Pub Date : 2012-04-11DOI: 10.1007/978-3-642-29066-4_3
Lars Rosenbaum, A. Jahn, A. Zell
{"title":"Optimizing the Edge Weights in Optimal Assignment Methods for Virtual Screening with Particle Swarm Optimization","authors":"Lars Rosenbaum, A. Jahn, A. Zell","doi":"10.1007/978-3-642-29066-4_3","DOIUrl":"https://doi.org/10.1007/978-3-642-29066-4_3","url":null,"abstract":"","PeriodicalId":90497,"journal":{"name":"Evolutionary computation, machine learning and data mining in bioinformatics. EvoBIO (Conference)","volume":"21 1","pages":"26-37"},"PeriodicalIF":0.0,"publicationDate":"2012-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"88970487","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2012-04-11DOI: 10.1007/978-3-642-29066-4_2
L. Manzoni, M. Castelli, L. Vanneschi
{"title":"Evolutionary Reaction Systems","authors":"L. Manzoni, M. Castelli, L. Vanneschi","doi":"10.1007/978-3-642-29066-4_2","DOIUrl":"https://doi.org/10.1007/978-3-642-29066-4_2","url":null,"abstract":"","PeriodicalId":90497,"journal":{"name":"Evolutionary computation, machine learning and data mining in bioinformatics. EvoBIO (Conference)","volume":"21 1","pages":"13-25"},"PeriodicalIF":0.0,"publicationDate":"2012-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"75699143","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2012-04-11DOI: 10.1007/978-3-642-29066-4_10
D. L. González-Álvarez, M. A. Vega-Rodríguez, J. Pulido, J. M. Sánchez-Pérez
{"title":"Comparing Multiobjective Artificial Bee Colony Adaptations for Discovering DNA Motifs","authors":"D. L. González-Álvarez, M. A. Vega-Rodríguez, J. Pulido, J. M. Sánchez-Pérez","doi":"10.1007/978-3-642-29066-4_10","DOIUrl":"https://doi.org/10.1007/978-3-642-29066-4_10","url":null,"abstract":"","PeriodicalId":90497,"journal":{"name":"Evolutionary computation, machine learning and data mining in bioinformatics. EvoBIO (Conference)","volume":"32 1","pages":"110-121"},"PeriodicalIF":0.0,"publicationDate":"2012-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84242646","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2012-04-11DOI: 10.1007/978-3-642-29066-4_21
Alfonso E. Márquez Chamorro, F. Divina, J. Aguilar-Ruiz, J. Bacardit, G. Asencio-Cortés, C. E. Santiesteban-Toca
{"title":"A NSGA-II Algorithm for the Residue-Residue Contact Prediction","authors":"Alfonso E. Márquez Chamorro, F. Divina, J. Aguilar-Ruiz, J. Bacardit, G. Asencio-Cortés, C. E. Santiesteban-Toca","doi":"10.1007/978-3-642-29066-4_21","DOIUrl":"https://doi.org/10.1007/978-3-642-29066-4_21","url":null,"abstract":"","PeriodicalId":90497,"journal":{"name":"Evolutionary computation, machine learning and data mining in bioinformatics. EvoBIO (Conference)","volume":"40 1","pages":"234-244"},"PeriodicalIF":0.0,"publicationDate":"2012-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"77686637","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2012-04-11DOI: 10.1007/978-3-642-29066-4_14
G. Asencio-Cortés, J. Aguilar-Ruiz, Alfonso E. Márquez Chamorro, Roberto Ruiz Sánchez, C. E. Santiesteban-Toca
{"title":"Prediction of Mitochondrial Matrix Protein Structures Based on Feature Selection and Fragment Assembly","authors":"G. Asencio-Cortés, J. Aguilar-Ruiz, Alfonso E. Márquez Chamorro, Roberto Ruiz Sánchez, C. E. Santiesteban-Toca","doi":"10.1007/978-3-642-29066-4_14","DOIUrl":"https://doi.org/10.1007/978-3-642-29066-4_14","url":null,"abstract":"","PeriodicalId":90497,"journal":{"name":"Evolutionary computation, machine learning and data mining in bioinformatics. EvoBIO (Conference)","volume":"59 1","pages":"156-167"},"PeriodicalIF":0.0,"publicationDate":"2012-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"80487107","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2012-04-11DOI: 10.1007/978-3-642-29066-4_16
A. Spirov, N. Golyandina, D. Holloway, T. Alexandrov, E. Spirova, Francisco J. P. Lopes
{"title":"Measuring Gene Expression Noise in Early Drosophila Embryos: The Highly Dynamic Compartmentalized Micro-environment of the Blastoderm Is One of the Main Sources of Noise","authors":"A. Spirov, N. Golyandina, D. Holloway, T. Alexandrov, E. Spirova, Francisco J. P. Lopes","doi":"10.1007/978-3-642-29066-4_16","DOIUrl":"https://doi.org/10.1007/978-3-642-29066-4_16","url":null,"abstract":"","PeriodicalId":90497,"journal":{"name":"Evolutionary computation, machine learning and data mining in bioinformatics. EvoBIO (Conference)","volume":"28 1","pages":"177-188"},"PeriodicalIF":0.0,"publicationDate":"2012-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"85372267","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2012-04-11DOI: 10.1007/978-3-642-29066-4_4
Christian Darabos, M. Giacobini, Ting Hu, J. Moore
{"title":"Lévy-Flight Genetic Programming: Towards a New Mutation Paradigm","authors":"Christian Darabos, M. Giacobini, Ting Hu, J. Moore","doi":"10.1007/978-3-642-29066-4_4","DOIUrl":"https://doi.org/10.1007/978-3-642-29066-4_4","url":null,"abstract":"","PeriodicalId":90497,"journal":{"name":"Evolutionary computation, machine learning and data mining in bioinformatics. EvoBIO (Conference)","volume":"45 1","pages":"38-49"},"PeriodicalIF":0.0,"publicationDate":"2012-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"78292107","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2012-04-11DOI: 10.1007/978-3-642-29066-4_9
L. Vanneschi, M. Mondini, Martino Bertoni, Alberto Ronchi, Mattia Stefano
{"title":"GeNet: A Graph-Based Genetic Programming Framework for the Reverse Engineering of Gene Regulatory Networks","authors":"L. Vanneschi, M. Mondini, Martino Bertoni, Alberto Ronchi, Mattia Stefano","doi":"10.1007/978-3-642-29066-4_9","DOIUrl":"https://doi.org/10.1007/978-3-642-29066-4_9","url":null,"abstract":"","PeriodicalId":90497,"journal":{"name":"Evolutionary computation, machine learning and data mining in bioinformatics. EvoBIO (Conference)","volume":"57 1","pages":"97-109"},"PeriodicalIF":0.0,"publicationDate":"2012-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"80969164","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2012-04-11DOI: 10.1007/978-3-642-29066-4_23
F. Cerutti, L. Bertolotti, T. Goldberg, M. Giacobini
{"title":"Improving Phylogenetic Tree Interpretability by Means of Evolutionary Algorithms","authors":"F. Cerutti, L. Bertolotti, T. Goldberg, M. Giacobini","doi":"10.1007/978-3-642-29066-4_23","DOIUrl":"https://doi.org/10.1007/978-3-642-29066-4_23","url":null,"abstract":"","PeriodicalId":90497,"journal":{"name":"Evolutionary computation, machine learning and data mining in bioinformatics. EvoBIO (Conference)","volume":"41 1","pages":"250-253"},"PeriodicalIF":0.0,"publicationDate":"2012-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"76160442","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2012-04-11DOI: 10.1007/978-3-642-29066-4_17
Delaney Granizo-MacKenzie, J. Moore
{"title":"Artificial Immune Systems Perform Valuable Work When Detecting Epistasis in Human Genetic Datasets","authors":"Delaney Granizo-MacKenzie, J. Moore","doi":"10.1007/978-3-642-29066-4_17","DOIUrl":"https://doi.org/10.1007/978-3-642-29066-4_17","url":null,"abstract":"","PeriodicalId":90497,"journal":{"name":"Evolutionary computation, machine learning and data mining in bioinformatics. EvoBIO (Conference)","volume":"7 4","pages":"189-200"},"PeriodicalIF":0.0,"publicationDate":"2012-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"91469845","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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