反应的异质性,对精神障碍实施精准医学提出了挑战。实证研究表明,疾病改善或复发的中期措施(如患者中期自我报告)等早期指标可以预测长期结果,在最终结果(如临床评估)难以获得时可作为替代指标。然而,现有的获得个性化治疗规则(itr)的方法往往忽略了这些早期信号,而只关注最终结果作为奖励。在这项工作中,我们提出了一种新的方法,将来自不同领域的中间结果合并到个性化的复合结果中,作为学习itr的奖励。该组合是根据观察到的措施推断的潜在状态的加权和,每个患者的权重个性化,确保与长期最终反应的一致性。我们的模拟表明,这种方法不仅可以早期发现无反应者,还可以改善长期治疗结果。将我们的框架应用于重度抑郁症(MDD)的随机临床试验,证明了其在ITR学习中的有效性和优势。
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引用次数: 0
Jointly modeling multiple endpoints for efficient treatment effect estimation in randomized controlled trials. 随机对照试验中多终点联合建模,有效估计治疗效果。
IF 1.7 4区 数学 Q3 BIOLOGY Pub Date : 2026-01-06 DOI: 10.1093/biomtc/ujaf166
Jack M Wolf, Joseph S Koopmeiners, David M Vock

Randomized controlled trials are the gold standard for evaluating the efficacy of an intervention. However, there is often a trade-off between selecting the most scientifically relevant primary endpoint versus a less relevant, but more powerful, endpoint. For example, in the context of tobacco regulatory science many trials evaluate cigarettes per day as the primary endpoint instead of abstinence from smoking due to limited power. Additionally, it is often of interest to consider subgroup analyses to answer additional questions; such analyses are rarely adequately powered. In practice, trials often collect multiple endpoints. Intuitively, if multiple endpoints demonstrate a similar treatment effect, we would be more confident in the results of this trial. However, there is limited research on leveraging information from secondary endpoints besides using composite endpoints, which can be difficult to interpret. In this paper, we develop an estimator for the treatment effect on the primary endpoint based on a joint model for primary and secondary efficacy endpoints. This estimator gains efficiency over the standard treatment effect estimator when the model is correctly specified but is robust to model misspecification via model averaging. We illustrate our approach by estimating the effect of very low nicotine content cigarettes on the proportion of Black people who smoke who achieve abstinence and find our approach reduces the standard error by 27%.

随机对照试验是评估干预效果的黄金标准。然而,在选择最科学相关的主要终点与选择不太相关但更有效的终点之间,往往存在权衡。例如,在烟草管理科学的背景下,许多试验评估每天吸烟作为主要终点,而不是由于有限的权力而戒烟。此外,考虑子群体分析来回答额外的问题通常是有意义的;这样的分析很少有足够的动力。在实践中,试验通常收集多个端点。直观地说,如果多个终点显示出相似的治疗效果,我们将对该试验的结果更有信心。然而,除了使用复合端点之外,关于利用来自次要端点的信息的研究有限,这可能很难解释。在本文中,我们基于主要和次要疗效终点的联合模型开发了治疗效果对主要终点的估计。当模型正确指定时,该估计器比标准处理效果估计器效率更高,但通过模型平均对模型错误指定具有鲁棒性。我们通过估计尼古丁含量极低的香烟对戒烟的黑人比例的影响来说明我们的方法,并发现我们的方法将标准误差降低了27%。
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引用次数: 0
Correction to: Continuous-time mediation analysis for repeatedly measured mediators and outcomes. 修正:对重复测量的中介因子和结果进行连续时间中介分析。
IF 1.7 4区 数学 Q3 BIOLOGY Pub Date : 2026-01-06 DOI: 10.1093/biomtc/ujag029
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引用次数: 0
Multiple-index interaction models to accommodate exposure grouping in environmental mixtures. 适应环境混合物中暴露分组的多指数相互作用模型。
IF 1.7 4区 数学 Q3 BIOLOGY Pub Date : 2026-01-06 DOI: 10.1093/biomtc/ujaf175
Myeonggyun Lee, Mengling Liu, Shanshan Zhao

An important goal of environmental health research is to assess risks posed by mixtures of environmental exposures. Studies in different fields often group exposures based on their shared biological features. However, such grouping information has not been widely utilized in population-based environmental mixtures analyses due to the lack of appropriate statistical tools. Inspired by data from the National Health and Nutrition Examination Survey (NHANES), we propose a semiparametric multiple-index interaction model (MIIM) to explore the impact of three groups of persistent organic pollutants (POPs) on leukocyte telomere length (LTL). MIIM effectively addresses the challenge of high dimensionality by summarizing exposures into group-level indices, while allowing for nonlinear effects and interactions among exposures through these group indices. This formulation provides interpretable insights into both overall group effects and between-group interactions on the outcome, and allows for identification of key contributors within each group. MIIM can be applied to different types of health outcomes, including continuous, binary, and survival outcomes. We conducted Monte Carlo simulation studies to evaluate the performance of MIIM under various scenarios with high-dimensional and correlated exposure mixtures and illustrated its application to the NHANES data. By bridging biological insights with population-based epidemiological data, MIIM serves as a translational tool to explore the effects of environmental mixtures on health outcomes.

环境卫生研究的一个重要目标是评估各种环境暴露所造成的风险。不同领域的研究通常根据其共同的生物学特征对暴露进行分组。然而,由于缺乏适当的统计工具,这种分组信息尚未广泛用于基于人口的环境混合分析。受美国国家健康与营养调查(NHANES)数据的启发,我们提出了一个半参数多指数相互作用模型(MIIM)来探讨三组持久性有机污染物(POPs)对白细胞端粒长度(LTL)的影响。MIIM通过将暴露汇总为组级指数,同时通过这些组指数允许暴露之间的非线性效应和相互作用,有效地解决了高维性的挑战。这个公式为整体群体效应和群体之间的相互作用提供了可解释的见解,并允许识别每个群体中的关键贡献者。MIIM可应用于不同类型的健康结果,包括连续、二元和生存结果。我们进行了蒙特卡罗模拟研究,以评估MIIM在各种高维和相关暴露混合物情况下的性能,并说明其在NHANES数据中的应用。通过将生物学见解与基于人群的流行病学数据联系起来,MIIM可作为一种转化工具,探索环境混合物对健康结果的影响。
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引用次数: 0
Scalable and distributed individualized treatment rules for multicenter datasets. 多中心数据集的可扩展和分布式个性化处理规则。
IF 1.7 4区 数学 Q3 BIOLOGY Pub Date : 2026-01-06 DOI: 10.1093/biomtc/ujag003
Nan Qiao, Wangcheng Li, Jingxiao Zhang, Canyi Chen

Synthesizing information from multiple data sources is crucial for constructing accurate individualized treatment rules (ITRs). However, privacy concerns often present significant barriers to the integrative analysis of such multicenter data. Classical meta-learning, which averages local estimates to derive the final ITR, is frequently suboptimal due to biases in these local estimates. To address these challenges, we propose a convolution-smoothed weighted support vector machine for learning the optimal ITR. The accompanying loss function is both convex and smooth, which allows us to develop an efficient multiround distributed learning procedure. Such distributed learning ensures optimal statistical performance with a fixed number of communication rounds, thereby minimizing coordination costs across data centers while preserving data privacy. Our method avoids pooling subject-level raw data and instead requires only sharing summary statistics. Additionally, we develop an efficient coordinate gradient descent algorithm, which guarantees at least linear convergence for the resulting optimization problem. Extensive simulations and an application to sepsis treatment across multiple intensive care units validate the effectiveness of the proposed method.

综合来自多个数据源的信息对于构建准确的个性化治疗规则(itr)至关重要。然而,隐私问题往往是对这种多中心数据进行综合分析的重大障碍。经典的元学习,通过平均局部估计来得出最终的ITR,由于这些局部估计中的偏差,经常是次优的。为了解决这些挑战,我们提出了一种卷积平滑加权支持向量机来学习最优ITR。伴随的损失函数是凸的和光滑的,这使得我们可以开发一个高效的多轮分布式学习过程。这种分布式学习通过固定的通信轮数确保了最佳的统计性能,从而最大限度地减少了跨数据中心的协调成本,同时保护了数据隐私。我们的方法避免汇集主题级别的原始数据,而只需要共享汇总统计数据。此外,我们开发了一种高效的坐标梯度下降算法,它保证了最终优化问题至少是线性收敛的。广泛的模拟和应用到脓毒症治疗跨多个重症监护病房验证了所提出的方法的有效性。
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引用次数: 0
Computational aspects of psychometric methods with R by Patricia Martinková and Adéla Hladká, Chapman & Hall/CRC, 2023, ISBN: 9781003054313, https://doi.org/10.1201/9781003054313. 心理测量方法的计算方面与R,帕特丽夏·马丁科夫<e:1>和ad<s:1> la hladk<e:1>,查普曼和霍尔/CRC, 2023, ISBN: 9781003054313, https://doi.org/10.1201/9781003054313。
IF 1.7 4区 数学 Q3 BIOLOGY Pub Date : 2025-10-10 DOI: 10.1093/biomtc/ujaf132
Jinyuan Liu
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引用次数: 0
Maximized sequential probability ratio test regression. 最大化序列概率比检验回归。
IF 1.7 4区 数学 Q3 BIOLOGY Pub Date : 2025-10-08 DOI: 10.1093/biomtc/ujaf170
Ivair R Silva, Joselito Montalban, Fernando L P de Oliveira

Ideally, the sequential monitoring of adverse events following post-licensed drugs and vaccines is correctly adjusted for confounding variables, such as gender and age, that may have an effect on the quality of the events. This is the idea behind the usual fully randomized, the placebo-control, and the self-control designs. Two prominent methods for conducting sequential analysis of the safety of post-market drugs and vaccines are the maximized sequential probability ratio test (MaxSPRT), and its conditional version, the CMaxSPRT. However, even when the assumption of sample homogeneity is realistic prior to the drug/vaccine administration, the effects caused by the drugs and vaccines on the risk of an adverse event, if any, can still vary according to observable covariates. For binomial and Poisson data, a straightforward sequential test method is introduced in order to accommodate a regression structure in the MaxSPRT. The proposed sequential regression test is also applicable for the CMaxSPRT, that is, the regression works for comparing historical and surveillance Poisson data with unknown heterogeneous baseline rates, taking into account seasonality and any other observable confounding covariates. To illustrate the usefulness of such a regression method, we describe the potential applications of the method to monitor vaccine-adverse events in Manitoba, Canada. The numeric results and examples were executed with the R Sequential package.

理想情况下,对获得许可的药物和疫苗后不良事件的序贯监测应根据可能影响事件质量的混杂变量(如性别和年龄)进行正确调整。这就是通常的完全随机、安慰剂对照和自我控制设计背后的思想。对上市后药品和疫苗安全性进行序贯分析的两种主要方法是最大序贯概率比检验(MaxSPRT)及其有条件版本CMaxSPRT。然而,即使在使用药物/疫苗之前假设样本均匀性是现实的,药物和疫苗对不良事件风险的影响(如果有的话)仍然可以根据可观察到的协变量而变化。对于二项和泊松数据,为了适应MaxSPRT中的回归结构,引入了一种直接的顺序测试方法。所提出的顺序回归检验也适用于CMaxSPRT,也就是说,考虑到季节性和任何其他可观察到的混杂协变量,回归适用于比较具有未知异构基线率的历史和监测泊松数据。为了说明这种回归方法的有用性,我们描述了该方法在加拿大马尼托巴省监测疫苗不良事件的潜在应用。数值计算结果和算例用R序贯程序包执行。
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引用次数: 0
Censoring-robust estimation in fixed sample time-to-event clinical trials with adaptive randomization. 具有自适应随机化的固定样本时间-事件临床试验的审查稳健估计。
IF 1.7 4区 数学 Q3 BIOLOGY Pub Date : 2025-10-08 DOI: 10.1093/biomtc/ujaf161
Navneet R Hakhu, Daniel L Gillen

Adaptive randomization is a clinical trial design feature used to modify treatment allocation probabilities during accrual. In time-to-event trials, the impact of adaptive randomization is less well understood for estimating treatment efficacy in the presence of time-varying effects [e.g., relative risk of progression to acquired immunodeficiency syndrome (AIDS) or death changes over time]. Here, we focus on time-to-event trials where the scientific estimand is a marginal hazard ratio in the absence of intermittent censoring over the support of observed times. We analytically show that adaptive randomization alters censoring patterns and illustrate via Monte Carlo simulations that the Cox proportional hazards estimator can yield biased estimates. As a remedy, we propose a censoring-robust estimator based on reweighting the partial likelihood score by treatment-specific censoring distributions that account for adaptive randomization. We derive the asymptotic properties of the proposed estimator and evaluate its finite sample operating characteristics via simulation. Finally, we apply our proposed method using data from the Community Programs for Clinical Research on AIDS Trial 002.

自适应随机化是一种临床试验设计特征,用于在累积过程中修改治疗分配概率。在时间事件试验中,在存在时变效应(例如,进展为获得性免疫缺陷综合征(艾滋病)或死亡的相对风险随时间变化)的情况下,适应性随机化对估计治疗效果的影响了解较少。在这里,我们将重点放在时间事件试验上,其中科学估计是在观察时间支持下缺乏间歇性审查的边际风险比。我们分析表明,自适应随机化改变了审查模式,并通过蒙特卡罗模拟说明,Cox比例风险估计器可以产生有偏估计。作为补救措施,我们提出了一种基于重新加权部分似然评分的审查鲁棒估计器,该估计器是通过考虑自适应随机化的治疗特异性审查分布来实现的。我们推导了所提估计量的渐近性质,并通过仿真评估了它的有限样本工作特性。最后,我们使用来自艾滋病临床研究社区项目002试验的数据应用我们提出的方法。
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引用次数: 0
Letter to the Editors: Comments on "Statistical inference on change points in generalized semiparametric segmented models" by Yang et al. (2025). 致编辑的信:对Yang等人(2025)的“广义半参数分段模型中变化点的统计推断”的评论。
IF 1.7 4区 数学 Q3 BIOLOGY Pub Date : 2025-10-08 DOI: 10.1093/biomtc/ujaf147
Vito M R Muggeo

We provide some comments about the recent paper by Yang et al. related to model estimation and hypothesis testing in segmented regression.

我们对Yang等人最近发表的关于分段回归中模型估计和假设检验的论文提供了一些评论。
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引用次数: 0
Bayesian monotone single-index quantile regression model with bounded response and misaligned functional covariates. 具有有界响应和失调协变量的贝叶斯单调单指标分位数回归模型。
IF 1.7 4区 数学 Q3 BIOLOGY Pub Date : 2025-10-08 DOI: 10.1093/biomtc/ujaf145
Shengxian Ding, Debajyoti Sinha, Greg Hajcak, Roman Kotov, Chao Huang

Existing research in mental health has established that rising depressive symptoms in adolescents are associated with parental history of depression and other behavioral risk factors. Our goal is to investigate how these scalar variables, together with multiple functional covariates capturing neural responses to rewards, relate to future adolescent depression. Departing from prior studies that typically relied on simple linear regression to model all covariates, we propose a novel Bayesian quantile regression framework. This approach constructs a single-index summary of both scalar and functional covariates, coupled with a monotone link function that flexibly captures unknown nonlinear relationships and interactions. Our method addresses several limitations of existing approaches. It offers a clinically interpretable index akin to that of linear models, ensures that the estimated quantile remains within the response bounds, and jointly incorporates the registration of functional covariates within the quantile regression analysis. Our simulation studies demonstrate that our method outperforms existing unrestricted single-index-based methods, particularly when there are both scalar and preregistered functional covariates. Furthermore, we showcase the practical utility of our framework using data from a large-scale adolescent depression study, yielding a new, statistically principled summary of neural reward processing with direct relevance to future depression risk.

现有的心理健康研究已经确定,青少年抑郁症状的上升与父母的抑郁史和其他行为风险因素有关。我们的目标是研究这些标量变量,以及捕获对奖励的神经反应的多个功能协变量,如何与未来的青少年抑郁症相关。从以往的研究通常依赖于简单的线性回归来建模所有协变量,我们提出了一个新的贝叶斯分位数回归框架。该方法构建了标量协变量和泛函协变量的单索引摘要,并结合了一个灵活捕获未知非线性关系和相互作用的单调链接函数。我们的方法解决了现有方法的几个局限性。它提供了一个类似于线性模型的临床可解释指标,确保估计的分位数保持在响应范围内,并在分位数回归分析中联合纳入了功能协变量的注册。我们的模拟研究表明,我们的方法优于现有的不受限制的基于单索引的方法,特别是当同时存在标量和预注册的函数协变量时。此外,我们利用一项大规模青少年抑郁症研究的数据,展示了我们的框架的实际效用,得出了与未来抑郁风险直接相关的神经奖励处理的新统计原则总结。
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引用次数: 0
期刊
Biometrics
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