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An analysis framework for Turing instability on multigraph networks from the perspective of optimization. 基于优化的多图网络图灵不稳定性分析框架。
IF 3.2 2区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2026-03-01 DOI: 10.1063/5.0316127
Wei Gou, Jianmeng Cui, Lili Chang, Guiquan Sun, Zhen Jin

The study of Turing patterns has been successfully extended from continuous media to single-layer and, more recently, multigraph networks. However, analyzing Turing instability in multigraph networks remains a challenge, as the existing approximate method relies on restrictive assumptions about dense-network connectivity. To address this limitation, we propose a novel least squares framework by reformulating the stability analysis as an optimization problem, leading to improved approximate conditions for Turing instability in multigraph networks. We validate our framework through numerical simulations, demonstrating its superior effectiveness, particularly in networks with Poisson degree distributions where prior methods fail. More than an analytical tool, this framework is leveraged to showcase how to design Laplacian spectra of a network family to drive Turing instability. Furthermore, we develop greedy algorithms for targeted modifications of edges to induce Turing instability. This work provides a versatile theoretical tool and opens new avenues for engineering pattern formation in multi-layer systems.

图灵模式的研究已经成功地从连续媒体扩展到单层网络,以及最近的多图网络。然而,分析多图网络中的图灵不稳定性仍然是一个挑战,因为现有的近似方法依赖于对密集网络连通性的限制性假设。为了解决这一限制,我们提出了一个新的最小二乘框架,通过将稳定性分析重新表述为优化问题,从而改进了多图网络中图灵不稳定性的近似条件。我们通过数值模拟验证了我们的框架,证明了其优越的有效性,特别是在具有泊松度分布的网络中,先前的方法失败了。这个框架不仅仅是一个分析工具,还被用来展示如何设计网络族的拉普拉斯谱来驱动图灵不稳定性。此外,我们还开发了贪心算法,用于有针对性地修改边缘以诱导图灵不稳定性。这项工作提供了一个通用的理论工具,并为多层系统的工程模式形成开辟了新的途径。
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引用次数: 0
Aubry's impacts on mathematics. 奥布里对数学的影响。
IF 3.2 2区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2026-03-01 DOI: 10.1063/5.0301817
Jinxin Xue

This paper surveys the profound impact of Serge Aubry's work on mathematics, particularly in Hamiltonian dynamical systems. We trace the historical development from Newtonian mechanics through the Kolmogorov-Arnold-Moser theory to Aubry's groundbreaking contributions to the Aubry-Mather theory, Aubry-André duality, anti-integrability, and their applications across physics and mathematics.

本文综述了塞尔日·奥布里的工作对数学的深远影响,特别是在哈密顿动力系统方面。我们追溯了从牛顿力学到Kolmogorov-Arnold-Moser理论的历史发展,到奥布里对奥布里-马瑟理论、奥布里-安德烈对偶、反可积分性的开创性贡献,以及它们在物理和数学中的应用。
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引用次数: 0
Chaotic stochastic resonance in Mackey-Glass equations. 麦基-格拉斯方程中的混沌随机共振。
IF 3.2 2区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2026-03-01 DOI: 10.1063/5.0310630
Eiki Kojima, Yuzuru Sato

Stochastic resonance (SR) manifests as switching dynamics between two quasi-stationary states in the stochastic Mackey-Glass equation. We identify chaotic SR, arising from the coexistence of resonance and chaos in stochastic dynamics. In contrast to classical SR, which is described by a random point attractor with a negative largest Lyapunov exponent, chaotic SR is described by a random strange attractor with a positive largest Lyapunov exponent. We observe chaotic SR in the Mackey-Glass equation as well as chaotic SR in the Duffing equation and the underdamped FitzHugh-Nagumo equation, demonstrating the universality of this phenomenon across a broad class of strongly nonlinear random dynamical systems.

随机共振(SR)表现为随机Mackey-Glass方程中两个准稳态之间的切换动力学。混沌SR是随机动力学中共振和混沌共存的结果。与经典SR由具有负最大Lyapunov指数的随机点吸引子描述不同,混沌SR由具有正最大Lyapunov指数的随机奇异吸引子描述。我们在Mackey-Glass方程中观察到混沌SR,在Duffing方程和欠阻尼FitzHugh-Nagumo方程中也观察到混沌SR,证明了这种现象在广泛的强非线性随机动力系统中的普遍性。
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引用次数: 0
Neutral species facilitate coexistence among cyclically competing species under birth and death processes. 在生灭过程中,中性物种促进了周期性竞争物种之间的共存。
IF 3.2 2区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2026-03-01 DOI: 10.1063/5.0324760
Yikang Lu, Wenhao She, Xiaofang Duan, Junpyo Park

Natural birth and death are fundamental mechanisms of population dynamics in ecosystems and have played pivotal roles in shaping population dynamics. Nevertheless, in studies of cyclic competition systems governed by the rock-paper-scissors (RPS) game, these mechanisms have often been ignored in analyses of biodiversity. On the other hand, given the prevalence and profound impact on biodiversity, understanding how higher-order interactions (HOIs) can affect biodiversity is one of the most challenging issues, and thus, HOIs have been continuously studied for their effects on biodiversity in systems of cyclic competing populations, with a focus on neutral species. However, in real ecosystems, species can evolve and die naturally or be preyed upon by predators, whereas previous studies have considered only classic reaction rules among three species with a neutral, nonparticipant species. To identify how neutral species can affect the biodiversity of the RPS system when species' natural birth and death are assumed, we consider a model of neutral species in higher-order interactions within the spatial RPS system, assuming birth and death processes. Extensive simulations show that when neutral species interfere positively, they dominate the available space, thereby reducing the proportion of other species. Conversely, when the interference is harmful, the density of competing species increases. In addition, unlike traditional RPS dynamics, biodiversity can be effectively maintained even in high-mobility regimes. Our study reaffirms the critical role of neutral species in preserving biodiversity.

自然出生和死亡是生态系统中种群动态的基本机制,在形成种群动态中起着关键作用。然而,在由石头剪刀布(RPS)游戏控制的循环竞争系统的研究中,这些机制在生物多样性分析中经常被忽略。另一方面,考虑到高阶相互作用对生物多样性的普遍影响和深远影响,了解高阶相互作用如何影响生物多样性是最具挑战性的问题之一,因此,高阶相互作用对循环竞争种群系统中生物多样性的影响一直被研究,重点是中性物种。然而,在真实的生态系统中,物种可以自然进化和死亡,或者被捕食者捕食,而之前的研究只考虑了三个物种之间的经典反应规则,以及一个中立的、不参与的物种。为了确定在假设物种自然出生和死亡的情况下,中性物种如何影响RPS系统的生物多样性,我们考虑了一个假设物种出生和死亡过程的空间RPS系统中高阶相互作用的中性物种模型。大量的模拟表明,当中性物种积极干预时,它们占据了可用空间,从而减少了其他物种的比例。相反,当干扰是有害的,竞争物种的密度增加。此外,与传统的RPS动态不同,即使在高流动性制度下,生物多样性也可以有效地维持。我们的研究重申了中性物种在保护生物多样性中的关键作用。
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引用次数: 0
Spectral and dynamical properties of the fractional nonlinear Schrödinger equation under harmonic confinement. 谐波约束下分数阶非线性Schrödinger方程的谱和动力学性质。
IF 3.2 2区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2026-03-01 DOI: 10.1063/5.0307515
R Kusdiantara, M F Adhari, H A Mardi, I W Sudiarta, H Susanto

We investigate the spectral and dynamical properties of the fractional nonlinear Schrödinger equation with harmonic confinement. In this setting, the classical Laplacian is replaced by its fractional power (-∂x2)α/2 with α∈(1,2], introducing nonlocal, Lévy-type dispersion. This modification fundamentally alters the balance between nonlinearity, dispersion, and trapping, reshaping both the structure and stability of stationary states. Using a Fourier pseudo-spectral discretization, we compute stationary branches as functions of the temporal frequency Ω in focusing (σ=+1) and defocusing (σ=-1) regimes, and assess spectral stability via the linearized eigenvalue problem. Direct simulations, performed with split-step and exponential time-differencing integrators, confirm these predictions and reveal α-dependent transitions between coherent oscillations, bounded breathing dynamics, and decoherence or fragmentation. Our results show that decreasing α systematically shifts bifurcation curves, fragments stability windows for excited states, and amplifies instability in the focusing regime, while supporting robust coherence in the defocusing case. Beyond clarifying how harmonic confinement mediates the interplay between nonlinearity and fractional dispersion, the study also provides benchmarks for numerical treatments of fractional operators and points toward potential applications in nonlinear optics, Bose-Einstein condensates, and anomalous transport phenomena.

研究了具有谐波约束的分数阶非线性Schrödinger方程的谱和动力学性质。在这种情况下,经典拉普拉斯函数被它的分数次方(-∂x2)α/2 (α∈(1,2))取代,引入了非局部的l型色散。这种修正从根本上改变了非线性、色散和俘获之间的平衡,重塑了稳态的结构和稳定性。在聚焦(σ=+1)和离焦(σ=-1)两种情况下,采用傅立叶伪谱离散化方法计算平稳分支作为时间频率Ω的函数,并通过线性化特征值问题评估谱的稳定性。用分步和指数时差积分器进行的直接模拟证实了这些预测,并揭示了相干振荡、有界呼吸动力学和退相干或碎片之间的α依赖转换。我们的研究结果表明,α的降低系统地改变了分岔曲线,破坏了激发态的稳定窗口,放大了聚焦区的不稳定性,同时支持了散焦情况下的鲁棒相干性。除了阐明谐波约束如何介导非线性和分数色散之间的相互作用之外,该研究还为分数算子的数值处理提供了基准,并指出了非线性光学、玻色-爱因斯坦凝聚和异常输运现象的潜在应用。
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引用次数: 0
Emergent dynamics in heterogeneous pulsatile swarmalators. 非均质脉动小虫的涌现动力学。
IF 3.2 2区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2026-03-01 DOI: 10.1063/5.0316053
Samali Ghosh, Kevin O'Keeffe, Dibakar Ghosh

We study a variant of the one-dimensional swarmalator model where the phase dynamics are pulsatile, governed by a phase-response curve and a pulse function, similar to the Winfree model of regular oscillators. Previously, we studied the idealized case where the individual swarmalators were identical; we generalize this to the more realistic case of non-identical swarmalators, where the natural frequencies are randomly distributed. We find that this heterogeneity leads to new kinds of collective dynamics. These states may be observable in groups of Japanese Tree frogs, circularly confined sperm, or other types of real-world swarmalators.

我们研究了一维swarmalator模型的一种变体,其中相位动力学是脉动的,由相位响应曲线和脉冲函数控制,类似于规则振子的Winfree模型。之前,我们研究了个体相同的理想情况;我们将其推广到更现实的非相同群集的情况,其中固有频率是随机分布的。我们发现这种异质性导致了一种新的集体动力。这些状态可以在日本树蛙群体、圆形限制精子或其他类型的现实世界的群集动物中观察到。
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引用次数: 0
Geometry and efficiency of learned and reservoir recurrent dynamics in context-dependent integration-switching. 基于环境的集成转换中学习和油藏循环动力学的几何和效率。
IF 3.2 2区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2026-03-01 DOI: 10.1063/5.0320077
Oleg V Maslennikov

The computational strategy of recurrent neural networks (RNNs) is encoded in the geometry of their state-space dynamics. We investigate the fundamental differences between two dominant paradigms: fixed-reservoir computing and end-to-end trainable RNNs. On a canonical context-dependent integration task, we systematically compare echo-state networks, gated recurrent units, long short-term memory networks, and simplified linear models. We find that trainable RNNs consistently achieve superior accuracy with significantly fewer parameters. Using methods from dynamical systems and manifold analysis, we uncover the mechanism for this efficiency: trainable networks learn to sculpt their internal dynamics, creating low-dimensional, geometrically organized manifolds that are aligned with the task's computational requirements. In contrast, fixed reservoirs rely on a high-dimensional, entangled representation that is less efficient. These findings, supported by intrinsic dimensionality and spectral analysis, demonstrate that learning to distill task structure into a compact, minimal realization is a hallmark of efficient recurrent computation and connects theoretical principles of universality with biological observations of neural remapping.

递归神经网络(RNNs)的计算策略被编码为其状态空间动力学的几何结构。我们研究了两种主要范式之间的根本差异:固定库计算和端到端可训练rnn。在一个典型的上下文相关的整合任务中,我们系统地比较了回声状态网络、门控循环单元、长短期记忆网络和简化的线性模型。我们发现,可训练的rnn在参数显著减少的情况下始终能够达到更高的精度。使用来自动力系统和流形分析的方法,我们揭示了这种效率的机制:可训练网络学习塑造其内部动力学,创建与任务计算要求一致的低维几何组织流形。相比之下,固定存储库依赖于高维、纠缠的表示,效率较低。这些发现得到了内在维数和谱分析的支持,表明学习将任务结构提取成一个紧凑的、最小的实现是高效循环计算的标志,并将普适性的理论原则与神经重映射的生物学观察联系起来。
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引用次数: 0
Decision-making under negativity bias: Double hysteresis in the opinion-dependent q-voter model. 负性偏见下的决策:意见依赖q-voter模型的双重滞后。
IF 3.2 2区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2026-03-01 DOI: 10.1063/5.0312766
Maciej Doniec, Katarzyna Sznajd-Weron, Federico Vazquez

Negative information often exerts a disproportionately strong impact on human decision-making, a phenomenon known as the negativity bias. In behavioral economics, this effect is formally captured by prospect theory, which posits that losses loom larger than equivalent gains. For example, a single negative product review can outweigh numerous positive ones, reflecting this principle of loss aversion in consumer behavior. While this psychological effect has been widely documented, its implications for collective opinion dynamics, critical for understanding market stability and reputation dynamics, remain poorly understood. Here, we generalize the q-voter model with independence by introducing opinion-dependent influence group sizes, q+ and q-, which represent the social reinforcement needed to change an opinion from negative to positive and from positive to negative, respectively. We study two versions of this asymmetric model: a baseline model that reduces to the standard q-voter model when q+=q-=q and an extended model that incorporates an additional asymmetry expressed as a preference for one opinion. In its reduced version, this represents a minimal model in terms of non-linearity within the q-voter framework that allows for discontinuous phase transitions and hysteresis. Using mean-field analysis and computer simulations, we show that these modifications lead to rich collective behaviors, including double hysteresis, one form of which is irreversible, providing a mechanism for path-dependence and the sustained, irrecoverable damage to collective sentiment, brand equity, or market confidence.

负面信息往往对人类的决策产生不成比例的强烈影响,这种现象被称为消极偏见。在行为经济学中,这种效应被前景理论正式捕获,该理论假定损失比同等收益更大。例如,一个负面的产品评论可能会超过许多正面的评论,这反映了消费者行为中的损失厌恶原则。虽然这种心理效应已被广泛记录,但它对理解市场稳定性和声誉动态至关重要的集体意见动态的影响仍然知之甚少。在这里,我们通过引入意见依赖的影响群体大小q+和q-来推广具有独立性的q-voter模型,q+和q-分别代表将意见从消极转变为积极和从积极转变为消极所需的社会强化。我们研究了这种不对称模型的两个版本:一个基线模型,当q+=q-=q时简化为标准q-voter模型,另一个扩展模型包含了额外的不对称,表示为对一种意见的偏好。在其简化版本中,这代表了q-voter框架中允许不连续相变和滞后的非线性方面的最小模型。通过平均场分析和计算机模拟,我们发现这些变化导致了丰富的集体行为,包括双滞后,其中一种形式是不可逆的,为路径依赖和对集体情绪、品牌资产或市场信心的持续、不可恢复的损害提供了机制。
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引用次数: 0
Feynman-Kac equation for microtubule search process in prometaphase. 前期微管搜索过程的Feynman-Kac方程。
IF 3.2 2区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2026-03-01 DOI: 10.1063/5.0305406
Heng Wang, Yayun Xue, Weihua Deng

In prometaphase, microtubules form the spindle structure through dynamic instability, accurately locating and capturing chromosomes to ensure the equal distribution of genetic material (DNA on chromosomes). In this paper, we establish a dynamic model of the microtubule growth-rotation search process by considering the non-local polymerization and depolymerization of microtubules affected by mechanisms such as katanin proteins and kinetochore fibers and derive the macroscopic equation for the microtubule-kinetochore capture model by imposing appropriate boundary conditions. Furthermore, we derive the Feynman-Kac equations that govern the probability density of the functional for the microtubule growth-rotation search model. Finally, we validate the derived equations by comparing results from using a deep learning method to solve the equations with those from applying Monte Carlo simulations to the microscopic models.

在前中期,微管通过动态不稳定形成纺锤体结构,准确定位和捕获染色体,保证遗传物质(染色体上的DNA)的均匀分布。本文通过考虑角朊蛋白和着丝点纤维等机制对微管非局部聚合和解聚的影响,建立了微管生长-旋转搜索过程的动态模型,并通过施加适当的边界条件推导了微管-着丝点捕获模型的宏观方程。此外,我们还推导了微管生长-旋转搜索模型泛函概率密度的Feynman-Kac方程。最后,我们通过比较使用深度学习方法求解方程的结果与应用蒙特卡罗模拟微观模型的结果来验证导出的方程。
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引用次数: 0
Prediction performance of random reservoirs with different topology for nonlinear dynamical systems with different number of degrees of freedom. 不同拓扑结构随机储层对不同自由度非线性动力系统的预测性能。
IF 3.2 2区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2026-03-01 DOI: 10.1063/5.0314081
Shailendra K Rathor, Lina Jaurigue, Martin Ziegler, Jörg Schumacher

Reservoir computing (RC) is a powerful framework for predicting the temporal evolution of variables of nonlinear dynamical systems, yet the role of reservoir topology-particularly symmetry in connectivity and weights-remains not adequately understood. This work investigates how the structure of the reservoir network influences the performance of RC on time series prediction tasks derived from four dynamical systems of increasing complexity: the Mackey-Glass system with delayed-feedback, two nonlinear models of two-dimensional thermal convection flows, and a three-dimensional shear flow model exhibiting transition to turbulence. Using five reservoir topologies in which connectivity patterns and edge weights are controlled independently, we evaluate both direct- and cross-prediction tasks. The results show that symmetric reservoir networks improve prediction accuracy for the convection-based systems when the input dimension is smaller than the number of degrees of freedom. In contrast, the shear-flow model displays almost no sensitivity to topological symmetry due to its strongly chaotic high-dimensional dynamics. These findings reveal how structural properties of reservoir networks affect their ability to learn complex dynamics and provide guidance for designing more effective RC architectures.

储层计算(RC)是预测非线性动力系统变量时间演化的一个强大框架,但储层拓扑的作用,特别是连通性和权重的对称性,仍然没有得到充分的理解。这项工作研究了水库网络的结构如何影响RC在时间序列预测任务中的性能,这些预测任务来自四个日益复杂的动力系统:具有延迟反馈的Mackey-Glass系统,两个二维热对流的非线性模型,以及一个向湍流过渡的三维剪切流模型。使用五种独立控制连通性模式和边权的油藏拓扑,我们评估了直接和交叉预测任务。结果表明,当输入维数小于自由度数时,对称水库网络提高了基于对流系统的预测精度。而剪切流模型由于具有强混沌的高维动力学特性,对拓扑对称性几乎不敏感。这些发现揭示了水库网络的结构特性如何影响它们学习复杂动力学的能力,并为设计更有效的RC结构提供了指导。
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引用次数: 0
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Chaos
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