首页 > 最新文献

Breast Cancer Research : BCR最新文献

英文 中文
Serum immuno-oncology markers carry independent prognostic information in patients with newly diagnosed metastatic breast cancer, from a prospective observational study. 一项前瞻性观察研究表明,血清免疫肿瘤学标志物在新诊断的转移性乳腺癌患者中携带独立的预后信息。
Pub Date : 2023-03-21 DOI: 10.1186/s13058-023-01631-6
Frida Björk Gunnarsdottir, Pär-Ola Bendahl, Alexandra Johansson, Rui Benfeitas, Lisa Rydén, Caroline Bergenfelz, Anna-Maria Larsson

Background: Metastatic breast cancer (MBC) is a challenging disease, and despite new therapies, prognosis is still poor for a majority of patients. There is a clinical need for improved prognostication where immuno-oncology markers can provide important information. The aim of this study was to evaluate serum immuno-oncology markers in MBC patients and their respective relevance for prediction of survival.

Patients and methods: We investigated a broad panel of 92 immuno-oncology proteins in serum from 136 MBC patients included in a prospective observational study (NCT01322893) with long-term follow-up. Serum samples were collected before start of systemic therapy and analyzed using multiplex proximity extension assay (Olink Target 96 Immuno-Oncology panel). Multiple machine learning techniques were used to identify serum markers with highest importance for prediction of overall and progression-free survival (OS and PFS), and associations to survival were further evaluated using Cox regression analyses. False discovery rate was then used to adjust for multiple comparisons.

Results: Using random forest and random survival forest analyses, we identified the top nine and ten variables of highest predictive importance for OS and PFS, respectively. Cox regression analyses revealed significant associations (P < 0.005) of higher serum levels of IL-8, IL-10 and CAIX with worse OS in multivariable analyses, adjusted for established clinical prognostic factors including circulating tumor cells (CTCs). Similarly, high serum levels of IL-8, IL-10, ADA and CASP8 significantly associated with worse PFS. Interestingly, high serum levels of FasL significantly associated with improved OS and PFS. In addition, CSF-1, IL-6, MUC16, TFNSFR4 and CD244 showed suggestive evidence (P < 0.05) for an association to survival in multivariable analyses. After correction for multiple comparisons, IL-8 still showed strong evidence for correlation to survival.

Conclusion: To conclude, we found six serum immuno-oncology markers that were significantly associated with OS and/or PFS in MBC patients, independently of other established prognostic factors including CTCs. Furthermore, an additional five serum immuno-oncology markers provided suggestive evidence for an independent association to survival. These findings highlight the relevance of immuno-oncology serum markers in MBC patients and support their usefulness for improved prognostication. Trial registration Clinical Trials (NCT01322893), registered March 25, 2011.

背景:转移性乳腺癌(MBC)是一种具有挑战性的疾病,尽管有新的治疗方法,但大多数患者的预后仍然很差。临床需要改进预后,其中免疫肿瘤学标志物可以提供重要信息。本研究的目的是评估MBC患者的血清免疫肿瘤标志物及其各自与预测生存的相关性。患者和方法:我们研究了一项长期随访的前瞻性观察性研究(NCT01322893)中136名MBC患者血清中的92种免疫肿瘤蛋白。在开始全身治疗前收集血清样本,并使用多重接近扩展试验(Olink Target 96免疫肿瘤学小组)进行分析。使用多种机器学习技术来识别对预测总生存和无进展生存(OS和PFS)最重要的血清标志物,并使用Cox回归分析进一步评估与生存的关联。然后使用错误发现率来调整多重比较。结果:使用随机森林和随机生存森林分析,我们分别确定了对OS和PFS预测重要性最高的前9个和10个变量。结论:总之,我们发现6种血清免疫肿瘤学标志物与MBC患者的OS和/或PFS显著相关,独立于其他已确定的预后因素,包括ctc。此外,另外五种血清免疫肿瘤学标志物为与生存的独立关联提供了暗示性证据。这些发现强调了免疫肿瘤学血清标志物在MBC患者中的相关性,并支持它们对改善预后的有用性。临床试验(NCT01322893),注册于2011年3月25日。
{"title":"Serum immuno-oncology markers carry independent prognostic information in patients with newly diagnosed metastatic breast cancer, from a prospective observational study.","authors":"Frida Björk Gunnarsdottir,&nbsp;Pär-Ola Bendahl,&nbsp;Alexandra Johansson,&nbsp;Rui Benfeitas,&nbsp;Lisa Rydén,&nbsp;Caroline Bergenfelz,&nbsp;Anna-Maria Larsson","doi":"10.1186/s13058-023-01631-6","DOIUrl":"https://doi.org/10.1186/s13058-023-01631-6","url":null,"abstract":"<p><strong>Background: </strong>Metastatic breast cancer (MBC) is a challenging disease, and despite new therapies, prognosis is still poor for a majority of patients. There is a clinical need for improved prognostication where immuno-oncology markers can provide important information. The aim of this study was to evaluate serum immuno-oncology markers in MBC patients and their respective relevance for prediction of survival.</p><p><strong>Patients and methods: </strong>We investigated a broad panel of 92 immuno-oncology proteins in serum from 136 MBC patients included in a prospective observational study (NCT01322893) with long-term follow-up. Serum samples were collected before start of systemic therapy and analyzed using multiplex proximity extension assay (Olink Target 96 Immuno-Oncology panel). Multiple machine learning techniques were used to identify serum markers with highest importance for prediction of overall and progression-free survival (OS and PFS), and associations to survival were further evaluated using Cox regression analyses. False discovery rate was then used to adjust for multiple comparisons.</p><p><strong>Results: </strong>Using random forest and random survival forest analyses, we identified the top nine and ten variables of highest predictive importance for OS and PFS, respectively. Cox regression analyses revealed significant associations (P < 0.005) of higher serum levels of IL-8, IL-10 and CAIX with worse OS in multivariable analyses, adjusted for established clinical prognostic factors including circulating tumor cells (CTCs). Similarly, high serum levels of IL-8, IL-10, ADA and CASP8 significantly associated with worse PFS. Interestingly, high serum levels of FasL significantly associated with improved OS and PFS. In addition, CSF-1, IL-6, MUC16, TFNSFR4 and CD244 showed suggestive evidence (P < 0.05) for an association to survival in multivariable analyses. After correction for multiple comparisons, IL-8 still showed strong evidence for correlation to survival.</p><p><strong>Conclusion: </strong>To conclude, we found six serum immuno-oncology markers that were significantly associated with OS and/or PFS in MBC patients, independently of other established prognostic factors including CTCs. Furthermore, an additional five serum immuno-oncology markers provided suggestive evidence for an independent association to survival. These findings highlight the relevance of immuno-oncology serum markers in MBC patients and support their usefulness for improved prognostication. Trial registration Clinical Trials (NCT01322893), registered March 25, 2011.</p>","PeriodicalId":9283,"journal":{"name":"Breast Cancer Research : BCR","volume":"25 1","pages":"29"},"PeriodicalIF":0.0,"publicationDate":"2023-03-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10031935/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9252490","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Correction: Expression of hormone receptors is associated with specific immunological profiles of the breast cancer microenvironment. 更正:激素受体的表达与乳腺癌微环境的特定免疫特征有关。
Pub Date : 2023-03-20 DOI: 10.1186/s13058-023-01637-0
Toru Hanamura, Shigehisa Kitano, Hiroshi Kagamu, Makiko Yamashita, Mayako Terao, Takuho Okamura, Nobue Kumaki, Katsuto Hozumi, Takayuki Iwamoto, Chikako Honda, Sasagu Kurozumi, Naoki Niikura
{"title":"Correction: Expression of hormone receptors is associated with specific immunological profiles of the breast cancer microenvironment.","authors":"Toru Hanamura,&nbsp;Shigehisa Kitano,&nbsp;Hiroshi Kagamu,&nbsp;Makiko Yamashita,&nbsp;Mayako Terao,&nbsp;Takuho Okamura,&nbsp;Nobue Kumaki,&nbsp;Katsuto Hozumi,&nbsp;Takayuki Iwamoto,&nbsp;Chikako Honda,&nbsp;Sasagu Kurozumi,&nbsp;Naoki Niikura","doi":"10.1186/s13058-023-01637-0","DOIUrl":"https://doi.org/10.1186/s13058-023-01637-0","url":null,"abstract":"","PeriodicalId":9283,"journal":{"name":"Breast Cancer Research : BCR","volume":"25 1","pages":"28"},"PeriodicalIF":0.0,"publicationDate":"2023-03-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10026395/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9154402","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A positive feedback loop driven by fibronectin and IL-1β sustains the inflammatory microenvironment in breast cancer. 由纤维连接蛋白和IL-1β驱动的正反馈回路维持乳腺癌的炎症微环境。
Pub Date : 2023-03-15 DOI: 10.1186/s13058-023-01629-0
Gurcan Tunali, Hamdullah Yanik, Suleyman Can Ozturk, Secil Demirkol-Canli, Georgios Efthymiou, Kerim Bora Yilmaz, Ellen Van Obberghen-Schilling, Gunes Esendagli

Inflammatory alterations of the extracellular matrix shape the tumor microenvironment and promote all stages of carcinogenesis. This study aims to determine the impact of cellular fibronectin on inflammatory facets of tumor-associated macrophages (TAMs) in breast cancer. Cellular fibronectin (FN) harboring the alternatively spliced extra domain A (FN-EDA) was determined to be a matrix component produced by the triple-negative breast cancer (TNBC) cells. High levels of FN-EDA correlated with poor survival in breast cancer patients. The proinflammatory cytokine IL-1β enhanced the expression of cellular fibronectin including FN-EDA. TAMs were frequently observed in the tumor areas rich in FN-EDA. Conditioned media from TNBC cells induced the differentiation of CD206+CD163+ macrophages and stimulated the STAT3 pathway, ex vivo. In the macrophages, the STAT3 pathway enhanced FN-EDA-induced IL-1β secretion and NF-κB signaling. In conclusion, our data indicate a self-reinforcing mechanism sustained by FN-EDA and IL-1β through NF-κB and STAT3 signaling in TAMs which fosters an inflammatory environment in TNBC.

细胞外基质的炎症改变塑造了肿瘤微环境,促进了癌变的各个阶段。本研究旨在确定细胞纤维连接蛋白对乳腺癌肿瘤相关巨噬细胞(tam)炎症方面的影响。细胞纤维连接蛋白(FN)含有选择性剪接的额外结构域A (FN- eda),被确定为三阴性乳腺癌(TNBC)细胞产生的基质成分。高水平的FN-EDA与乳腺癌患者的低生存率相关。促炎细胞因子IL-1β增强了包括FN-EDA在内的细胞纤维连接蛋白的表达。在富含FN-EDA的肿瘤区域经常观察到tam。体外,TNBC细胞条件培养基诱导CD206+CD163+巨噬细胞分化,并刺激STAT3通路。在巨噬细胞中,STAT3通路增强了fn - eda诱导的IL-1β分泌和NF-κB信号传导。总之,我们的数据表明,tnf - eda和IL-1β通过tnf -κB和STAT3信号传导在tam中维持自我强化机制,从而在TNBC中形成炎症环境。
{"title":"A positive feedback loop driven by fibronectin and IL-1β sustains the inflammatory microenvironment in breast cancer.","authors":"Gurcan Tunali,&nbsp;Hamdullah Yanik,&nbsp;Suleyman Can Ozturk,&nbsp;Secil Demirkol-Canli,&nbsp;Georgios Efthymiou,&nbsp;Kerim Bora Yilmaz,&nbsp;Ellen Van Obberghen-Schilling,&nbsp;Gunes Esendagli","doi":"10.1186/s13058-023-01629-0","DOIUrl":"https://doi.org/10.1186/s13058-023-01629-0","url":null,"abstract":"<p><p>Inflammatory alterations of the extracellular matrix shape the tumor microenvironment and promote all stages of carcinogenesis. This study aims to determine the impact of cellular fibronectin on inflammatory facets of tumor-associated macrophages (TAMs) in breast cancer. Cellular fibronectin (FN) harboring the alternatively spliced extra domain A (FN-EDA) was determined to be a matrix component produced by the triple-negative breast cancer (TNBC) cells. High levels of FN-EDA correlated with poor survival in breast cancer patients. The proinflammatory cytokine IL-1β enhanced the expression of cellular fibronectin including FN-EDA. TAMs were frequently observed in the tumor areas rich in FN-EDA. Conditioned media from TNBC cells induced the differentiation of CD206<sup>+</sup>CD163<sup>+</sup> macrophages and stimulated the STAT3 pathway, ex vivo. In the macrophages, the STAT3 pathway enhanced FN-EDA-induced IL-1β secretion and NF-κB signaling. In conclusion, our data indicate a self-reinforcing mechanism sustained by FN-EDA and IL-1β through NF-κB and STAT3 signaling in TAMs which fosters an inflammatory environment in TNBC.</p>","PeriodicalId":9283,"journal":{"name":"Breast Cancer Research : BCR","volume":"25 1","pages":"27"},"PeriodicalIF":0.0,"publicationDate":"2023-03-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10015813/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9313431","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
RET signaling in breast cancer therapeutic resistance and metastasis. RET 信号在乳腺癌抗药性和转移中的作用。
Pub Date : 2023-03-14 DOI: 10.1186/s13058-023-01622-7
Geoffrey Pecar, Simeng Liu, Jagmohan Hooda, Jennifer M Atkinson, Steffi Oesterreich, Adrian V Lee

RET, a single-pass receptor tyrosine kinase encoded on human chromosome 10, is well known to the field of developmental biology for its role in the ontogenesis of the central and enteric nervous systems and the kidney. In adults, RET alterations have been characterized as drivers of non-small cell lung cancer and multiple neuroendocrine neoplasms. In breast cancer, RET signaling networks have been shown to influence diverse functions including tumor development, metastasis, and therapeutic resistance. While RET is known to drive the development and progression of multiple solid tumors, therapeutic agents selectively targeting RET are relatively new, though multiple multi-kinase inhibitors have shown promise as RET inhibitors in the past; further, RET has been historically neglected as a potential therapeutic co-target in endocrine-refractory breast cancers despite mounting evidence for a key pathologic role and repeated description of a bi-directional relationship with the estrogen receptor, the principal driver of most breast tumors. Additionally, the recent discovery of RET enrichment in breast cancer brain metastases suggests a role for RET inhibition specific to advanced disease. This review assesses the status of research on RET in breast cancer and evaluates the therapeutic potential of RET-selective kinase inhibitors across major breast cancer subtypes.

RET 是一种编码在人类第 10 号染色体上的单通道受体酪氨酸激酶,因其在中枢神经系统、肠道神经系统和肾脏的本体发生过程中的作用而为发育生物学领域所熟知。在成人中,RET 改变已被定性为非小细胞肺癌和多种神经内分泌肿瘤的驱动因素。在乳腺癌中,RET 信号网络已被证明会影响多种功能,包括肿瘤发生、转移和耐药性。众所周知,RET 是多种实体瘤发生和发展的驱动因素,但选择性靶向 RET 的治疗药物却相对较新,尽管过去多种多激酶抑制剂已显示出作为 RET 抑制剂的前景;此外,尽管有越来越多的证据表明 RET 在内分泌难治性乳腺癌中起着关键的病理作用,并且反复描述了它与雌激素受体(大多数乳腺癌的主要驱动因素)之间的双向关系,但 RET 作为内分泌难治性乳腺癌的潜在治疗共同靶点却一直被忽视。此外,最近在乳腺癌脑转移灶中发现的 RET 富集现象表明,RET 抑制剂在晚期疾病中发挥着特殊作用。本综述评估了乳腺癌中 RET 的研究现状,并评估了主要乳腺癌亚型中 RET 选择性激酶抑制剂的治疗潜力。
{"title":"RET signaling in breast cancer therapeutic resistance and metastasis.","authors":"Geoffrey Pecar, Simeng Liu, Jagmohan Hooda, Jennifer M Atkinson, Steffi Oesterreich, Adrian V Lee","doi":"10.1186/s13058-023-01622-7","DOIUrl":"10.1186/s13058-023-01622-7","url":null,"abstract":"<p><p>RET, a single-pass receptor tyrosine kinase encoded on human chromosome 10, is well known to the field of developmental biology for its role in the ontogenesis of the central and enteric nervous systems and the kidney. In adults, RET alterations have been characterized as drivers of non-small cell lung cancer and multiple neuroendocrine neoplasms. In breast cancer, RET signaling networks have been shown to influence diverse functions including tumor development, metastasis, and therapeutic resistance. While RET is known to drive the development and progression of multiple solid tumors, therapeutic agents selectively targeting RET are relatively new, though multiple multi-kinase inhibitors have shown promise as RET inhibitors in the past; further, RET has been historically neglected as a potential therapeutic co-target in endocrine-refractory breast cancers despite mounting evidence for a key pathologic role and repeated description of a bi-directional relationship with the estrogen receptor, the principal driver of most breast tumors. Additionally, the recent discovery of RET enrichment in breast cancer brain metastases suggests a role for RET inhibition specific to advanced disease. This review assesses the status of research on RET in breast cancer and evaluates the therapeutic potential of RET-selective kinase inhibitors across major breast cancer subtypes.</p>","PeriodicalId":9283,"journal":{"name":"Breast Cancer Research : BCR","volume":"25 1","pages":"26"},"PeriodicalIF":0.0,"publicationDate":"2023-03-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10015789/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9129153","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
MUC16 promotes triple-negative breast cancer lung metastasis by modulating RNA-binding protein ELAVL1/HUR. MUC16通过调节RNA结合蛋白ELAVL1/HUR促进三阴性乳腺癌肺转移
Pub Date : 2023-03-14 DOI: 10.1186/s13058-023-01630-7
Sanjib Chaudhary, Muthamil Iniyan Appadurai, Shailendra Kumar Maurya, Palanisamy Nallasamy, Saravanakumar Marimuthu, Ashu Shah, Pranita Atri, Chirravuri Venkata Ramakanth, Subodh M Lele, Parthasarathy Seshacharyulu, Moorthy P Ponnusamy, Mohd W Nasser, Apar Kishor Ganti, Surinder K Batra, Imayavaramban Lakshmanan

Background: Triple-negative breast cancer (TNBC) is highly aggressive with an increased metastatic incidence compared to other breast cancer subtypes. However, due to the absence of clinically reliable biomarkers and targeted therapy in TNBC, outcomes are suboptimal. Hence, there is an urgent need to understand biological mechanisms that lead to identifying novel therapeutic targets for managing metastatic TNBC.

Methods: The clinical significance of MUC16 and ELAVL1 or Hu antigen R (HuR) was examined using breast cancer TCGA data. Microarray was performed on MUC16 knockdown and scramble TNBC cells and MUC16-associated genes were identified using RNA immunoprecipitation and metastatic cDNA array. Metastatic properties of MUC16 were evaluated using tail vein experiment. MUC16 and HuR downstream pathways were confirmed by ectopic overexpression of MUC16-carboxyl-terminal (MUC16-Cter), HuR and cMyc as well as HuR inhibitors (MS-444 and CMLD-2) in TNBC cells.

Results: MUC16 was highly expressed in TNBC and correlated with its target HuR. Depletion of MUC16 showed decreased invasion, migration, and colony formation abilities of human and mouse TNBC cells. Mice injected with MUC16 depleted cells were less likely to develop lung metastasis (P = 0.001). Notably, MUC16 and HuR were highly expressed in the lung tropic TNBC cells and lung metastases. Mechanistically, we identified cMyc as a HuR target in TNBC using RNA immunoprecipitation and metastatic cDNA array. Furthermore, MUC16 knockdown and pharmacological inhibition of HuR (MS-444 and CMLD-2) in TNBC cells showed a reduction in cMyc expression. MUC16-Cter or HuR overexpression models indicated MUC16/HuR/cMyc axis in TNBC cell migration.

Conclusions: Our study identified MUC16 as a TNBC lung metastasis promoter that acts through HuR/cMyc axis. This study will form the basis of future studies to evaluate the targeting of both MUC16 and HuR in TNBC patients.

背景:三阴性乳腺癌(TNBC三阴性乳腺癌(TNBC)具有高度侵袭性,与其他乳腺癌亚型相比,其转移发生率更高。然而,由于缺乏临床可靠的生物标志物和靶向治疗,TNBC 的治疗效果并不理想。因此,迫切需要了解其生物机制,从而确定治疗转移性 TNBC 的新靶点:方法:利用乳腺癌 TCGA 数据研究了 MUC16 和 ELAVL1 或 Hu 抗原 R(HuR)的临床意义。对MUC16敲除和混杂的TNBC细胞进行了微阵列分析,并利用RNA免疫沉淀和转移性cDNA阵列鉴定了MUC16相关基因。通过尾静脉实验评估了MUC16的转移特性。通过在TNBC细胞中异位过表达MUC16-羧基末端(MUC16-Cter)、HuR和cMyc以及HuR抑制剂(MS-444和CMLD-2),证实了MUC16和HuR的下游通路:结果:MUC16在TNBC中高表达,并与其靶标HuR相关。删除 MUC16 会降低人和小鼠 TNBC 细胞的侵袭、迁移和集落形成能力。注射了去除了 MUC16 的细胞的小鼠发生肺转移的可能性较低(P = 0.001)。值得注意的是,MUC16和HuR在肺滋养型TNBC细胞和肺转移灶中高表达。从机理上讲,我们利用 RNA 免疫沉淀和转移 cDNA 阵列确定了 cMyc 是 TNBC 中 HuR 的靶点。此外,在 TNBC 细胞中敲除 MUC16 和药理抑制 HuR(MS-444 和 CMLD-2)可减少 cMyc 的表达。MUC16-Cter或HuR过表达模型表明MUC16/HuR/cMyc轴在TNBC细胞迁移中的作用:我们的研究确定了MUC16是通过HuR/cMyc轴发挥作用的TNBC肺转移启动子。这项研究将为今后评估MUC16和HuR在TNBC患者中的靶向作用奠定基础。
{"title":"MUC16 promotes triple-negative breast cancer lung metastasis by modulating RNA-binding protein ELAVL1/HUR.","authors":"Sanjib Chaudhary, Muthamil Iniyan Appadurai, Shailendra Kumar Maurya, Palanisamy Nallasamy, Saravanakumar Marimuthu, Ashu Shah, Pranita Atri, Chirravuri Venkata Ramakanth, Subodh M Lele, Parthasarathy Seshacharyulu, Moorthy P Ponnusamy, Mohd W Nasser, Apar Kishor Ganti, Surinder K Batra, Imayavaramban Lakshmanan","doi":"10.1186/s13058-023-01630-7","DOIUrl":"10.1186/s13058-023-01630-7","url":null,"abstract":"<p><strong>Background: </strong>Triple-negative breast cancer (TNBC) is highly aggressive with an increased metastatic incidence compared to other breast cancer subtypes. However, due to the absence of clinically reliable biomarkers and targeted therapy in TNBC, outcomes are suboptimal. Hence, there is an urgent need to understand biological mechanisms that lead to identifying novel therapeutic targets for managing metastatic TNBC.</p><p><strong>Methods: </strong>The clinical significance of MUC16 and ELAVL1 or Hu antigen R (HuR) was examined using breast cancer TCGA data. Microarray was performed on MUC16 knockdown and scramble TNBC cells and MUC16-associated genes were identified using RNA immunoprecipitation and metastatic cDNA array. Metastatic properties of MUC16 were evaluated using tail vein experiment. MUC16 and HuR downstream pathways were confirmed by ectopic overexpression of MUC16-carboxyl-terminal (MUC16-Cter), HuR and cMyc as well as HuR inhibitors (MS-444 and CMLD-2) in TNBC cells.</p><p><strong>Results: </strong>MUC16 was highly expressed in TNBC and correlated with its target HuR. Depletion of MUC16 showed decreased invasion, migration, and colony formation abilities of human and mouse TNBC cells. Mice injected with MUC16 depleted cells were less likely to develop lung metastasis (P = 0.001). Notably, MUC16 and HuR were highly expressed in the lung tropic TNBC cells and lung metastases. Mechanistically, we identified cMyc as a HuR target in TNBC using RNA immunoprecipitation and metastatic cDNA array. Furthermore, MUC16 knockdown and pharmacological inhibition of HuR (MS-444 and CMLD-2) in TNBC cells showed a reduction in cMyc expression. MUC16-Cter or HuR overexpression models indicated MUC16/HuR/cMyc axis in TNBC cell migration.</p><p><strong>Conclusions: </strong>Our study identified MUC16 as a TNBC lung metastasis promoter that acts through HuR/cMyc axis. This study will form the basis of future studies to evaluate the targeting of both MUC16 and HuR in TNBC patients.</p>","PeriodicalId":9283,"journal":{"name":"Breast Cancer Research : BCR","volume":"25 1","pages":"25"},"PeriodicalIF":0.0,"publicationDate":"2023-03-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10012760/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9227869","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prolactin levels and breast cancer risk by tumor expression of prolactin-related markers. 肿瘤中催乳素相关标志物的表达与催乳素水平及乳腺癌风险的关系。
Pub Date : 2023-03-07 DOI: 10.1186/s13058-023-01618-3
Cassandra A Hathaway, Megan S Rice, Laura C Collins, Dilys Chen, David A Frank, Sarah Walker, Charles V Clevenger, Rulla M Tamimi, Shelley S Tworoger, Susan E Hankinson

Background: Higher circulating prolactin has been associated with increased breast cancer risk. Prolactin binding to the prolactin receptor (PRLR) can activate the transcription factor STAT5, thus, we examined the association between plasma prolactin and breast cancer risk by tumor expression of PRLR, STAT5, and the upstream kinase JAK2.

Methods: Using data from 745 cases and 2454 matched controls in the Nurses' Health Study, we conducted polytomous logistic regression to examine the association between prolactin (> 11 ng/mL vs. ≤ 11 ng/mL) measured within 10 years of diagnosis and breast cancer risk by PRLR (nuclear [N], cytoplasmic [C]), phosphorylated STAT5 (pSTAT5; N, C), and phosphorylated JAK2 (pJAK2; C) tumor expression. Analyses were conducted separately in premenopausal (n = 168 cases, 765 controls) and postmenopausal women (n = 577 cases, 1689 controls).

Results: In premenopausal women, prolactin levels > 11 ng/mL were positively associated with risk of tumors positive for pSTAT5-N (OR 2.30, 95% CI 1.02-5.22) and pSTAT5-C (OR 1.64, 95% CI 1.01-2.65), but not tumors that were negative for these markers (OR 0.98, 95% CI 0.65-1.46 and OR 0.73, 95% CI 0.43-1.25; p-heterogeneity = 0.06 and 0.02, respectively). This was stronger when tumors were positive for both pSTAT5-N and pSTAT5-C (OR 2.88, 95% CI 1.14-7.25). No association was observed for PRLR or pJAK2 (positive or negative) and breast cancer risk among premenopausal women. Among postmenopausal women, plasma prolactin levels were positively associated with breast cancer risk irrespective of PRLR, pSTAT5, or pJAK2 expression (all p-heterogeneity ≥ 0.21).

Conclusion: We did not observe clear differences in the association between plasma prolactin and breast cancer risk by tumor expression of PRLR or pJAK2, although associations for premenopausal women were observed for pSTAT5 positive tumors only. While additional studies are needed, this suggests that prolactin may act on human breast tumor development through alternative pathways.

背景:高循环催乳素与乳腺癌风险增加有关。催乳素结合催乳素受体(Prolactin receptor, PRLR)可以激活转录因子STAT5,因此,我们通过肿瘤中PRLR、STAT5和上游激酶JAK2的表达来研究血浆催乳素与乳腺癌风险之间的关系。方法:利用护士健康研究中745例患者和2454例匹配对照者的数据,采用多元逻辑回归方法,通过PRLR(核[N]、细胞质[C])、磷酸化STAT5 (pSTAT5;N, C)和磷酸化JAK2 (pJAK2;C)肿瘤表达。分别对绝经前妇女(n = 168例,765例对照)和绝经后妇女(n = 577例,1689例对照)进行分析。结果:在绝经前妇女中,催乳素水平bbb11 ng/mL与pSTAT5-N (OR 2.30, 95% CI 1.02-5.22)和pSTAT5-C (OR 1.64, 95% CI 1.01-2.65)阳性肿瘤的风险呈正相关,但与这些标志物阴性肿瘤的风险无关(OR 0.98, 95% CI 0.65-1.46和OR 0.73, 95% CI 0.43-1.25;p异质性分别为0.06和0.02)。当肿瘤中pSTAT5-N和pSTAT5-C均呈阳性时,这种情况更为明显(OR 2.88, 95% CI 1.14-7.25)。在绝经前妇女中,未观察到PRLR或pJAK2(阳性或阴性)与乳腺癌风险相关。在绝经后妇女中,血浆催乳素水平与乳腺癌风险呈正相关,与PRLR、pSTAT5或pJAK2表达无关(所有p异质性均≥0.21)。结论:我们没有观察到血浆泌乳素与乳腺癌风险之间通过肿瘤表达PRLR或pJAK2的明显差异,尽管绝经前妇女仅在pSTAT5阳性肿瘤中观察到相关。虽然还需要进一步的研究,但这表明催乳素可能通过其他途径对人类乳腺肿瘤的发展起作用。
{"title":"Prolactin levels and breast cancer risk by tumor expression of prolactin-related markers.","authors":"Cassandra A Hathaway, Megan S Rice, Laura C Collins, Dilys Chen, David A Frank, Sarah Walker, Charles V Clevenger, Rulla M Tamimi, Shelley S Tworoger, Susan E Hankinson","doi":"10.1186/s13058-023-01618-3","DOIUrl":"10.1186/s13058-023-01618-3","url":null,"abstract":"<p><strong>Background: </strong>Higher circulating prolactin has been associated with increased breast cancer risk. Prolactin binding to the prolactin receptor (PRLR) can activate the transcription factor STAT5, thus, we examined the association between plasma prolactin and breast cancer risk by tumor expression of PRLR, STAT5, and the upstream kinase JAK2.</p><p><strong>Methods: </strong>Using data from 745 cases and 2454 matched controls in the Nurses' Health Study, we conducted polytomous logistic regression to examine the association between prolactin (> 11 ng/mL vs. ≤ 11 ng/mL) measured within 10 years of diagnosis and breast cancer risk by PRLR (nuclear [N], cytoplasmic [C]), phosphorylated STAT5 (pSTAT5; N, C), and phosphorylated JAK2 (pJAK2; C) tumor expression. Analyses were conducted separately in premenopausal (n = 168 cases, 765 controls) and postmenopausal women (n = 577 cases, 1689 controls).</p><p><strong>Results: </strong>In premenopausal women, prolactin levels > 11 ng/mL were positively associated with risk of tumors positive for pSTAT5-N (OR 2.30, 95% CI 1.02-5.22) and pSTAT5-C (OR 1.64, 95% CI 1.01-2.65), but not tumors that were negative for these markers (OR 0.98, 95% CI 0.65-1.46 and OR 0.73, 95% CI 0.43-1.25; p-heterogeneity = 0.06 and 0.02, respectively). This was stronger when tumors were positive for both pSTAT5-N and pSTAT5-C (OR 2.88, 95% CI 1.14-7.25). No association was observed for PRLR or pJAK2 (positive or negative) and breast cancer risk among premenopausal women. Among postmenopausal women, plasma prolactin levels were positively associated with breast cancer risk irrespective of PRLR, pSTAT5, or pJAK2 expression (all p-heterogeneity ≥ 0.21).</p><p><strong>Conclusion: </strong>We did not observe clear differences in the association between plasma prolactin and breast cancer risk by tumor expression of PRLR or pJAK2, although associations for premenopausal women were observed for pSTAT5 positive tumors only. While additional studies are needed, this suggests that prolactin may act on human breast tumor development through alternative pathways.</p>","PeriodicalId":9283,"journal":{"name":"Breast Cancer Research : BCR","volume":"25 1","pages":"24"},"PeriodicalIF":0.0,"publicationDate":"2023-03-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9990334/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9187150","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Lineage plasticity enables low-ER luminal tumors to evolve and gain basal-like traits. 谱系可塑性使低er管腔肿瘤进化并获得基底样特征。
Pub Date : 2023-03-01 DOI: 10.1186/s13058-023-01621-8
Gadisti Aisha Mohamed, Sundis Mahmood, Nevena B Ognjenovic, Min Kyung Lee, Owen M Wilkins, Brock C Christensen, Kristen E Muller, Diwakar R Pattabiraman

Stratifying breast cancer into specific molecular or histologic subtypes aids in therapeutic decision-making and predicting outcomes; however, these subtypes may not be as distinct as previously thought. Patients with luminal-like, estrogen receptor (ER)-expressing tumors have better prognosis than patients with more aggressive, triple-negative or basal-like tumors. There is, however, a subset of luminal-like tumors that express lower levels of ER, which exhibit more basal-like features. We have found that breast tumors expressing lower levels of ER, traditionally considered to be luminal-like, represent a distinct subset of breast cancer characterized by the emergence of basal-like features. Lineage tracing of low-ER tumors in the MMTV-PyMT mouse mammary tumor model revealed that basal marker-expressing cells arose from normal luminal epithelial cells, suggesting that luminal-to-basal plasticity is responsible for the evolution and emergence of basal-like characteristics. This plasticity allows tumor cells to gain a new lumino-basal phenotype, thus leading to intratumoral lumino-basal heterogeneity. Single-cell RNA sequencing revealed SOX10 as a potential driver for this plasticity, which is known among breast tumors to be almost exclusively expressed in triple-negative breast cancer (TNBC) and was also found to be highly expressed in low-ER tumors. These findings suggest that basal-like tumors may result from the evolutionary progression of luminal tumors with low ER expression.

将乳腺癌分层为特定的分子或组织学亚型有助于治疗决策和预测预后;然而,这些亚型可能并不像以前认为的那样明显。发光样、雌激素受体(ER)表达肿瘤患者预后优于侵袭性更强、三阴性或基底样肿瘤患者。然而,有一小部分发光样肿瘤表达较低水平的ER,表现出更多的基底样特征。我们发现,表达较低水平ER的乳腺肿瘤,传统上被认为是发光样的,代表了以基底样特征出现为特征的乳腺癌的一个独特亚群。MMTV-PyMT小鼠乳腺肿瘤模型中低er肿瘤的谱系追踪显示,基底表达标志物的细胞起源于正常的腔上皮细胞,这表明基底样特征的进化和出现与光-基底可塑性有关。这种可塑性允许肿瘤细胞获得一种新的发光基底表型,从而导致肿瘤内发光基底异质性。单细胞RNA测序显示SOX10是这种可塑性的潜在驱动因素,已知在乳腺肿瘤中几乎只在三阴性乳腺癌(TNBC)中表达,并且在低er肿瘤中也被发现高表达。这些发现提示基底样肿瘤可能是低ER表达的管腔肿瘤进化过程的结果。
{"title":"Lineage plasticity enables low-ER luminal tumors to evolve and gain basal-like traits.","authors":"Gadisti Aisha Mohamed,&nbsp;Sundis Mahmood,&nbsp;Nevena B Ognjenovic,&nbsp;Min Kyung Lee,&nbsp;Owen M Wilkins,&nbsp;Brock C Christensen,&nbsp;Kristen E Muller,&nbsp;Diwakar R Pattabiraman","doi":"10.1186/s13058-023-01621-8","DOIUrl":"https://doi.org/10.1186/s13058-023-01621-8","url":null,"abstract":"<p><p>Stratifying breast cancer into specific molecular or histologic subtypes aids in therapeutic decision-making and predicting outcomes; however, these subtypes may not be as distinct as previously thought. Patients with luminal-like, estrogen receptor (ER)-expressing tumors have better prognosis than patients with more aggressive, triple-negative or basal-like tumors. There is, however, a subset of luminal-like tumors that express lower levels of ER, which exhibit more basal-like features. We have found that breast tumors expressing lower levels of ER, traditionally considered to be luminal-like, represent a distinct subset of breast cancer characterized by the emergence of basal-like features. Lineage tracing of low-ER tumors in the MMTV-PyMT mouse mammary tumor model revealed that basal marker-expressing cells arose from normal luminal epithelial cells, suggesting that luminal-to-basal plasticity is responsible for the evolution and emergence of basal-like characteristics. This plasticity allows tumor cells to gain a new lumino-basal phenotype, thus leading to intratumoral lumino-basal heterogeneity. Single-cell RNA sequencing revealed SOX10 as a potential driver for this plasticity, which is known among breast tumors to be almost exclusively expressed in triple-negative breast cancer (TNBC) and was also found to be highly expressed in low-ER tumors. These findings suggest that basal-like tumors may result from the evolutionary progression of luminal tumors with low ER expression.</p>","PeriodicalId":9283,"journal":{"name":"Breast Cancer Research : BCR","volume":"25 1","pages":"23"},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9979432/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10115087","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
CMTM7 inhibits breast cancer progression by regulating Wnt/β-catenin signaling. CMTM7通过调节Wnt/β-catenin信号传导抑制乳腺癌进展。
Pub Date : 2023-02-24 DOI: 10.1186/s13058-023-01620-9
Zhao-Hui Chen, Yao Tian, Guang-Lei Zhou, Hao-Ran Yue, Xue-Jie Zhou, Hai-Yan Ma, Jie Ge, Xin Wang, Xu-Chen Cao, Yue Yu

Background: Breast cancer is the major cause of death in females globally. Chemokine-like factor like MARVEL transmembrane domain containing 7 (CMTM7) is reported as a tumor suppressor and is involved in epidermal growth factor receptor degradation and PI3K/AKT signaling in previous studies. However, other molecular mechanisms of CMTM7 remain unclear.

Methods: The expression level of CMTM7 in breast cancer cells and tissues was detected by qRT-PCR and western blot, and the methylation of CMTM7 promoter was detected by BSP sequencing. The effect of CMTM7 was verified both in vitro and in vivo, including MTT, colony formation, EdU assay, transwell assay and wound healing assay. The interaction between CMTM7 and CTNNA1 was investigated by co-IP assay. The regulation of miR-182-5p on CMTM7 and TCF3 on miR-182-5p was detected by luciferase reporter assay and ChIP analysis.

Results: This study detected the hypermethylation levels of the CMTM7 promoter region in breast cancer tissues and cell lines. CMTM7 was performed as a tumor suppressor both in vitro and in vivo. Furthermore, CMTM7 was a direct miR-182-5p target. Besides, we found that CMTM7 could interact with Catenin Alpha 1 (CTNNA1) and regulate Wnt/β-catenin signaling. Finally, transcription factor 3 (TCF3) can regulate miR-182-5p. We identified a feedback loop with the composition of miR-182-5p, CMTM7, CTNNA1, CTNNB1 (β-catenin), and TCF3, which play essential roles in breast cancer progression.

Conclusion: These findings reveal the emerging character of CMTM7 in Wnt/β-catenin signaling and bring new sights of gene interaction. CMTM7 and other elements in the feedback loop may serve as emerging targets for breast cancer therapy.

背景:乳腺癌是全球女性死亡的主要原因。趋化因子样因子如MARVEL跨膜域7 (CMTM7)被报道为肿瘤抑制因子,参与表皮生长因子受体降解和PI3K/AKT信号转导。然而,CMTM7的其他分子机制尚不清楚。方法:采用qRT-PCR和western blot检测CMTM7在乳腺癌细胞和组织中的表达水平,采用BSP测序检测CMTM7启动子的甲基化程度。通过体外和体内MTT、菌落形成、EdU、transwell和伤口愈合实验验证CMTM7的作用。采用co-IP法研究CMTM7与CTNNA1的相互作用。通过荧光素酶报告基因法和ChIP分析检测miR-182-5p对CMTM7和TCF3对miR-182-5p的调控。结果:本研究检测了乳腺癌组织和细胞系中CMTM7启动子区域的高甲基化水平。CMTM7在体内和体外均作为肿瘤抑制因子。此外,CMTM7是miR-182-5p的直接靶点。此外,我们发现CMTM7可以与Catenin α 1 (CTNNA1)相互作用,调节Wnt/β-catenin信号传导。最后,转录因子3 (TCF3)可以调控miR-182-5p。我们发现了一个由miR-182-5p、CMTM7、CTNNA1、CTNNB1 (β-catenin)和TCF3组成的反馈回路,它们在乳腺癌进展中发挥重要作用。结论:这些发现揭示了CMTM7在Wnt/β-catenin信号传导中的新特征,为基因相互作用带来了新的视角。CMTM7和反馈回路中的其他元素可能成为乳腺癌治疗的新靶点。
{"title":"CMTM7 inhibits breast cancer progression by regulating Wnt/β-catenin signaling.","authors":"Zhao-Hui Chen,&nbsp;Yao Tian,&nbsp;Guang-Lei Zhou,&nbsp;Hao-Ran Yue,&nbsp;Xue-Jie Zhou,&nbsp;Hai-Yan Ma,&nbsp;Jie Ge,&nbsp;Xin Wang,&nbsp;Xu-Chen Cao,&nbsp;Yue Yu","doi":"10.1186/s13058-023-01620-9","DOIUrl":"https://doi.org/10.1186/s13058-023-01620-9","url":null,"abstract":"<p><strong>Background: </strong>Breast cancer is the major cause of death in females globally. Chemokine-like factor like MARVEL transmembrane domain containing 7 (CMTM7) is reported as a tumor suppressor and is involved in epidermal growth factor receptor degradation and PI3K/AKT signaling in previous studies. However, other molecular mechanisms of CMTM7 remain unclear.</p><p><strong>Methods: </strong>The expression level of CMTM7 in breast cancer cells and tissues was detected by qRT-PCR and western blot, and the methylation of CMTM7 promoter was detected by BSP sequencing. The effect of CMTM7 was verified both in vitro and in vivo, including MTT, colony formation, EdU assay, transwell assay and wound healing assay. The interaction between CMTM7 and CTNNA1 was investigated by co-IP assay. The regulation of miR-182-5p on CMTM7 and TCF3 on miR-182-5p was detected by luciferase reporter assay and ChIP analysis.</p><p><strong>Results: </strong>This study detected the hypermethylation levels of the CMTM7 promoter region in breast cancer tissues and cell lines. CMTM7 was performed as a tumor suppressor both in vitro and in vivo. Furthermore, CMTM7 was a direct miR-182-5p target. Besides, we found that CMTM7 could interact with Catenin Alpha 1 (CTNNA1) and regulate Wnt/β-catenin signaling. Finally, transcription factor 3 (TCF3) can regulate miR-182-5p. We identified a feedback loop with the composition of miR-182-5p, CMTM7, CTNNA1, CTNNB1 (β-catenin), and TCF3, which play essential roles in breast cancer progression.</p><p><strong>Conclusion: </strong>These findings reveal the emerging character of CMTM7 in Wnt/β-catenin signaling and bring new sights of gene interaction. CMTM7 and other elements in the feedback loop may serve as emerging targets for breast cancer therapy.</p>","PeriodicalId":9283,"journal":{"name":"Breast Cancer Research : BCR","volume":"25 1","pages":"22"},"PeriodicalIF":0.0,"publicationDate":"2023-02-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9960403/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10801326","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Transcriptomic intratumor heterogeneity of breast cancer patient-derived organoids may reflect the unique biological features of the tumor of origin. 乳腺癌患者源性类器官的肿瘤内转录组异质性可能反映了肿瘤起源的独特生物学特征。
Pub Date : 2023-02-21 DOI: 10.1186/s13058-023-01617-4
Sumito Saeki, Kohei Kumegawa, Yoko Takahashi, Liying Yang, Tomo Osako, Mahmut Yasen, Kazutaka Otsuji, Kenichi Miyata, Kaoru Yamakawa, Jun Suzuka, Yuri Sakimoto, Yukinori Ozaki, Toshimi Takano, Takeshi Sano, Tetsuo Noda, Shinji Ohno, Ryoji Yao, Takayuki Ueno, Reo Maruyama

Background: The intratumor heterogeneity (ITH) of cancer cells plays an important role in breast cancer resistance and recurrence. To develop better therapeutic strategies, it is necessary to understand the molecular mechanisms underlying ITH and their functional significance. Patient-derived organoids (PDOs) have recently been utilized in cancer research. They can also be used to study ITH as cancer cell diversity is thought to be maintained within the organoid line. However, no reports investigated intratumor transcriptomic heterogeneity in organoids derived from patients with breast cancer. This study aimed to investigate transcriptomic ITH in breast cancer PDOs.

Methods: We established PDO lines from ten patients with breast cancer and performed single-cell transcriptomic analysis. First, we clustered cancer cells for each PDO using the Seurat package. Then, we defined and compared the cluster-specific gene signature (ClustGS) corresponding to each cell cluster in each PDO.

Results: Cancer cells were clustered into 3-6 cell populations with distinct cellular states in each PDO line. We identified 38 clusters with ClustGS in 10 PDO lines and used Jaccard similarity index to compare the similarity of these signatures. We found that 29 signatures could be categorized into 7 shared meta-ClustGSs, such as those related to the cell cycle or epithelial-mesenchymal transition, and 9 signatures were unique to single PDO lines. These unique cell populations appeared to represent the characteristics of the original tumors derived from patients.

Conclusions: We confirmed the existence of transcriptomic ITH in breast cancer PDOs. Some cellular states were commonly observed in multiple PDOs, whereas others were specific to single PDO lines. The combination of these shared and unique cellular states formed the ITH of each PDO.

背景:肿瘤细胞的肿瘤内异质性(ITH)在乳腺癌的耐药和复发中起着重要作用。为了制定更好的治疗策略,有必要了解ITH的分子机制及其功能意义。近年来,患者源性类器官(PDOs)已被用于癌症研究。它们也可以用于研究ITH,因为癌细胞多样性被认为是在类器官系内维持的。然而,尚无报道调查乳腺癌患者的类器官的肿瘤内转录组异质性。本研究旨在探讨乳腺癌PDOs的转录组学ITH。方法:从10例乳腺癌患者中建立PDO细胞系,进行单细胞转录组学分析。首先,我们使用Seurat包对每个PDO的癌细胞进行聚类。然后,我们定义并比较了每个PDO中每个细胞簇对应的簇特异性基因特征(ClustGS)。结果:在每个PDO细胞系中,癌细胞聚集成3-6个细胞群,细胞状态不同。我们在10个PDO行中使用clustergs识别出38个聚类,并使用Jaccard相似性指数比较这些特征的相似性。我们发现29个特征可以被归类为7个共享的meta- cluster gss,例如那些与细胞周期或上皮-间质转化有关的特征,9个特征是单个PDO系所独有的。这些独特的细胞群似乎代表了来自患者的原始肿瘤的特征。结论:我们证实了乳腺癌PDOs中存在转录组性ITH。一些细胞状态通常在多个PDO中观察到,而另一些则特定于单个PDO系。这些共享的和独特的细胞状态的组合形成了每个PDO的ITH。
{"title":"Transcriptomic intratumor heterogeneity of breast cancer patient-derived organoids may reflect the unique biological features of the tumor of origin.","authors":"Sumito Saeki,&nbsp;Kohei Kumegawa,&nbsp;Yoko Takahashi,&nbsp;Liying Yang,&nbsp;Tomo Osako,&nbsp;Mahmut Yasen,&nbsp;Kazutaka Otsuji,&nbsp;Kenichi Miyata,&nbsp;Kaoru Yamakawa,&nbsp;Jun Suzuka,&nbsp;Yuri Sakimoto,&nbsp;Yukinori Ozaki,&nbsp;Toshimi Takano,&nbsp;Takeshi Sano,&nbsp;Tetsuo Noda,&nbsp;Shinji Ohno,&nbsp;Ryoji Yao,&nbsp;Takayuki Ueno,&nbsp;Reo Maruyama","doi":"10.1186/s13058-023-01617-4","DOIUrl":"https://doi.org/10.1186/s13058-023-01617-4","url":null,"abstract":"<p><strong>Background: </strong>The intratumor heterogeneity (ITH) of cancer cells plays an important role in breast cancer resistance and recurrence. To develop better therapeutic strategies, it is necessary to understand the molecular mechanisms underlying ITH and their functional significance. Patient-derived organoids (PDOs) have recently been utilized in cancer research. They can also be used to study ITH as cancer cell diversity is thought to be maintained within the organoid line. However, no reports investigated intratumor transcriptomic heterogeneity in organoids derived from patients with breast cancer. This study aimed to investigate transcriptomic ITH in breast cancer PDOs.</p><p><strong>Methods: </strong>We established PDO lines from ten patients with breast cancer and performed single-cell transcriptomic analysis. First, we clustered cancer cells for each PDO using the Seurat package. Then, we defined and compared the cluster-specific gene signature (ClustGS) corresponding to each cell cluster in each PDO.</p><p><strong>Results: </strong>Cancer cells were clustered into 3-6 cell populations with distinct cellular states in each PDO line. We identified 38 clusters with ClustGS in 10 PDO lines and used Jaccard similarity index to compare the similarity of these signatures. We found that 29 signatures could be categorized into 7 shared meta-ClustGSs, such as those related to the cell cycle or epithelial-mesenchymal transition, and 9 signatures were unique to single PDO lines. These unique cell populations appeared to represent the characteristics of the original tumors derived from patients.</p><p><strong>Conclusions: </strong>We confirmed the existence of transcriptomic ITH in breast cancer PDOs. Some cellular states were commonly observed in multiple PDOs, whereas others were specific to single PDO lines. The combination of these shared and unique cellular states formed the ITH of each PDO.</p>","PeriodicalId":9283,"journal":{"name":"Breast Cancer Research : BCR","volume":"25 1","pages":"21"},"PeriodicalIF":0.0,"publicationDate":"2023-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9942352/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10856907","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Diagnostic accuracy of a three-protein signature in women with suspicious breast lesions: a multicenter prospective trial. 三蛋白标记在可疑乳腺病变女性中的诊断准确性:一项多中心前瞻性试验
Pub Date : 2023-02-14 DOI: 10.1186/s13058-023-01616-5
Eun-Shin Lee, Yumi Kim, Hee-Chul Shin, Ki-Tae Hwang, Junwon Min, Min Kyoon Kim, SooKyung Ahn, So-Youn Jung, Hyukjai Shin, MinSung Chung, Tae-Kyung Yoo, Seungpil Jung, Sang Uk Woo, Ju-Yeon Kim, Dong-Young Noh, Hyeong-Gon Moon

Background: Mammography screening has been proven to detect breast cancer at an early stage and reduce mortality; however, it has low accuracy in young women or women with dense breasts. Blood-based diagnostic tools may overcome the limitations of mammography. This study assessed the diagnostic performance of a three-protein signature in patients with suspicious breast lesions.

Findings: This trial (MAST; KCT0004847) was a prospective multicenter observational trial. Three-protein signature values were obtained using serum and plasma from women with suspicious lesions for breast malignancy before tumor biopsy. Additionally, blood samples from women who underwent clear or benign mammography were collected for the assays. Among 642 participants, the sensitivity, specificity, and overall accuracy values of the three-protein signature were 74.4%, 66.9%, and 70.6%, respectively, and the concordance index was 0.698 (95% CI 0.656, 0.739). The diagnostic performance was not affected by the demographic features, clinicopathologic characteristics, and co-morbidities of the participants.

Conclusions: The present trial showed an accuracy of 70.6% for the three-protein signature. Considering the value of blood-based biomarkers for the early detection of breast malignancies, further evaluation of this proteomic assay is warranted in larger, population-level trials. This Multi-protein Assessment using Serum to deTermine breast lesion malignancy (MAST) was registered at the Clinical Research Information Service of Korea with the identification number of KCT0004847 ( https://cris.nih.go.kr ).

背景:乳房x线摄影筛查已被证明可以在早期发现乳腺癌并降低死亡率;然而,在年轻女性或乳房致密的女性中,它的准确性很低。基于血液的诊断工具可能克服乳房x光检查的局限性。本研究评估了三蛋白标记在可疑乳腺病变患者中的诊断性能。结果:该试验(MAST;KCT0004847)是一项前瞻性多中心观察性试验。在肿瘤活检前使用可疑乳腺恶性病变妇女的血清和血浆获得三蛋白特征值。此外,从接受透明或良性乳房x光检查的妇女收集血液样本进行分析。在642名受试者中,三蛋白特征的敏感性、特异性和总体准确性分别为74.4%、66.9%和70.6%,一致性指数为0.698 (95% CI为0.656,0.739)。诊断表现不受人口统计学特征、临床病理特征和参与者的合并症的影响。结论:本试验显示三蛋白标记的准确性为70.6%。考虑到基于血液的生物标志物对乳腺恶性肿瘤早期检测的价值,需要在更大规模的人群水平试验中进一步评估这种蛋白质组学分析。该血清多蛋白鉴定乳腺病变恶性(MAST)已在韩国临床研究信息院注册,识别号为KCT0004847 (https://cris.nih.go.kr)。
{"title":"Diagnostic accuracy of a three-protein signature in women with suspicious breast lesions: a multicenter prospective trial.","authors":"Eun-Shin Lee,&nbsp;Yumi Kim,&nbsp;Hee-Chul Shin,&nbsp;Ki-Tae Hwang,&nbsp;Junwon Min,&nbsp;Min Kyoon Kim,&nbsp;SooKyung Ahn,&nbsp;So-Youn Jung,&nbsp;Hyukjai Shin,&nbsp;MinSung Chung,&nbsp;Tae-Kyung Yoo,&nbsp;Seungpil Jung,&nbsp;Sang Uk Woo,&nbsp;Ju-Yeon Kim,&nbsp;Dong-Young Noh,&nbsp;Hyeong-Gon Moon","doi":"10.1186/s13058-023-01616-5","DOIUrl":"https://doi.org/10.1186/s13058-023-01616-5","url":null,"abstract":"<p><strong>Background: </strong>Mammography screening has been proven to detect breast cancer at an early stage and reduce mortality; however, it has low accuracy in young women or women with dense breasts. Blood-based diagnostic tools may overcome the limitations of mammography. This study assessed the diagnostic performance of a three-protein signature in patients with suspicious breast lesions.</p><p><strong>Findings: </strong>This trial (MAST; KCT0004847) was a prospective multicenter observational trial. Three-protein signature values were obtained using serum and plasma from women with suspicious lesions for breast malignancy before tumor biopsy. Additionally, blood samples from women who underwent clear or benign mammography were collected for the assays. Among 642 participants, the sensitivity, specificity, and overall accuracy values of the three-protein signature were 74.4%, 66.9%, and 70.6%, respectively, and the concordance index was 0.698 (95% CI 0.656, 0.739). The diagnostic performance was not affected by the demographic features, clinicopathologic characteristics, and co-morbidities of the participants.</p><p><strong>Conclusions: </strong>The present trial showed an accuracy of 70.6% for the three-protein signature. Considering the value of blood-based biomarkers for the early detection of breast malignancies, further evaluation of this proteomic assay is warranted in larger, population-level trials. This Multi-protein Assessment using Serum to deTermine breast lesion malignancy (MAST) was registered at the Clinical Research Information Service of Korea with the identification number of KCT0004847 ( https://cris.nih.go.kr ).</p>","PeriodicalId":9283,"journal":{"name":"Breast Cancer Research : BCR","volume":"25 1","pages":"20"},"PeriodicalIF":0.0,"publicationDate":"2023-02-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9930228/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10800001","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
期刊
Breast Cancer Research : BCR
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1