Pub Date : 2015-05-01DOI: 10.1016/j.nhtm.2015.07.045
Alan M. Elder , Davin M. Henderson , Amy V. Nalls , Anthony E. Kincaid , Edward A. Hoover , Jason C. Bartz , Candace K. Mathiason
Transmissible spongiform encephalopathies (TSEs), or prion diseases, affecting human and animal species can be transmitted from TSE-infected individuals to naïve susceptible hosts during the long asymptomatic (years to decades) and symptomatic disease stages. The presence of infectious hematogenous prions in asymptomatic TSE-infected hosts demonstrates the highly infectious nature of blood-borne prions in hosts lacking overt clinical symptoms. It is currently unknown when and how infectious prions first enter the blood following initial exposure. We have previously shown that the whole-blood real-time quaking-induced conversion assay (wbRT-QuIC) possesses 100% specificity and >92% sensitivity, making it an ideal tool to address this question. Here, we use wbRT-QuIC to analyze whole blood collected from oral, extranasal or aerosol TSE-exposed hosts for blood-borne prions. Our results demonstrate that conversion competent prions in the inoculum are capable of crossing mucosal surfaces and entering the circulatory system within 30 min—no matter the route of exposure. Detection of the inoculum minutes post exposure is followed by a steady decline in the detection of blood-borne prions up to 3 days which is followed by a progressive increase in the detection of nascent conversion competent prions between 1 and 17 months post exposure. These data provide the first evidence for the facile transport of mucosally acquired prions into the circulatory system, providing evidence for multiple routes of inter- and intra- host prion trafficking and shedding.
{"title":"Longitudinal analysis of blood-borne prion infection","authors":"Alan M. Elder , Davin M. Henderson , Amy V. Nalls , Anthony E. Kincaid , Edward A. Hoover , Jason C. Bartz , Candace K. Mathiason","doi":"10.1016/j.nhtm.2015.07.045","DOIUrl":"10.1016/j.nhtm.2015.07.045","url":null,"abstract":"<div><p><span>Transmissible spongiform encephalopathies<span> (TSEs), or prion diseases, affecting human and animal species can be transmitted from TSE-infected individuals to naïve susceptible hosts during the long asymptomatic (years to decades) and symptomatic disease stages. The presence of infectious hematogenous prions in asymptomatic TSE-infected hosts demonstrates the highly infectious nature of blood-borne prions in hosts lacking overt clinical symptoms. It is currently unknown when and how infectious prions first enter the blood following initial exposure. We have previously shown that the whole-blood real-time quaking-induced conversion assay (wbRT-QuIC) possesses 100% specificity and >92% sensitivity, making it an ideal tool to address this question. Here, we use wbRT-QuIC to analyze whole blood collected from oral, extranasal or aerosol TSE-exposed hosts for blood-borne prions. Our results demonstrate that conversion competent prions in the inoculum are capable of crossing mucosal surfaces<span> and entering the circulatory system within 30</span></span></span> <!-->min—no matter the route of exposure. Detection of the inoculum minutes post exposure is followed by a steady decline in the detection of blood-borne prions up to 3 days which is followed by a progressive increase in the detection of nascent conversion competent prions between 1 and 17 months post exposure. These data provide the first evidence for the facile transport of mucosally acquired prions into the circulatory system, providing evidence for multiple routes of inter- and intra- host prion trafficking and shedding.</p></div>","PeriodicalId":90660,"journal":{"name":"New horizons in translational medicine","volume":"2 4","pages":"Page 128"},"PeriodicalIF":0.0,"publicationDate":"2015-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.nhtm.2015.07.045","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87327988","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cardiomyocyte enrichment strategies so far have not yielded scalable cardiac specific cell type. More so, the current data is restricted to embryonic stem cells (ESCs)/induced pluripotent stem cells (iPSCs), wherein the use of viral vectors is fraught with increased risk during clinical use. Herein, we profiled time-dependent gene/protein expression patterns across the cardiac ectoderm, endoderm, and mesoderm for isolating cardiac precursors from human adipose derived stem cells (hADSC).
Methods
Direct cardiac differentiation of hADSCs was carried out with 5-azacytidine and basic fibroblast growth factor (bFGF) in a one month long culture. The cells were periodically harvested, analyzed for unique persistent markers and their inherent regulation using quantitative polymerase chain reaction (qPCR), flow cytometry, immunoblot and immunocytochemistry assays. The identified markers were super paramagnetic iron oxide nanoparticle (SPION) tagged for segregation by magnetic activated cell sorting (MACS) and further evaluated their differentiation potential and checked for the purity by flow cytometry.
Results
The results demonstrated pronounced up-regulation of mesodermal and mature cardiac lineage markers at three weeks, while there was a down-regulation of pluripotent stem cell markers. This perhaps could be attributed to de-differentiation in maintaining the cardiac phenotype. However, signal regulatory protein alpha (SIRPA) and kinase domain receptor (KDR) persisted all through the culture period of one month, making them the most relevant and reliable cardiac specific markers. Dual labeling of these markers to SPION for cardiomyocyte enrichment by MACS column yielded cardiomyogenic-like cells in differentiation cultures with several functional positive markers.
Conclusions
Thus, SIRPA and KDR together provide cues in the enhancement and up-scaling of cardiomyocyte production in the cell replacement therapy.
Focal points
•
Benchside
Identification of specific cell phenotypic markers to identify cardiac precursors in any tissue source with minimal cell manipulation is a novel process development tool in clinical translation.
•
Bedside
A product developed in a closed system would minimize extraneous contaminants in long term cultures and development of such procedures minimizes culture failure rates from bench side.
•
Industry
This unique identification of cell-specific marker would enable a tissue-specific translational plan and immensely help in the cardiac regeneration.
{"title":"Signal regulatory protein alpha (SIRPA) and kinase domain receptor (KDR) are key expression markers in cardiac specific precursor selection from hADSCs","authors":"Vinod Kumar Verma , Syed Sultan Beevi , Tanya Debnath , Usha Shalini , Suguna Ratnakar Kamaraju , Lakshmi Kumari Kona , Yamuna Mohanram , Lakshmi Kiran Chelluri","doi":"10.1016/j.nhtm.2015.02.001","DOIUrl":"10.1016/j.nhtm.2015.02.001","url":null,"abstract":"<div><h3>Background</h3><p><span>Cardiomyocyte enrichment strategies so far have not yielded scalable cardiac specific cell type. More so, the current data is restricted to </span>embryonic stem cells<span><span> (ESCs)/induced pluripotent stem cells (iPSCs), wherein the use of viral vectors is fraught with increased risk during clinical use. Herein, we profiled time-dependent gene/protein expression patterns across the cardiac ectoderm, </span>endoderm<span>, and mesoderm<span> for isolating cardiac precursors from human adipose derived stem cells (hADSC).</span></span></span></p></div><div><h3>Methods</h3><p><span><span>Direct cardiac differentiation of hADSCs<span> was carried out with 5-azacytidine and basic fibroblast growth factor (bFGF) in a one month long culture. The cells were periodically harvested, analyzed for unique persistent markers and their inherent regulation using quantitative polymerase chain reaction (qPCR), flow cytometry, </span></span>immunoblot<span> and immunocytochemistry assays. The identified markers were </span></span>super paramagnetic iron oxide nanoparticle<span> (SPION) tagged for segregation by magnetic activated cell sorting (MACS) and further evaluated their differentiation potential and checked for the purity by flow cytometry.</span></p></div><div><h3>Results</h3><p><span>The results demonstrated pronounced up-regulation of mesodermal and mature cardiac lineage markers<span> at three weeks, while there was a down-regulation of pluripotent stem cell markers. This perhaps could be attributed to de-differentiation in maintaining the cardiac phenotype. However, signal </span></span>regulatory protein alpha (SIRPA) and kinase domain receptor (KDR) persisted all through the culture period of one month, making them the most relevant and reliable cardiac specific markers. Dual labeling of these markers to SPION for cardiomyocyte enrichment by MACS column yielded cardiomyogenic-like cells in differentiation cultures with several functional positive markers.</p></div><div><h3>Conclusions</h3><p>Thus, SIRPA and KDR together provide cues in the enhancement and up-scaling of cardiomyocyte production in the cell replacement therapy.</p></div><div><h3>Focal points</h3><p></p><ul><li><span>•</span><span><p>Benchside</p><p>Identification of specific cell phenotypic markers to identify cardiac precursors in any tissue source with minimal cell manipulation is a novel process development tool in clinical translation.</p></span></li><li><span>•</span><span><p>Bedside</p><p>A product developed in a closed system would minimize extraneous contaminants in long term cultures and development of such procedures minimizes culture failure rates from bench side.</p></span></li><li><span>•</span><span><p>Industry</p><p>This unique identification of cell-specific marker would enable a tissue-specific translational plan and immensely help in the cardiac regeneration.</p></span></li><li><span>•</span><span><p>Government</p><p>Financial inve","PeriodicalId":90660,"journal":{"name":"New horizons in translational medicine","volume":"2 4","pages":"Pages 93-101"},"PeriodicalIF":0.0,"publicationDate":"2015-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.nhtm.2015.02.001","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"78417284","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-05-01DOI: 10.1016/j.nhtm.2015.07.043
Nguyen C, Burton T, Kuklinski W, Gray M, Foy BD
Presently there are limited options for controlling the transmission of West Nile virus (WNV), including the use of larvicides and adulticides to target the mosquito vector. However, these methods are poorly-targeted, restricted to wealthy semi-urban and urban areas that are able to fund the efforts, and opposed in some communities due to toxicity concerns. This study evaluated the use of endectocide-treated bird feed to control WNV transmission by targeting the primary vector in Colorado, Culex tarsalis. Ivermectin susceptibility in C. tarsalis was first measured through ivermectin-spiked bloodmeals fed using membrane feeders, and the LC50 was determined to be 49.94 ng/ml (39.71-59.93 95% CI, n=988). Chickens were then fed ivermectin-treated feed to examine its safety and palatability, and mosquitoes were blood fed directly on the chickens to assess in vivo effects. Finally, ivermectin pharmokinetics were analyzed using vein blood from chickens as well the C. tarsalis that bloodfed on the chickens. A mixture of 200 mg ivermectin/kg of bird feed was determined to be a palatable and safe dose on which chickens would feed while also being effective in killing C. tarsalis in bioassays. Pharmacokinetic data from the in vivo tests produced conflicting results compared to in vitro blood feeds but drug was detected in chicken blood at concentrations that may be expected to affect C. tarsalis. Dosing, safety, and bioassays are currently being conducted in doves and sparrows. Additional studies are currently determining the effect of ivermectin on mortality in WNV-infected mosquitoes, as well as if ivermectin reduces WNV replication and transmission. Our study indicates that the use of ivermectin-treated bird feed could be a novel method of controlling WNV transmission.
{"title":"Ivermectin for the Control of West Nile Virus Transmission","authors":"Nguyen C, Burton T, Kuklinski W, Gray M, Foy BD","doi":"10.1016/j.nhtm.2015.07.043","DOIUrl":"10.1016/j.nhtm.2015.07.043","url":null,"abstract":"<div><p><span><span>Presently there are limited options for controlling the transmission of West Nile virus (WNV), including the use of </span>larvicides and adulticides to target the mosquito vector. However, these methods are poorly-targeted, restricted to wealthy semi-urban and urban areas that are able to fund the efforts, and opposed in some communities due to toxicity concerns. This study evaluated the use of endectocide-treated bird feed to control WNV transmission by targeting the primary vector in Colorado, </span><em>Culex tarsalis.</em><span> Ivermectin susceptibility in </span><em>C. tarsalis</em> was first measured through ivermectin-spiked bloodmeals fed using membrane feeders, and the LC<sub>50</sub><span> was determined to be 49.94 ng/ml (39.71-59.93 95% CI, n=988). Chickens were then fed ivermectin-treated feed to examine its safety and palatability, and mosquitoes were blood fed directly on the chickens to assess in vivo effects. Finally, ivermectin pharmokinetics were analyzed using vein blood from chickens as well the </span><em>C. tarsalis</em> that bloodfed on the chickens. A mixture of 200<!--> <!-->mg ivermectin/kg of bird feed was determined to be a palatable and safe dose on which chickens would feed while also being effective in killing <em>C. tarsalis</em><span> in bioassays. Pharmacokinetic<span> data from the in vivo tests produced conflicting results compared to in vitro blood feeds but drug was detected in chicken blood at concentrations that may be expected to affect C. tarsalis. Dosing, safety, and bioassays are currently being conducted in doves and sparrows. Additional studies are currently determining the effect of ivermectin on mortality in WNV-infected mosquitoes, as well as if ivermectin reduces WNV replication and transmission. Our study indicates that the use of ivermectin-treated bird feed could be a novel method of controlling WNV transmission.</span></span></p></div>","PeriodicalId":90660,"journal":{"name":"New horizons in translational medicine","volume":"2 4","pages":"Page 127"},"PeriodicalIF":0.0,"publicationDate":"2015-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.nhtm.2015.07.043","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"75310126","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-05-01DOI: 10.1016/j.nhtm.2015.07.055
Rico A , Phillips A , Schountz T , Toth A , Jarvis D , Powers A , Olson K
Alphaviruses are globally distributed, mosquito borne pathogens that cause death and disease in vertebrates, including humans. Therapeutics to combat alphaviral disease are non-existant and only a handful of IND status vaccines are available. Of the available vaccines most are associated with a poor immunological response and a high rate of reactivity, and none protects against more than a single alphavirus species. We designed and tested novel alphavirus vaccines comprised of the E1 glycoproteins of western equine encephalitis virus (WEEV) or Venezuelan equine encephalitis virus (VEEV). Immunization with cationic lipid nucleic acid complexes (CLNCs) and alphavirus E1ecto mixture (lipid-antigen-nucleic acid complexes:LANACs) provided significant protection in mice challenged with either WEEV, VEEV or eastern equine encephalitis virus (EEEV) regardless of challenge route. LANAC immunized mice mount a strong humoral immune response lacking neutralizing antibody. Passive transfer of immune sera from LANAC immunized mice to non-immunized mice confers protection to challenge, indicating that non-neutralizing antibody is sufficient for protection. In summary, our LANAC vaccine has both therapeutic and prophylactic potential and is able to offer protection against distinct alphavirus species irrespective of the route of infection.
{"title":"Alphavirus E1 Glycoprotein-Liposome-Nucleic Acid Complexes Protect Mice from Lethal Challenge with Multiple Alphaviruses","authors":"Rico A , Phillips A , Schountz T , Toth A , Jarvis D , Powers A , Olson K","doi":"10.1016/j.nhtm.2015.07.055","DOIUrl":"10.1016/j.nhtm.2015.07.055","url":null,"abstract":"<div><p><span>Alphaviruses are globally distributed, mosquito borne </span>pathogens<span> that cause death and disease in vertebrates, including humans. Therapeutics to combat alphaviral disease are non-existant and only a handful of IND status vaccines are available. Of the available vaccines most are associated with a poor immunological response and a high rate of reactivity, and none protects against more than a single alphavirus species. We designed and tested novel alphavirus vaccines comprised of the E1 glycoproteins<span><span> of western equine encephalitis virus (WEEV) or </span>Venezuelan equine encephalitis virus<span> (VEEV). Immunization with cationic lipid nucleic acid<span> complexes (CLNCs) and alphavirus E1ecto mixture (lipid-antigen-nucleic acid complexes:LANACs) provided significant protection in mice challenged with either WEEV, VEEV or eastern equine encephalitis virus<span> (EEEV) regardless of challenge route. LANAC immunized mice mount a strong humoral immune response<span> lacking neutralizing antibody. Passive transfer of immune sera from LANAC immunized mice to non-immunized mice confers protection to challenge, indicating that non-neutralizing antibody is sufficient for protection. In summary, our LANAC vaccine has both therapeutic and prophylactic potential and is able to offer protection against distinct alphavirus species irrespective of the route of infection.</span></span></span></span></span></span></p></div>","PeriodicalId":90660,"journal":{"name":"New horizons in translational medicine","volume":"2 4","pages":"Pages 130-131"},"PeriodicalIF":0.0,"publicationDate":"2015-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.nhtm.2015.07.055","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"86911046","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-05-01DOI: 10.1016/j.nhtm.2015.07.039
Miller A , Traina-Dorge V , Blackmon A , Wellish M , Deharo E , Gilden D , Mahalingam R
Varicella zoster virus (VZV) causes varicella (chickenpox), establishes latency in ganglia and reactivates decades later to produce zoster in the elderly. Clinical, pathological, immunological and virological features of simian varicella virus (SVV) infection of primates parallel human VZV infection. Primary SVV infection of primates, cause varicella, after which virus becomes latent in ganglionic neurons and reactivates upon social and environmental stress. Five rhesus macaques were infected intrabronchially with 4.0x105 pfu of SVV. Two weeks later, the monkeys developed varicella rash. Twenty months later four of the monkeys were treated once with a 50mg/kg of anti-CD4 antibody. All 5 monkeys developed zoster rash, 7–55 days after the treatment. Punch biopsies of the skin rash were analyzed for the presence of SVV antigens by immunohistochemistry and immunofluorescence. SVV ORF 63 protein and glycoproteins gH and L were detected in sweat glands in skin from all 5 monkeys. Presence of SVV in the β-3-tubilin-positive nerve endings in affected skin suggested possible route of skin infection during zoster.
{"title":"Simian varicella virus is present in skin tissue of rhesus macaques after experimental reactivation","authors":"Miller A , Traina-Dorge V , Blackmon A , Wellish M , Deharo E , Gilden D , Mahalingam R","doi":"10.1016/j.nhtm.2015.07.039","DOIUrl":"10.1016/j.nhtm.2015.07.039","url":null,"abstract":"<div><p><span>Varicella zoster virus<span><span> (VZV) causes varicella (chickenpox), establishes latency in ganglia and reactivates decades later to produce </span>zoster<span> in the elderly. Clinical, pathological, immunological and virological features of simian varicella virus (SVV) infection of primates parallel human VZV infection. Primary SVV infection of primates, cause varicella, after which virus becomes latent in ganglionic neurons and reactivates upon social and environmental stress. Five rhesus macaques were infected intrabronchially with 4.0x10</span></span></span><sup>5</sup><span> pfu of SVV. Two weeks later, the monkeys developed varicella rash. Twenty months later four of the monkeys were treated once with a 50</span> <span><span><span>mg/kg of anti-CD4 antibody. All 5 monkeys developed zoster rash, 7–55 days after the treatment<span>. Punch biopsies of the skin rash were analyzed for the presence of SVV antigens by </span></span>immunohistochemistry and </span>immunofluorescence<span>. SVV ORF 63 protein and glycoproteins<span> gH and L were detected in sweat glands<span> in skin from all 5 monkeys. Presence of SVV in the β-3-tubilin-positive nerve endings in affected skin suggested possible route of skin infection during zoster.</span></span></span></span></p></div>","PeriodicalId":90660,"journal":{"name":"New horizons in translational medicine","volume":"2 4","pages":"Page 126"},"PeriodicalIF":0.0,"publicationDate":"2015-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.nhtm.2015.07.039","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87317669","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-05-01DOI: 10.1016/j.nhtm.2015.07.061
Barton DJ, Kempf BJ, Cooper DA.
Poliovirus eradication is one of the most challenging public health endeavors in modern times (www.polioeradication.org). Social, political, economic & scientific factors have made this goal elusive. When eradication goals were first established in 1988, there was little appreciation of viral RNA recombination, enterovirus species groups and their relevance to eradication. Now, it is clear that RNA recombination between live-attenuated vaccine strains of poliovirus and non-polio group C enteroviruses results in circulating vaccine-derived polioviruses (cVDPV) and corresponding outbreaks of paralytic disease, a significant obstacle to eradication. By understanding enterovirus species groups, it becomes clear that poliovirus capsid proteins can be eradicated; however, the remainder of poliovirus RNA genomes will survive indefinitely in other group C enteroviruses. To help address these obstacles to eradication, the Barton lab studies molecular features of 3Dpol involved in viral RNA replication and recombination. A dsRNA clamp of 3Dpol that holds RNA products of replication as they exit the polymerase plays important roles in the polyadenylation of viral RNA, the fidelity of RNA replication, ribavirin sensitivity and viral RNA recombination. In other experiments, we identified a group C enterovirus RNA involved in the inhibition of ribonuclease L, an antiviral endoribonuclease. The RNase L ciRNA plays important but largely unexplored roles in pathogenesis. Using novel deep sequencing methods, we found that RNase L targets viral RNA encoding neutralizing epitopes of capsid proteins, sparing most other regions of viral RNA. These data suggest an important interplay between neutralizing antibodies, neutralization escape mutations and antiviral endoribonucleases. A better understanding of viral RNA recombination, enterovirus species groups and antiviral endoribonucleases should help achieve and maintain poliovirus eradication.
根除脊髓灰质炎病毒是现代最具挑战性的公共卫生努力之一(www.polioeradication.org)。社会、政治、经济;科学因素使得这一目标难以实现。当1988年首次确定根除目标时,很少有人认识到病毒RNA重组、肠道病毒种类群及其与根除的相关性。现在,很明显,脊髓灰质炎病毒减毒活疫苗株和非脊髓灰质炎C组肠病毒之间的RNA重组导致循环疫苗衍生脊髓灰质炎病毒(cVDPV)和相应的麻痹性疾病暴发,这是根除脊髓灰质炎的一个重大障碍。通过了解肠道病毒种类群,脊髓灰质炎病毒衣壳蛋白可以被根除变得很清楚;然而,其余的脊髓灰质炎病毒RNA基因组将在其他C组肠病毒中无限期存活。为了帮助消除这些障碍,Barton实验室研究了3Dpol参与病毒RNA复制和重组的分子特征。3Dpol的dsRNA钳在RNA产物离开聚合酶时将其固定在一起,在病毒RNA的多聚腺苷化、RNA复制的保真度、利巴韦林敏感性和病毒RNA重组等方面发挥重要作用。在其他实验中,我们发现C组肠病毒RNA参与核糖核酸酶L的抑制,核糖核酸酶L是一种抗病毒核糖核酸内酶。RNase L ciRNA在发病机制中起着重要的作用,但在很大程度上尚未被探索。利用新的深度测序方法,我们发现RNase L靶向编码衣壳蛋白中和表位的病毒RNA,从而保留了病毒RNA的大多数其他区域。这些数据表明,中和抗体、中和逃逸突变和抗病毒核糖核酸内切酶之间存在重要的相互作用。更好地了解病毒RNA重组、肠道病毒种类群和抗病毒核糖核酸内切酶,应该有助于实现和维持脊髓灰质炎病毒的根除。
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Pub Date : 2015-05-01DOI: 10.1016/j.nhtm.2015.06.001
Robert M. Haws , Anthony D. Krentz , Rachel V. Stankowski , Robert D. Steiner
Bardet–Biedl syndrome (BBS) is a rare, multisystemic, genetic disease and member of a group of disorders called ciliopathies. This syndrome provides a mechanistic model for ciliopathies that may also extend to common disorders with complex inheritance patterns, including diabetes mellitus and obesity. Dysregulation of signaling pathways altering the cellular response to the extracellular environment is primary to the ciliopathies and characteristic of BBS. As BBS-centered translational research moves forward, innovative advances provide opportunities to improve the care of individuals with BBS and other rare diseases as well as common related conditions. This review aims to highlight the current understanding of the mechanisms underlying BBS and opportunities for advancing the care of individuals with rare diseases.
Focal points
•
Bedside: understanding the multi-dimensional manifestations of ciliopathies, specifically Bardet–Biedl Syndrome (BBS) as a model ciliopathy, will accelerate research into therapeutic targets for ciliopathies, allowing for improved therapies for individuals with these debilitating disorders.
•
Benchside: elucidating the molecular mechanisms of BBS is likely to increase the chance of discovering novel therapeutic approaches that may be generalizable to other ciliopathies and perhaps to common related disorders, such as obesity and diabetes mellitus.
•
Industry: application of known drugs to new indications, or drug repositioning, and development of novel therapeutics, including gene therapies in BBS, may open new avenues for therapeutic discovery and development.
•
Community: rare diseases affect millions of individuals throughout the world with significant impact on quality of life and longevity. The development of multidisciplinary clinics for BBS and effective implementation of a rare disease registry provides a model for advancing the care of individuals with rare diseases.
•
Government and Regulatory Agencies: the importance of rare disease research and the impact of that research on common disorders should be supported with adequate funding and resources. Understanding the molecular pathways underlying ciliopathies, such as BBS, and advancement of translational medicine in ciliopathies will have far reaching societal benefits
{"title":"Bardet–Biedl syndrome: A model for translational research in rare diseases","authors":"Robert M. Haws , Anthony D. Krentz , Rachel V. Stankowski , Robert D. Steiner","doi":"10.1016/j.nhtm.2015.06.001","DOIUrl":"10.1016/j.nhtm.2015.06.001","url":null,"abstract":"<div><p>Bardet–Biedl syndrome (BBS) is a rare, multisystemic, genetic disease and member of a group of disorders called ciliopathies. This syndrome provides a mechanistic model for ciliopathies that may also extend to common disorders with complex inheritance patterns, including diabetes mellitus and obesity. Dysregulation of signaling pathways altering the cellular response to the extracellular environment is primary to the ciliopathies and characteristic of BBS. As BBS-centered translational research moves forward, innovative advances provide opportunities to improve the care of individuals with BBS and other rare diseases as well as common related conditions. This review aims to highlight the current understanding of the mechanisms underlying BBS and opportunities for advancing the care of individuals with rare diseases.</p></div><div><h3>Focal points</h3><p></p><ul><li><span>•</span><span><p><em>Bedside</em>: understanding the multi-dimensional manifestations of ciliopathies, specifically Bardet–Biedl Syndrome (BBS) as a model ciliopathy, will accelerate research into therapeutic targets for ciliopathies, allowing for improved therapies for individuals with these debilitating disorders.</p></span></li><li><span>•</span><span><p><em>Benchside:</em> elucidating the molecular mechanisms of BBS is likely to increase the chance of discovering novel therapeutic approaches that may be generalizable to other ciliopathies and perhaps to common related disorders, such as obesity and diabetes mellitus.</p></span></li><li><span>•</span><span><p><em>Industry</em>: application of known drugs to new indications, or drug repositioning, and development of novel therapeutics, including gene therapies in BBS, may open new avenues for therapeutic discovery and development.</p></span></li><li><span>•</span><span><p><em>Community</em>: rare diseases affect millions of individuals throughout the world with significant impact on quality of life and longevity. The development of multidisciplinary clinics for BBS and effective implementation of a rare disease registry provides a model for advancing the care of individuals with rare diseases.</p></span></li><li><span>•</span><span><p><em>Government and Regulatory Agencies</em>: the importance of rare disease research and the impact of that research on common disorders should be supported with adequate funding and resources. Understanding the molecular pathways underlying ciliopathies, such as BBS, and advancement of translational medicine in ciliopathies will have far reaching societal benefits</p></span></li></ul></div>","PeriodicalId":90660,"journal":{"name":"New horizons in translational medicine","volume":"2 4","pages":"Pages 102-109"},"PeriodicalIF":0.0,"publicationDate":"2015-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.nhtm.2015.06.001","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84108961","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-05-01DOI: 10.1016/j.nhtm.2015.07.070
Keith A, Campagnola S, Peersen O.
Picornaviruses cause a wide range of ailments, including myocarditis, poliomyelitis, and vesicular lesion type diseases. Excellent vaccines exist for several of them, and the development of the live-attenuated oral polio vaccine (OPV) provided an efficient and cost-effective avenue for successful poliovirus eradication in the majority of the world. However, one hurdle for developing successful live-attenuated vaccines lies with the viral RNA-dependent-RNA-polymerase (RdRP) enzyme whose low replication fidelity allows for reversion of attenuated viruses to disease causing variants. Improving the replication fidelity of RdRPs is an attractive avenue for virus attenuation because it may curtail such reversion issues. We have previously solved the crystal structures of several picornaviral polymerase-RNA complexes that show the structural changes taking place within these polymerases during active site closure and catalysis (Gong et al., 2010, 2013). Based on this, we engineered a panel of fidelity variant coxsackievirus B3 polymerases that caused reduced infectivity and attenuated virus growth in mice (Gnädig et al., PNAS, 2012). We hypothesize that such modulation of polymerase fidelity via structure based protein engineering can provide an effective platform to improve the design of live-attenuated vaccines. To investigate this further we have generated over a dozen mutations in the poliovirus Sabin 2 strain polymerase and carried out in vitro biochemical assays to show that these can either increase or decrease polymerase fidelity while having minor effects on elongation rates and processivity. The fidelity modulation can arise from single point mutations, multi-site mutations that replace entire groups of interacting residues, or from grafting in structurally homologous sequences from related polymerases. The data suggests mutations in the palm domain of the poliovirus RdRP can serve as efficient fidelity modulation sites for protein engineering purposes, and we are now seeking to test these variant polymerases in an infectious virus context.
小核糖核酸病毒引起广泛的疾病,包括心肌炎、脊髓灰质炎和水疱病变型疾病。其中有几种疫苗是优良的,口服脊髓灰质炎减毒活疫苗(OPV)的开发为世界上大多数国家成功根除脊髓灰质炎病毒提供了一种有效和具有成本效益的途径。然而,开发成功减毒活疫苗的一个障碍在于病毒rna依赖性rna聚合酶(RdRP)酶,其低复制保真度允许将减毒病毒逆转为引起疾病的变体。提高RdRPs的复制保真度是病毒衰减的一个有吸引力的途径,因为它可以减少这种逆转问题。我们之前已经解决了几种小核糖核酸病毒聚合酶- rna复合物的晶体结构,显示了这些聚合酶在活性位点关闭和催化过程中发生的结构变化(Gong et al., 2010, 2013)。基于此,我们设计了一组保真度变异柯萨奇病毒B3聚合酶,可降低小鼠的传染性和病毒生长(Gnädig等人,PNAS, 2012)。我们假设,通过基于结构的蛋白质工程对聚合酶保真度的调节可以为改进减毒活疫苗的设计提供有效的平台。为了进一步研究这一点,我们在脊髓灰质炎病毒Sabin 2株聚合酶中产生了十多个突变,并进行了体外生化分析,表明这些突变可以增加或降低聚合酶的保真度,而对延伸率和加工率的影响很小。保真度调节可以由单点突变、取代整个相互作用残基群的多位点突变或相关聚合酶在结构上同源序列的嫁接引起。这些数据表明,脊髓灰质炎病毒RdRP掌区突变可以作为蛋白质工程目的的有效保真度调节位点,我们现在正在寻求在感染性病毒背景下测试这些变异聚合酶。
{"title":"Structure-based Engineering of Sabin 2 Poliovirus Polymerase to Alter Replication Fidelity","authors":"Keith A, Campagnola S, Peersen O.","doi":"10.1016/j.nhtm.2015.07.070","DOIUrl":"10.1016/j.nhtm.2015.07.070","url":null,"abstract":"<div><p><span><span><span><span>Picornaviruses<span><span><span> cause a wide range of ailments, including </span>myocarditis, poliomyelitis, and </span>vesicular lesion type diseases. Excellent vaccines exist for several of them, and the development of the live-attenuated </span></span>oral polio vaccine (OPV) provided an efficient and cost-effective avenue for successful </span>poliovirus<span> eradication in the majority of the world. However, one hurdle for developing successful live-attenuated vaccines lies with the viral RNA-dependent-RNA-polymerase (RdRP) enzyme whose low replication fidelity allows for reversion of attenuated viruses<span> to disease causing variants. Improving the replication fidelity of RdRPs is an attractive avenue for virus attenuation because it may curtail such reversion issues. We have previously solved the crystal structures of several picornaviral polymerase-RNA complexes that show the structural changes taking place within these polymerases during active site closure and catalysis (Gong et al., 2010, 2013). Based on this, we engineered a panel of fidelity variant </span></span></span>coxsackievirus B3 polymerases that caused reduced infectivity and attenuated virus growth in mice (Gnädig et al., PNAS, 2012). We hypothesize that such modulation of polymerase fidelity via structure based protein engineering can provide an effective platform to improve the design of live-attenuated vaccines. To investigate this further we have generated over a dozen mutations in the poliovirus Sabin 2 strain polymerase and carried out </span><em>in vitro</em><span><span> biochemical assays to show that these can either increase or decrease polymerase fidelity while having minor effects on elongation rates and processivity. The fidelity modulation can arise from single point mutations, multi-site mutations that replace entire groups of interacting residues, or from grafting in structurally homologous sequences from related polymerases. The data suggests mutations in the palm domain of the poliovirus RdRP can serve as efficient fidelity modulation sites for protein engineering purposes, and we are now seeking to test these variant polymerases in an </span>infectious virus context.</span></p></div>","PeriodicalId":90660,"journal":{"name":"New horizons in translational medicine","volume":"2 4","pages":"Page 134"},"PeriodicalIF":0.0,"publicationDate":"2015-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.nhtm.2015.07.070","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84507351","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-05-01DOI: 10.1016/j.nhtm.2015.07.054
Laura Pulscher , Erin McNulty , Amy V. Nalls , Craig Ramsey , Candace K. Mathiason
Approximately 150 million people and almost $40 billion worth of agricultural commodities go through U.S. international ports annually. Ports seize animal and plant products potentially contaminated with high risk diseases that then must be decontaminated before entering the waste stream. Currently, there are only 3 methods of decontamination accepted by the Animal Plant and Health Inspection Service at U.S. ports and borders including incineration, high temperature cooking, and discharge of ground waste as sewage. In this study we assess the efficacy of a relatively new decontamination technology, alkaline digestion, to mitigate infectious agents. Transmissible Spongiform Encephalopathies (TSEs), a member of the protein misfolding diseases (ex: Alzheimer’s and Parkinson’s Diseases), were chosen as the infectious agent for this study because they rank as the hardest to kill microbe/pathogen, affect both human and animal species worldwide and are shed by infected hosts into the environment establishing highly infectious biota. Chronic wasting disease (CWD), an emerging TSE of cervid species (deer, elk, moose) in North America, has recently been spotlighted as a potential concern for European countries, and recapitulates human and animal TSE pathogenesis and shedding. For these reasons CWD is ideal for mitigation studies. We processed CWD positive and negative materials by alkaline digestion under standard temperature and pressure at time intervals of 2, 4, and 6h. Samples were retrieved after digestion, were neutralized and inoculated intracerebrally into transgenic mice expressing the cervid protein to determine remaining prion infectivity. In addition, the samples (pre and post alkaline digestion) were tested for amplification competent prions by Protein Misfolding Cyclic Amplification (PMCA). Preliminary results suggest a lack of amplification competent prions in samples processed by alkaline digestion at 2, 4, and 6 h cycles as compared to nondigested samples. This work will provide a basis for future studies designed to unravel the mechanisms associated with the ability of prions to bind surfaces enhancing prion mitigation strategies for TSEs and by extension, other protein misfolding diseases.
{"title":"Sterilization and Disposal of Agricultural Quarantine Waste","authors":"Laura Pulscher , Erin McNulty , Amy V. Nalls , Craig Ramsey , Candace K. Mathiason","doi":"10.1016/j.nhtm.2015.07.054","DOIUrl":"10.1016/j.nhtm.2015.07.054","url":null,"abstract":"<div><p><span><span>Approximately 150 million people and almost $40 billion worth of agricultural commodities go through U.S. international ports annually. Ports seize animal and plant products potentially contaminated with high risk diseases that then must be decontaminated before entering the waste stream. Currently, there are only 3 methods of decontamination accepted by the Animal Plant and Health Inspection Service at U.S. ports and borders including incineration, high temperature cooking, and discharge of ground waste as sewage. In this study we assess the efficacy of a relatively new decontamination technology, alkaline digestion, to mitigate infectious agents. Transmissible Spongiform Encephalopathies (TSEs), a member of the </span>protein misfolding<span> diseases (ex: Alzheimer’s and Parkinson’s Diseases), were chosen as the infectious agent for this study because they rank as the hardest to kill microbe/pathogen, affect both human and animal species worldwide and are shed by infected hosts into the environment establishing highly infectious biota. Chronic wasting disease (CWD), an emerging TSE of cervid species (deer, elk, moose) in North America, has recently been spotlighted as a potential concern for European countries, and recapitulates human and animal TSE pathogenesis and shedding. For these reasons CWD is ideal for mitigation studies. We processed CWD positive and negative materials by alkaline digestion under standard temperature and pressure at time intervals of 2, 4, and 6</span></span> <span><span>h. Samples were retrieved after digestion, were neutralized and inoculated intracerebrally into transgenic mice expressing the cervid protein to determine remaining prion infectivity. In addition, the samples (pre and post alkaline digestion) were tested for amplification competent prions by </span>Protein Misfolding Cyclic Amplification (PMCA). Preliminary results suggest a lack of amplification competent prions in samples processed by alkaline digestion at 2, 4, and 6</span> <!-->h cycles as compared to nondigested samples. This work will provide a basis for future studies designed to unravel the mechanisms associated with the ability of prions to bind surfaces enhancing prion mitigation strategies for TSEs and by extension, other protein misfolding diseases.</p></div>","PeriodicalId":90660,"journal":{"name":"New horizons in translational medicine","volume":"2 4","pages":"Page 130"},"PeriodicalIF":0.0,"publicationDate":"2015-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.nhtm.2015.07.054","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"85985173","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-03-01DOI: 10.1016/j.nhtm.2014.12.002
Randall J. Cohrs, Tyler Martin, Parviz Ghahramani, Luc Bidaut, Paul J. Higgins, Aamir Shahzad
Progress in the field of translational medicine (TM) within the last decade attests to the importance of the TM initiative in the context of more traditional academic health science centers. In many instances, these advancements have taken place without a clear definition of TM, which signifies the urgent need for a clear, consensus definition that would serve as an integrative blueprint for the various “versions” of TM definition. The various existing definitions are reflecting the diversity of institutional translational research and deployment programs. The European Society for Translational Medicine (EUSTM) is a global non-profit and neutral society whose principal objective is to enhance world-wide healthcare through the specific development and eventual clinical implementation and exploitation of TM-based approaches, resources and expertise. In this position article, the EUSTM defines TM as an interdisciplinary branch of the biomedical field supported by three main pillars: benchside, bedside and community. The goal of TM is to combine disciplines, resources, expertise, and techniques within these pillars to promote enhancements in prevention, diagnosis, and therapies. Accordingly, TM is a highly interdisciplinary field, the primary goal of which is to coalesce assets of various natures within the individual pillars in order to improve the global healthcare system significantly.
{"title":"Translational Medicine definition by the European Society for Translational Medicine","authors":"Randall J. Cohrs, Tyler Martin, Parviz Ghahramani, Luc Bidaut, Paul J. Higgins, Aamir Shahzad","doi":"10.1016/j.nhtm.2014.12.002","DOIUrl":"https://doi.org/10.1016/j.nhtm.2014.12.002","url":null,"abstract":"<div><p>Progress in the field of translational medicine (TM) within the last decade attests to the importance of the TM initiative in the context of more traditional academic health science centers. In many instances, these advancements have taken place without a clear definition of TM, which signifies the urgent need for a clear, consensus definition that would serve as an integrative blueprint for the various “versions” of TM definition. The various existing definitions are reflecting the diversity of institutional translational research and deployment programs. The European Society for Translational Medicine (EUSTM) is a global non-profit and neutral society whose principal objective is to enhance world-wide healthcare through the specific development and eventual clinical implementation and exploitation of TM-based approaches, resources and expertise. In this position article, the EUSTM defines TM as an <em>interdisciplinary branch of the biomedical field supported by three main pillars</em>: <em>benchside</em>, <em>bedside and community. The goal of TM is to combine disciplines, resources</em>, <em>expertise</em>, <em>and techniques within these pillars to promote enhancements in prevention</em>, <em>diagnosis</em>, <em>and therapies</em>. Accordingly, TM is a highly interdisciplinary field, the primary goal of which is to coalesce assets of various natures within the individual pillars in order to improve the global healthcare system significantly.</p></div>","PeriodicalId":90660,"journal":{"name":"New horizons in translational medicine","volume":"2 3","pages":"Pages 86-88"},"PeriodicalIF":0.0,"publicationDate":"2015-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.nhtm.2014.12.002","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"91753848","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}