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Microbiological profile of long COVID and associated clinical and radiological findings: a prospective cross-sectional study. 长 COVID 微生物特征及相关临床和放射学结果:一项前瞻性横断面研究。
Pub Date : 2024-09-04 DOI: 10.1093/labmed/lmae010
Monalisa Dey, Baijayantimala Mishra, Prasanta Raghab Mohapatra, Sudipta Mohakud, Bijayini Behera

Objective: To study the frequency of microbiological etiology of respiratory infections in patients with long COVID and their associated clinical and radiological findings.

Methods: Nasopharyngeal swabs and sputum specimens were collected from 97 patients with respiratory illness stemming from long COVID. The specimens were assessed for their microbiological profile (bacteria and virus) and their association with the overall clinical and radiological picture.

Results: In total, 23 (24%) patients with long COVID had viral infection (n = 12), bacterial infection (n = 9), or coinfection (n = 2). Microorganisms were detected at significantly higher rates in hospitalized patients, patients with moderate COVID-19, and patients with asthma (P < .05). Tachycardia (65%) was the most common symptom at presentation. A statistically significant number of patients with long COVID who had viral infection presented with cough and myalgia; and a statistically significant number of patients with long COVID who had bacterial infection presented with productive coughing (P < .05). Post-COVID fibrotic changes were found in 61% of cohort patients (31/51).

Conclusion: A decreasing trend of respiratory pathogens (enveloped viruses and bacteria) was found in long COVID. An analysis including a larger group of viral- or bacterial-infected patients with long COVID is needed to obtain high-level evidence on the presenting symptoms (cough, myalgia) and their association with the underlying comorbidities and severity.

目的研究长期慢性阻塞性肺气肿患者呼吸道感染的微生物病因及其相关的临床和影像学结果:方法:从97名长期COVID引起的呼吸道疾病患者中采集鼻咽拭子和痰标本。评估标本的微生物学特征(细菌和病毒)及其与整体临床和放射学检查结果的关联:结果:共有 23 名(24%)长期 COVID 患者有病毒感染(12 人)、细菌感染(9 人)或合并感染(2 人)。在住院患者、中度 COVID-19 患者和哮喘患者中,微生物的检出率明显更高(P < .05)。心动过速(65%)是发病时最常见的症状。长COVID患者中有相当数量的病毒感染者表现为咳嗽和肌痛;长COVID患者中有相当数量的细菌感染者表现为有痰咳嗽(P < .05)。61%的患者(31/51)在COVID后出现纤维化改变:结论:长期 COVID 发现呼吸道病原体(包膜病毒和细菌)呈下降趋势。需要对更大范围的病毒或细菌感染的长COVID患者进行分析,以获得关于主要症状(咳嗽、肌痛)及其与潜在并发症和严重程度的关系的高级证据。
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引用次数: 0
The identification of a novel compound heterozygous mutation in hereditary human coagulation factor VII deficiency following a bamboo leaf green snake bite. 在被竹叶青蛇咬伤后,鉴定出遗传性人类凝血因子 VII 缺乏症的新型复合杂合突变。
Pub Date : 2024-09-04 DOI: 10.1093/labmed/lmae012
Chuanghua Qiu, Chunxiu Huang, Xueyan Chen, Dayong Gu

Hereditary factor VII (FVII) deficiency is an uncommon autosomal recessive disorder associated with mutations in the F7 gene, and laboratory investigations usually reveal isolated prolongation in prothrombin time (PT)/international normalized ratio (INR). Venom-induced consumptive coagulopathy (VICC) is distinguished by the activation of the coagulation pathway, which is triggered by procoagulant toxins in snake venom. Diagnosing snakebites in patients with hereditary FVII deficiency presents a challenge because prolonged time PT/INR is considered the most valuable diagnostic method for VICC. Therefore, it is possible that certain patients may not promptly receive an accurate diagnosis of hereditary FVII deficiency. We present a pedigree featuring hereditary FVII deficiency, which was diagnosed through Sanger sequencing, following a bamboo leaf green snake bite.

遗传性因子 VII(FVII)缺乏症是一种不常见的常染色体隐性遗传疾病,与 F7 基因的突变有关,实验室检查通常会发现凝血酶原时间(PT)/国际标准化比值(INR)的个别延长。毒液诱发的消耗性凝血病(VICC)是由蛇毒中的促凝血毒素引发的凝血途径活化所致。诊断遗传性 FVII 缺乏症患者的蛇咬伤是一项挑战,因为 PT/INR 延长时间被认为是 VICC 最有价值的诊断方法。因此,某些患者可能无法及时得到遗传性 FVII 缺乏症的准确诊断。我们介绍了一个具有遗传性 FVII 缺乏症的血统,该患者是在被竹叶青蛇咬伤后通过桑格测序确诊的。
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引用次数: 0
Cystic fibrosis-related diabetes screening at a large pediatric center. 大型儿科中心的囊性纤维化相关糖尿病筛查。
Pub Date : 2024-09-04 DOI: 10.1093/labmed/lmae009
Anil K Chokkalla, Pamela Tuley, Miray Kurtca, Herda Ona, Fadel E Ruiz, Sridevi Devaraj

Objective: Cystic Fibrosis Foundation guidelines recommend annual diabetes screening by oral glucose tolerance test (OGTT) in pediatric patients with cystic fibrosis (CF) starting at the age of 10 years. Adherence to these guidelines proves to be challenging, and the nationwide screening rates are still considered suboptimal. The aim of this study was to assess and improve the screening rates at our large pediatric center.

Methods: A 4-year retrospective audit of OGTT completion among pediatric patients with CF of age ≥10 years who are not yet diagnosed with diabetes was conducted. A collaborative working group was formed to identify the barriers to screening and formulate a quality improvement plan, which was monitored and evaluated for a 9-month period.

Results: Diabetes screening rates determined by OGTT completion at our center showed a gradual decline during the COVID-19 pandemic from 2019 to 2022. Following the implementation of the quality improvement plan during the summer of 2023, there was a marked increase in OGTT ordering compliance by providers as well as test completion by patients. Notably, the fractional OGTT completion rate rose from 45% during the preintervention phase (January-April 2023) to 70% during the postintervention phase (May-September 2023).

Conclusion: Diabetes screening in pediatric patients with CF can be effectively improved by refining practices related to patient experience, care coordination, and laboratory testing strategies.

目的:囊性纤维化基金会指南建议囊性纤维化(CF)儿童患者从 10 岁开始每年通过口服葡萄糖耐量试验(OGTT)进行糖尿病筛查。事实证明,遵守这些指南具有挑战性,全国范围内的筛查率仍被认为是不理想的。本研究旨在评估并提高我们大型儿科中心的筛查率:方法:我们对年龄≥10 岁、尚未确诊糖尿病的 CF 儿科患者的 OGTT 完成情况进行了为期 4 年的回顾性审核。我们成立了一个合作工作组,以确定筛查的障碍并制定质量改进计划,并对该计划进行了为期 9 个月的监测和评估:结果:我们中心根据 OGTT 完成情况确定的糖尿病筛查率在 COVID-19 大流行期间(2019 年至 2022 年)呈逐步下降趋势。在 2023 年夏季实施质量改进计划后,医疗服务提供者的 OGTT 下单依从性和患者的测试完成率均显著提高。值得注意的是,在干预前阶段(2023 年 1 月至 4 月),OGTT 完成率从 45% 上升到干预后阶段(2023 年 5 月至 9 月)的 70%:通过改进与患者体验、护理协调和实验室检测策略相关的实践,可有效改善 CF 儿科患者的糖尿病筛查。
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引用次数: 0
Evaluation of some nonroutine cardiac biomarkers among adults and children with beta-thalassemia major. 评估重型地中海贫血成人和儿童的一些非常规心脏生物标志物。
Pub Date : 2024-09-04 DOI: 10.1093/labmed/lmae007
Abdulkareem M Jewad, Ameer J Shwayel

Background: Cardiac injury caused by iron overload is the leading cause of mortality and morbidity in patients with beta-thalassemia, owing to frequent blood transfusion, increased iron overload, and blood hemolysis.

Objective: This research aimed to assess several novel cardiac biomarkers in the blood samples of children and adult patients with beta-thalassemia major (βTM), along with their respective control groups. These biomarkers included endothelin 1 (ET-1), N-terminal pro-brain natriuretic peptide (NT-proBNP), atrial natriuretic peptide (ANP), growth differentiation factor-15 (GDF-15), and renalase (RNLS).

Methods: This case-control study was done on 46 patients with βTM (23 children <18 years, and 23 adults ≥18 years) from the Genetic Hematology Center in Thi-Qar province, Iraq, and 42 comparable controls in 2 groups (21 for each group) in the period from February to April 2023.

Results: Levels of ET-1, NT-proBNP, ANP, GDF-15, RNLS, and ferritin were higher in the children and adults with βTM than in the control subjects.

Conclusion: Elevations of the novel cardiac biomarkers ET-1, NT-proBNP, ANP, GDF-15, and RNLS in the sera of children and adult patients with βTM when compared with comparable control subjects confirm that the majority of patients with βTM are at risk of cardiac and cardiovascular complications even when there are no obvious symptoms, especially in children, which gives suitable predictive biomarkers.

背景:由于频繁输血、铁超载和血液溶血,铁超载引起的心脏损伤是导致β地中海贫血患者死亡和发病的主要原因:本研究旨在评估重型β地中海贫血(βTM)儿童和成人患者及其各自对照组血液样本中的几种新型心脏生物标志物。这些生物标志物包括内皮素 1(ET-1)、N 端前脑钠肽 (NT-proBNP)、心房钠肽(ANP)、生长分化因子-15(GDF-15)和肾酶(RNLS):这项病例对照研究的对象是 46 名 βTM 患者(23 名儿童):βTM儿童和成人患者的ET-1、NT-proBNP、ANP、GDF-15、RNLS和铁蛋白水平均高于对照组:结论:与相似的对照组相比,βTM 儿童和成人患者血清中新型心脏生物标志物 ET-1、NT-proBNP、ANP、GDF-15 和 RNLS 的升高证实,即使没有明显症状,大多数βTM 患者仍有发生心脏和心血管并发症的风险,尤其是儿童患者,这提供了合适的预测性生物标志物。
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引用次数: 0
Differences in the levels of the appetite peptides ghrelin, peptide tyrosine tyrosine, and glucagon-like peptide-1 between obesity classes and lean controls. 肥胖症与瘦弱对照组之间食欲肽胃泌素、肽酪氨酸酪氨酸和胰高血糖素样肽-1水平的差异。
Pub Date : 2024-09-04 DOI: 10.1093/labmed/lmae004
Gülşah Alyar, Fatma Zühal Umudum

Objective: This study was designed to compare basal concentrations of the gastrointestinal appetite modulators ghrelin, peptide tyrosine tyrosine (PYY), and glucagon-like peptide 1 (GLP-1) between obesity classes and obesity classes and controls.

Methods: The study included 49 healthy controls with body mass index (BMI) between 18.5 and 29.9 kg/m² and 62 individuals with obesity with BMI ≥30 kg/m². Basal ghrelin, PYY, and GLP-1 concentrations of the samples were analyzed by an enzyme-linked immunosorbent assay commercial kit (SunRed Human). Other biochemical parameters were measured by a clinical chemistry autoanalyzer (Beckman Coulter AU 5800) in the biochemistry laboratory.

Results: Compared with the control group, ghrelin, PYY, and GLP-1 levels were significantly lower in the obese group (P < .05). The PYY concentration was significantly different between obese groups (P < .05). The PYY and GLP-1 levels were significantly different between obesity class I and obesity class III. In addition, ghrelin levels were significantly different between obesity class II and obesity class III. Correlation analysis revealed a negative correlation between BMI and serum ghrelin, GLP-1, and PYY concentrations.

Conclusion: Low basal ghrelin, GLP-1, and PYY hormones in the obese group compared with the control group indicate impaired appetite regulation in this population. The significant difference in PYY levels between obese groups was associated with increasing obesity grade.

研究目的本研究旨在比较肥胖等级与肥胖等级和对照组之间胃肠道食欲调节剂胃泌素、肽酪氨酸酪氨酸(PYY)和胰高血糖素样肽 1(GLP-1)的基础浓度:研究对象包括体重指数(BMI)在 18.5 至 29.9 kg/m² 之间的 49 名健康对照者和体重指数≥30 kg/m² 的 62 名肥胖者。样本中的基础胃泌素、PYY和GLP-1浓度通过酶联免疫吸附测定商业试剂盒(SunRed Human)进行分析。其他生化指标由生化实验室的临床化学自动分析仪(Beckman Coulter AU 5800)测定:结果:与对照组相比,肥胖组的胃泌素、PYY 和 GLP-1 水平明显降低(P 结论:肥胖组的胃泌素、PYY 和 GLP-1 水平明显低于对照组:与对照组相比,肥胖组的基础胃泌素、GLP-1 和 PYY 激素水平较低,这表明该人群的食欲调节功能受损。肥胖组之间PYY水平的明显差异与肥胖等级的增加有关。
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引用次数: 0
Correction to: Interference of Hemoglobin Variants with HbA1c Measurements by Six Commonly Used HbA1c Methods. 更正:血红蛋白变异体对六种常用 HbA1c 测量方法的干扰。
Pub Date : 2024-08-20 DOI: 10.1093/labmed/lmae073
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引用次数: 0
Health disparities among incarcerated populations: a crucial laboratory and pathology review. 被监禁人群的健康差异:重要的实验室和病理学回顾。
Pub Date : 2024-08-19 DOI: 10.1093/labmed/lmae070
Diane Price Banks, Morgane McGuire, Von Samedi, Stephanie Whitehead, Melissa P Upton, Nicole R Jackson

Background: The United States notoriously has one of the highest rates of incarceration in the world, yet scant attention to the health care needs of those incarcerated exists within laboratory medicine and pathology training and education. This article explores health disparities among incarcerated and released individuals regarding diagnostic laboratory testing and pathology services.

Methods: A literature search was conducted for articles published between 2002 and 2023 using keywords including "healthcare," "incarcerated," "laboratory services," "pathology services," and "health insurance for prisoners." Central themes were extracted and discussed to reveal the realities of health care during and after release from incarceration. Excluded from the analysis were articles about the immediate or extended family of incarcerated persons.

Results: Incarcerated individuals have an increased risk for the development and exacerbation of communicable and noncommunicable diseases and mental health disorders, which results in exceedingly high morbidity and mortality rates.

Conclusion: Policy changes are needed to mitigate disparities and improve health outcomes for incarcerated and released persons. Central to these disparities is decreased access to laboratory and pathology services, impeded by inadequate health care funding for these carceral institutions. Providing additional funding to the carceral system's health care budget is necessary to improve access to pathology and laboratory services.

背景:众所周知,美国是世界上监禁率最高的国家之一,但在实验室医学和病理学的培训和教育中却很少关注被监禁者的医疗保健需求。本文探讨了被监禁者和刑满释放人员在实验室诊断检测和病理学服务方面的健康差异:使用 "医疗保健"、"被监禁者"、"实验室服务"、"病理学服务 "和 "囚犯的医疗保险 "等关键词对 2002 年至 2023 年间发表的文章进行了文献检索。我们提取并讨论了中心主题,以揭示监禁期间和释放后医疗保健的现实情况。有关被监禁者直系或旁系亲属的文章不在分析之列:结果:被监禁者罹患传染性和非传染性疾病以及精神疾病的风险增加,导致发病率和死亡率极高:需要改变政策,以减少差异并改善被监禁者和刑满释放人员的健康状况。造成这些差异的主要原因是,这些监禁机构的医疗资金不足,导致获得实验室和病理学服务的机会减少。有必要为监禁系统的医疗保健预算提供更多资金,以改善病理学和实验室服务的获取。
{"title":"Health disparities among incarcerated populations: a crucial laboratory and pathology review.","authors":"Diane Price Banks, Morgane McGuire, Von Samedi, Stephanie Whitehead, Melissa P Upton, Nicole R Jackson","doi":"10.1093/labmed/lmae070","DOIUrl":"https://doi.org/10.1093/labmed/lmae070","url":null,"abstract":"<p><strong>Background: </strong>The United States notoriously has one of the highest rates of incarceration in the world, yet scant attention to the health care needs of those incarcerated exists within laboratory medicine and pathology training and education. This article explores health disparities among incarcerated and released individuals regarding diagnostic laboratory testing and pathology services.</p><p><strong>Methods: </strong>A literature search was conducted for articles published between 2002 and 2023 using keywords including \"healthcare,\" \"incarcerated,\" \"laboratory services,\" \"pathology services,\" and \"health insurance for prisoners.\" Central themes were extracted and discussed to reveal the realities of health care during and after release from incarceration. Excluded from the analysis were articles about the immediate or extended family of incarcerated persons.</p><p><strong>Results: </strong>Incarcerated individuals have an increased risk for the development and exacerbation of communicable and noncommunicable diseases and mental health disorders, which results in exceedingly high morbidity and mortality rates.</p><p><strong>Conclusion: </strong>Policy changes are needed to mitigate disparities and improve health outcomes for incarcerated and released persons. Central to these disparities is decreased access to laboratory and pathology services, impeded by inadequate health care funding for these carceral institutions. Providing additional funding to the carceral system's health care budget is necessary to improve access to pathology and laboratory services.</p>","PeriodicalId":94124,"journal":{"name":"Laboratory medicine","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142006204","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular pathology and computational profiling of Janus kinase 2 (JAK2) mutation in acute lymphoblastic leukemia: insights from a Pakistani cohort. 急性淋巴细胞白血病中 Janus 激酶 2 (JAK2) 突变的分子病理学和计算分析:来自巴基斯坦队列的启示。
Pub Date : 2024-08-19 DOI: 10.1093/labmed/lmae071
Sidra Maqsood, Saqib Hussain Ansari, Mamona Mushtaq, Azhar Abbas, Ali Muhammad Waryah, Zaheer Ul- Haq

Background: JAK2 mutation plays a clinically significant role in the pathogenesis of acute lymphoblastic leukemia (ALL) by enhancing its oncogenicity. The study aimed to characterize the molecular pathology and computational profile of the JAK2 mutation in an ALL cohort of Pakistani origin.

Methods: Ninety-three patients were enrolled in the current study. The disease diagnosis was confirmed via flow cytometry and karyotyping of bone marrow aspirate/blood. For the identification of causative gene variations and assessment of their potential impact, the JAK2 gene underwent direct sequencing and predictive computational and in silico structural analysis, respectively.

Results: JAK2 mutations were detected in 10 (11%) patients. All mutations were missense with 1 being frameshift. Most mutations showed a similar pattern to the wild type but p.N673H+p.V674L+p.C675W (AAD699), p.V674F (AAD704), and p.V674L (AAD705) exhibited statistically significant stability loss. The triple mutation displayed reduced stability both globally and locally.

Conclusion: The pattern of gene defects in JAK2 in the studied cohort showed a disruption in proper folding behavior, evident from increased gyration values, resulting in the hypothesis that these mutations may cause structural alterations in the JAK2 protein that lead to disease progression.

背景:JAK2突变可增强急性淋巴细胞白血病(ALL)的致癌能力,因此在临床上对其发病机制起着重要作用。本研究旨在描述巴基斯坦籍ALL队列中JAK2突变的分子病理学和计算特征:本研究共纳入 93 例患者。方法:本次研究共纳入 93 名患者,通过流式细胞术和骨髓抽吸物/血液的核型分析确诊疾病。为确定致病基因变异并评估其潜在影响,分别对 JAK2 基因进行了直接测序和预测性计算及硅学结构分析:结果:在10名(11%)患者中检测到了JAK2基因突变。所有突变均为错义突变,其中1个为框架转换突变。大多数突变显示出与野生型相似的模式,但p.N673H+p.V674L+p.C675W(AAD699)、p.V674F(AAD704)和p.V674L(AAD705)显示出统计学上显著的稳定性丧失。三重突变在整体和局部都显示出稳定性降低:结论:研究队列中的 JAK2 基因缺陷模式显示了正常折叠行为的破坏,这一点从回旋值的增加可以看出,因此假设这些突变可能会导致 JAK2 蛋白的结构改变,从而导致疾病进展。
{"title":"Molecular pathology and computational profiling of Janus kinase 2 (JAK2) mutation in acute lymphoblastic leukemia: insights from a Pakistani cohort.","authors":"Sidra Maqsood, Saqib Hussain Ansari, Mamona Mushtaq, Azhar Abbas, Ali Muhammad Waryah, Zaheer Ul- Haq","doi":"10.1093/labmed/lmae071","DOIUrl":"https://doi.org/10.1093/labmed/lmae071","url":null,"abstract":"<p><strong>Background: </strong>JAK2 mutation plays a clinically significant role in the pathogenesis of acute lymphoblastic leukemia (ALL) by enhancing its oncogenicity. The study aimed to characterize the molecular pathology and computational profile of the JAK2 mutation in an ALL cohort of Pakistani origin.</p><p><strong>Methods: </strong>Ninety-three patients were enrolled in the current study. The disease diagnosis was confirmed via flow cytometry and karyotyping of bone marrow aspirate/blood. For the identification of causative gene variations and assessment of their potential impact, the JAK2 gene underwent direct sequencing and predictive computational and in silico structural analysis, respectively.</p><p><strong>Results: </strong>JAK2 mutations were detected in 10 (11%) patients. All mutations were missense with 1 being frameshift. Most mutations showed a similar pattern to the wild type but p.N673H+p.V674L+p.C675W (AAD699), p.V674F (AAD704), and p.V674L (AAD705) exhibited statistically significant stability loss. The triple mutation displayed reduced stability both globally and locally.</p><p><strong>Conclusion: </strong>The pattern of gene defects in JAK2 in the studied cohort showed a disruption in proper folding behavior, evident from increased gyration values, resulting in the hypothesis that these mutations may cause structural alterations in the JAK2 protein that lead to disease progression.</p>","PeriodicalId":94124,"journal":{"name":"Laboratory medicine","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142006205","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of biomarkers associated with pathological tumor staging and their utility in the diagnosis and prognosis of prostate cancer. 鉴定与病理肿瘤分期相关的生物标志物及其在前列腺癌诊断和预后中的应用。
Pub Date : 2024-08-14 DOI: 10.1093/labmed/lmae059
Shiquan Xu, He Shi, Yiran Liu, Jing Lin, Xia Wu, Ruichun Lu, Yu Fan, Weiqiang Tan

Objective: Pathological tumor (pT) staging plays a crucial role in prostate cancer (PCa) diagnosis. This study aimed to identify pT stage-associated biomarkers and explored their utility in PCa prognosis.

Methods: GSE69223 was used to identify potential targets differentially expressed between level 2 of pT staging (pT2) and level 3 of pT staging (pT3). Quantitative reverse transcriptase-polymerase chain reaction and immunohistochemistry were performed on tissues from patients with PCa to screen the pT stage-associated targets and to explore the prognostic value of these targets in PCa.

Results: CENPI and SLC38A11 were most significantly upregulated, whereas ANO6 and KANK2 were mostly decreased in pT3 tumors compared with pT2 staging. ANO6 levels were negatively associated with preoperative prostate-specific antigen (PSA) levels, lymph node staging (N staging), Gleason score, and overall survival (OS); CENPI was positively associated with preoperative PSA levels, N staging, and OS, but was not associated with the Gleason score; SLC38A11 and KANK2 were not associated with OS. ANO6 and KANK2 were correlated with neutrophil markers, whereas CENPI was correlated with macrophage M2 types.

Conclusion: We identified 4 reliable PCa biomarkers associated with pT staging that would be valuable for diagnosing and determining PCa prognosis.

目的:肿瘤病理(pT)分期在前列腺癌(PCa)诊断中起着至关重要的作用。本研究旨在确定与 pT 分期相关的生物标志物,并探讨它们在 PCa 预后中的作用:方法:使用 GSE69223 来识别在 pT 分期 2 级(pT2)和 pT 分期 3 级(pT3)之间表达不同的潜在靶标。对 PCa 患者的组织进行定量反转录聚合酶链反应和免疫组化,以筛选 pT 分期相关靶点,并探讨这些靶点在 PCa 中的预后价值:结果发现:与pT2分期相比,CENPI和SLC38A11在pT3肿瘤中明显上调,而ANO6和KANK2则主要下降。ANO6水平与术前前列腺特异性抗原(PSA)水平、淋巴结分期(N分期)、Gleason评分和总生存率(OS)呈负相关;CENPI与术前PSA水平、N分期和OS呈正相关,但与Gleason评分无关;SLC38A11和KANK2与OS无关。ANO6和KANK2与中性粒细胞标志物相关,而CENPI与巨噬细胞M2类型相关:我们发现了与 pT 分期相关的 4 个可靠的 PCa 生物标志物,它们对诊断和确定 PCa 预后很有价值。
{"title":"Identification of biomarkers associated with pathological tumor staging and their utility in the diagnosis and prognosis of prostate cancer.","authors":"Shiquan Xu, He Shi, Yiran Liu, Jing Lin, Xia Wu, Ruichun Lu, Yu Fan, Weiqiang Tan","doi":"10.1093/labmed/lmae059","DOIUrl":"https://doi.org/10.1093/labmed/lmae059","url":null,"abstract":"<p><strong>Objective: </strong>Pathological tumor (pT) staging plays a crucial role in prostate cancer (PCa) diagnosis. This study aimed to identify pT stage-associated biomarkers and explored their utility in PCa prognosis.</p><p><strong>Methods: </strong>GSE69223 was used to identify potential targets differentially expressed between level 2 of pT staging (pT2) and level 3 of pT staging (pT3). Quantitative reverse transcriptase-polymerase chain reaction and immunohistochemistry were performed on tissues from patients with PCa to screen the pT stage-associated targets and to explore the prognostic value of these targets in PCa.</p><p><strong>Results: </strong>CENPI and SLC38A11 were most significantly upregulated, whereas ANO6 and KANK2 were mostly decreased in pT3 tumors compared with pT2 staging. ANO6 levels were negatively associated with preoperative prostate-specific antigen (PSA) levels, lymph node staging (N staging), Gleason score, and overall survival (OS); CENPI was positively associated with preoperative PSA levels, N staging, and OS, but was not associated with the Gleason score; SLC38A11 and KANK2 were not associated with OS. ANO6 and KANK2 were correlated with neutrophil markers, whereas CENPI was correlated with macrophage M2 types.</p><p><strong>Conclusion: </strong>We identified 4 reliable PCa biomarkers associated with pT staging that would be valuable for diagnosing and determining PCa prognosis.</p>","PeriodicalId":94124,"journal":{"name":"Laboratory medicine","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141984261","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Analytical evaluation of the automated interleukin-6 assay on the Roche cobas e602 analyzer. 对罗氏 cobas e602 分析仪上的自动白细胞介素-6 分析法进行分析评估。
Pub Date : 2024-08-10 DOI: 10.1093/labmed/lmae064
Anastasia Gant Kanegusuku, Timothy Carll, Kiang-Teck J Yeo

Background: Interleukin-6 (IL-6) is a proinflammatory cytokine that is associated with many inflammatory diseases. This validation study evaluates the automated Roche Elecsys IL-6 electrochemiluminescent immunoassay that has been granted emergency use authorization by the US Food and Drug Administration.

Methods: The Elecsys IL-6 assay was evaluated for precision, linearity, interference (by hemoglobin, bilirubin, triglycerides, and biotin) and clinical performance was compared to the V-PLEX Human IL-6 immunoassay (Meso Scale Discovery), performed by a reference laboratory.

Results: The Elecsys IL-6 assay is precise (intra-assay <3% coefficient of variation [CV], interassay <5% CV), exhibits an analytical measurable range of 1.5-4790 pg/mL, and is tolerant of significant interferences (H < 2522, I <62, L<2101, biotin <50 ng/mL). Comparison with the V-PLEX assay revealed a 2.95 slope bias in patient samples evaluated for IL-6 concentration (n = 43, range = 1.5-1891 pg/mL, y = 2.95x - 32.7, r2 = 0.84). Bland-Altman analysis revealed an absolute mean bias of 152 pg/mL (SD = 254 pg/mL), or a mean percentage difference of 73%.

Conclusion: The Roche IL-6 assay showed good analytical performance. The large systematic bias compared with another reference method precludes using multiple methods to monitor IL-6 response. The random-access nature of an automated IL-6 assay on the Roche platform makes the test available on demand.

背景:白细胞介素-6(IL-6)是一种促炎细胞因子,与许多炎症性疾病相关。本验证研究对已获得美国食品药品管理局紧急使用授权的罗氏 Elecsys IL-6 电化学发光免疫分析仪进行了评估:对Elecsys IL-6测定的精密度、线性、干扰(血红蛋白、胆红素、甘油三酯和生物素的干扰)和临床表现进行了评估,并与参考实验室进行的V-PLEX人IL-6免疫测定(Meso Scale Discovery)进行了比较:结果:Elecsys IL-6 检测法是精确的(检测内结论):罗氏 IL-6 检测法显示出良好的分析性能。与另一种参考方法相比,该方法存在较大的系统性偏差,因此不能使用多种方法监测 IL-6 反应。罗氏平台上的全自动 IL-6 检测试剂盒的随机接入特性使该检测试剂盒可按需使用。
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引用次数: 0
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Laboratory medicine
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