首页 > 最新文献

Journal of pharmaceutical analysis最新文献

英文 中文
Label-free electrochemical aptasensing of cardiac cell secretomes in cell culture media for the evaluation of drug-induced myocardial injury. 细胞培养基中心肌细胞分泌体的无标记电化学适体感评价药物性心肌损伤。
IF 8.9 Pub Date : 2025-10-01 Epub Date: 2025-02-18 DOI: 10.1016/j.jpha.2025.101234
Zelin Yang, Xilin Chen, Mingang Liao, Feng Liao, Wen Chen, Qian Shao, Bing Liu, Duanping Sun

Cardiac troponin I (cTnI), a widely used biomarker for assessing cardiovascular risk, can provide a window for the evaluation of drug-induced myocardial injury. Label-free biosensors are promising candidates for detecting cell secretomes, since they do not require labor-intensive processes. In this work, a label-free electrochemical aptasensor is developed for in situ monitoring of cardiac cell secretomes in cell culture media based on target-induced strand displacement. The aptasensing system contains an aptamer-functionalized signal nanoprobe facing trimetallic metal-organic framework nanosheets and a gold nanoparticle-based detection working electrode modified with DNA nanotetrahedron-based complementary DNA for indirect target detection. The signal nanoprobes (termed CAHA) consisted of copper-based metal-organic frameworks, AuPt nanoparticles, horseradish peroxidase, and an aptamer. When the aptasensor is exposed to cardiac cell secretomes, cTnI competitively binds to the aptamer, resulting in the release of signal nanoprobes from the biorecognition interface and electrochemical signal changes. The aptasensor exhibited rapid response times, a low detection limit of 0.31 pg/mL, and a wide linear range of 0.001-100 ng/mL. We successfully used this aptasensor to measure cTnI concentrations among secreted cardiac markers during antitumor drug treatment. In general, aptasensors can be used to monitor a variety of cardiac biomarkers in the evaluation of cardiotoxicity.

心肌肌钙蛋白I (Cardiac troponin I, cTnI)是一种广泛用于评估心血管风险的生物标志物,可以为评估药物性心肌损伤提供一个窗口。无标签生物传感器是检测细胞分泌组的有希望的候选者,因为它们不需要劳动密集型的过程。在这项工作中,开发了一种基于靶诱导链位移的无标记电化学感应传感器,用于在细胞培养基中原位监测心肌细胞分泌体。该适体感应系统包括一个面向三金属金属有机框架纳米片的适体功能化信号纳米探针和一个以DNA纳米四面体互补DNA修饰的基于金纳米粒子的检测工作电极,用于间接靶检测。信号纳米探针(称为CAHA)由铜基金属有机框架、AuPt纳米颗粒、辣根过氧化物酶和适体组成。当适体传感器暴露于心脏细胞分泌组时,cTnI与适体竞争性结合,导致信号纳米探针从生物识别界面释放,电化学信号发生变化。该传感器具有响应时间快、检出限低(0.31 pg/mL)、线性范围宽(0.001 ~ 100 ng/mL)等特点。在抗肿瘤药物治疗过程中,我们成功地使用了这种适体传感器来测量分泌的心脏标记物中的cTnI浓度。一般来说,适体传感器可用于监测各种心脏生物标志物,以评估心脏毒性。
{"title":"Label-free electrochemical aptasensing of cardiac cell secretomes in cell culture media for the evaluation of drug-induced myocardial injury.","authors":"Zelin Yang, Xilin Chen, Mingang Liao, Feng Liao, Wen Chen, Qian Shao, Bing Liu, Duanping Sun","doi":"10.1016/j.jpha.2025.101234","DOIUrl":"10.1016/j.jpha.2025.101234","url":null,"abstract":"<p><p>Cardiac troponin I (cTnI), a widely used biomarker for assessing cardiovascular risk, can provide a window for the evaluation of drug-induced myocardial injury. Label-free biosensors are promising candidates for detecting cell secretomes, since they do not require labor-intensive processes. In this work, a label-free electrochemical aptasensor is developed for <i>in situ</i> monitoring of cardiac cell secretomes in cell culture media based on target-induced strand displacement. The aptasensing system contains an aptamer-functionalized signal nanoprobe facing trimetallic metal-organic framework nanosheets and a gold nanoparticle-based detection working electrode modified with DNA nanotetrahedron-based complementary DNA for indirect target detection. The signal nanoprobes (termed CAHA) consisted of copper-based metal-organic frameworks, AuPt nanoparticles, horseradish peroxidase, and an aptamer. When the aptasensor is exposed to cardiac cell secretomes, cTnI competitively binds to the aptamer, resulting in the release of signal nanoprobes from the biorecognition interface and electrochemical signal changes. The aptasensor exhibited rapid response times, a low detection limit of 0.31 pg/mL, and a wide linear range of 0.001-100 ng/mL. We successfully used this aptasensor to measure cTnI concentrations among secreted cardiac markers during antitumor drug treatment. In general, aptasensors can be used to monitor a variety of cardiac biomarkers in the evaluation of cardiotoxicity.</p>","PeriodicalId":94338,"journal":{"name":"Journal of pharmaceutical analysis","volume":"15 10","pages":"101234"},"PeriodicalIF":8.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12613016/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145544796","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Tumor cells targetable graphene oxide doped microneedle for synergistic photothermal-chemotherapy treatment of melanoma. 肿瘤细胞靶向氧化石墨烯掺杂微针用于黑色素瘤的协同光热化疗治疗。
IF 8.9 Pub Date : 2025-10-01 Epub Date: 2025-03-18 DOI: 10.1016/j.jpha.2025.101270
Zhiqiang Zhang, Junfang Ke, Yuxin Dai, Chenxi Fang, Yunfeng Dai, Chen Wang, Meitao Duan, Jungang Ren, Ming Chen, Chen Wang

Melanoma is characterized by high malignancy, ranking the third among skin malignancies, and is associated with lack of specific treatment options and poor prognosis. Therefore, the development of effective therapies for melanoma is imperative. A critical challenge in addressing subcutaneous disease lies in overcoming the skin barrier. In this study, we engineered a microneedle (MN) system that integrates chemotherapy, photothermal therapy (PTT), and targeted therapy to enhance anti-tumor efficacy while effectively penetrating the skin barrier. In vitro studies have demonstrated that the MN drug delivery system (DDS) can effectively penetrate the stratum corneum of the skin, deliver therapeutics to subcutaneous tumor sites, and establish a drug reservoir at these locations to exert anti-tumor effects. Cellular experiments indicated that the engineered PTT chemotherapy-targeted MNs can be internalized by tumor cells, exhibiting enhanced cytotoxicity against them. In vivo pharmacological investigations revealed that the combination of PTT and chemotherapy delivered via this MN DDS produced synergistic anti-tumor effects, achieving a tumor inhibition rate of up to 98.15%. This in situ DDS minimizes involvement with other organs, significantly reducing chemotherapy-related side effects. In summary, the PTT chemotherapy-targeted MNs developed in this study demonstrate promising application potential by enhancing anti-tumor efficacy while minimizing adverse effects.

黑色素瘤的特点是恶性程度高,在皮肤恶性肿瘤中排名第三,缺乏特异性治疗选择和预后差。因此,开发有效的黑色素瘤治疗方法势在必行。解决皮下疾病的一个关键挑战在于克服皮肤屏障。在这项研究中,我们设计了一种微针(MN)系统,该系统集化疗、光热治疗(PTT)和靶向治疗于一体,在有效穿透皮肤屏障的同时提高抗肿瘤疗效。体外研究表明,MN给药系统(DDS)可以有效穿透皮肤角质层,将药物递送到皮下肿瘤部位,并在这些部位建立药物库,发挥抗肿瘤作用。细胞实验表明,PTT化疗靶向MNs可以被肿瘤细胞内化,并表现出增强的细胞毒性。体内药理学研究表明,PTT联合经该MN DDS给药的化疗具有协同抗肿瘤作用,肿瘤抑制率高达98.15%。这种原位DDS最大限度地减少了对其他器官的累及,显著减少了化疗相关的副作用。综上所述,本研究开发的PTT化疗靶向MNs在提高抗肿瘤疗效的同时将不良反应降至最低,具有广阔的应用前景。
{"title":"Tumor cells targetable graphene oxide doped microneedle for synergistic photothermal-chemotherapy treatment of melanoma.","authors":"Zhiqiang Zhang, Junfang Ke, Yuxin Dai, Chenxi Fang, Yunfeng Dai, Chen Wang, Meitao Duan, Jungang Ren, Ming Chen, Chen Wang","doi":"10.1016/j.jpha.2025.101270","DOIUrl":"10.1016/j.jpha.2025.101270","url":null,"abstract":"<p><p>Melanoma is characterized by high malignancy, ranking the third among skin malignancies, and is associated with lack of specific treatment options and poor prognosis. Therefore, the development of effective therapies for melanoma is imperative. A critical challenge in addressing subcutaneous disease lies in overcoming the skin barrier. In this study, we engineered a microneedle (MN) system that integrates chemotherapy, photothermal therapy (PTT), and targeted therapy to enhance anti-tumor efficacy while effectively penetrating the skin barrier. <i>In vitro</i> studies have demonstrated that the MN drug delivery system (DDS) can effectively penetrate the stratum corneum of the skin, deliver therapeutics to subcutaneous tumor sites, and establish a drug reservoir at these locations to exert anti-tumor effects. Cellular experiments indicated that the engineered PTT chemotherapy-targeted MNs can be internalized by tumor cells, exhibiting enhanced cytotoxicity against them. <i>In vivo</i> pharmacological investigations revealed that the combination of PTT and chemotherapy delivered via this MN DDS produced synergistic anti-tumor effects, achieving a tumor inhibition rate of up to 98.15%. This <i>in situ</i> DDS minimizes involvement with other organs, significantly reducing chemotherapy-related side effects. In summary, the PTT chemotherapy-targeted MNs developed in this study demonstrate promising application potential by enhancing anti-tumor efficacy while minimizing adverse effects.</p>","PeriodicalId":94338,"journal":{"name":"Journal of pharmaceutical analysis","volume":"15 10","pages":"101270"},"PeriodicalIF":8.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12616066/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145544842","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prrx1 promotes mesangial cell proliferation and kidney fibrosis through YAP in diabetic nephropathy. Prrx1通过YAP促进糖尿病肾病肾系膜细胞增殖和肾纤维化。
IF 8.9 Pub Date : 2025-10-01 Epub Date: 2025-02-28 DOI: 10.1016/j.jpha.2025.101247
Liu Xu, Jiasen Shi, Huan Li, Yunfei Liu, Jingyi Wang, Xizhi Li, Dongxue Ren, Sijie Liu, Heng Wang, Yinfei Lu, Jinfang Song, Lei Du, Qian Lu, Xiaoxing Yin

Mesangial cell proliferation is an early pathological indicator of diabetic nephropathy (DN). Growing evidence highlights the pivotal role of paired-related homeobox 1 (Prrx1), a key regulator of cellular proliferation and tissue differentiation, in various disease pathogenesis. Notably, Prrx1 is highly expressed in mesangial cells under DN conditions. Both in vitro and in vivo studies have demonstrated that Prrx1 overexpression promotes mesangial cell proliferation and contributes to renal fibrosis in db/m mice. Conversely, Prrx1 knockdown markedly suppresses hyperglycemia-induced mesangial cell proliferation and mitigates renal fibrosis in db/db mice. Mechanistically, Prrx1 directly interacts with the Yes-associated protein 1 (YAP) promoter, leading to the upregulation of YAP expression. This upregulation promotes mesangial cell proliferation and exacerbates renal fibrosis. These findings emphasize the crucial role of Prrx1 upregulation in high glucose-induced mesangial cell proliferation, ultimately leading to renal fibrosis in DN. Therefore, targeting Prrx1 to downregulate its expression presents a promising therapeutic strategy for treating renal fibrosis associated with DN.

系膜细胞增生是糖尿病肾病(DN)的早期病理指标。越来越多的证据强调了配对相关同源盒1 (Prrx1)在多种疾病发病机制中的关键作用,它是细胞增殖和组织分化的关键调节因子。值得注意的是,在DN条件下,Prrx1在系膜细胞中高度表达。体外和体内研究均表明,Prrx1过表达可促进db/m小鼠肾系膜细胞增殖并导致肾纤维化。相反,Prrx1基因敲低可显著抑制高血糖诱导的肾系膜细胞增殖,减轻db/db小鼠肾纤维化。在机制上,Prrx1直接与yes相关蛋白1 (YAP)启动子相互作用,导致YAP表达上调。这种上调促进肾系膜细胞增殖,加重肾纤维化。这些发现强调了Prrx1上调在高糖诱导的肾小球系膜细胞增殖中的关键作用,最终导致肾病肾纤维化。因此,靶向Prrx1下调其表达为治疗DN相关肾纤维化提供了一种很有前景的治疗策略。
{"title":"Prrx1 promotes mesangial cell proliferation and kidney fibrosis through YAP in diabetic nephropathy.","authors":"Liu Xu, Jiasen Shi, Huan Li, Yunfei Liu, Jingyi Wang, Xizhi Li, Dongxue Ren, Sijie Liu, Heng Wang, Yinfei Lu, Jinfang Song, Lei Du, Qian Lu, Xiaoxing Yin","doi":"10.1016/j.jpha.2025.101247","DOIUrl":"10.1016/j.jpha.2025.101247","url":null,"abstract":"<p><p>Mesangial cell proliferation is an early pathological indicator of diabetic nephropathy (DN). Growing evidence highlights the pivotal role of paired-related homeobox 1 (Prrx1), a key regulator of cellular proliferation and tissue differentiation, in various disease pathogenesis. Notably, Prrx1 is highly expressed in mesangial cells under DN conditions. Both <i>in vitro</i> and <i>in vivo</i> studies have demonstrated that Prrx1 overexpression promotes mesangial cell proliferation and contributes to renal fibrosis in <i>db/m</i> mice. Conversely, Prrx1 knockdown markedly suppresses hyperglycemia-induced mesangial cell proliferation and mitigates renal fibrosis in <i>db/db</i> mice. Mechanistically, Prrx1 directly interacts with the Yes-associated protein 1 (YAP) promoter, leading to the upregulation of YAP expression. This upregulation promotes mesangial cell proliferation and exacerbates renal fibrosis. These findings emphasize the crucial role of Prrx1 upregulation in high glucose-induced mesangial cell proliferation, ultimately leading to renal fibrosis in DN. Therefore, targeting Prrx1 to downregulate its expression presents a promising therapeutic strategy for treating renal fibrosis associated with DN.</p>","PeriodicalId":94338,"journal":{"name":"Journal of pharmaceutical analysis","volume":"15 10","pages":"101247"},"PeriodicalIF":8.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12637227/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145591030","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The role of genetics and epigenetics in breast cancer: A comprehensive review of metastasis, risk factors, and future perspectives. 遗传学和表观遗传学在乳腺癌中的作用:转移、危险因素和未来展望的综合综述。
IF 8.9 Pub Date : 2025-10-01 Epub Date: 2025-03-14 DOI: 10.1016/j.jpha.2025.101268
Yimeng Chai, Yao Shi

This literature review investigates the mechanisms of resistance to human epidermal growth factor receptor 2 (HER2)-targeted therapies in HER2+ breast cancer, a subtype that accounts for approximately 20% of breast cancer cases. Despite the effectiveness of treatments such as trastuzumab and lapatinib, many patients experience either primary or acquired resistance, leading to treatment failure. The review systematically categorizes various resistance mechanisms, including the role of receptor activator of nuclear factor kappaΒ (RANK) expression, which has been shown to activate the nuclear factor kappaB (NF-κB) pathway, promoting cell survival and contributing to resistance. Other mechanisms include the activation of alternative signaling pathways, such as the phosphatidylinositol 3-kinase (PI3K)/protein kinase B (AKT) pathway, and the involvement of tumor-associated fibroblasts, which can drive resistance through receptor tyrosine kinase (RTK) activation. Additionally, the review highlights the importance of understanding these mechanisms to inform the development of novel therapeutic strategies. By identifying potential biomarkers and therapeutic targets, the review suggests that combining HER2 inhibitors with agents that target resistance pathways may enhance treatment efficacy and improve patient outcomes. Overall, this review underscores the complexity of HER2+ breast cancer treatment and the need for continued research to overcome resistance challenges.

这篇文献综述探讨了HER2+型乳腺癌对人表皮生长因子受体2 (HER2)靶向治疗的耐药机制,HER2+型乳腺癌约占乳腺癌病例的20%。尽管曲妥珠单抗和拉帕替尼等治疗方法有效,但许多患者经历了原发性或获得性耐药,导致治疗失败。本文对多种耐药机制进行了系统分类,包括核因子kappaΒ受体激活因子(receptor activator of nuclear factor, RANK)表达的作用,RANK已被证明可激活核因子κ b (NF-κB)通路,促进细胞存活并促进耐药。其他机制包括替代信号通路的激活,如磷脂酰肌醇3-激酶(PI3K)/蛋白激酶B (AKT)通路,以及肿瘤相关成纤维细胞的参与,它们可以通过受体酪氨酸激酶(RTK)激活来驱动耐药性。此外,该综述强调了了解这些机制对开发新的治疗策略的重要性。通过鉴定潜在的生物标志物和治疗靶点,该综述表明HER2抑制剂与靶向耐药途径的药物联合使用可能提高治疗效果并改善患者预后。总的来说,这篇综述强调了HER2+乳腺癌治疗的复杂性和继续研究以克服耐药挑战的必要性。
{"title":"The role of genetics and epigenetics in breast cancer: A comprehensive review of metastasis, risk factors, and future perspectives.","authors":"Yimeng Chai, Yao Shi","doi":"10.1016/j.jpha.2025.101268","DOIUrl":"10.1016/j.jpha.2025.101268","url":null,"abstract":"<p><p>This literature review investigates the mechanisms of resistance to human epidermal growth factor receptor 2 (HER2)-targeted therapies in HER2<sup>+</sup> breast cancer, a subtype that accounts for approximately 20% of breast cancer cases. Despite the effectiveness of treatments such as trastuzumab and lapatinib, many patients experience either primary or acquired resistance, leading to treatment failure. The review systematically categorizes various resistance mechanisms, including the role of receptor activator of nuclear factor kappaΒ (RANK) expression, which has been shown to activate the nuclear factor kappaB (NF-κB) pathway, promoting cell survival and contributing to resistance. Other mechanisms include the activation of alternative signaling pathways, such as the phosphatidylinositol 3-kinase (PI3K)/protein kinase B (AKT) pathway, and the involvement of tumor-associated fibroblasts, which can drive resistance through receptor tyrosine kinase (RTK) activation. Additionally, the review highlights the importance of understanding these mechanisms to inform the development of novel therapeutic strategies. By identifying potential biomarkers and therapeutic targets, the review suggests that combining HER2 inhibitors with agents that target resistance pathways may enhance treatment efficacy and improve patient outcomes. Overall, this review underscores the complexity of HER2<sup>+</sup> breast cancer treatment and the need for continued research to overcome resistance challenges.</p>","PeriodicalId":94338,"journal":{"name":"Journal of pharmaceutical analysis","volume":"15 10","pages":"101268"},"PeriodicalIF":8.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12555786/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145396116","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fast-adapting graph neural network with prior knowledge for drug response prediction across preclinical and clinical data. 快速适应图形神经网络与先验知识的药物反应预测跨临床前和临床数据。
IF 8.9 Pub Date : 2025-10-01 Epub Date: 2025-07-04 DOI: 10.1016/j.jpha.2025.101386
Hui Guo, Xiang Lv, Shenghao Li, Daichuan Ma, Yizhou Li, Menglong Li

Efficient drug response prediction is crucial for reducing drug development costs and time, but current computational models struggle with limited experimental data and out-of-distribution issues between in vitro and in vivo settings. To address this, we introduced drug response prediction meta-learner (metaDRP), a novel few-shot learning model designed to enhance predictive accuracy with limited sample sizes across diverse drug-tissue tasks. metaDRP achieves performance comparable to state-of-the-art models in both genomics of drug sensitivity in cancer (GDSC) drug screening and in vivo datasets, while effectively mitigating out-of-distribution problems, making it reliable for translating findings from controlled environments to clinical applications. Additionally, metaDRP's inherent interpretability offers reliable insights into drug mechanisms of action, such as elucidating the pathways and molecular targets of drugs like epothilone B and pemetrexed. This work provides a promising approach to overcoming data scarcity and out-of-distribution challenges in drug response prediction, while promoting the integration of few-shot learning in this field.

有效的药物反应预测对于降低药物开发成本和时间至关重要,但目前的计算模型与有限的实验数据和体外和体内设置之间的不分布问题相斗争。为了解决这个问题,我们引入了药物反应预测元学习器(metaDRP),这是一种新颖的少量学习模型,旨在提高不同药物组织任务在有限样本量下的预测准确性。metaDRP在癌症药物敏感性基因组学(GDSC)药物筛选和体内数据集方面实现了与最先进模型相当的性能,同时有效地缓解了分布外问题,使其能够可靠地将受控环境中的发现转化为临床应用。此外,metaDRP固有的可解释性为药物作用机制提供了可靠的见解,例如阐明了艾美替龙B和培美曲塞等药物的途径和分子靶点。这项工作为克服药物反应预测中的数据稀缺性和分布外挑战提供了一种有希望的方法,同时促进了该领域中少射学习的整合。
{"title":"Fast-adapting graph neural network with prior knowledge for drug response prediction across preclinical and clinical data.","authors":"Hui Guo, Xiang Lv, Shenghao Li, Daichuan Ma, Yizhou Li, Menglong Li","doi":"10.1016/j.jpha.2025.101386","DOIUrl":"10.1016/j.jpha.2025.101386","url":null,"abstract":"<p><p>Efficient drug response prediction is crucial for reducing drug development costs and time, but current computational models struggle with limited experimental data and out-of-distribution issues between <i>in vitro</i> and <i>in vivo</i> settings. To address this, we introduced drug response prediction meta-learner (metaDRP), a novel few-shot learning model designed to enhance predictive accuracy with limited sample sizes across diverse drug-tissue tasks. metaDRP achieves performance comparable to state-of-the-art models in both genomics of drug sensitivity in cancer (GDSC) drug screening and <i>in vivo</i> datasets, while effectively mitigating out-of-distribution problems, making it reliable for translating findings from controlled environments to clinical applications. Additionally, metaDRP's inherent interpretability offers reliable insights into drug mechanisms of action, such as elucidating the pathways and molecular targets of drugs like epothilone B and pemetrexed. This work provides a promising approach to overcoming data scarcity and out-of-distribution challenges in drug response prediction, while promoting the integration of few-shot learning in this field.</p>","PeriodicalId":94338,"journal":{"name":"Journal of pharmaceutical analysis","volume":"15 10","pages":"101386"},"PeriodicalIF":8.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12613006/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145544851","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ginsenoside CK potentiates SIRT1 to alleviate lupus nephritis through compensating for XBP1-mediated endoplasmic reticulum stress in plasma cells. 人参皂苷CK通过补偿xbp1介导的浆细胞内质网应激,增强SIRT1缓解狼疮性肾炎。
IF 8.9 Pub Date : 2025-10-01 Epub Date: 2025-02-27 DOI: 10.1016/j.jpha.2025.101245
Ziyu Song, Ying Li, Sumei Xu, Shuowen Qian, Wangda Xu, Li Xu, Fengyuan Tian

Immune complex deposition is a critical factor in early renal damage associated with lupus nephritis (LN), and targeting plasma cell aggregation offers a promising therapeutic strategy. Ginsenoside compound K (i.e., 20-O-β-d-glucopyranosyl-20(S)-protopanaxadiol) (CK), a derivative of ginsenoside, has indicated significant potential in alleviating renal damage in lupus-prone mice, potentially by modulating B cell dynamics in response to endoplasmic reticulum (ER) stress. In this study, CK (20 or 40 mg/kg) was orally administered to female MRL/lpr mice for 10 weeks. The effects of CK on B cell subpopulations, renal function, and histopathological changes were evaluated. Single-cell ribonucleic acid sequencing was employed to analyze gene expression profile and pseudotime trajectories during B cell-mediated renal injury. Additionally, in vitro B cell assays were conducted to explore the role of the sirtuin-1 (SIRT1)-X-box binding protein 1 (XBP1) axis in ER stress. Our findings demonstrated that CK effectively reduced anti-double stranded DNA (dsDNA) antibody levels, alleviated systemic inflammation, improved renal function, and facilitated the clearance of deposited immune complexes. CK likely suppressed the unfolded protein response (UPR), delaying the differentiation of renal-activated B cells into plasma cells. It promoted B cell-specific SIRT1 activation and inhibited the splicing of XBP1 into its active form, XBP1s. CK also restored ER morphology by interacting with calmodulin (CALM) to maintain ER calcium storage, reinforcing SIRT1 functional integrity and promoting XBP1 deacetylation, thereby limiting plasma cell differentiation. In conclusion, CK mitigates plasma cell accumulation in the renal microenvironment by preventing SIRT1-mediated XBP1 splicing, offering a potential therapeutic approach for LN.

免疫复合物沉积是狼疮性肾炎(LN)相关早期肾损害的关键因素,靶向浆细胞聚集提供了一种很有前景的治疗策略。人参皂苷化合物K(即20-O-β-d- glucopyranoyl -20(S)-protopanaxadiol) (CK)是人参皂苷的衍生物,已显示出减轻狼疮易感小鼠肾损伤的显著潜力,可能是通过调节内质网(ER)应激反应中的B细胞动力学。在本研究中,雌性MRL/lpr小鼠口服CK(20或40 mg/kg) 10周。评估了CK对B细胞亚群、肾功能和组织病理学改变的影响。采用单细胞核糖核酸测序分析基因表达谱和假时间轨迹在B细胞介导的肾损伤。此外,我们还通过体外B细胞实验探讨了sirtuin-1 (SIRT1)-X-box结合蛋白1 (XBP1)轴在内质网应激中的作用。我们的研究结果表明,CK有效地降低了抗双链DNA (dsDNA)抗体水平,减轻了全身炎症,改善了肾功能,促进了沉积的免疫复合物的清除。CK可能抑制未折叠蛋白反应(UPR),延缓肾活化B细胞向浆细胞的分化。它促进了B细胞特异性SIRT1的激活,并抑制了XBP1剪接成其活性形式XBP1。CK还通过与钙调蛋白(calmodulin, CALM)相互作用,维持内质网钙储存,增强SIRT1功能完整性,促进XBP1去乙酰化,从而限制浆细胞分化,从而恢复内质网形态。总之,CK通过阻止sirt1介导的XBP1剪接来减轻肾微环境中的浆细胞积聚,为LN提供了一种潜在的治疗方法。
{"title":"Ginsenoside CK potentiates SIRT1 to alleviate lupus nephritis through compensating for XBP1-mediated endoplasmic reticulum stress in plasma cells.","authors":"Ziyu Song, Ying Li, Sumei Xu, Shuowen Qian, Wangda Xu, Li Xu, Fengyuan Tian","doi":"10.1016/j.jpha.2025.101245","DOIUrl":"10.1016/j.jpha.2025.101245","url":null,"abstract":"<p><p>Immune complex deposition is a critical factor in early renal damage associated with lupus nephritis (LN), and targeting plasma cell aggregation offers a promising therapeutic strategy. Ginsenoside compound K (i.e., 20-<i>O</i>-β-d-glucopyranosyl-20(<i>S</i>)-protopanaxadiol) (CK), a derivative of ginsenoside, has indicated significant potential in alleviating renal damage in lupus-prone mice, potentially by modulating B cell dynamics in response to endoplasmic reticulum (ER) stress. In this study, CK (20 or 40 mg/kg) was orally administered to female MRL/<i>lpr</i> mice for 10 weeks. The effects of CK on B cell subpopulations, renal function, and histopathological changes were evaluated. Single-cell ribonucleic acid sequencing was employed to analyze gene expression profile and pseudotime trajectories during B cell-mediated renal injury. Additionally, <i>in vitro</i> B cell assays were conducted to explore the role of the sirtuin-1 (SIRT1)-X-box binding protein 1 (XBP1) axis in ER stress. Our findings demonstrated that CK effectively reduced anti-double stranded DNA (dsDNA) antibody levels, alleviated systemic inflammation, improved renal function, and facilitated the clearance of deposited immune complexes. CK likely suppressed the unfolded protein response (UPR), delaying the differentiation of renal-activated B cells into plasma cells. It promoted B cell-specific SIRT1 activation and inhibited the splicing of XBP1 into its active form, XBP1s. CK also restored ER morphology by interacting with calmodulin (CALM) to maintain ER calcium storage, reinforcing SIRT1 functional integrity and promoting XBP1 deacetylation, thereby limiting plasma cell differentiation. In conclusion, CK mitigates plasma cell accumulation in the renal microenvironment by preventing SIRT1-mediated XBP1 splicing, offering a potential therapeutic approach for LN.</p>","PeriodicalId":94338,"journal":{"name":"Journal of pharmaceutical analysis","volume":"15 10","pages":"101245"},"PeriodicalIF":8.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12637197/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145590898","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
DHGT-DTI: Advancing drug-target interaction prediction through a dual-view heterogeneous network with GraphSAGE and Graph Transformer. DHGT-DTI:通过GraphSAGE和Graph Transformer的双视图异构网络推进药物-靶标相互作用预测。
IF 8.9 Pub Date : 2025-10-01 Epub Date: 2025-05-09 DOI: 10.1016/j.jpha.2025.101336
Mengdi Wang, Xiujuan Lei, Ling Guo, Ming Chen, Yi Pan

Computational approaches for predicting drug-target interactions (DTIs) are pivotal in advancing drug discovery. Current methodologies leveraging heterogeneous networks often fall short in fully integrating both local and global network information. To comprehensively consider network information, we propose DHGT-DTI, a novel deep learning-based approach for DTI prediction. Specifically, we capture the local and global structural information of the network from both neighborhood and meta-path perspectives. In the neighborhood perspective, we employ a heterogeneous graph neural network (HGNN), which extends Graph Sample and Aggregate (GraphSAGE) to handle diverse node and edge types, effectively learning local network structures. In the meta-path perspective, we introduce a Graph Transformer with residual connections to model higher-order relationships defined by meta-paths, such as "drug-disease-drug", and use an attention mechanism to fuse information across multiple meta-paths. The learned features from these dual perspectives are synergistically integrated for DTI prediction via a matrix decomposition method. Furthermore, DHGT-DTI reconstructs not only the DTI network but also auxiliary networks to bolster prediction accuracy. Comprehensive experiments on two benchmark datasets validate the superiority of DHGT-DTI over existing baseline methods. Additionally, case studies on six drugs used to treat Parkinson's disease not only validate the practical utility of DHGT-DTI but also highlight its broader potential in accelerating drug discovery for other diseases.

预测药物-靶标相互作用(dti)的计算方法是推进药物发现的关键。目前利用异构网络的方法往往不能充分集成本地和全球网络信息。为了综合考虑网络信息,我们提出了一种新的基于深度学习的DTI预测方法DHGT-DTI。具体来说,我们从邻域和元路径的角度捕获了网络的局部和全局结构信息。在邻域的角度,我们采用异构图神经网络(HGNN),它扩展了图样本和聚合(GraphSAGE)来处理不同的节点和边缘类型,有效地学习局部网络结构。从元路径的角度来看,我们引入了一个带有残余连接的Graph Transformer来建模由元路径定义的高阶关系,例如“药物-疾病-药物”,并使用注意机制来融合跨多个元路径的信息。从这两个角度学习的特征通过矩阵分解方法协同集成用于DTI预测。此外,DHGT-DTI不仅重建DTI网络,还重建辅助网络以提高预测精度。在两个基准数据集上的综合实验验证了DHGT-DTI相对于现有基准方法的优越性。此外,用于治疗帕金森病的六种药物的案例研究不仅验证了DHGT-DTI的实际效用,而且强调了其在加速其他疾病药物发现方面的更广泛潜力。
{"title":"DHGT-DTI: Advancing drug-target interaction prediction through a dual-view heterogeneous network with GraphSAGE and Graph Transformer.","authors":"Mengdi Wang, Xiujuan Lei, Ling Guo, Ming Chen, Yi Pan","doi":"10.1016/j.jpha.2025.101336","DOIUrl":"10.1016/j.jpha.2025.101336","url":null,"abstract":"<p><p>Computational approaches for predicting drug-target interactions (DTIs) are pivotal in advancing drug discovery. Current methodologies leveraging heterogeneous networks often fall short in fully integrating both local and global network information. To comprehensively consider network information, we propose DHGT-DTI, a novel deep learning-based approach for DTI prediction. Specifically, we capture the local and global structural information of the network from both neighborhood and meta-path perspectives. In the neighborhood perspective, we employ a heterogeneous graph neural network (HGNN), which extends Graph Sample and Aggregate (GraphSAGE) to handle diverse node and edge types, effectively learning local network structures. In the meta-path perspective, we introduce a Graph Transformer with residual connections to model higher-order relationships defined by meta-paths, such as \"drug-disease-drug\", and use an attention mechanism to fuse information across multiple meta-paths. The learned features from these dual perspectives are synergistically integrated for DTI prediction via a matrix decomposition method. Furthermore, DHGT-DTI reconstructs not only the DTI network but also auxiliary networks to bolster prediction accuracy. Comprehensive experiments on two benchmark datasets validate the superiority of DHGT-DTI over existing baseline methods. Additionally, case studies on six drugs used to treat Parkinson's disease not only validate the practical utility of DHGT-DTI but also highlight its broader potential in accelerating drug discovery for other diseases.</p>","PeriodicalId":94338,"journal":{"name":"Journal of pharmaceutical analysis","volume":"15 10","pages":"101336"},"PeriodicalIF":8.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12616060/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145544837","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A high throughput strategy for traditional Chinese medicine active compound screening based on Raman spectroscopy. 基于拉曼光谱的中药活性化合物高通量筛选策略
IF 8.9 Pub Date : 2025-10-01 Epub Date: 2025-05-08 DOI: 10.1016/j.jpha.2025.101334
Mengyin Tian, Xiaobo Ma, Yuandong Li, Hengchang Zang, Lian Li

Image 1.

图片1。
{"title":"A high throughput strategy for traditional Chinese medicine active compound screening based on Raman spectroscopy.","authors":"Mengyin Tian, Xiaobo Ma, Yuandong Li, Hengchang Zang, Lian Li","doi":"10.1016/j.jpha.2025.101334","DOIUrl":"10.1016/j.jpha.2025.101334","url":null,"abstract":"<p><p>Image 1.</p>","PeriodicalId":94338,"journal":{"name":"Journal of pharmaceutical analysis","volume":"15 10","pages":"101334"},"PeriodicalIF":8.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12593535/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145484567","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metformin alleviates renal tubular injury in diabetic kidney disease by activating mitophagy and inhibiting ferroptosis via HIF-1α/MIOX axis. 二甲双胍通过HIF-1α/MIOX轴激活线粒体自噬,抑制铁凋亡,减轻糖尿病肾病肾小管损伤。
IF 8.9 Pub Date : 2025-10-01 Epub Date: 2025-03-26 DOI: 10.1016/j.jpha.2025.101284
Qinrui Wu, Yanyan Zhao, Fengjuan Huang

Renal tubular injury has emerged as a critical factor in the progression of diabetic kidney disease (DKD). Given renal tubules' high mitochondrial density and susceptibility to mitochondrial dysregulation and ferroptosis, targeting these pathways could offer therapeutic potential. Metformin (MET), a first-line therapy for type 2 diabetes mellitus (T2DM), exerts reno-protective effects by improving mitochondrial function and attenuating fibrosis; however, its role in regulating ferroptosis in DKD remains unclear. This study aimed to investigate the role of MET in modulating mitophagy and ferroptosis in diabetic kidneys. In diabetic mouse models, MET notably alleviated tubular injury by promoting mitophagy and reducing ferroptosis, as shown by increasing levels of phosphatase and tensin homolog (PTEN)-induced putative kinase 1 (PINK1) and Parkin, while decreased levels of malondialdehyde (MDA) and iron content. Mechanistically, MET downregulated the hypoxia-inducible factor-1alpha (HIF-1α)/myo-inositol oxygenase (MIOX) signaling axis in renal tubular epithelial cells (RTECs), thereby restoring mitophagy and inhibiting ferroptosis. These findings demonstrate that MET mitigates diabetic renal injury by promoting mitophagy and countering ferroptosis via suppressing the HIF-1α/MIOX pathway, highlighting its potential as a therapeutic intervention for halting DKD progression.

肾小管损伤已成为糖尿病肾病(DKD)进展的关键因素。鉴于肾小管的高线粒体密度和对线粒体失调和铁下垂的易感,靶向这些途径可能具有治疗潜力。二甲双胍(Metformin, MET)是治疗2型糖尿病(T2DM)的一线药物,通过改善线粒体功能和减轻纤维化发挥肾保护作用;然而,其在DKD中调节铁下垂的作用尚不清楚。本研究旨在探讨MET在糖尿病肾脏自噬和铁下垂中的作用。在糖尿病小鼠模型中,MET通过促进线粒体自噬和减少铁下垂来显著减轻小管损伤,其表现为增加磷酸酶和紧张素同源物(PTEN)诱导的推定激酶1 (PINK1)和Parkin的水平,同时降低丙二醛(MDA)和铁含量。在机制上,MET下调肾小管上皮细胞(RTECs)中的缺氧诱导因子-1α (HIF-1α)/肌醇加氧酶(MIOX)信号轴,从而恢复有丝分裂并抑制铁凋亡。这些发现表明MET通过抑制HIF-1α/MIOX途径促进线粒体自噬和对抗铁下垂来减轻糖尿病肾损伤,突出了其作为阻止DKD进展的治疗干预的潜力。
{"title":"Metformin alleviates renal tubular injury in diabetic kidney disease by activating mitophagy and inhibiting ferroptosis via HIF-1α/MIOX axis.","authors":"Qinrui Wu, Yanyan Zhao, Fengjuan Huang","doi":"10.1016/j.jpha.2025.101284","DOIUrl":"10.1016/j.jpha.2025.101284","url":null,"abstract":"<p><p>Renal tubular injury has emerged as a critical factor in the progression of diabetic kidney disease (DKD). Given renal tubules' high mitochondrial density and susceptibility to mitochondrial dysregulation and ferroptosis, targeting these pathways could offer therapeutic potential. Metformin (MET), a first-line therapy for type 2 diabetes mellitus (T2DM), exerts reno-protective effects by improving mitochondrial function and attenuating fibrosis; however, its role in regulating ferroptosis in DKD remains unclear. This study aimed to investigate the role of MET in modulating mitophagy and ferroptosis in diabetic kidneys. In diabetic mouse models, MET notably alleviated tubular injury by promoting mitophagy and reducing ferroptosis, as shown by increasing levels of phosphatase and tensin homolog (PTEN)-induced putative kinase 1 (PINK1) and Parkin, while decreased levels of malondialdehyde (MDA) and iron content. Mechanistically, MET downregulated the hypoxia-inducible factor-1alpha (HIF-1α)/myo-inositol oxygenase (MIOX) signaling axis in renal tubular epithelial cells (RTECs), thereby restoring mitophagy and inhibiting ferroptosis. These findings demonstrate that MET mitigates diabetic renal injury by promoting mitophagy and countering ferroptosis via suppressing the HIF-1α/MIOX pathway, highlighting its potential as a therapeutic intervention for halting DKD progression.</p>","PeriodicalId":94338,"journal":{"name":"Journal of pharmaceutical analysis","volume":"15 10","pages":"101284"},"PeriodicalIF":8.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12538102/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145351022","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Integrating biogravimetric analysis and machine learning for systematic studies of botanical materials: From bioactive constituent identification to production area prediction. 整合植物材料系统研究的生物重量分析和机器学习:从生物活性成分鉴定到生产区域预测。
IF 8.9 Pub Date : 2025-10-01 Epub Date: 2025-02-12 DOI: 10.1016/j.jpha.2025.101222
Sinan Wang, Huiru Xiang, Xinyuan Pan, Jianyang Pan, Lu Zhao, Yi Wang, Shaoqing Cui, Yu Tang

In general, bioassay-guided fractionation and isolation of bioactive constituents from botanical materials frequently ended up with the reward of a single compound. However, botanical materials typically exert their therapeutic actions through multi-pathway effects due to the intrinsic complex nature of chemical constituents. In addition, the content of bioactive compounds in botanical materials is largely dependent on humidity, temperature, soil, especially geographical origins, from which rapid and accurate identification of plant materials is pressingly needed. These long-standing obstacles collectively impede the deep exploitation and application of these versatile natural sources. To address the challenges, a new paradigm integrating biogravimetric analyses and machine learning-driven origin classification (BAMLOC) was developed. The biogravimetric analyses are based on absolute qHNMR quantification and in vivo zebrafish model-assisted activity index calculation, by which bioactive substance groups jointly responsible for the bioactivities in all fractions are pinpointed before any isolation effort. To differentiate origin-different botanical materials varying in the content of bioactive substance groups, principal component analysis, linear discriminant analysis, and hierarchical cluster analysis in conjunction with supervised support vector machine are employed to classify and predict production areas based on the detection of volatile organic compounds by E-nose and GC-MS. Expanding BAMLOC to Codonopsis Radix enables the identification of polyacetylenes and pyrrolidine alkaloids as the bioactive substance group for immune restoration effect and accurately determines the origins of plants. This study advances the toolbox for the discovery of bioactive compounds from complex mixtures and lays a more definitive foundation for the in-depth utilization of botanical materials.

一般来说,生物测定指导的分离和分离植物材料的生物活性成分往往以单一化合物的奖励结束。然而,植物性物质由于其化学成分固有的复杂性,通常通过多途径发挥其治疗作用。此外,植物材料中生物活性化合物的含量在很大程度上取决于湿度、温度、土壤,特别是地理来源,因此迫切需要快速准确地鉴定植物材料。这些长期存在的障碍共同阻碍了这些用途广泛的自然资源的深入开发和应用。为了应对这些挑战,研究人员开发了一种整合生物重力分析和机器学习驱动的起源分类(BAMLOC)的新范式。生物重量分析是基于绝对qHNMR定量和体内斑马鱼模型辅助活性指数计算,通过这种方法,在任何分离工作之前确定所有馏分中共同负责生物活性的生物活性物质组。为了区分不同产地植物药材中不同生物活性物质群含量的差异,采用主成分分析、线性判别分析、层次聚类分析和监督支持向量机相结合的方法,在电子鼻和气相色谱-质谱检测挥发物的基础上对产地进行分类和预测。将BAMLOC扩展到党参,可以识别聚乙炔和吡咯烷类生物碱作为免疫恢复作用的生物活性物质群,准确确定植物的起源。该研究完善了从复杂混合物中发现生物活性化合物的工具箱,为植物材料的深入利用奠定了更明确的基础。
{"title":"Integrating biogravimetric analysis and machine learning for systematic studies of botanical materials: From bioactive constituent identification to production area prediction.","authors":"Sinan Wang, Huiru Xiang, Xinyuan Pan, Jianyang Pan, Lu Zhao, Yi Wang, Shaoqing Cui, Yu Tang","doi":"10.1016/j.jpha.2025.101222","DOIUrl":"10.1016/j.jpha.2025.101222","url":null,"abstract":"<p><p>In general, bioassay-guided fractionation and isolation of bioactive constituents from botanical materials frequently ended up with the reward of a single compound. However, botanical materials typically exert their therapeutic actions through multi-pathway effects due to the intrinsic complex nature of chemical constituents. In addition, the content of bioactive compounds in botanical materials is largely dependent on humidity, temperature, soil, especially geographical origins, from which rapid and accurate identification of plant materials is pressingly needed. These long-standing obstacles collectively impede the deep exploitation and application of these versatile natural sources. To address the challenges, a new paradigm integrating biogravimetric analyses and machine learning-driven origin classification (BAMLOC) was developed. The biogravimetric analyses are based on absolute qHNMR quantification and <i>in vivo</i> zebrafish model-assisted activity index calculation, by which bioactive substance groups jointly responsible for the bioactivities in all fractions are pinpointed before any isolation effort. To differentiate origin-different botanical materials varying in the content of bioactive substance groups, principal component analysis, linear discriminant analysis, and hierarchical cluster analysis in conjunction with supervised support vector machine are employed to classify and predict production areas based on the detection of volatile organic compounds by E-nose and GC-MS. Expanding BAMLOC to Codonopsis Radix enables the identification of polyacetylenes and pyrrolidine alkaloids as the bioactive substance group for immune restoration effect and accurately determines the origins of plants. This study advances the toolbox for the discovery of bioactive compounds from complex mixtures and lays a more definitive foundation for the in-depth utilization of botanical materials.</p>","PeriodicalId":94338,"journal":{"name":"Journal of pharmaceutical analysis","volume":"15 10","pages":"101222"},"PeriodicalIF":8.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12616058/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145544829","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of pharmaceutical analysis
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1