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New horizons in translational medicine最新文献

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Abstracts: 5th Annual Congress of the European Society for Translational Medicine (EUSTM-2017), 20-22 October 2017, Berlin, Germany 摘要:第五届欧洲转化医学学会年会(EUSTM-2017), 2017年10月20-22日,德国柏林
Pub Date : 2017-11-01 DOI: 10.1016/j.nhtm.2017.11.001
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引用次数: 0
PSO-ANN based diagnostic model for the early detection of dengue disease 基于粒子群神经网络的登革热早期诊断模型
Pub Date : 2017-11-01 DOI: 10.1016/J.NHTM.2017.10.001
Shalini Gambhir, S. K. Malik, Y. Kumar
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引用次数: 70
Synthesis of a series of new 6-nitrobenzofuran-2-carbohydrazide derivatives with cytotoxic and antioxidant activity 一系列具有细胞毒性和抗氧化活性的6-硝基苯并呋喃-2-碳肼衍生物的合成
Pub Date : 2017-11-01 DOI: 10.1016/J.NHTM.2017.08.002
M. Taha, Sadia Sultan, Mohamad Faisal Azlan, S. A. Shah, W. Jamil, S. Yeap, Syahrul Imran, M. Akhtar, S. Zareen, N. Ismail, Muhammad Ali
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引用次数: 3
Pros, cons and future of antibiotics 抗生素的利弊和未来
Pub Date : 2017-11-01 DOI: 10.1016/j.nhtm.2017.08.001
Elroy P. Weledji , Elizabeth K. Weledji , Jules C. Assob , Dickson S. Nsagha

The advantages of antibiotics have been most clearly seen in those acute bacterial infections which had a high mortality before the introduction of antibiotics. The reality of the potential harmful effects of antibiotics, both short term in individual patients and long term in favoring emergent resistance and opportunistic pathogens are discussed. Bacterial resistance makes the standard treatments ineffective, and increases the risk of infection spreading. The shortage of novel antibiotics has strengthened the efforts of genome sequencing to control bacterial resistance. The future would include novel approaches, based on a re-conceptualization of the nature of resistance, disease and prevention.

抗生素的优势在那些在使用抗生素之前死亡率很高的急性细菌感染中得到了最明显的体现。抗生素的潜在有害影响的现实,在个别患者的短期和长期有利于紧急耐药性和机会性病原体讨论。细菌耐药性使标准治疗无效,并增加了感染扩散的风险。新型抗生素的短缺加强了基因组测序控制细菌耐药性的努力。未来将包括基于对耐药性、疾病和预防性质重新概念化的新方法。
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引用次数: 21
Safety study of autologous adult bone marrow derived mesenchymal stromal cells in idiopathic pulmonary fibrosis - Pilot data 自体成人骨髓间充质间质细胞治疗特发性肺纤维化的安全性研究-先导数据
Pub Date : 2017-11-01 DOI: 10.1016/j.nhtm.2017.10.002
Lakshmi Kiran Chelluri , Upasna Upadhyay , Ravindra Nallagonda , Sudhir Prasad , Mohammad Samiuddin , Rajat Mohanty , Chandrashekar Mallarpu , Meenakshi Ponnana , Sindhoora Rawul , Eswara Prasad Chelluri

Background

Lung transplantation is the choice of therapy in severe cases of idiopathic pulmonary fibrosis (IPF) but is compounded with post-transplant complications. The paucity of deceased organ donations underlines the need for alternate approaches that improves the quality of life. Herein, we attempted to develop an autologous adult bone marrow derived mesenchymal stromal cell (BMSC) therapy via central line access, and evaluated the safety of a single dose (~13 × 106 cells/mL), in treating “no option” IPF.

Method

The study included severe IPF subjects (n = 6) both male and female, aged 40–70 years of age with a forced vital capacity <50%, diffusing capacity of lung for carbon monoxide (DLco) <35% of predicted, and/or oxygen (SpO2) saturation <88% on 6 min walk distance (6 MWD). BMSCs at passage 2 were suspended in 30.0 mL normal saline and dispensed through the central line route in a respiratory intensive care unit of Gleneagles Global Hospitals. The subjects were monitored for the first 24 h for serious adverse events and hemodynamic parameters. They were followed up periodically at intervals of 1, 4, and 9 months for safety and monitoring of adverse events, including secondary objectives of changes in pulmonary function test, DLco, 6 MWD, and quality of life as per the study protocol.

Results

It was observed that central line infusions were well tolerated by all subjects. Furthermore, there was an improved quality of life.

Conclusions

BMSC central line infusion in “no option” IPF cases provided an insight into the strategies in improving the quality of life for patient and thereby increasing the therapeutic window period for lung transplantation.

肺移植是特发性肺纤维化(IPF)重症病例的治疗选择,但移植后并发症复杂。死者器官捐献的缺乏强调了需要其他方法来提高生活质量。在本研究中,我们尝试通过中线通路开发一种自体成人骨髓间充质基质细胞(BMSC)疗法,并评估单剂量(~13 × 106细胞/mL)治疗“无选择”IPF的安全性。方法研究纳入重症IPF患者(n = 6),年龄40 ~ 70岁,强迫肺活量为50%,肺弥散量为预测值的35%,6 min步行距离(6 MWD)时肺氧饱和度为88%。在格伦伊格尔斯全球医院的呼吸重症监护室,将传代2的骨髓间充质干细胞悬浮在30.0 mL生理盐水中,并通过中央静脉输送。在前24小时监测受试者的严重不良事件和血流动力学参数。随访时间间隔为1、4和9个月,以监测不良事件的安全性,包括次要目标肺功能测试、DLco、6mwd和生活质量的变化。结果所有受试者均对中心静脉输注耐受良好。此外,生活质量也有所提高。结论sbmsc中心静脉输注在“无选择”IPF病例中提供了改善患者生活质量的策略,从而增加了肺移植的治疗窗口期。
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引用次数: 0
PSO-ANN based diagnostic model for the early detection of dengue disease 基于粒子群神经网络的登革热早期诊断模型
Pub Date : 2017-11-01 DOI: 10.1016/j.nhtm.2017.10.001
Shalini Gambhir , Sanjay Kumar Malik , Yugal Kumar

Large numbers of machine learning approaches have been developed for analysis of medical data in recent years. These approaches have also proved their significance through accurate and earlier diagnosis of diseases. The objective of this work is to develop a diagnostic model for earlier diagnosis of dengue disease. Dengue fever is spread through the bite of the female mosquito (Aedes aegypti). The symptoms of this fever are similar to other fever such as that of Viral influenza, Chikungunya, Zika fever, and so on. However, in this fever, human life can be at risk due to severe depletion of blood platelets. Therefore, early diagnosis of dengue disease can help in protecting human lives by making a preventive move before it turns into an infectious disease. In this work, an effort is made to develop a PSO-ANN based diagnostic model for earlier diagnosis of dengue fever. In the proposed model, PSO technique is applied to optimize the weight and bias parameters of ANN method. Further, PSO optimized ANN approach is used to detect dengue patients. The effectiveness of the proposed model is evaluated based on accuracy, sensitivity, specificity, error rate and AUC parameters. The results of the proposed model have been compared with other existing approaches like ANN, DT, NB, and PSO. It is observed that the proposed diagnostic model is a proficient and powerful model for more accurate and earlier detection of dengue fever.

近年来,大量的机器学习方法被开发出来用于分析医疗数据。这些方法也通过准确和早期诊断疾病证明了它们的重要性。这项工作的目的是开发一个早期诊断登革热疾病的诊断模型。登革热通过雌蚊(埃及伊蚊)的叮咬传播。这种发烧的症状与其他发烧类似,如病毒性流感、基孔肯雅热、寨卡热等。然而,在这种发烧中,由于血小板的严重消耗,人的生命可能处于危险之中。因此,登革热的早期诊断可以通过在其转变为传染病之前采取预防措施来帮助保护人类生命。在这项工作中,努力建立一个基于PSO-ANN的登革热早期诊断模型。在该模型中,采用粒子群算法对神经网络方法的权重和偏置参数进行优化。进一步,采用粒子群优化的神经网络方法对登革热患者进行检测。基于准确率、灵敏度、特异性、错误率和AUC参数对该模型的有效性进行了评价。将该模型的结果与其他现有方法如ANN、DT、NB和PSO进行了比较。观察到,所提出的诊断模型是一个更准确和更早发现登革热的熟练和强大的模型。
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引用次数: 69
Improving disease diagnosis by a new hybrid model 用一种新的混合模型提高疾病诊断
Pub Date : 2017-11-01 DOI: 10.1016/j.nhtm.2017.07.001
Bikash Kanti Sarkar

Knowledge extraction is an important part of e-Health system. However, datasets in health domain are highly imbalanced, voluminous, conflicting and complex in nature, and these can lead to erroneous diagnosis of diseases. So, designing accurate and robust clinical diagnosis models for such datasets is a challenging task in data mining. In literature, numerous standard intelligent models have been proposed for this purpose but they usually suffer from several drawbacks like lack of understandability, incapability of operating rare cases, inefficiency in making quick and correct decision, etc. In fact, specific health application using standard intelligent methods may not satisfy multiple criteria. However, recent research indicates that hybrid intelligent methods (integrating several standard ones, can achieve better performance for health applications. Addressing the limitations of the existing approaches, the present research introduces a new hybrid predictive model (integrating C4.5 and PRISM learners) for diagnosing effectively the diseases (instead of any specific disease) in comprehensible way by the practitioners with better prediction results in comparison to the traditional approaches. The empirical results (in terms of accuracy, sensitivity and false positive rate) obtained over fourteen benchmark datasets demonstrate that the model outperforms the base learners in almost all cases. The performance of the model also claims that it can be good alternative to the specialized learners (each designed for specific disease) published in the literature. After all, the presented intelligent system is effective in undertaking medical data classification task.

知识抽取是电子医疗系统的重要组成部分。然而,卫生领域的数据集高度不平衡、数量庞大、相互冲突和复杂,这可能导致疾病的错误诊断。因此,为这些数据集设计准确、鲁棒的临床诊断模型是数据挖掘中的一项具有挑战性的任务。在文献中,为此提出了许多标准的智能模型,但它们通常存在一些缺点,如缺乏可理解性,无法处理罕见情况,无法快速正确地做出决策等。事实上,使用标准智能方法的特定健康应用可能无法满足多个标准。然而,最近的研究表明,混合智能方法(集成多个标准智能方法)可以在健康应用中获得更好的性能。针对现有方法的局限性,本研究引入了一种新的混合预测模型(集成C4.5和PRISM学习器),用于从业者以可理解的方式有效诊断疾病(而不是任何特定疾病),与传统方法相比,预测结果更好。在14个基准数据集上获得的经验结果(在准确性、灵敏度和假阳性率方面)表明,该模型在几乎所有情况下都优于基础学习器。该模型的性能还表明,它可以很好地替代文献中发表的专门学习器(每种学习器都是针对特定疾病设计的)。总之,所提出的智能系统能够有效地完成医疗数据分类任务。
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引用次数: 1
Synthesis of a series of new 6-nitrobenzofuran-2-carbohydrazide derivatives with cytotoxic and antioxidant activity 一系列具有细胞毒性和抗氧化活性的6-硝基苯并呋喃-2-碳肼衍生物的合成
Pub Date : 2017-11-01 DOI: 10.1016/j.nhtm.2017.08.002
Muhammad Taha , Sadia Sultan , Mohamad Azlan , Syed Adnan Ali Shah , Waqas Jamil , Swee Keong Yeap , Syahrul Imran , Muhammad Nadeem Akhtar , Seema Zareen , Nor Hadiani Ismail , Muhammad Ali

6-nitrobenzofuran-2-carbohydrazide Schiff base derivatives have been synthesized and their structure has been confirmed via H1NMR, Mass spectrometry and elemental (CHN/S) analysis. These synthesized analogs showed significant cytotoxic and antioxidant activity. Doxorubicin (IC50 = 0.94 ± 0.20 μM) and n-propyl gallate (IC50 = 30.30 ± 0.40 μM) were used as standard in cytotoxic and antioxidant activities, respectively. Compound 1 (IC50 = 3.30 ± 0.90 μM), 2 (IC50 = 2.70 ± 0.25 μM), 3 (IC50 = 2.70 ± 0.25 μM), 10 (IC50 = 2.70 ± 1.10 μM), 11 (IC50 = 1.00 ± 1.20 μM), and 17 (IC50 = 3.75 ± 0.90 μM) showed excellent while 21 (IC50 = 7.50 ± 0.60 μM) and 28 (IC50 = 7.50 ± 0.66 μM) showed moderate anti cancer activity. Furthermore, compound 10 (IC50 = 17.50 ± 0.85 μM), 11 (IC50 = 24.20 ± 0.55 μM), 12 (IC50 = 21.10 ± 1.58 μM), 13 (IC50 = 14.60 ± 0.32 μM), 14 (IC50 = 29.20 ± 0.75 μM) and 15 (IC50 = 9.26 ± 0.15 μM) showed better antioxidant activity than the standard n-propyl gallate. This study will be useful to develop potential lead molecules with cytotoxic and antioxidant potential.

合成了6-硝基苯并呋喃-2-碳酰肼希夫碱衍生物,并通过H1NMR、质谱和元素(CHN/S)分析对其结构进行了确证。这些合成的类似物具有显著的细胞毒性和抗氧化活性。以阿霉素(IC50 = 0.94±0.20 μM)和没食子酸正丙酯(IC50 = 30.30±0.40 μM)作为细胞毒性和抗氧化活性的标准。化合物1 (IC50 = 3.30±0.90 μM)、2 (IC50 = 2.70±0.25 μM)、3 (IC50 = 2.70±0.25 μM)、10 (IC50 = 2.70±1.10 μM)、11 (IC50 = 1.00±1.20 μM)和17 (IC50 = 3.75±0.90 μM)表现出优异的抗癌活性,而化合物21 (IC50 = 7.50±0.60 μM)和28 (IC50 = 7.50±0.66 μM)表现出中等的抗癌活性。化合物10 (IC50 = 17.50±0.85 μM)、11 (IC50 = 24.20±0.55 μM)、12 (IC50 = 21.10±1.58 μM)、13 (IC50 = 14.60±0.32 μM)、14 (IC50 = 29.20±0.75 μM)和15 (IC50 = 9.26±0.15 μM)的抗氧化活性均优于标准的没食子酸正丙酯。该研究将有助于开发具有细胞毒性和抗氧化潜力的潜在铅分子。
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引用次数: 3
Safety study of autologous adult bone marrow derived mesenchymal stromal cells in idiopathic pulmonary fibrosis - Pilot data 自体成人骨髓间充质间质细胞治疗特发性肺纤维化的安全性研究-先导数据
Pub Date : 2017-11-01 DOI: 10.1016/J.NHTM.2017.10.002
L. Chelluri, Upasna Upadhyay, Ravindra Nallagonda, Sudhir Prasad, Mohammad Samiuddin, Rajat Mohanty, C. Mallarpu, M. Ponnana, Sindhoora Rawul, Eswara Prasad Chelluri
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引用次数: 0
Association of bone morphogenic protein 4 gene polymorphism and left ventricle hypertrophy in diabetic chronic kidney disease patients: A pilot study 骨形态发生蛋白4基因多态性与糖尿病慢性肾病患者左心室肥厚的相关性:一项初步研究
Pub Date : 2017-03-01 DOI: 10.1016/j.nhtm.2017.02.001
Safreen Shaikh Dawood Amanulla , S.A. Akash , John Robert , Kumaresan Ramanathan , Giri Padmanabhan , Bhooma Vijayaraghavan

Background

The Bone Morphogenetic Protein 4 (BMP4) is identified to play a significant role in cardiac remodelling; gene polymorphism and its resulting associations with Left Ventricular Hypertrophy (LVH) in diabetic Chronic Kidney Disease (CKD) patients of this protein are yet to be established.

Aim

To analyse the association between BMP4 gene polymorphism and LVH in diabetic CKD patients.

Materials and methods

Isolation of DNA from whole blood samples of 50 patients each; patients diagnosed LVH with diabetic CKD and also from LVH patients without diabetic CKD, diabetic CKD without LVH and also normal patients as control were extracted. The gene of interest (BMP4 gene) purified from various samples digested using zero-cutter restriction endonucleases (Hind III and Bam HI) by employing the Restriction Fragment Length Polymorphism (RFLP) technique. The restriction has been analysed using 1% agarose gel Electrophoresis.

Results

The gene from patient having LVH without diabetic CKD when digested with Hind III showed fragmentation, more specifically, it presented three/four fragments which were at a comparable distance corresponding with the following size reference markers at 2000 bp(few cases), 1500 bp, between 700–600 bp and the last one near 100 bp. This fragmentation pattern was repeated identically for the gene from blood sample of patient having LVH with diabetic CKD which was also digested with Hind III. A similar fragmentation was not visualized for sample from patient having diabetic CKD without LVH when digested with Hind III. But no such fragments were noted for the samples from the same patients when digested with Bam HI.

Conclusion

BMP4 gene polymorphism has been confirmed in patients having LVH regardless of the presence or absence of diabetic CKD along with it.

Focal points

  • Benchside:

Left ventricular (LV) hypertrophy is a strong autonomous predictor of increased cardiovascular morbidity and mortality in clinical and population-based samples. Thus understanding the correlation of LVH with BMP4 gene is necessitated to provide alternate therapeutics strategy at genome level. Eventually, genetic investigations provide high assurance for future prevention, early intervention and treatment of this major public health issue.

  • Bedside:

Determination of BMP4 Polymorphism would raise a new drug development target using single nucleotide polymorphism. They also serve as molecular marker for next generation therapeutics of personalized medicine at genome level.

骨形态发生蛋白4 (Bone Morphogenetic Protein 4, BMP4)在心脏重构中起重要作用;该蛋白在糖尿病慢性肾脏疾病(CKD)患者中的基因多态性及其与左心室肥厚(LVH)的相关性尚不清楚。目的分析糖尿病CKD患者BMP4基因多态性与LVH的关系。材料与方法50例患者全血DNA分离;提取诊断为LVH合并糖尿病性CKD的患者、无糖尿病性CKD的LVH患者、无LVH的糖尿病性CKD患者以及作为对照的正常患者。利用限制性片段长度多态性(RFLP)技术,从使用零切刀限制性内切酶(Hind III和Bam HI)酶切的各种样品中纯化出目标基因(BMP4基因)。用1%琼脂糖凝胶电泳法对其进行分析。结果经Hind III酶切的LVH无糖尿病CKD患者基因片段化程度较高,分别在2000 bp(少数)、1500 bp、700-600 bp和100 bp附近出现3 / 4个片段,与以下大小参考标记的距离相当。同样用Hind III消化的LVH合并糖尿病CKD患者血液样本的基因也重复了这种片段模式。在没有LVH的糖尿病CKD患者的样本中,当Hind III消化时,没有看到类似的碎片。但是,当用Bam HI消化同一患者的样本时,没有发现这样的片段。结论bmp4基因多态性在LVH患者中已得到证实,无论是否伴有糖尿病性CKD。•试验台:在临床和基于人群的样本中,左心室(LV)肥厚是心血管发病率和死亡率增加的一个强有力的自主预测因子。因此,了解LVH与BMP4基因的相关性,有必要在基因组水平上提供替代治疗策略。最终,基因调查为今后预防、早期干预和治疗这一重大公共卫生问题提供了高度保证。•床边:BMP4多态性的测定将利用单核苷酸多态性提出一个新的药物开发目标。它们还可以作为下一代基因组水平个性化医疗治疗的分子标记。•社区:患者的治疗质量将会很高,因为有针对性的方法和个性化医疗的理解。这可以防止不必要的治疗,可能导致系统中的副作用。•政府:资助机构应继续承认BMP4基因在LVH中发挥作用的重要性,LVH可能是许多其他心脏疾病的病原体。随着时间的推移,这将有助于患者和医疗机构受益。
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引用次数: 0
期刊
New horizons in translational medicine
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